sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | ampliconnoise 1.29-8 (armel) Tue, 08 Oct 2019 02:13:15 +0000 | +==============================================================================+ Package: ampliconnoise Version: 1.29-8 Source Version: 1.29-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-c3db6b96-5e5b-4d5c-a795-9fb98f52550b' with '<>' I: NOTICE: Log filtering will replace 'build/ampliconnoise-qe09gW/resolver-oWr5kE' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-10-07-0811.54.pdiff [6394 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-10-07-1412.38.pdiff [16.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-10-07-2019.07.pdiff [9843 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-10-07-0811.54.pdiff [54.4 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-10-07-1412.38.pdiff [11.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-10-07-2019.07.pdiff [9843 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-10-07-2019.07.pdiff [24.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-10-07-2019.07.pdiff [24.1 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armel Packages [7909 kB] Fetched 8225 kB in 2s (4316 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: liblz4-1 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 56.5 kB of archives. After this operation, 7168 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 liblz4-1 amd64 1.9.1-2 [56.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 56.5 kB in 0s (0 B/s) (Reading database ... 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Processing triggers for libc-bin (2.29-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'ampliconnoise' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ampliconnoise.git Please use: git clone https://salsa.debian.org/med-team/ampliconnoise.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1414 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main ampliconnoise 1.29-8 (dsc) [2045 B] Get:2 http://debian.oregonstate.edu/debian unstable/main ampliconnoise 1.29-8 (tar) [1403 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main ampliconnoise 1.29-8 (diff) [8796 B] Fetched 1414 kB in 0s (37.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/ampliconnoise-qe09gW/ampliconnoise-1.29' with '<>' I: NOTICE: Log filtering will replace 'build/ampliconnoise-qe09gW' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), libgsl-dev, libopenmpi-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper (>= 11~), libgsl-dev, libopenmpi-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [412 B] Get:5 copy:/<>/apt_archive ./ Packages [501 B] Fetched 1870 B in 0s (111 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base ibverbs-providers:armel intltool-debian libarchive-zip-perl libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbsd0 libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libevent-2.1-6:armel libevent-core-2.1-6:armel libevent-pthreads-2.1-6:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc1:armel libgcc1-armel-cross libgfortran5:armel libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgsl-dev:armel libgsl23:armel libgslcblas0:armel libgssapi-krb5-2 libhwloc-dev:armel libhwloc-plugins:armel libhwloc5:armel libibverbs-dev:armel libibverbs1:armel libicu63 libicu63:armel libio-string-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblocale-gettext-perl libltdl-dev:armel libltdl7:armel liblzma5:armel libmagic-mgc libmagic1 libncurses6 libnl-3-200:armel libnl-3-dev:armel libnl-route-3-200:armel libnl-route-3-dev:armel libopenmpi-dev:armel libopenmpi3:armel libpciaccess0:armel libpipeline1 libpmix2:armel libsigsegv2 libssl1.1 libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armel libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db ocl-icd-libopencl1:armel openmpi-bin:armel openmpi-common openssh-client po-debconf sensible-utils ucf zlib1g:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch gcc-9-doc libstdc++6-9-dbg-armel-cross libgcc1-dbg-armel-cross libgomp1-dbg-armel-cross libitm1-dbg-armel-cross libatomic1-dbg-armel-cross libasan5-dbg-armel-cross liblsan0-dbg-armel-cross libtsan0-dbg-armel-cross