sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | anfo 0.98-9 (mipsel) Sun, 26 Mar 2023 13:38:31 +0000 | +==============================================================================+ Package: anfo Version: 0.98-9 Source Version: 0.98-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-622515fb-455f-4858-bbbb-679ad6bf62ff' with '<>' I: NOTICE: Log filtering will replace 'build/anfo-tSKFCI/resolver-1pb8dn' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [180 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-03-26-0803.58-F-2023-03-26-0207.24.pdiff [2348 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-03-26-0207.24-F-2023-03-26-0207.24.pdiff [2559 B] Get:4 http://localhost:3142/debian sid/main Sources T-2023-03-26-0803.58-F-2023-03-26-0207.24.pdiff [2348 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-03-26-0207.24-F-2023-03-26-0207.24.pdiff [2559 B] Get:6 http://localhost:3142/debian sid/main mipsel Packages [9024 kB] Fetched 9336 kB in 2s (4594 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'anfo' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/anfo.git Please use: git clone https://salsa.debian.org/med-team/anfo.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 472 kB of source archives. Get:1 http://localhost:3142/debian sid/main anfo 0.98-9 (dsc) [2105 B] Get:2 http://localhost:3142/debian sid/main anfo 0.98-9 (tar) [462 kB] Get:3 http://localhost:3142/debian sid/main anfo 0.98-9 (diff) [7952 B] Fetched 472 kB in 0s (8590 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/anfo-tSKFCI/anfo-0.98' with '<>' I: NOTICE: Log filtering will replace 'build/anfo-tSKFCI' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libpopt-dev, libprotobuf-dev, libelk0-dev, libelk0, zlib1g-dev, libbz2-dev, pkg-config, protobuf-compiler, d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 13), libpopt-dev, libprotobuf-dev, libelk0-dev, libelk0, zlib1g-dev, libbz2-dev, pkg-config, protobuf-compiler, d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [456 B] Get:5 copy:/<>/apt_archive ./ Packages [547 B] Fetched 1960 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbsd0 libbsd0:mipsel libbz2-1.0:mipsel libbz2-dev:mipsel libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf-dev:mipsel libelf1 libelf1:mipsel libelk0:mipsel libelk0-dev:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libice-dev:mipsel libice6:mipsel libicu72 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libmd0:mipsel libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libpkgconf3 libpopt-dev:mipsel libpopt0:mipsel libprotobuf-dev:mipsel libprotobuf-lite32:mipsel libprotobuf32 libprotobuf32:mipsel libprotoc32 libpthread-stubs0-dev libpthread-stubs0-dev:mipsel libsm-dev:mipsel libsm6:mipsel libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libuuid1:mipsel libx11-6 libx11-6:mipsel libx11-data libx11-dev libx11-dev:mipsel libxau-dev libxau-dev:mipsel libxau6 libxau6:mipsel libxcb1 libxcb1:mipsel libxcb1-dev libxcb1-dev:mipsel libxdmcp-dev libxdmcp-dev:mipsel libxdmcp6 libxdmcp6:mipsel libxext-dev:mipsel libxext6:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu-dev:mipsel libxmu-headers libxmu6:mipsel libxt-dev:mipsel libxt6:mipsel libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db pkg-config:mipsel pkgconf:mipsel pkgconf-bin po-debconf protobuf-compiler sensible-utils ucf x11-common x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-mipsel-linux-gnu gcc-12-doc gcc-12-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel libnss-nis:mipsel libnss-nisplus:mipsel manpages-dev:mipsel krb5-doc:mipsel krb5-user:mipsel libice-doc:mipsel libsm-doc:mipsel libstdc++-11-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc libx11-doc:mipsel libxcb-doc libxcb-doc:mipsel libxext-doc:mipsel libxt-doc:mipsel libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl protobuf-mode-el Recommended packages: curl | wget | lynx bzip2-doc:mipsel libidn2-0:mipsel libarchive-cpio-perl krb5-locales:mipsel libltdl-dev uuid-runtime:mipsel libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl libprotobuf-dev The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbsd0 libbsd0:mipsel libbz2-1.0:mipsel libbz2-dev:mipsel libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf-dev:mipsel libelf1 libelf1:mipsel libelk0:mipsel libelk0-dev:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libice-dev:mipsel libice6:mipsel libicu72 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libmd0:mipsel libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libpkgconf3 libpopt-dev:mipsel libpopt0:mipsel libprotobuf-dev:mipsel libprotobuf-lite32:mipsel libprotobuf32 libprotobuf32:mipsel libprotoc32 libpthread-stubs0-dev libpthread-stubs0-dev:mipsel libsm-dev:mipsel libsm6:mipsel libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libuuid1:mipsel libx11-6 libx11-6:mipsel libx11-data libx11-dev libx11-dev:mipsel libxau-dev libxau-dev:mipsel libxau6 libxau6:mipsel libxcb1 libxcb1:mipsel libxcb1-dev libxcb1-dev:mipsel libxdmcp-dev libxdmcp-dev:mipsel libxdmcp6 libxdmcp6:mipsel libxext-dev:mipsel libxext6:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu-dev:mipsel libxmu-headers libxmu6:mipsel libxt-dev:mipsel libxt6:mipsel libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db pkg-config:mipsel pkgconf:mipsel pkgconf-bin po-debconf protobuf-compiler sbuild-build-depends-main-dummy:mipsel sensible-utils ucf x11-common x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 149 newly installed, 0 to remove and 0 not upgraded. Need to get 86.6 MB of archives. After this operation, 347 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-12 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-12 [495 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-mipsel-linux-gnu amd64 2.40-2cross2 [2795 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu-base amd64 12.2.0-14cross5 [37.7 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [8083 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-mipsel-linux-gnu amd64 4:12.2.0-4 [3284 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base-mipsen all 12.2.0-14cross5 [33.3 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-mipsel-cross all 2.36-8cross2 [950 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-mipsel-cross all 12.2.0-14cross5 [46.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-mipsel-cross all 12.2.0-14cross5 [105 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-mipsel-cross all 12.2.0-14cross5 [6476 B] Get:29 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-mipsel-cross all 12.2.0-14cross5 [267 kB] Get:30 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [15.9 MB] Get:31 http://localhost:3142/debian sid/main amd64 gcc-mipsel-linux-gnu amd64 4:12.2.0-4 [1452 B] Get:32 http://localhost:3142/debian sid/main amd64 libstdc++6-mipsel-cross all 12.2.0-14cross5 [498 kB] Get:33 http://localhost:3142/debian sid/main amd64 linux-libc-dev-mipsel-cross all 6.1.8-1cross2 [1837 kB] Get:34 http://localhost:3142/debian sid/main amd64 libc6-dev-mipsel-cross all 2.36-8cross2 [1417 kB] Get:35 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-mipsel-cross all 12.2.0-14cross5 [2033 kB] Get:36 http://localhost:3142/debian sid/main amd64 g++-12-mipsel-linux-gnu amd64 12.2.0-14cross5 [9009 kB] Get:37 http://localhost:3142/debian sid/main amd64 g++-mipsel-linux-gnu amd64 4:12.2.0-4 [1176 B] Get:38 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:39 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:40 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:41 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB] Get:42 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:47 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:48 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:52 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 crossbuild-essential-mipsel all 12.9 [6728 B] Get:54 http://localhost:3142/debian sid/main amd64 d-shlibs all 0.104 [18.