sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | bali-phy 3.6.1+dfsg-1 (mips64el) Tue, 14 Sep 2021 12:10:32 +0000 | +==============================================================================+ Package: bali-phy Version: 3.6.1+dfsg-1 Source Version: 3.6.1+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-32a496a6-490d-4e30-9ded-4d0df7034034' with '<>' I: NOTICE: Log filtering will replace 'build/bali-phy-uXFe2A/resolver-lfcpAS' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-09-14-0803.29-F-2021-09-14-0803.29.pdiff [19.1 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-09-14-0803.29-F-2021-09-14-0803.29.pdiff [19.1 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-09-14-0803.29-F-2021-09-14-0803.29.pdiff [4661 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-09-14-0803.29-F-2021-09-14-0803.29.pdiff [4661 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [8468 kB] Fetched 8784 kB in 3s (3222 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'bali-phy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/bali-phy.git Please use: git clone https://salsa.debian.org/med-team/bali-phy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1130 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main bali-phy 3.6.1+dfsg-1 (dsc) [2217 B] Get:2 http://debian.oregonstate.edu/debian unstable/main bali-phy 3.6.1+dfsg-1 (tar) [1124 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main bali-phy 3.6.1+dfsg-1 (diff) [4520 B] Fetched 1130 kB in 0s (42.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/bali-phy-uXFe2A/bali-phy-3.6.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/bali-phy-uXFe2A' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), meson, libcairo2-dev, libeigen3-dev, nlohmann-json3-dev, pandoc, libboost-dev, libboost-program-options-dev, libboost-random-dev, libboost-system-dev, libboost-filesystem-dev, libboost-chrono-dev, librange-v3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), meson, libcairo2-dev, libeigen3-dev, nlohmann-json3-dev, pandoc, libboost-dev, libboost-program-options-dev, libboost-random-dev, libboost-system-dev, libboost-filesystem-dev, libboost-chrono-dev, librange-v3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [484 B] Get:5 copy:/<>/apt_archive ./ Packages [575 B] Fetched 2016 B in 0s (79.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file fontconfig-config fonts-dejavu-core g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblkid-dev:mips64el libblkid1:mips64el libboost-chrono-dev:mips64el libboost-chrono1.74-dev:mips64el libboost-chrono1.74.0:mips64el libboost-dev:mips64el libboost-filesystem-dev:mips64el libboost-filesystem1.74-dev:mips64el libboost-filesystem1.74.0:mips64el libboost-program-options-dev:mips64el libboost-program-options1.74-dev:mips64el libboost-program-options1.74.0:mips64el libboost-random-dev:mips64el libboost-random1.74-dev:mips64el libboost-random1.74.0:mips64el libboost-system-dev:mips64el libboost-system1.74-dev:mips64el libboost-system1.74.0:mips64el libboost1.74-dev:mips64el libbrotli-dev:mips64el libbrotli1:mips64el libbsd0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcairo-gobject2:mips64el libcairo-script-interpreter2:mips64el libcairo2:mips64el libcairo2-dev:mips64el libcmark-gfm-extensions0 libcmark-gfm0 libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libeigen3-dev libelf1 libexpat1 libexpat1:mips64el libexpat1-dev:mips64el libffi-dev:mips64el libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig-dev:mips64el libfontconfig1:mips64el libfontconfig1-dev:mips64el libfreetype-dev:mips64el libfreetype6:mips64el libfreetype6-dev:mips64el libgcc-10-dev:mips64el libgcc-10-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libglib2.0-0 libglib2.0-0:mips64el libglib2.0-bin libglib2.0-data libglib2.0-dev:mips64el libglib2.0-dev-bin libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libice-dev:mips64el libice6:mips64el libicu67 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl liblzo2-2:mips64el libmagic-mgc libmagic1 libmd0:mips64el libmount-dev:mips64el libmount1:mips64el libmpdec3 libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libpcre16-3:mips64el libpcre2-16-0:mips64el libpcre2-32-0:mips64el libpcre2-8-0:mips64el libpcre2-dev:mips64el libpcre2-posix2:mips64el libpcre3:mips64el libpcre3-dev:mips64el libpcre32-3:mips64el libpcrecpp0v5:mips64el libperl5.32 libpipeline1 libpixman-1-0:mips64el libpixman-1-dev:mips64el libpng-dev:mips64el libpng16-16:mips64el libpthread-stubs0-dev:mips64el libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librange-v3-dev