libubsan1-dbg-armel-cross libquadmath0-dbg-armel-cross manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel manpages-dev:armel gsl-ref-psdoc:armel | gsl-doc-pdf:armel | gsl-doc-info:armel | gsl-ref-html:armel krb5-doc krb5-user libhwloc-contrib-plugins:armel libtool-doc:armel openmpi-doc:armel pciutils:armel libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser opencl-icd:armel gfortran:armel | fortran-compiler:armel keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 libcoarrays-openmpi-dev:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl xauth libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base ibverbs-providers:armel intltool-debian libarchive-zip-perl libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbsd0 libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libevent-2.1-6:armel libevent-core-2.1-6:armel libevent-pthreads-2.1-6:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc1:armel libgcc1-armel-cross libgfortran5:armel libglib2.0-0 libgomp1:armel libgomp1-armel-cross libgsl-dev:armel libgsl23:armel libgslcblas0:armel libgssapi-krb5-2 libhwloc-dev:armel libhwloc-plugins:armel libhwloc5:armel libibverbs-dev:armel libibverbs1:armel libicu63 libicu63:armel libio-string-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblocale-gettext-perl libltdl-dev:armel libltdl7:armel liblzma5:armel libmagic-mgc libmagic1 libncurses6 libnl-3-200:armel libnl-3-dev:armel libnl-route-3-200:armel libnl-route-3-dev:armel libopenmpi-dev:armel libopenmpi3:armel libpciaccess0:armel libpipeline1 libpmix2:armel libsigsegv2 libssl1.1 libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:armel libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db ocl-icd-libopencl1:armel openmpi-bin:armel openmpi-common openssh-client po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel 0 upgraded, 123 newly installed, 0 to remove and 0 not upgraded. Need to get 81.7 MB of archives. After this operation, 319 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.7-3 [1300 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b5 [18.9 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.2.1-8 [193 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-5 [253 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-5 [119 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-5 [67.1 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libedit2 amd64 3.1-20190324-1 [94.3 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-1 [1533 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 openssh-client amd64 1:8.0p1-7 [808 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.32.51.20190909-1 [2721 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi-base amd64 9.2.1-8cross1 [193 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabi amd64 9.2.1-8cross1 [6809 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:9.2.1-3.1 [16.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-8cross1 [188 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.29-1cross7 [1139 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armel-cross all 1:9.2.1-8cross1 [39.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 9.2.1-8cross1 [74.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 9.2.1-8cross1 [8932 B] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 9.2.1-8cross1 [340 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 9.2.1-8cross1 [376 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 9.2.1-8cross1 [110 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armel-cross all 9.2.1-8cross1 [640 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi amd64 9.2.1-8cross1 [7143 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1464 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.2.9-2cross7 [1312 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.29-1cross7 [2155 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armel-cross all 9.2.1-8cross1 [1705 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabi amd64 9.2.1-8cross1 [7387 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1180 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.66-2 [103 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.0-1 [23.