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:57 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:58 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:59 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:60 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:61 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:62 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:63 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:64 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-12 [1300 kB] Get:65 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:66 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:67 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.4 [942 kB] Get:68 http://localhost:3142/debian sid/main mipsel gcc-11-base mipsel 11.3.0-12 [38.4 kB] Get:69 http://localhost:3142/debian sid/main mipsel gcc-12-base mipsel 12.2.0-14 [37.5 kB] Get:70 http://localhost:3142/debian sid/main mipsel libgcc-s1 mipsel 12.2.0-14 [45.7 kB] Get:71 http://localhost:3142/debian sid/main mipsel libc6 mipsel 2.36-8 [2264 kB] Get:72 http://localhost:3142/debian sid/main mipsel libatomic1 mipsel 12.2.0-14 [6700 B] Get:73 http://localhost:3142/debian sid/main mipsel libmd0 mipsel 1.0.4-2 [29.9 kB] Get:74 http://localhost:3142/debian sid/main mipsel libbsd0 mipsel 0.11.7-4 [115 kB] Get:75 http://localhost:3142/debian sid/main amd64 libbsd0 amd64 0.11.7-4 [115 kB] Get:76 http://localhost:3142/debian sid/main mipsel libbz2-1.0 mipsel 1.0.8-5+b1 [47.2 kB] Get:77 http://localhost:3142/debian sid/main mipsel linux-libc-dev mipsel 6.1.20-1 [1744 kB] Get:78 http://localhost:3142/debian sid/main mipsel libcrypt1 mipsel 1:4.4.33-2 [113 kB] Get:79 http://localhost:3142/debian sid/main mipsel libcrypt-dev mipsel 1:4.4.33-2 [144 kB] Get:80 http://localhost:3142/debian sid/main mipsel libcom-err2 mipsel 1.47.0-2 [19.4 kB] Get:81 http://localhost:3142/debian sid/main mipsel libkrb5support0 mipsel 1.20.1-1+b1 [31.6 kB] Get:82 http://localhost:3142/debian sid/main mipsel libk5crypto3 mipsel 1.20.1-1+b1 [84.3 kB] Get:83 http://localhost:3142/debian sid/main mipsel libkeyutils1 mipsel 1.6.3-2 [8288 B] Get:84 http://localhost:3142/debian sid/main mipsel libssl3 mipsel 3.0.8-1 [1523 kB] Get:85 http://localhost:3142/debian sid/main mipsel libkrb5-3 mipsel 1.20.1-1+b1 [303 kB] Get:86 http://localhost:3142/debian sid/main mipsel libgssapi-krb5-2 mipsel 1.20.1-1+b1 [117 kB] Get:87 http://localhost:3142/debian sid/main mipsel libtirpc3 mipsel 1.3.3+ds-1 [74.3 kB] Get:88 http://localhost:3142/debian sid/main mipsel libnsl2 mipsel 1.3.0-2 [35.2 kB] Get:89 http://localhost:3142/debian sid/main mipsel libtirpc-dev mipsel 1.3.3+ds-1 [197 kB] Get:90 http://localhost:3142/debian sid/main mipsel libnsl-dev mipsel 1.3.0-2 [69.1 kB] Get:91 http://localhost:3142/debian sid/main mipsel libc6-dev mipsel 2.36-8 [1421 kB] Get:92 http://localhost:3142/debian sid/main mipsel libbz2-dev mipsel 1.0.8-5+b1 [32.6 kB] Get:93 http://localhost:3142/debian sid/main mipsel zlib1g mipsel 1:1.2.13.dfsg-1 [77.8 kB] Get:94 http://localhost:3142/debian sid/main mipsel libelf1 mipsel 0.188-2.1 [176 kB] Get:95 http://localhost:3142/debian sid/main mipsel zlib1g-dev mipsel 1:1.2.13.dfsg-1 [909 kB] Get:96 http://localhost:3142/debian sid/main mipsel libelf-dev mipsel 0.188-2.1 [79.9 kB] Get:97 http://localhost:3142/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:98 http://localhost:3142/debian sid/main mipsel libice6 mipsel 2:1.0.10-1 [52.9 kB] Get:99 http://localhost:3142/debian sid/main mipsel libuuid1 mipsel 2.38.1-5+b1 [29.2 kB] Get:100 http://localhost:3142/debian sid/main mipsel libsm6 mipsel 2:1.2.3-1 [33.2 kB] Get:101 http://localhost:3142/debian sid/main mipsel libxau6 mipsel 1:1.0.9-1 [19.4 kB] Get:102 http://localhost:3142/debian sid/main mipsel libxdmcp6 mipsel 1:1.1.2-3 [25.7 kB] Get:103 http://localhost:3142/debian sid/main mipsel libxcb1 mipsel 1.15-1 [138 kB] Get:104 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.4-2 [292 kB] Get:105 http://localhost:3142/debian sid/main mipsel libx11-6 mipsel 2:1.8.4-2 [708 kB] Get:106 http://localhost:3142/debian sid/main mipsel libxext6 mipsel 2:1.3.4-1+b1 [49.1 kB] Get:107 http://localhost:3142/debian sid/main mipsel libxt6 mipsel 1:1.2.1-1 [164 kB] Get:108 http://localhost:3142/debian sid/main mipsel libxmu6 mipsel 2:1.1.3-3 [54.9 kB] Get:109 http://localhost:3142/debian sid/main mipsel libelk0 mipsel 3.99.8-4.2+b1 [168 kB] Get:110 http://localhost:3142/debian sid/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:111 http://localhost:3142/debian sid/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get:112 http://localhost:3142/debian sid/main mipsel libxau-dev mipsel 1:1.0.9-1 [23.3 kB] Get:113 http://localhost:3142/debian sid/main mipsel libxdmcp-dev mipsel 1:1.1.2-3 [42.4 kB] Get:114 http://localhost:3142/debian sid/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:115 http://localhost:3142/debian sid/main mipsel libpthread-stubs0-dev mipsel 0.4-1 [5340 B] Get:116 http://localhost:3142/debian sid/main mipsel libxcb1-dev mipsel 1.15-1 [184 kB] Get:117 http://localhost:3142/debian sid/main mipsel libx11-dev mipsel 2:1.8.4-2 [830 kB] Get:118 http://localhost:3142/debian sid/main mipsel libxext-dev mipsel 2:1.3.4-1+b1 [109 kB] Get:119 http://localhost:3142/debian sid/main mipsel libice-dev mipsel 2:1.0.10-1 [68.7 kB] Get:120 http://localhost:3142/debian sid/main mipsel libsm-dev mipsel 2:1.2.3-1 [37.9 kB] Get:121 http://localhost:3142/debian sid/main mipsel libxt-dev mipsel 1:1.2.1-1 [411 kB] Get:122 http://localhost:3142/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:123 http://localhost:3142/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:124 http://localhost:3142/debian sid/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:125 http://localhost:3142/debian sid/main amd64 libx11-6 amd64 2:1.8.4-2 [759 kB] Get:126 http://localhost:3142/debian sid/main amd64 libxau-dev amd64 1:1.0.9-1 [22.9 kB] Get:127 http://localhost:3142/debian sid/main amd64 libxdmcp-dev amd64 1:1.1.2-3 [42.2 kB] Get:128 http://localhost:3142/debian sid/main amd64 libpthread-stubs0-dev amd64 0.4-1 [5344 B] Get:129 http://localhost:3142/debian sid/main amd64 libxcb1-dev amd64 1.15-1 [181 kB] Get:130 http://localhost:3142/debian sid/main amd64 libx11-dev amd64 2:1.8.4-2 [836 kB] Get:131 http://localhost:3142/debian sid/main amd64 libxmu-headers all 2:1.1.3-3 [68.5 kB] Get:132 http://localhost:3142/debian sid/main mipsel libxmu-dev mipsel 2:1.1.3-3 [67.6 kB] Get:133 http://localhost:3142/debian sid/main mipsel libelk0-dev mipsel 3.99.8-4.2+b1 [228 kB] Get:134 http://localhost:3142/debian sid/main mipsel libgomp1 mipsel 12.2.0-14 [107 kB] Get:135 http://localhost:3142/debian sid/main mipsel libgcc-11-dev mipsel 11.3.0-12 [254 kB] Get:136 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get:137 http://localhost:3142/debian sid/main mipsel libpopt0 mipsel 1.19+dfsg-1 [42.1 kB] Get:138 http://localhost:3142/debian sid/main mipsel libpopt-dev mipsel 1.19+dfsg-1 [47.7 kB] Get:139 http://localhost:3142/debian sid/main mipsel libstdc++6 mipsel 12.2.0-14 [541 kB] Get:140 http://localhost:3142/debian sid/main mipsel libprotobuf32 mipsel 3.21.12-1+b2 [798 kB] Get:141 http://localhost:3142/debian sid/main mipsel libprotobuf-lite32 mipsel 3.21.12-1+b2 [240 kB] Get:142 http://localhost:3142/debian sid/main mipsel libprotobuf-dev mipsel 3.21.12-1+b2 [1384 kB] Get:143 http://localhost:3142/debian sid/main amd64 libprotobuf32 amd64 3.21.12-1+b2 [932 kB] Get:144 http://localhost:3142/debian sid/main amd64 libprotoc32 amd64 3.21.12-1+b2 [830 kB] Get:145 http://localhost:3142/debian sid/main mipsel libstdc++-11-dev mipsel 11.3.0-12 [1970 kB] Get:146 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get:147 http://localhost:3142/debian sid/main mipsel pkgconf mipsel 1.8.1-1 [25.9 kB] Get:148 http://localhost:3142/debian sid/main mipsel pkg-config mipsel 1.8.1-1 [13.7 kB] Get:149 http://localhost:3142/debian sid/main amd64 protobuf-compiler amd64 3.21.12-1+b2 [84.