libselinux1:mips64el libselinux1-dev:mips64el libsepol1:mips64el libsepol1-dev:mips64el libsigsegv2 libsm-dev:mips64el libsm6:mips64el libsqlite3-0 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev:mips64el libstdc++-10-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libuuid1:mips64el libx11-6:mips64el libx11-data libx11-dev:mips64el libxau-dev:mips64el libxau6:mips64el libxcb-render0:mips64el libxcb-render0-dev:mips64el libxcb-shm0:mips64el libxcb-shm0-dev:mips64el libxcb1:mips64el libxcb1-dev:mips64el libxdmcp-dev:mips64el libxdmcp6:mips64el libxext-dev:mips64el libxext6:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxrender-dev:mips64el libxrender1:mips64el libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db media-types meson ninja-build nlohmann-json3-dev pandoc pandoc-data perl perl-modules-5.32 pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3.9 python3.9-minimal rpcsvc-proto sensible-utils ucf uuid-dev:mips64el x11-common x11proto-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-mips64el-linux-gnuabi64 gcc-10-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff libboost-doc:mips64el libboost1.74-doc:mips64el libboost-atomic1.74-dev:mips64el libboost-container1.74-dev:mips64el libboost-context1.74-dev:mips64el libboost-contract1.74-dev:mips64el libboost-coroutine1.74-dev:mips64el libboost-date-time1.74-dev:mips64el libboost-exception1.74-dev:mips64el libboost-fiber1.74-dev:mips64el libboost-graph1.74-dev:mips64el libboost-graph-parallel1.74-dev:mips64el libboost-iostreams1.74-dev:mips64el libboost-locale1.74-dev:mips64el libboost-log1.74-dev:mips64el libboost-math1.74-dev:mips64el libboost-mpi1.74-dev:mips64el libboost-mpi-python1.74-dev:mips64el libboost-numpy1.74-dev:mips64el libboost-python1.74-dev:mips64el libboost-regex1.74-dev:mips64el libboost-serialization1.74-dev:mips64el libboost-stacktrace1.74-dev:mips64el libboost-test1.74-dev:mips64el libboost-thread1.74-dev:mips64el libboost-timer1.74-dev:mips64el libboost-type-erasure1.74-dev:mips64el libboost-wave1.74-dev:mips64el libboost1.74-tools-dev:mips64el libmpfrc++-dev:mips64el libntl-dev:mips64el libboost-nowide1.74-dev:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el libnss-nis:mips64el libnss-nisplus:mips64el glibc-doc manpages-dev:mips64el libcairo2-doc:mips64el gnupg git bzr libeigen3-doc libmpfrc++-dev freetype2-doc:mips64el libgirepository1.0-dev:mips64el libglib2.0-doc:mips64el libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils krb5-doc:mips64el krb5-user:mips64el libice-doc:mips64el cryptsetup-bin:mips64el libsm-doc:mips64el libstdc++-10-doc libstdc++-10-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libx11-doc:mips64el libxcb-doc:mips64el libxext-doc:mips64el libyaml-shell-perl m4-doc apparmor less www-browser texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin ghc nodejs php python ruby r-base-core libjs-mathjax node-katex citation-style-language-styles perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl python3-doc python3-tk python3-venv python3-setuptools python3.9-venv python3.9-doc binfmt-support Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:mips64el libfile-fcntllock-perl libarchive-cpio-perl shared-mime-info xdg-user-dirs shared-mime-info:mips64el xdg-user-dirs:mips64el krb5-locales:mips64el libpng-tools:mips64el ca-certificates librange-v3-doc libltdl-dev uuid-runtime:mips64el libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-10-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file fontconfig-config fonts-dejavu-core g++ g++-10 g++-10-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-10-mips64el-linux-gnuabi64 gcc-10-mips64el-linux-gnuabi64-base gcc-11-base:mips64el gcc-11-cross-base-mipsen gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libblkid-dev:mips64el libblkid1:mips64el libboost-chrono-dev:mips64el libboost-chrono1.74-dev:mips64el libboost-chrono1.74.0:mips64el libboost-dev:mips64el libboost-filesystem-dev:mips64el libboost-filesystem1.74-dev:mips64el libboost-filesystem1.74.0:mips64el libboost-program-options-dev:mips64el libboost-program-options1.74-dev:mips64el libboost-program-options1.74.0:mips64el libboost-random-dev:mips64el libboost-random1.74-dev:mips64el libboost-random1.74.0:mips64el libboost-system-dev:mips64el libboost-system1.74-dev:mips64el libboost-system1.74.0:mips64el libboost1.74-dev:mips64el libbrotli-dev:mips64el libbrotli1:mips64el libbsd0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcairo-gobject2:mips64el libcairo-script-interpreter2:mips64el libcairo2:mips64el