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.0-1 [14.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-1 [81.8 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.6.1 [172 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.1-1 [1317 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20190803-1 [102 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.6.1 [993 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main armel libgcc1 armel 1:9.2.1-8 [39.0 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.29-2 [2349 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armel libnl-3-200 armel 3.4.0-1+b1 [55.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armel libnl-route-3-200 armel 3.4.0-1+b1 [134 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main armel libibverbs1 armel 24.0-2 [44.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armel ibverbs-providers armel 24.0-2 [21.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.2.1-8 [346 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 9.2.1-8 [9080 B] Get:91 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.2.17-1+b1 [1232 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.29-2 [2196 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armel libevent-2.1-6 armel 2.1.8-stable-4 [159 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armel libevent-core-2.1-6 armel 2.1.8-stable-4 [118 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armel libevent-pthreads-2.1-6 armel 2.1.8-stable-4 [47.6 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 9.2.1-8 [76.7 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 9.2.1-8 [415 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 9.2.1-8 [111 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.2.1-8 [646 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armel libgfortran5 armel 9.2.1-8 [246 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armel libgslcblas0 armel 2.5+dfsg-6+b1 [124 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armel libgsl23 armel 2.5+dfsg-6+b1 [854 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armel libgsl-dev armel 2.5+dfsg-6+b1 [1078 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armel libltdl7 armel 2.4.6-11 [387 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armel libhwloc5 armel 1.11.13-1 [88.6 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armel libltdl-dev armel 2.4.6-11 [160 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armel libhwloc-dev armel 1.11.13-1 [153 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-1+b1 [84.7 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armel libpciaccess0 armel 0.14-1 [50.9 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel libicu63 armel 63.2-2 [7979 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel liblzma5 armel 5.2.4-1+b1 [144 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armel libxml2 armel 2.9.4+dfsg1-7+b3 [572 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel ocl-icd-libopencl1 armel 2.2.12-2 [36.3 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armel libhwloc-plugins armel 1.11.13-1 [17.3 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armel libnl-3-dev armel 3.4.0-1+b1 [97.1 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armel libnl-route-3-dev armel 3.4.0-1+b1 [158 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armel libibverbs-dev armel 24.0-2 [157 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armel libpmix2 armel 3.1.4-1 [440 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armel libopenmpi3 armel 3.1.3-11 [1828 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 openmpi-common all 3.1.3-11 [165 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armel openmpi-bin armel 3.1.3-11 [200 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armel libopenmpi-dev armel 3.1.3-11 [963 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.2.1-8 [1737 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 81.7 MB in 2s (35.6 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14991 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.7-3_amd64.deb ... Unpacking man-db (2.8.7-3) ... 