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 86.6 MB in 1s (69.8 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15279 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... 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Unpacking sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up gcc-11-base:mipsel (11.3.0-12) ... Setting up libfile-which-perl (1.27-2) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up libmagic1:amd64 (1:5.44-3) ... Setting up gcc-12-cross-base-mipsen (12.2.0-14cross5) ... Setting up linux-libc-dev:mipsel (6.1.20-1) ... Setting up libc6-mipsel-cross (2.36-8cross2) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up libatomic1-mipsel-cross (12.2.0-14cross5) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up libpthread-stubs0-dev:amd64 (0.4-1) ... Setting up libpthread-stubs0-dev:mipsel (0.4-1) ... Setting up gcc-12-mipsel-linux-gnu-base:amd64 (12.2.0-14cross5) ... Setting up gcc-12-base:mipsel (12.2.0-14) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libpkgconf3:amd64 (1.8.1-1) ... Setting up libx11-data (2:1.8.4-2) ... Setting up binutils-mipsel-linux-gnu (2.40-2cross2) ... Setting up libgomp1-mipsel-cross (12.2.0-14cross5) ... Setting up autopoint (0.21-12) ... Setting up d-shlibs (0.104) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up autoconf (2.71-3) ... Setting up libprotobuf32:amd64 (3.21.12-1+b2) ... Setting up linux-libc-dev-mipsel-cross (6.1.8-1cross2) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up cpp-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libbsd0:amd64 (0.11.7-4) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up libprotoc32:amd64 (3.21.12-1+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2022.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-12) ... Setting up libxau-dev:amd64 (1:1.0.9-1) ... Setting up libc6-dev-mipsel-cross (2.36-8cross2) ... Setting up protobuf-compiler (3.21.12-1+b2) ... Setting up libtool (2.4.7-5) ... Setting up libgcc-s1-mipsel-cross (12.2.0-14cross5) ... Setting up libgcc-12-dev-mipsel-cross (12.2.0-14cross5) ... Setting up pkgconf:mipsel (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ... Setting up cpp-mipsel-linux-gnu (4:12.2.0-4) ... Setting up pkg-config:mipsel (1.8.1-1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libx11-6:amd64 (2:1.8.4-2) ... Setting up gcc-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up libxcb1-dev:amd64 (1.15-1) ... Setting up libstdc++6-mipsel-cross (12.2.0-14cross5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libx11-dev:amd64 (2:1.8.4-2) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libstdc++-12-dev-mipsel-cross (12.2.0-14cross5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxmu-headers (2:1.1.3-3) ... Setting up debhelper (13.11.4) ... Setting up g++-12-mipsel-linux-gnu (12.2.0-14cross5) ... Setting up g++-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-mipsel (12.9) ... Setting up libgcc-s1:mipsel (12.2.0-14) ... Setting up libc6:mipsel (2.36-8) ... Setting up libmd0:mipsel (1.0.4-2) ... Setting up libbz2-1.0:mipsel (1.0.8-5+b1) ... Setting up libbsd0:mipsel (0.11.7-4) ... Setting up libstdc++6:mipsel (12.2.0-14) ... Setting up libpopt0:mipsel (1.19+dfsg-1) ... Setting up libice6:mipsel (2:1.0.10-1) ... Setting up libxau6:mipsel (1:1.0.9-1) ... Setting up libxdmcp6:mipsel (1:1.1.2-3) ... Setting up libkeyutils1:mipsel (1.6.3-2) ... Setting up libxcb1:mipsel (1.15-1) ... Setting up libxau-dev:mipsel (1:1.0.9-1) ... Setting up libice-dev:mipsel (2:1.0.10-1) ... Setting up zlib1g:mipsel (1:1.2.13.dfsg-1) ... Setting up libcrypt1:mipsel (1:4.4.33-2) ... Setting up libcom-err2:mipsel (1.47.0-2) ... Setting up libgomp1:mipsel (12.2.0-14) ... Setting up libkrb5support0:mipsel (1.20.1-1+b1) ... Setting up libxdmcp-dev:mipsel (1:1.1.2-3) ... Setting up libatomic1:mipsel (12.2.0-14) ... Setting up libuuid1:mipsel (2.38.1-5+b1) ... Setting up libk5crypto3:mipsel (1.20.1-1+b1) ... Setting up libgcc-11-dev:mipsel (11.3.0-12) ... Setting up libprotobuf32:mipsel (3.21.12-1+b2) ... Setting up libcrypt-dev:mipsel (1:4.4.33-2) ... Setting up libprotobuf-lite32:mipsel (3.21.12-1+b2) ... Setting up libx11-6:mipsel (2:1.8.4-2) ... Setting up libelf1:mipsel (0.188-2.1) ... Setting up libsm6:mipsel (2:1.2.3-1) ... Setting up libxcb1-dev:mipsel (1.15-1) ... Setting up libsm-dev:mipsel (2:1.2.3-1) ... Setting up libssl3:mipsel (3.0.8-1) ... Setting up libx11-dev:mipsel (2:1.8.4-2) ... Setting up libxext6:mipsel (2:1.3.4-1+b1) ... Setting up libxt6:mipsel (1:1.2.1-1) ... Setting up libxext-dev:mipsel (2:1.3.4-1+b1) ... Setting up libkrb5-3:mipsel (1.20.1-1+b1) ... Setting up libxmu6:mipsel (2:1.1.3-3) ... Setting up libxt-dev:mipsel (1:1.2.1-1) ... Setting up libgssapi-krb5-2:mipsel (1.20.1-1+b1) ... Setting up libelk0:mipsel (3.99.8-4.2+b1) ... Setting up libtirpc3:mipsel (1.3.3+ds-1) ... Setting up libxmu-dev:mipsel (2:1.1.3-3) ... Setting up libtirpc-dev:mipsel (1.3.3+ds-1) ... Setting up libnsl2:mipsel (1.3.0-2) ... Setting up libnsl-dev:mipsel (1.3.0-2) ... Setting up libc6-dev:mipsel (2.36-8) ... Setting up libbz2-dev:mipsel (1.0.8-5+b1) ... Setting up libpopt-dev:mipsel (1.19+dfsg-1) ... Setting up libstdc++-11-dev:mipsel (11.3.0-12) ... Setting up zlib1g-dev:mipsel (1:1.2.13.dfsg-1) ... Setting up libprotobuf-dev:mipsel (3.21.12-1+b2) ... Setting up libelf-dev:mipsel (0.188-2.1) ... Setting up libelk0-dev:mipsel (3.99.8-4.2+b1) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.36-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) amd64 (x86_64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.21 g++-11_11.3.0-12 g++-12_12.2.0-14 gcc-11_11.3.0-12 gcc-12_12.2.0-14 libc6-dev_2.36-8 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mipsel-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mipsel-cross_12.2.0-14cross5 linux-libc-dev_6.1.20-1 Package versions: adduser_3.132 apt_2.6.