libcairo2-dev:mips64el libcmark-gfm-extensions0 libcmark-gfm0 libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libeigen3-dev libelf1 libexpat1 libexpat1:mips64el libexpat1-dev:mips64el libffi-dev:mips64el libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig-dev:mips64el libfontconfig1:mips64el libfontconfig1-dev:mips64el libfreetype-dev:mips64el libfreetype6:mips64el libfreetype6-dev:mips64el libgcc-10-dev:mips64el libgcc-10-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libglib2.0-0 libglib2.0-0:mips64el libglib2.0-bin libglib2.0-data libglib2.0-dev:mips64el libglib2.0-dev-bin libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libice-dev:mips64el libice6:mips64el libicu67 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl liblzo2-2:mips64el libmagic-mgc libmagic1 libmd0:mips64el libmount-dev:mips64el libmount1:mips64el libmpdec3 libnsl-dev libnsl-dev:mips64el libnsl2:mips64el libpcre16-3:mips64el libpcre2-16-0:mips64el libpcre2-32-0:mips64el libpcre2-8-0:mips64el libpcre2-dev:mips64el libpcre2-posix2:mips64el libpcre3:mips64el libpcre3-dev:mips64el libpcre32-3:mips64el libpcrecpp0v5:mips64el libperl5.32 libpipeline1 libpixman-1-0:mips64el libpixman-1-dev:mips64el libpng-dev:mips64el libpng16-16:mips64el libpthread-stubs0-dev:mips64el libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librange-v3-dev libselinux1:mips64el libselinux1-dev:mips64el libsepol1:mips64el libsepol1-dev:mips64el libsigsegv2 libsm-dev:mips64el libsm6:mips64el libsqlite3-0 libssl1.1:mips64el libstdc++-10-dev libstdc++-10-dev:mips64el libstdc++-10-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libuuid1:mips64el libx11-6:mips64el libx11-data libx11-dev:mips64el libxau-dev:mips64el libxau6:mips64el libxcb-render0:mips64el libxcb-render0-dev:mips64el libxcb-shm0:mips64el libxcb-shm0-dev:mips64el libxcb1:mips64el libxcb1-dev:mips64el libxdmcp-dev:mips64el libxdmcp6:mips64el libxext-dev:mips64el libxext6:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxrender-dev:mips64el libxrender1:mips64el libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db media-types meson ninja-build nlohmann-json3-dev pandoc pandoc-data perl perl-modules-5.32 pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3.9 python3.9-minimal rpcsvc-proto sbuild-build-depends-main-dummy:mips64el sensible-utils ucf uuid-dev:mips64el x11-common x11proto-dev x11proto-xext-dev xorg-sgml-doctools xtrans-dev zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 227 newly installed, 0 to remove and 0 not upgraded. Need to get 157 MB of archives. After this operation, 854 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-2 [142 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-5 [2823 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-5 [4125 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-5 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-minimal amd64 3.9.7-2 [804 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.1-2 [104 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9-minimal amd64 3.9.7-2 [1964 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 media-types all 4.0.0 [30.3 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-stdlib amd64 3.9.7-2 [1687 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9 amd64 3.9.7-2 [480 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10.3.0-10 [205 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-11-base mips64el 11.2.0-5 [205 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.4-2 [819 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.37-4cross4 [2447 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.25-2 [104 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-2 [2255 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.3.0-10 [1751 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.3.0-10 [9435 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64-base amd64 10.2.1-6cross1 [202 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [6982 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [16.9 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10.2.1-6cross1 [197 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base-mipsen all 11.2.0-3cross1 [200 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.32-1cross3 [1316 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 11.2.0-3cross1 [70.1 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 11.2.0-3cross1 [92.