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Preparing to unpack .../085-libibverbs1_24.0-2_armel.deb ... Unpacking libibverbs1:armel (24.0-2) ... Selecting previously unselected package ibverbs-providers:armel. Preparing to unpack .../086-ibverbs-providers_24.0-2_armel.deb ... Unpacking ibverbs-providers:armel (24.0-2) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../087-libasan5_9.2.1-8_armel.deb ... Unpacking libasan5:armel (9.2.1-8) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../088-libatomic1_9.2.1-8_armel.deb ... Unpacking libatomic1:armel (9.2.1-8) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../089-linux-libc-dev_5.2.17-1+b1_armel.deb ... Unpacking linux-libc-dev:armel (5.2.17-1+b1) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../090-libc6-dev_2.29-2_armel.deb ... Unpacking libc6-dev:armel (2.29-2) ... Selecting previously unselected package libevent-2.1-6:armel. 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Unpacking libubsan1:armel (9.2.1-8) ... Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../097-libgcc-9-dev_9.2.1-8_armel.deb ... Unpacking libgcc-9-dev:armel (9.2.1-8) ... Selecting previously unselected package libgfortran5:armel. Preparing to unpack .../098-libgfortran5_9.2.1-8_armel.deb ... Unpacking libgfortran5:armel (9.2.1-8) ... Selecting previously unselected package libgslcblas0:armel. Preparing to unpack .../099-libgslcblas0_2.5+dfsg-6+b1_armel.deb ... Unpacking libgslcblas0:armel (2.5+dfsg-6+b1) ... Selecting previously unselected package libgsl23:armel. Preparing to unpack .../100-libgsl23_2.5+dfsg-6+b1_armel.deb ... Unpacking libgsl23:armel (2.5+dfsg-6+b1) ... Selecting previously unselected package libgsl-dev:armel. Preparing to unpack .../101-libgsl-dev_2.5+dfsg-6+b1_armel.deb ... Unpacking libgsl-dev:armel (2.5+dfsg-6+b1) ... Selecting previously unselected package libltdl7:armel. Preparing to unpack .../102-libltdl7_2.4.6-11_armel.deb ... Unpacking libltdl7:armel (2.4.6-11) ... Selecting previously unselected package libhwloc5:armel. Preparing to unpack .../103-libhwloc5_1.11.13-1_armel.deb ... Unpacking libhwloc5:armel (1.11.13-1) ... Selecting previously unselected package libltdl-dev:armel. Preparing to unpack .../104-libltdl-dev_2.4.6-11_armel.deb ... Unpacking libltdl-dev:armel (2.4.6-11) ... Selecting previously unselected package libhwloc-dev:armel. Preparing to unpack .../105-libhwloc-dev_1.11.13-1_armel.deb ... Unpacking libhwloc-dev:armel (1.11.13-1) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../106-zlib1g_1%3a1.2.11.dfsg-1+b1_armel.deb ... Unpacking zlib1g:armel (1:1.2.11.dfsg-1+b1) ... Selecting previously unselected package libpciaccess0:armel. Preparing to unpack .../107-libpciaccess0_0.14-1_armel.deb ... Unpacking libpciaccess0:armel (0.14-1) ... Selecting previously unselected package libicu63:armel. Preparing to unpack .../108-libicu63_63.2-2_armel.deb ... Unpacking libicu63:armel (63.2-2) ... Selecting previously unselected package liblzma5:armel. Preparing to unpack .../109-liblzma5_5.2.4-1+b1_armel.deb ... Unpacking liblzma5:armel (5.2.4-1+b1) ... Selecting previously unselected package libxml2:armel. Preparing to unpack .../110-libxml2_2.9.4+dfsg1-7+b3_armel.deb ... Unpacking libxml2:armel (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package ocl-icd-libopencl1:armel. Preparing to unpack .../111-ocl-icd-libopencl1_2.2.12-2_armel.deb ... Unpacking ocl-icd-libopencl1:armel (2.2.12-2) ... Selecting previously unselected package libhwloc-plugins:armel. Preparing to unpack .../112-libhwloc-plugins_1.11.13-1_armel.deb ... Unpacking libhwloc-plugins:armel (1.11.13-1) ... Selecting previously unselected package libnl-3-dev:armel. Preparing to unpack .../113-libnl-3-dev_3.4.0-1+b1_armel.deb ... Unpacking libnl-3-dev:armel (3.4.0-1+b1) ... Selecting previously unselected package libnl-route-3-dev:armel. Preparing to unpack .../114-libnl-route-3-dev_3.4.0-1+b1_armel.deb ... Unpacking libnl-route-3-dev:armel (3.4.0-1+b1) ... Selecting previously unselected package libibverbs-dev:armel. Preparing to unpack .../115-libibverbs-dev_24.0-2_armel.deb ... Unpacking libibverbs-dev:armel (24.0-2) ... Selecting previously unselected package libpmix2:armel. Preparing to unpack .../116-libpmix2_3.1.4-1_armel.deb ... Unpacking libpmix2:armel (3.1.4-1) ... Selecting previously unselected package libopenmpi3:armel. Preparing to unpack .../117-libopenmpi3_3.1.3-11_armel.deb ... Unpacking libopenmpi3:armel (3.1.3-11) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../118-openmpi-common_3.1.3-11_all.deb ... Unpacking openmpi-common (3.1.3-11) ... Selecting previously unselected package openmpi-bin:armel. Preparing to unpack .../119-openmpi-bin_3.1.3-11_armel.deb ... Unpacking openmpi-bin:armel (3.1.3-11) ... Selecting previously unselected package libopenmpi-dev:armel. Preparing to unpack .../120-libopenmpi-dev_3.1.3-11_armel.deb ... Unpacking libopenmpi-dev:armel (3.1.3-11) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../121-libstdc++-9-dev_9.2.1-8_armel.deb ... Unpacking libstdc++-9-dev:armel (9.2.1-8) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../122-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up binutils-arm-linux-gnueabi (2.32.51.20190909-1) ... Setting up libmagic-mgc (1:5.37-5) ... Setting up libarchive-zip-perl (1.66-2) ... Setting up libglib2.0-0:amd64 (2.62.1-1) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-1) ... Setting up libdebhelper-perl (12.6.1) ... Setting up libmagic1:amd64 (1:5.37-5) ... Setting up linux-libc-dev:armel (5.2.17-1+b1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.37-5) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libkrb5support0:amd64 (1.17-6) ... Setting up linux-libc-dev-armel-cross (5.2.9-2cross7) ... Setting up gcc-9-arm-linux-gnueabi-base:amd64 (9.2.1-8cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libncurses6:amd64 (6.1+20190803-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up cpp-9-arm-linux-gnueabi (9.2.1-8cross1) ... Setting up autopoint (0.19.8.1-9) ... Setting up gcc-9-cross-base (9.2.1-8cross1) ... Setting up libk5crypto3:amd64 (1.17-6) ... Setting up libc6-armel-cross (2.29-1cross7) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up openmpi-common (3.1.3-11) ... Setting up libsub-override-perl (0.09-2) ... Setting up libkrb5-3:amd64 (1.17-6) ... Setting up libc6-dev-armel-cross (2.29-1cross7) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b5) ... Setting up gcc-9-base:armel (9.2.1-8) ... Setting up libfile-stripnondeterminism-perl (1.6.0-1) ... Setting up libgomp1-armel-cross (9.2.1-8cross1) ... Setting up libtool (2.4.6-11) ... Setting up libedit2:amd64 (3.1-20190324-1) ... Setting up m4 (1.4.18-2) ... Setting up libatomic1-armel-cross (9.2.1-8cross1) ... Setting up libgcc1-armel-cross (1:9.2.1-8cross1) ... Setting up libasan5-armel-cross (9.2.1-8cross1) ... Setting up cpp-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.13-1) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up openssh-client (1:8.0p1-7) ... Setting up libstdc++6-armel-cross (9.2.1-8cross1) ... Setting up man-db (2.8.7-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libubsan1-armel-cross (9.2.1-8cross1) ... Setting up libgcc-9-dev-armel-cross (9.2.1-8cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up po-debconf (1.0.21) ... Setting up libstdc++-9-dev-armel-cross (9.2.1-8cross1) ... Setting up gcc-9-arm-linux-gnueabi (9.2.1-8cross1) ... Setting up g++-9-arm-linux-gnueabi (9.2.1-8cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armel (12.8) ... Setting up dh-autoreconf (19) ... Setting up libc6:armel (2.29-2) ... Setting up ocl-icd-libopencl1:armel (2.2.12-2) ... Setting up libnl-3-200:armel (3.4.0-1+b1) ... Setting up libc6-dev:armel (2.29-2) ... Setting up liblzma5:armel (5.2.4-1+b1) ... Setting up libgcc1:armel (1:9.2.1-8) ... Setting up debhelper (12.6.1) ... Setting up zlib1g:armel (1:1.2.11.dfsg-1+b1) ... Setting up libgomp1:armel (9.2.1-8) ... Setting up libnl-route-3-200:armel (3.4.0-1+b1) ... Setting up libasan5:armel (9.2.1-8) ... Setting up libatomic1:armel (9.2.1-8) ... Setting up libltdl7:armel (2.4.6-11) ... Setting up libevent-core-2.1-6:armel (2.1.8-stable-4) ... Setting up libgfortran5:armel (9.2.1-8) ... Setting up