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_12.4 base-passwd_3.6.1 bash_5.2.15-2+b1 binutils_2.40-2 binutils-common_2.40-2 binutils-mipsel-linux-gnu_2.40-2cross2 binutils-x86-64-linux-gnu_2.40-2 bsdextrautils_2.38.1-5+b1 bsdutils_1:2.38.1-5+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-11_11.3.0-12 cpp-12_12.2.0-14 cpp-12-mipsel-linux-gnu_12.2.0-14cross5 cpp-mipsel-linux-gnu_4:12.2.0-4 cross-config_2.6.20 crossbuild-essential-mipsel_12.9 d-shlibs_0.104 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2023.2 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.21 dpkg-cross_2.6.20 dpkg-dev_1.21.21 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3 g++-11_11.3.0-12 g++-12_12.2.0-14 g++-12-mipsel-linux-gnu_12.2.0-14cross5 g++-mipsel-linux-gnu_4:12.2.0-4 gcc_4:12.2.0-3 gcc-11_11.3.0-12 gcc-11-base_11.3.0-12 gcc-12_12.2.0-14 gcc-12-base_12.2.0-14 gcc-12-cross-base-mipsen_12.2.0-14cross5 gcc-12-mipsel-linux-gnu_12.2.0-14cross5 gcc-12-mipsel-linux-gnu-base_12.2.0-14cross5 gcc-9-base_9.5.0-3 gcc-mipsel-linux-gnu_4:12.2.0-4 gettext_0.21-12 gettext-base_0.21-12 gpgv_2.2.40-1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.6.0 libarchive-zip-perl_1.68-1 libasan6_11.3.0-12 libasan8_12.2.0-14 libatomic1_12.2.0-14 libatomic1-mipsel-cross_12.2.0-14cross5 libattr1_1:2.5.1-4 libaudit-common_1:3.0.9-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2 libblkid1_2.38.1-5+b1 libbsd0_0.11.7-4 libbz2-1.0_1.0.8-5+b1 libbz2-dev_1.0.8-5+b1 libc-bin_2.36-8 libc-dev-bin_2.36-8 libc6_2.36-8 libc6-dev_2.36-8 libc6-dev-mipsel-cross_2.36-8cross2 libc6-mipsel-cross_2.36-8cross2 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-3 libcc1-0_12.2.0-14 libcom-err2_1.47.0-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2 libctf0_2.40-2 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.267 libdebhelper-perl_13.11.4 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.21.21 libelf-dev_0.188-2.1 libelf1_0.188-2.1 libelk0_3.99.8-4.2+b1 libelk0-dev_3.99.8-4.2+b1 libext2fs2_1.47.0-2 libfakeroot_1.31-1.2 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-12 libgcc-12-dev_12.2.0-14 libgcc-12-dev-mipsel-cross_12.2.0-14cross5 libgcc-s1_12.2.0-14 libgcc-s1-mipsel-cross_12.2.0-14cross5 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.9-1 libgomp1_12.2.0-14 libgomp1-mipsel-cross_12.2.0-14cross5 libgpg-error0_1.46-1 libgprofng0_2.40-2 libgssapi-krb5-2_1.20.1-1+b1 libhogweed6_3.8.1-2 libice-dev_2:1.0.10-1 libice6_2:1.0.10-1 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-4 libisl23_0.25-1 libitm1_12.2.0-14 libjansson4_2.14-2 libk5crypto3_1.20.1-1+b1 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-1+b1 libkrb5support0_1.20.1-1+b1 liblocale-gettext-perl_1.07-5 liblsan0_12.2.0-14 liblz4-1_1.9.4-1 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-5+b1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-6 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libpkgconf3_1.8.1-1 libpopt-dev_1.19+dfsg-1 libpopt0_1.19+dfsg-1 libprotobuf-dev_3.21.12-1+b2 libprotobuf-lite32_3.21.12-1+b2 libprotobuf32_3.21.12-1+b2 libprotoc32_3.21.12-1+b2 libpthread-stubs0-dev_0.4-1 libquadmath0_12.2.0-14 libseccomp2_2.5.4-1+b3 libselinux1_3.4-1+b5 libsemanage-common_3.4-1 libsemanage2_3.4-1+b5 libsepol2_3.4-2 libsm-dev_2:1.2.3-1 libsm6_2:1.2.3-1 libsmartcols1_2.38.1-5+b1 libss2_1.47.0-2 libssl3_3.0.8-1 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mipsel-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mipsel-cross_12.2.0-14cross5 libsub-override-perl_0.09-4 libsystemd0_252.6-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-12 libtsan2_12.2.0-14 libubsan1_12.2.0-14 libuchardet0_0.0.7-1 libudev1_252.6-1 libunistring2_1.0-2 libuuid1_2.38.1-5+b1 libx11-6_2:1.8.4-2 libx11-data_2:1.8.4-2 libx11-dev_2:1.8.4-2 libxau-dev_1:1.0.9-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxcb1-dev_1.15-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.4-1+b1 libxext6_2:1.3.4-1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.1+b3 libxmu-dev_2:1.1.3-3 libxmu-headers_2:1.1.3-3 libxmu6_2:1.1.3-3 libxt-dev_1:1.2.1-1 libxt6_1:1.2.1-1 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.20-1 linux-libc-dev-mipsel-cross_6.1.8-1cross2 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-2 mawk_1.3.4.20200120-3.1 mount_2.38.1-5+b1 ncurses-base_6.4-2 ncurses-bin_6.4-2 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-7 pkg-config_1.8.1-1 pkgconf_1.8.1-1 pkgconf-bin_1.8.1-1 po-debconf_1.0.21+nmu1 protobuf-compiler_3.21.12-1+b2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.17+nmu1 sysvinit-utils_3.06-2 tar_1.34+dfsg-1.1 tzdata_2023b-1 ucf_3.0043+nmu1 usrmerge_35 util-linux_2.38.1-5+b1 util-linux-extra_2.38.1-5+b1 x11-common_1:7.7+23 x11proto-dev_2022.1-1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: anfo Binary: anfo, libanfo0, libanfo0-dev Architecture: any Version: 0.98-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://bioinf.eva.mpg.de/anfo/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/anfo Vcs-Git: https://salsa.debian.org/med-team/anfo.git Build-Depends: debhelper-compat (= 13), libpopt-dev, libprotobuf-dev, libelk0-dev, libelk0, zlib1g-dev, libbz2-dev, pkg-config, protobuf-compiler, d-shlibs Package-List: anfo deb science optional arch=any libanfo0 deb libs optional arch=any libanfo0-dev deb libdevel optional arch=any Checksums-Sha1: df0dc3bd6ac455e86cf66628434ac1587336c14c 462359 anfo_0.98.orig.tar.gz 9d0537956bf5b0c505db90957dca4fc911d418fb 7952 anfo_0.98-9.debian.tar.xz Checksums-Sha256: fdd7bfb6467872f4b9f3a3a19310f73154345689751fd965b1f4418ee0f740e7 462359 anfo_0.98.orig.tar.gz 130cf68fc7d9deeef66cdf7655eddf148a321c9bea2d24ca6dc5fcec23833b67 7952 anfo_0.98-9.debian.tar.xz Files: 17398d931375f0be94cf5543739733b8 462359 anfo_0.98.orig.tar.gz b71e9cbaca6ab43a567ee6bf3d6795ba 7952 anfo_0.98-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmFdlk4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEt8A/9EB/mQ7qeZvwrkMg0+k1aPspbbzfVfxJs 8XbDmS78oOZ9Zr0CemhcEDSwUJFtXkZCIl+rSq3j+yPoqgfQTu8oTbAIX2IinCno aSfEpueQqUa7whWqlZMJHZfB52pGik03vkQp3PaA026tqewVWJs5oMoz8XkZRYbB BqcX20nT8GXuNZFNqtNXGNEpOWXLKaHvDgE9DsUQ8GoMzDKtmVS9i2FR9Ktx0c1T 72F4kUVRenlIISkCeFOBGNCiIk+bb90JXthEfPRtICTDRLnYyrV8Zo2JQCpLzW7Z CKFqPwD4XNEKQcTNRb9a/arKnEKde9AINhyzu87zUCWodPG+Hj4gjwxhhOugMzSl QYqGEd95d56BectHUYoIa2sZKhvI4BSWSQK899C+9bEjpKF6peDVXdmWGN/4EGdw gfpQhVqV55J2AcmkO0hQC3PhiWAcYzXslcodZA+yaSMT/A6cy84KW3iAabg5CsiK 96zYhxjo7TRpJVltAYY4KY1s9Ca37RZ8Jb8wI0yiUqM6fixmWY9EC1Fq0kNPeu8X ShiQo2HnWQ7/wkynFkkWlwJ4qLwxFNYsxu+f4ctUAGBtkH8xi2uRI9XhEUZqis2i 1TJDDg3Ck71i3JDyzCjXrHyV2XVviygBbYcR+2qGt9vDa+sRA1e9DGqLV2sFyID7 R91lTDIZ1iI= =5631 -----END PGP SIGNATURE----- gpgv: Signature made Wed Oct 6 12:27:58 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./anfo_0.98-9.dsc: no acceptable signature found dpkg-source: info: extracting anfo in /<> dpkg-source: info: unpacking anfo_0.98.orig.tar.gz dpkg-source: info: unpacking anfo_0.98-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01-silence-narrowing-conversion.patch dpkg-source: info: applying 02-correct-minscore-self-initialization.patch dpkg-source: info: applying 03-include-unistd-forF_OK.patch dpkg-source: info: applying 04-reorder-template-for-new-scope-rules.patch dpkg-source: info: applying 05-autoreconf.