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 11.2.0-3cross1 [7364 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-mips64el-cross all 10.2.1-6cross1 [270 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [13.6 MB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1480 B] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 11.2.0-3cross1 [467 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.10.46-4cross3 [1460 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.32-1cross3 [2104 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-mips64el-cross all 10.2.1-6cross1 [1768 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-mips64el-linux-gnuabi64 amd64 10.2.1-6cross1 [7656 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:10.2.0-1 [1192 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-4 [696 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.1 [192 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.1 [1056 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 11.2.0-5 [69.8 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.32-2 [2554 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 11.2.0-5 [7456 B] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libblkid1 mips64el 2.37.2-2 [191 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.10.46-4 [1356 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.25-2 [95.0 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.25-2 [114 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.46.4-1 [75.0 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.18.3-7 [63.5 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.18.3-7 [120 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1l-1 [1151 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.18.3-7 [329 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.18.3-7 [150 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc3 mips64el 1.3.2-2 [74.4 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el libtirpc-dev mips64el 1.3.2-2 [199 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.32-2 [2107 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el libuuid1 mips64el 2.37.2-2 [84.8 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el uuid-dev mips64el 2.37.2-2 [97.7 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mips64el libblkid-dev mips64el 2.37.2-2 [251 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 11.2.0-5 [94.5 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-10-dev mips64el 10.3.0-10 [269 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 11.2.0-5 [509 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-10-dev mips64el 10.3.0-10 [1797 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mips64el libboost1.74-dev mips64el 1.74.0-9 [9534 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-chrono1.74.0 mips64el 1.74.0-9 [252 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-chrono1.74-dev mips64el 1.74.0-9 [260 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-chrono-dev mips64el 1.74.0.3 [4956 B] Get:128 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-dev mips64el 1.74.0.3 [4548 B] Get:129 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem1.74.0 mips64el 1.74.0-9 [279 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system1.74.0 mips64el 1.74.0-9 [242 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system1.74-dev mips64el 1.74.0-9 [243 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem1.74-dev mips64el 1.74.0-9 [310 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-filesystem-dev mips64el 1.74.0.3 [4368 B] Get:134 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options1.74.0 mips64el 1.74.0-9 [339 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options1.74-dev mips64el 1.74.0-9 [400 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-program-options-dev mips64el 1.74.0.3 [4344 B] Get:137 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-random1.74.0 mips64el 1.74.0-9 [250 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-random1.74-dev mips64el 1.74.0-9 [255 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-random-dev mips64el 1.74.0.3 [4340 B] Get:140 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-system-dev mips64el 1.74.0.3 [4472 B] Get:141 http://debian.oregonstate.edu/debian unstable/main mips64el libbrotli1 mips64el 1.0.9-2+b2 [289 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main mips64el libbrotli-dev mips64el 1.0.9-2+b2 [308 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main mips64el libmd0 mips64el 1.0.3-3 [27.8 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main mips64el libbsd0 mips64el 0.11.3-1 [106 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main mips64el libexpat1 