libevent-2.1-6:armel (2.1.8-stable-4) ... Setting up dh-strip-nondeterminism (1.6.0-1) ... Setting up libnl-3-dev:armel (3.4.0-1+b1) ... Setting up libstdc++6:armel (9.2.1-8) ... Setting up libevent-pthreads-2.1-6:armel (2.1.8-stable-4) ... Setting up libpciaccess0:armel (0.14-1) ... Setting up libibverbs1:armel (24.0-2) ... Setting up libgslcblas0:armel (2.5+dfsg-6+b1) ... Setting up ibverbs-providers:armel (24.0-2) ... Setting up libhwloc5:armel (1.11.13-1) ... Setting up libicu63:armel (63.2-2) ... Setting up libnl-route-3-dev:armel (3.4.0-1+b1) ... Setting up libltdl-dev:armel (2.4.6-11) ... Setting up libgsl23:armel (2.5+dfsg-6+b1) ... Setting up libubsan1:armel (9.2.1-8) ... Setting up libhwloc-dev:armel (1.11.13-1) ... Setting up libxml2:armel (2.9.4+dfsg1-7+b3) ... Setting up libgsl-dev:armel (2.5+dfsg-6+b1) ... Setting up libibverbs-dev:armel (24.0-2) ... Setting up libhwloc-plugins:armel (1.11.13-1) ... Setting up libgcc-9-dev:armel (9.2.1-8) ... Setting up libstdc++-9-dev:armel (9.2.1-8) ... Setting up libpmix2:armel (3.1.4-1) ... Setting up libopenmpi3:armel (3.1.3-11) ... Setting up openmpi-bin:armel (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:armel (3.1.3-11) ... update-alternatives: using /usr/lib/arm-linux-gnueabi/openmpi/include to provide /usr/include/arm-linux-gnueabi/mpi (mpi-arm-linux-gnueabi) in auto mode Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.29-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.32.51.20190909-1 dpkg-dev_1.19.7 g++-8_8.3.0-23 g++-9_9.2.1-8 gcc-8_8.3.0-23 gcc-9_9.2.1-8 libc6-dev_2.29-2 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-8 libstdc++-9-dev-armel-cross_9.2.1-8cross1 libstdc++6_9.2.1-8 libstdc++6-armel-cross_9.2.1-8cross1 linux-libc-dev_5.2.17-1+b1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.32.51.20190909-1 binutils-arm-linux-gnueabi_2.32.51.20190909-1 binutils-common_2.32.51.20190909-1 binutils-x86-64-linux-gnu_2.32.51.20190909-1 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-23 cpp-9_9.2.1-8 cpp-9-arm-linux-gnueabi_9.2.1-8cross1 cpp-arm-linux-gnueabi_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armel_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.6.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.0-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-1 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-8_8.3.0-23 g++-9_9.2.1-8 g++-9-arm-linux-gnueabi_9.2.1-8cross1 g++-arm-linux-gnueabi_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-23 gcc-8-base_8.3.0-23 gcc-9_9.2.1-8 gcc-9-arm-linux-gnueabi_9.2.1-8cross1 gcc-9-arm-linux-gnueabi-base_9.2.1-8cross1 gcc-9-base_9.2.1-8 gcc-9-cross-base_9.2.1-8cross1 gcc-arm-linux-gnueabi_4:9.2.1-3.1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hostname_3.22+b1 ibverbs-providers_24.0-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.66-2 libasan5_9.2.1-8 libasan5-armel-cross_9.2.1-8cross1 libatomic1_9.2.1-8 libatomic1-armel-cross_9.2.1-8cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.32.51.20190909-1 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-2 libc-dev-bin_2.29-2 libc6_2.29-2 libc6-armel-cross_2.29-1cross7 libc6-dev_2.29-2 libc6-dev-armel-cross_2.29-1cross7 libcap-ng0_0.7.9-2+b1 libcc1-0_9.2.1-8 libcom-err2_1.45.4-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebhelper-perl_12.6.1 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libedit2_3.1-20190324-1 libelf1_0.176-1.1 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.0-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-23 libgcc-9-dev_9.2.1-8 libgcc-9-dev-armel-cross_9.2.1-8cross1 libgcc1_1:9.2.1-8 libgcc1-armel-cross_1:9.2.1-8cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-8 libglib2.0-0_2.62.1-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.9-5 libgomp1_9.2.1-8 libgomp1-armel-cross_9.2.1-8cross1 libgpg-error0_1.36-7 libgsl-dev_2.5+dfsg-6+b1 libgsl23_2.5+dfsg-6+b1 libgslcblas0_2.5+dfsg-6+b1 libgssapi-krb5-2_1.17-6 libhogweed4_3.5.1+really3.4.1-1 libhwloc-dev_1.11.13-1 libhwloc-plugins_1.11.13-1 libhwloc5_1.11.13-1 libibverbs-dev_24.0-2 libibverbs1_24.0-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl21_0.21-2 