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-622515fb-455f-4858-bbbb-679ad6bf62ff SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package anfo dpkg-buildpackage: info: source version 0.98-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/anfo.substvars debian/libanfo0.substvars debian/libanfo0-dev.substvars debian/files rm -fr -- debian/anfo/ debian/tmp/ debian/libanfo0/ debian/libanfo0-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a cp -an --reflink=auto config.guess debian/.debhelper/bucket/files/57cc3642a532babb5ec0db80ebefd7ad7dc2b110e85bdc438fe67221e6172a3f.tmp mv debian/.debhelper/bucket/files/57cc3642a532babb5ec0db80ebefd7ad7dc2b110e85bdc438fe67221e6172a3f.tmp debian/.debhelper/bucket/files/57cc3642a532babb5ec0db80ebefd7ad7dc2b110e85bdc438fe67221e6172a3f cp -f /usr/share/misc/config.guess ./config.guess cp -an --reflink=auto config.sub debian/.debhelper/bucket/files/76dae42e342b050c73d63a4c398703beecd0915d5350e8d667abcf0f746be6e2.tmp mv debian/.debhelper/bucket/files/76dae42e342b050c73d63a4c398703beecd0915d5350e8d667abcf0f746be6e2.tmp debian/.debhelper/bucket/files/76dae42e342b050c73d63a4c398703beecd0915d5350e8d667abcf0f746be6e2 cp -f /usr/share/misc/config.sub ./config.sub dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i aclocal: overwriting 'm4/libtool.m4' with '/usr/share/aclocal/libtool.m4' aclocal: overwriting 'm4/ltoptions.m4' with '/usr/share/aclocal/ltoptions.m4' aclocal: overwriting 'm4/ltversion.m4' with '/usr/share/aclocal/ltversion.m4' aclocal: overwriting 'm4/lt~obsolete.m4' with '/usr/share/aclocal/lt~obsolete.m4' aclocal: overwriting 'm4/pkg.m4' with '/usr/share/aclocal/pkg.m4' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:8: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:8: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:8: the top level configure.ac:48: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:48: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:48: the top level configure.ac:77: warning: LT_INIT was called before AM_PROG_AR aclocal.m4:70: AM_PROG_AR is expanded from... configure.ac:77: the top level configure.ac:77: installing './ar-lib' configure.ac:12: installing './compile' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mipsel-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mipsel-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.mipsel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mipsel-linux-gnu-strip... mipsel-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... x86_64-pc-linux-gnu checking host system type... mipsel-unknown-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for mipsel-linux-gnu-gcc... mipsel-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether mipsel-linux-gnu-gcc accepts -g... yes checking for mipsel-linux-gnu-gcc option to enable C11 features... none needed checking whether mipsel-linux-gnu-gcc understands -c and -o together... yes checking dependency style of mipsel-linux-gnu-gcc... none checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by mipsel-linux-gnu-gcc... /usr/mipsel-linux-gnu/bin/ld checking if the linker (/usr/mipsel-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mipsel-linux-gnu-nm -B checking the name lister (/usr/bin/mipsel-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mipsel-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mipsel-linux-gnu/bin/ld option to reload object files... -r checking for mipsel-linux-gnu-file... no checking for file... file configure: WARNING: using cross tools not prefixed with host triplet checking for mipsel-linux-gnu-objdump... mipsel-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for mipsel-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mipsel-linux-gnu-ar... mipsel-linux-gnu-ar checking for archiver @FILE support... @ checking for mipsel-linux-gnu-strip... (cached) mipsel-linux-gnu-strip checking for mipsel-linux-gnu-ranlib... mipsel-linux-gnu-ranlib checking command to parse /usr/bin/mipsel-linux-gnu-nm -B output from mipsel-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mipsel-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mipsel-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for mipsel-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if mipsel-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if mipsel-linux-gnu-gcc static flag -static works... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the mipsel-linux-gnu-gcc linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for mipsel-linux-gnu-g++... mipsel-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether mipsel-linux-gnu-g++ accepts -g... yes checking for mipsel-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of mipsel-linux-gnu-g++... none checking how to run the C++ preprocessor... mipsel-linux-gnu-g++ -E checking for ld used by mipsel-linux-gnu-g++... /usr/mipsel-linux-gnu/bin/ld checking if the linker (/usr/mipsel-linux-gnu/bin/ld) is GNU ld... yes checking whether the mipsel-linux-gnu-g++ linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking for mipsel-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if mipsel-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if mipsel-linux-gnu-g++ static flag -static works... yes checking if mipsel-linux-gnu-g++ supports -c -o file.o... yes checking if mipsel-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the mipsel-linux-gnu-g++ linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for protoc... /usr/bin/protoc checking for library containing exp... none required checking for library containing log1p... none required checking for poptGetContext in -lpopt... yes checking for deflate in -lz... yes checking for BZ2_bzCompress in -lbz2... yes checking for Elk_Init in -lelk... yes checking for popt.h... yes checking for zlib.h... yes checking for bzlib.h... yes checking for mipsel-linux-gnu-pkg-config... /usr/bin/mipsel-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for protobuf >= 2.1.0... yes checking for google/protobuf/message.h... yes checking for elk/scheme.h... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for working volatile... yes checking for _Bool... no checking for stdbool.h that conforms to C99... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... 64 checking for int32_t... yes checking for int64_t... yes checking for size_t... yes checking for ssize_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for uint8_t... yes checking for memset... yes checking for munmap... yes checking for pow... yes checking for strerror... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating man/Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands checking for mipsel-linux-gnu-ar... (cached) mipsel-linux-gnu-ar checking the archiver (mipsel-linux-gnu-ar) interface... ar dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' protoc -I. -I/usr/include --cpp_out=. config.proto [libprotobuf WARNING google/protobuf/compiler/parser.cc:646] No syntax specified for the proto file: config.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.) protoc -I. -I/usr/include --cpp_out=. output.proto [libprotobuf WARNING google/protobuf/compiler/parser.cc:646] No syntax specified for the proto file: output.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.) [libprotobuf WARNING google/protobuf/compiler/parser.cc:646] No syntax specified for the proto file: config.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.) make all-am make[4]: Entering directory '/<>/src' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fa2dna.o fa2dna.cc /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o align.lo align.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c align.cc -fPIC -DPIC -o .libs/align.o In file included from stream.h:20, from align.h:22, from align.cc:21: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from sequence.h:30, from align_fwd.h:5, from align.h:20: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c align.cc -o align.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o anfo_common.lo anfo_common.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anfo_common.cc -fPIC -DPIC -o .libs/anfo_common.o In file included from stream.h:20, from align.h:22, from anfo_common.h:22, from anfo_common.cc:21: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from sequence.h:30, from align_fwd.h:5, from align.h:20: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c anfo_common.cc -o anfo_common.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o concurrent_stream.lo concurrent_stream.