mips64el 2.4.1-2 [100 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main mips64el libpng16-16 mips64el 1.6.37-3 [287 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main mips64el libfreetype6 mips64el 2.10.4+dfsg-1 [396 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main mips64el libfontconfig1 mips64el 2.13.1-4.2 [347 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main mips64el libpixman-1-0 mips64el 0.40.0-1 [480 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main mips64el libxau6 mips64el 1:1.0.9-1 [19.6 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main mips64el libxdmcp6 mips64el 1:1.1.2-3 [26.1 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb1 mips64el 1.14-3 [132 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.7.2-1 [311 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main mips64el libx11-6 mips64el 2:1.7.2-1 [726 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb-render0 mips64el 1.14-3 [109 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb-shm0 mips64el 1.14-3 [101 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main mips64el libxext6 mips64el 2:1.3.3-1.1 [49.6 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main mips64el libxrender1 mips64el 1:0.9.10-1 [31.6 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main mips64el libcairo2 mips64el 1.16.0-5 [648 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main mips64el libffi7 mips64el 3.3-6 [22.6 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre2-8-0 mips64el 10.36-2 [158 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main mips64el libselinux1 mips64el 3.1-3 [79.7 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main mips64el libmount1 mips64el 2.37.2-2 [198 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre3 mips64el 2:8.39-13 [333 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main mips64el libglib2.0-0 mips64el 2.68.4-1 [1180 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main mips64el libcairo-gobject2 mips64el 1.16.0-5 [124 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main mips64el liblzo2-2 mips64el 2.10-2 [51.0 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main mips64el libcairo-script-interpreter2 mips64el 1.16.0-5 [160 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main mips64el libexpat1-dev mips64el 2.4.1-2 [158 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-2 [191 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main mips64el libpng-dev mips64el 1.6.37-3 [305 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main mips64el libfreetype-dev mips64el 2.10.4+dfsg-1 [585 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main mips64el libfreetype6-dev mips64el 2.10.4+dfsg-1 [82.4 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.68.4-1 [1390 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main mips64el libfontconfig-dev mips64el 2.13.1-4.2 [382 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main mips64el libfontconfig1-dev mips64el 2.13.1-4.2 [238 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-dev all 2020.1-1 [594 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main mips64el libxau-dev mips64el 1:1.0.9-1 [23.5 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main mips64el libxdmcp-dev mips64el 1:1.1.2-3 [42.9 kB] Get:183 http://debian.oregonstate.edu/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:184 http://debian.oregonstate.edu/debian unstable/main mips64el libpthread-stubs0-dev mips64el 0.4-1 [5352 B] Get:185 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb1-dev mips64el 1.14-3 [180 kB] Get:186 http://debian.oregonstate.edu/debian unstable/main mips64el libx11-dev mips64el 2:1.7.2-1 [858 kB] Get:187 http://debian.oregonstate.edu/debian unstable/main mips64el libxrender-dev mips64el 1:0.9.10-1 [41.6 kB] Get:188 http://debian.oregonstate.edu/debian unstable/main amd64 x11proto-xext-dev all 2020.1-1 [3404 B] Get:189 http://debian.oregonstate.edu/debian unstable/main mips64el libxext-dev mips64el 2:1.3.3-1.1 [110 kB] Get:190 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+23 [252 kB] Get:191 http://debian.oregonstate.edu/debian unstable/main mips64el libice6 mips64el 2:1.0.10-1 [53.0 kB] Get:192 http://debian.oregonstate.edu/debian unstable/main mips64el libsm6 mips64el 2:1.2.3-1 [33.6 kB] Get:193 http://debian.oregonstate.edu/debian unstable/main mips64el libice-dev mips64el 2:1.0.10-1 [69.2 kB] Get:194 http://debian.oregonstate.edu/debian unstable/main mips64el libsm-dev mips64el 2:1.2.3-1 [38.6 kB] Get:195 http://debian.oregonstate.edu/debian