libitm1_9.2.1-8 libk5crypto3_1.17-6 libkeyutils1_1.6-6 libkrb5-3_1.17-6 libkrb5support0_1.17-6 liblocale-gettext-perl_1.07-3+b5 liblsan0_9.2.1-8 libltdl-dev_2.4.6-11 libltdl7_2.4.6-11 liblz4-1_1.9.1-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-5 libmagic1_1:5.37-5 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-23 libncurses6_6.1+20190803-1 libncursesw6_6.1+20190803-1 libnettle6_3.5.1+really3.4.1-1 libnl-3-200_3.4.0-1+b1 libnl-3-dev_3.4.0-1+b1 libnl-route-3-200_3.4.0-1+b1 libnl-route-3-dev_3.4.0-1+b1 libopenmpi-dev_3.1.3-11 libopenmpi3_3.1.3-11 libp11-kit0_0.23.17-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.14-1 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-5 libpipeline1_1.5.1-2 libpmix2_3.1.4-1 libquadmath0_9.2.1-8 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libssl1.1_1.1.1d-1 libstdc++-8-dev_8.3.0-23 libstdc++-9-dev_9.2.1-8 libstdc++-9-dev-armel-cross_9.2.1-8cross1 libstdc++6_9.2.1-8 libstdc++6-armel-cross_9.2.1-8cross1 libsub-override-perl_0.09-2 libsystemd0_242-7 libtasn1-6_4.14-3 libtinfo6_6.1+20190803-1 libtool_2.4.6-11 libtsan0_9.2.1-8 libubsan1_9.2.1-8 libubsan1-armel-cross_9.2.1-8cross1 libuchardet0_0.0.6-3 libudev1_242-7 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.4.3+dfsg-1 linux-libc-dev_5.2.17-1+b1 linux-libc-dev-armel-cross_5.2.9-2cross7 login_1:4.7-2 logsave_1.45.4-1 lsb-base_11.1.0 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.7-3 mawk_1.3.3-17+b3 mount_2.34-0.1 ncurses-base_6.1+20190803-1 ncurses-bin_6.1+20190803-1 ocl-icd-libopencl1_2.2.12-2 openmpi-bin_3.1.3-11 openmpi-common_3.1.3-11 openssh-client_1:8.0p1-7 passwd_1:4.7-2 patch_2.7.6-6 perl_5.30.0-5 perl-base_5.30.0-5 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-5 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.96~beta-3 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: ampliconnoise Binary: ampliconnoise Architecture: any Version: 1.29-8 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille Homepage: https://github.com/lanzen/ampliconnoise Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/ampliconnoise Vcs-Git: https://salsa.debian.org/med-team/ampliconnoise.git Build-Depends: debhelper (>= 11~), libgsl-dev, libopenmpi-dev Package-List: ampliconnoise deb science optional arch=any Checksums-Sha1: 743cbd53fa3410dea902f3dc82864041defc3c4b 1403119 ampliconnoise_1.29.orig.tar.gz 8eb6cf9bd6c28ed7ce85ade83aec34cc8680be4c 8796 ampliconnoise_1.29-8.debian.tar.xz Checksums-Sha256: 0bf946806d77ecaf0994ad8ebf9a5e98ad33c809f6def5c9340a16c367918167 1403119 ampliconnoise_1.29.orig.tar.gz 7ff546ef97ddd48b84896672d8635d7e663ae488635de55b5ba5788e575bfdee 8796 ampliconnoise_1.29-8.debian.tar.xz Files: d6723e6f9cc71d7eb6f1a65ba4643aac 1403119 ampliconnoise_1.29.orig.tar.gz 643517e05d1dab4524803071edad6bff 8796 ampliconnoise_1.29-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlvJ0xsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHzjA/9FgbX3aJl1zMunV9vZ1d4LiBVHd3XW4lB 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signature: No public key dpkg-source: warning: failed to verify signature on ./ampliconnoise_1.29-8.dsc dpkg-source: info: extracting ampliconnoise in /<> dpkg-source: info: unpacking ampliconnoise_1.29.orig.tar.gz dpkg-source: info: unpacking ampliconnoise_1.29-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-path-for-data.patch dpkg-source: info: applying fix-segfault-on-non-fasta-input.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying clang-ftbfs.patch dpkg-source: info: applying mayhem.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-c3db6b96-5e5b-4d5c-a795-9fb98f52550b SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package ampliconnoise dpkg-buildpackage: info: source version 1.29-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' (cd FCluster && make clean) make[2]: Entering directory '/<>/FCluster' rm -rf *o FCluster make[2]: Leaving directory '/<>/FCluster' (cd FastaUnique && make clean) make[2]: Entering directory '/<>/FastaUnique' rm -rf *.o FastaUnique make[2]: Leaving directory '/<>/FastaUnique' (cd NDist && make clean) make[2]: Entering directory '/<>/NDist' rm -rf *.o NDist make[2]: Leaving