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c concurrent_stream.cc -fPIC -DPIC -o .libs/concurrent_stream.o In file included from stream.h:20, from concurrent_stream.h:23, from concurrent_stream.cc:1: compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from compress_stream.h:22: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ concurrent_stream.cc: In member function ‘virtual output::Result streams::ConcurrentStream::fetch_result()’: concurrent_stream.cc:178:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 178 | auto_ptr< Result > r( outgoing_[ next_out_++ ] ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ concurrent_stream.cc: In member function ‘void streams::ConcurrentStream::dequeue(streams::Stream*)’: concurrent_stream.cc:212:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 212 | auto_ptr< Result > r( incoming_[ next_in_ ] ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c concurrent_stream.cc -o concurrent_stream.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ducttape.lo ducttape.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ducttape.cc -fPIC -DPIC -o .libs/ducttape.o In file included from stream.h:20, from ducttape.h:21, from ducttape.cc:21: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from sequence.h:30, from align_fwd.h:5, from ducttape.h:20: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ ducttape.h:139:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 139 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ducttape.cc -o ducttape.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o index.lo index.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c index.cc -fPIC -DPIC -o .libs/index.o libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c index.cc -o index.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o misc_streams.lo misc_streams.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c misc_streams.cc -fPIC -DPIC -o .libs/misc_streams.o In file included from stream.h:20, from misc_streams.h:4, from misc_streams.cc:5: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from compress_stream.h:22: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ misc_streams.cc: In constructor ‘streams::RegionFilter::RegionFilter(const std::pair*, std::__cxx11::basic_string >&)’: misc_streams.cc:489:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 489 | auto_ptr< istream > deffile( p.first ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c misc_streams.cc -o misc_streams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o output_streams.lo output_streams.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c output_streams.cc -fPIC -DPIC -o .libs/output_streams.o In file included from stream.h:20, from output_streams.h:21, from output_streams.cc:21: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/coded_stream.h:131, from config.pb.h:23, from index.h:20, from output_streams.h:20: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:45:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 45 | auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:72:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 72 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:123:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 123 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:138:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 138 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:149:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 149 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ output_streams.h:176:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 176 | std::auto_ptr< std::ostream > out_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c output_streams.cc -o output_streams.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence.lo sequence.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence.cc -fPIC -DPIC -o .libs/sequence.o In file included from stream.h:20, from sequence.cc:23: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from sequence.h:30, from sequence.cc:21: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence.cc -o sequence.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o stream.lo stream.cc libtool: compile: mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c stream.cc -fPIC -DPIC -o .libs/stream.o In file included from stream.cc:21: compress_stream.h:34:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 34 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/memory:76, from /usr/include/google/protobuf/stubs/common.h:41, from /usr/include/google/protobuf/io/zero_copy_stream.h:111, from compress_stream.h:22: /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:97:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 97 | InflateStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ), total_( 0 ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual DeflateStream::~DeflateStream()’: compress_stream.h:198:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 198 | else if( r != Z_OK ) throw zs_.msg ; | ^~~~~~~~~~~~~ compress_stream.h:198:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: At global scope: compress_stream.h:225:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 225 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h:278:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | BunzipStream( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is ) : is_( is ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ compress_stream.h: In destructor ‘virtual BzipStream::~BzipStream()’: compress_stream.h:379:54: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 379 | else if( r < BZ_OK ) throw BzipError( r ) ; | ^~~~~~~~~~~~~~~~~~~~ compress_stream.h:379:54: note: in C++11 destructors default to ‘noexcept’ compress_stream.h: In function ‘google::protobuf::io::FileOutputStream* make_output_stream(const char*)’: compress_stream.h:395:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 395 | std::auto_ptr< google::protobuf::io::FileOutputStream > fos( | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from misc_streams.h:4, from stream.cc:22: stream.h: At global scope: stream.h:319:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 319 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:323:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 323 | AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:345:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 345 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:385:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 385 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > zos_ ; // final output | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:387:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 387 | std::auto_ptr< google::protobuf::io::ArrayOutputStream > aos_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:414:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 414 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:416:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 416 | std::auto_ptr< google::protobuf::io::ArrayInputStream > ais_ ; // output to buffer | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:422:37: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 422 | ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:747:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 747 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:762:35: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 762 | FastqReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, bool solexa_scores, char origin ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:772:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 772 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:795:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 795 | SamReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& n, const string& g ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:806:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 806 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:821:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 821 | SffReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:832:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 832 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:846:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 846 | BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h:880:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 880 | std::auto_ptr< google::protobuf::io::ZeroCopyOutputStream > os_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:81:30: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | AnfoReader::AnfoReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) : is_( is ), name_( name ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc: In member function ‘virtual void streams::ChunkedWriter::put_result(const output::Result&)’: stream.cc:344:33: warning: ‘int google::protobuf::MessageLite::ByteSize() const’ is deprecated: Please use ByteSizeLong() instead [-Wdeprecated-declarations] 344 | flush_buffer( r.ByteSize() ) ; | ~~~~~~~~~~^~ In file included from /usr/include/google/protobuf/any.h:38, from /usr/include/google/protobuf/generated_message_util.h:52, from output.pb.h:26, from stream.h:22: /usr/include/google/protobuf/message_lite.h:381:7: note: declared here 381 | int ByteSize() const { return internal::ToIntSize(ByteSizeLong()); } | ^~~~~~~~ stream.cc: At global scope: stream.cc:421:36: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 421 | ChunkedReader::ChunkedReader( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const std::string& name ) : is_( is ), name_( name ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:1093:30: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1093 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is_ ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:1114:50: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1114 | StreamWithProgress( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, int64_t total ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:1149:47: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1149 | StreamHolder make_input_stream_( std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, bool solexa_scores, char origin, const string& genome ) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc: In function ‘streams::StreamHolder streams::{anonymous}::make_input_stream_(std::auto_ptr, const std::string&, bool, char, const std::string&)’: stream.cc:1179:30: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1179 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > bs( new BunzipStream( is ) ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:1189:30: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1189 | std::auto_ptr< google::protobuf::io::ZeroCopyInputStream > zs( new InflateStream( is ) ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc: In member function ‘virtual output::Header streams::UniversalReader::fetch_header()’: stream.cc:1233:30: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1233 | std::auto_ptr< google::protobuf::io::FileInputStream > s( new google::protobuf::io::FileInputStream( fd ) ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc:1238:54: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1238 | std::auto_ptr(s), name_, st.st_size ) ) ; | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.cc: At global scope: stream.cc:1378:23: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 1378 | BamReader::BamReader( auto_ptr< google::protobuf::io::ZeroCopyInputStream > is, const string& name, const string& genome ) : | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ stream.h: In instantiation of ‘void streams::write_delimited_message(google::protobuf::io::CodedOutputStream&, int, const Msg&) [with Msg = output::Header]’: stream.h:102:25: required from ‘void streams::write_delimited_message(google::protobuf::io::ZeroCopyOutputStream*, int, const Msg&) [with Msg = output::Header]’ stream.cc:322:25: required from here stream.h:88:37: warning: ‘int google::protobuf::MessageLite::ByteSize() const’ is deprecated: Please use ByteSizeLong() instead [-Wdeprecated-declarations] 88 | os.WriteVarint32( m.ByteSize() ) ; | ~~~~~~~~~~^~ /usr/include/google/protobuf/message_lite.h:381:7: note: declared here 381 | int ByteSize() const { return internal::ToIntSize(ByteSizeLong()); } | ^~~~~~~~ stream.h: In instantiation of ‘void streams::write_delimited_message(google::protobuf::io::CodedOutputStream&, int, const Msg&) [with Msg = output::Footer]’: stream.h:102:25: required from ‘void streams::write_delimited_message(google::protobuf::io::ZeroCopyOutputStream*, int, const Msg&) [with Msg = output::Footer]’ stream.cc:331:25: required from here stream.h:88:37: warning: ‘int google::protobuf::MessageLite::ByteSize() const’ is deprecated: Please use ByteSizeLong() instead [-Wdeprecated-declarations] 88 | os.WriteVarint32( m.ByteSize() ) ; | ~~~~~~~~~~^~ /usr/include/google/protobuf/message_lite.h:381:7: note: declared here 381 | int ByteSize() const { return internal::ToIntSize(ByteSizeLong()); } | ^~~~~~~~ stream.h: In instantiation of ‘void streams::write_delimited_message(google::protobuf::io::CodedOutputStream&, int, const Msg&) [with Msg = output::Result]’: stream.h:102:25: required from ‘void streams::write_delimited_message(google::protobuf::io::ZeroCopyOutputStream*, int, const Msg&) [with Msg = output::Result]’ stream.cc:345:25: required from here stream.h:88:37: warning: ‘int google::protobuf::MessageLite::ByteSize() const’ is deprecated: Please use ByteSizeLong() instead [-Wdeprecated-declarations] 88 | os.WriteVarint32( m.ByteSize() ) ; | ~~~~~~~~~~^~ /usr/include/google/protobuf/message_lite.h:381:7: note: declared here 381 | int ByteSize() const { return internal::ToIntSize(ByteSizeLong()); } | ^~~~~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/bits/refwrap.h:39, from /usr/mipsel-linux-gnu/include/c++/12/deque:65, from util.h:23, from compress_stream.h:20: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h: In instantiation of ‘constexpr bool std::less<_Tp>::operator()(const _Tp&, const _Tp&) const [with _Tp = config::Policy]’: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_tree.h:2533:33: required from ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::find(const _Key&) [with _Key = config::Policy; _Val = config::Policy; _KeyOfValue = std::_Identity; _Compare = std::less; _Alloc = std::allocator; iterator = std::_Rb_tree, std::less, std::allocator >::iterator]’ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_set.h:795:25: required from ‘std::set<_Key, _Compare, _Alloc>::iterator std::set<_Key, _Compare, _Alloc>::find(const key_type&) [with _Key = config::Policy; _Compare = std::less; _Alloc = std::allocator; iterator = std::_Rb_tree, std::less, std::allocator >::const_iterator; key_type = config::Policy]’ stream.cc:479:13: required from ‘void streams::nub(google::protobuf::RepeatedPtrField&) [with