directory '/<>/NDist' (cd PyroDist && make clean) make[2]: Entering directory '/<>/PyroDist' rm -rf *.o PyroDist make[2]: Leaving directory '/<>/PyroDist' (cd PyroNoise && make clean) make[2]: Entering directory '/<>/PyroNoise' rm -rf *.o PyroNoise make[2]: Leaving directory '/<>/PyroNoise' (cd PyroNoiseM && make clean) make[2]: Entering directory '/<>/PyroNoiseM' rm -rf *.o PyroNoiseM make[2]: Leaving directory '/<>/PyroNoiseM' (cd PyroNoiseA && make clean) make[2]: Entering directory '/<>/PyroNoiseA' rm -rf *.o PyroNoiseA make[2]: Leaving directory '/<>/PyroNoiseA' (cd SeqDist && make clean) make[2]: Entering directory '/<>/SeqDist' rm -rf *.o SeqDist make[2]: Leaving directory '/<>/SeqDist' (cd SeqNoise && make clean) make[2]: Entering directory '/<>/SeqNoise' rm -rf *.o SeqNoise make[2]: Leaving directory '/<>/SeqNoise' (cd SplitClusterEven && make clean) make[2]: Entering directory '/<>/SplitClusterEven' rm -rf *.o SplitClusterEven make[2]: Leaving directory '/<>/SplitClusterEven' (cd SplitClusterClust && make clean) make[2]: Entering directory '/<>/SplitClusterClust' rm -rf *.o SplitClusterClust make[2]: Leaving directory '/<>/SplitClusterClust' (cd Perseus && make clean) make[2]: Entering directory '/<>/Perseus' rm -rf *.o Perseus make[2]: Leaving directory '/<>/Perseus' (cd PerseusD && make clean) make[2]: Entering directory '/<>/PerseusD' rm -rf *.o PerseusD make[2]: Leaving directory '/<>/PerseusD' (cd bin && rm -rf *) make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f *.o rm -f *.1 make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc make[1]: Entering directory '/<>' (cd FCluster && CFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make) make[2]: Entering directory '/<>/FCluster' arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FCluster.c FCluster.c:223:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 223 | UpdateMinCacheForMarkedRows(struct t_Min* asMin,float** aafDistMatrix,int nN) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ FCluster.c: In function ‘UpdateMinCacheForMarkedRows’: FCluster.c:230:13: warning: implicit declaration of function ‘UpdateMinCacheForRow’; did you mean ‘UpdateMinCacheForMarkedRows’? [-Wimplicit-function-declaration] 230 | UpdateMinCacheForRow(asMin,i,aafDistMatrix); | ^~~~~~~~~~~~~~~~~~~~ | UpdateMinCacheForMarkedRows FCluster.c: At top level: FCluster.c:237:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 237 | UpdateMinCacheForRow(struct t_Min* asMin,int i,float** aafDistMatrix) | ^~~~~~~~~~~~~~~~~~~~ linking... arm-linux-gnueabi-gcc -Wl,-z,relro -Wl,-z,now -o FCluster FCluster.o -lm make[2]: Leaving directory '/<>/FCluster' (cd FastaUnique && CFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make) make[2]: Entering directory '/<>/FastaUnique' arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c FastaUnique.c linking... arm-linux-gnueabi-gcc -Wl,-z,relro -Wl,-z,now -o FastaUnique FastaUnique.o -lm make[2]: Leaving directory '/<>/FastaUnique' (cd NDist && CFLAGS="-g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make) make[2]: Entering directory '/<>/NDist' arm-linux-gnueabi-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c NDist.c NDist.c:14:10: fatal error: mpi.h: No such file or directory 14 | #include | ^~~~~~~ compilation terminated. make[2]: *** [makefile:13: NDist.o] Error 1 make[2]: Leaving directory '/<>/NDist' make[1]: *** [makefile:4: all] Error 2 make[1]: Leaving directory '/<>' dh_auto_build: make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc returned exit code 2 make: *** [debian/rules:14: build-arch] Error 255 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2019-10-08T02:13:53Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 6224 Build-Time: 3 Distribution: unstable Fail-Stage: build Foreign Architectures: armel Host Architecture: armel Install-Time: 22 Job: ampliconnoise_1.29-8 Machine Architecture: amd64 Package: ampliconnoise Package-Time: 38 Source-Version: 1.29-8 Space: 6224 Status: attempted Version: 1.29-8 -------------------------------------------------------------------------------- Finished at 2019-10-08T02:13:53Z Build needed 00:00:38, 6224k disk space