E = config::Policy]’ stream.cc:531:5: required from here /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: error: no match for ‘operator<’ (operand types are ‘const config::Policy’ and ‘const config::Policy’) 408 | { return __x < __y; } | ~~~~^~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/bits/stl_algobase.h:64, from /usr/mipsel-linux-gnu/include/c++/12/deque:60: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_pair.h:663:5: note: candidate: ‘template constexpr bool std::operator<(const pair<_T1, _T2>&, const pair<_T1, _T2>&)’ 663 | operator<(const pair<_T1, _T2>& __x, const pair<_T1, _T2>& __y) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_pair.h:663:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::pair<_T1, _T2>’ 408 | { return __x < __y; } | ~~~~^~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/bits/stl_algobase.h:67: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:451:5: note: candidate: ‘template constexpr bool std::operator<(const reverse_iterator<_Iterator>&, const reverse_iterator<_Iterator>&)’ 451 | operator<(const reverse_iterator<_Iterator>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:451:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::reverse_iterator<_Iterator>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:496:5: note: candidate: ‘template constexpr bool std::operator<(const reverse_iterator<_Iterator>&, const reverse_iterator<_IteratorR>&)’ 496 | operator<(const reverse_iterator<_IteratorL>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:496:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::reverse_iterator<_Iterator>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1683:5: note: candidate: ‘template constexpr bool std::operator<(const move_iterator<_IteratorL>&, const move_iterator<_IteratorR>&)’ 1683 | operator<(const move_iterator<_IteratorL>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1683:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::move_iterator<_IteratorL>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1748:5: note: candidate: ‘template constexpr bool std::operator<(const move_iterator<_IteratorL>&, const move_iterator<_IteratorL>&)’ 1748 | operator<(const move_iterator<_Iterator>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1748:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::move_iterator<_IteratorL>’ 408 | { return __x < __y; } | ~~~~^~~~~ In file included from /usr/mipsel-linux-gnu/include/c++/12/deque:64: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_deque.h:2330:5: note: candidate: ‘template bool std::operator<(const deque<_Tp, _Alloc>&, const deque<_Tp, _Alloc>&)’ 2330 | operator<(const deque<_Tp, _Alloc>& __x, const deque<_Tp, _Alloc>& __y) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_deque.h:2330:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const config::Policy’ is not derived from ‘const std::deque<_Tp, _Alloc>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h: In instantiation of ‘constexpr bool std::less<_Tp>::operator()(const _Tp&, const _Tp&) const [with _Tp = output::Read]’: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_tree.h:2533:33: required from ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::find(const _Key&) [with _Key = output::Read; _Val = output::Read; _KeyOfValue = std::_Identity; _Compare = std::less; _Alloc = std::allocator; iterator = std::_Rb_tree, std::less, std::allocator >::iterator]’ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_set.h:795:25: required from ‘std::set<_Key, _Compare, _Alloc>::iterator std::set<_Key, _Compare, _Alloc>::find(const key_type&) [with _Key = output::Read; _Compare = std::less; _Alloc = std::allocator; iterator = std::_Rb_tree, std::less, std::allocator >::const_iterator; key_type = output::Read]’ stream.cc:479:13: required from ‘void streams::nub(google::protobuf::RepeatedPtrField&) [with E = output::Read]’ stream.cc:612:5: required from here /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: error: no match for ‘operator<’ (operand types are ‘const output::Read’ and ‘const output::Read’) /usr/mipsel-linux-gnu/include/c++/12/bits/stl_pair.h:663:5: note: candidate: ‘template constexpr bool std::operator<(const pair<_T1, _T2>&, const pair<_T1, _T2>&)’ 663 | operator<(const pair<_T1, _T2>& __x, const pair<_T1, _T2>& __y) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_pair.h:663:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::pair<_T1, _T2>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:451:5: note: candidate: ‘template constexpr bool std::operator<(const reverse_iterator<_Iterator>&, const reverse_iterator<_Iterator>&)’ 451 | operator<(const reverse_iterator<_Iterator>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:451:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::reverse_iterator<_Iterator>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:496:5: note: candidate: ‘template constexpr bool std::operator<(const reverse_iterator<_Iterator>&, const reverse_iterator<_IteratorR>&)’ 496 | operator<(const reverse_iterator<_IteratorL>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:496:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::reverse_iterator<_Iterator>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1683:5: note: candidate: ‘template constexpr bool std::operator<(const move_iterator<_IteratorL>&, const move_iterator<_IteratorR>&)’ 1683 | operator<(const move_iterator<_IteratorL>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1683:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::move_iterator<_IteratorL>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1748:5: note: candidate: ‘template constexpr bool std::operator<(const move_iterator<_IteratorL>&, const move_iterator<_IteratorL>&)’ 1748 | operator<(const move_iterator<_Iterator>& __x, | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_iterator.h:1748:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::move_iterator<_IteratorL>’ 408 | { return __x < __y; } | ~~~~^~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_deque.h:2330:5: note: candidate: ‘template bool std::operator<(const deque<_Tp, _Alloc>&, const deque<_Tp, _Alloc>&)’ 2330 | operator<(const deque<_Tp, _Alloc>& __x, const deque<_Tp, _Alloc>& __y) | ^~~~~~~~ /usr/mipsel-linux-gnu/include/c++/12/bits/stl_deque.h:2330:5: note: template argument deduction/substitution failed: /usr/mipsel-linux-gnu/include/c++/12/bits/stl_function.h:408:20: note: ‘const output::Read’ is not derived from ‘const std::deque<_Tp, _Alloc>’ 408 | { return __x < __y; } | ~~~~^~~~~ make[4]: *** [Makefile:777: stream.lo] Error 1 make[4]: Leaving directory '/<>/src' make[3]: *** [Makefile:440: all] Error 2 make[3]: Leaving directory '/<>/src' make[2]: *** [Makefile:466: all-recursive] Error 1 make[2]: Leaving directory '/<>' make[1]: *** [Makefile:374: all] Error 2 make[1]: Leaving directory '/<>' dh_auto_build: error: make -j1 returned exit code 2 make: *** [debian/rules:12: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2023-03-26T13:40:02Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 26532 Build-Time: 70 Distribution: unstable Fail-Stage: build Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 11 Job: anfo_0.98-9 Machine Architecture: amd64 Package: anfo Package-Time: 91 Source-Version: 0.98-9 Space: 26532 Status: attempted Version: 0.98-9 -------------------------------------------------------------------------------- Finished at 2023-03-26T13:40:02Z Build needed 00:01:31, 26532k disk space