unstable/main mips64el libpixman-1-dev mips64el 0.40.0-1 [516 kB] Get:196 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb-render0-dev mips64el 1.14-3 [115 kB] Get:197 http://debian.oregonstate.edu/debian unstable/main mips64el libxcb-shm0-dev mips64el 1.14-3 [103 kB] Get:198 http://debian.oregonstate.edu/debian unstable/main mips64el libffi-dev mips64el 3.3-6 [58.3 kB] Get:199 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-data all 2.68.4-1 [1190 kB] Get:200 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-bin amd64 2.68.4-1 [145 kB] Get:201 http://debian.oregonstate.edu/debian unstable/main amd64 python3-lib2to3 all 3.9.7-1 [79.4 kB] Get:202 http://debian.oregonstate.edu/debian unstable/main amd64 python3-distutils all 3.9.7-1 [146 kB] Get:203 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-dev-bin amd64 2.68.4-1 [183 kB] Get:204 http://debian.oregonstate.edu/debian unstable/main mips64el libsepol1 mips64el 3.1-1 [235 kB] Get:205 http://debian.oregonstate.edu/debian unstable/main mips64el libsepol1-dev mips64el 3.1-1 [365 kB] Get:206 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre2-16-0 mips64el 10.36-2 [146 kB] Get:207 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre2-32-0 mips64el 10.36-2 [139 kB] Get:208 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre2-posix2 mips64el 10.36-2 [49.0 kB] Get:209 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre2-dev mips64el 10.36-2 [548 kB] Get:210 http://debian.oregonstate.edu/debian unstable/main mips64el libselinux1-dev mips64el 3.1-3 [177 kB] Get:211 http://debian.oregonstate.edu/debian unstable/main mips64el libmount-dev mips64el 2.37.2-2 [78.7 kB] Get:212 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre16-3 mips64el 2:8.39-13 [246 kB] Get:213 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre32-3 mips64el 2:8.39-13 [238 kB] Get:214 http://debian.oregonstate.edu/debian unstable/main mips64el libpcrecpp0v5 mips64el 2:8.39-13 [152 kB] Get:215 http://debian.oregonstate.edu/debian unstable/main mips64el libpcre3-dev mips64el 2:8.39-13 [636 kB] Get:216 http://debian.oregonstate.edu/debian unstable/main mips64el libglib2.0-dev mips64el 2.68.4-1 [1730 kB] Get:217 http://debian.oregonstate.edu/debian unstable/main mips64el libcairo2-dev mips64el 1.16.0-5 [787 kB] Get:218 http://debian.oregonstate.edu/debian unstable/main amd64 libcmark-gfm0 amd64 0.29.0.gfm.0-6 [117 kB] Get:219 http://debian.oregonstate.edu/debian unstable/main amd64 libcmark-gfm-extensions0 amd64 0.29.0.gfm.0-6 [46.1 kB] Get:220 http://debian.oregonstate.edu/debian unstable/main amd64 libeigen3-dev all 3.3.9-2 [858 kB] Get:221 http://debian.oregonstate.edu/debian unstable/main amd64 librange-v3-dev all 0.11.0-1 [221 kB] Get:222 http://debian.oregonstate.edu/debian unstable/main amd64 ninja-build amd64 1.10.1-1 [112 kB] Get:223 http://debian.oregonstate.edu/debian unstable/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get:224 http://debian.oregonstate.edu/debian unstable/main amd64 meson all 0.59.1-1 [495 kB] Get:225 http://debian.oregonstate.edu/debian unstable/main amd64 nlohmann-json3-dev all 3.10.2-1 [714 kB] Get:226 http://debian.oregonstate.edu/debian unstable/main amd64 pandoc-data all 2.9.2.1-1 [376 kB] Get:227 http://debian.oregonstate.edu/debian unstable/main amd64 pandoc amd64 2.9.2.1-1+b1 [18.5 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 157 MB in 2s (102 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10514 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.37.2-2_amd64.deb ... Unpacking bsdextrautils (2.37.2-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../05-perl-modules-5.32_5.32.1-5_all.deb ... Unpacking perl-modules-5.32 (5.32.1-5) ... 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Setting up libpython3.9-minimal:amd64 (3.9.7-2) ... Setting up libexpat1:amd64 (2.4.1-2) ... Setting up python3.9-minimal (3.9.7-2) ... Selecting previously unselected package python3-minimal. (Reading database ... 13351 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../3-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../4-libpython3.9-stdlib_3.9.7-2_amd64.deb ... 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Setting up bsdextrautils (2.37.2-2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.68.4-1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.1-5) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of restart. Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:mips64el (5.10.46-4) ... Setting up libc6-mips64el-cross (2.32-1cross3) ... Setting up gettext-base (0.21-4) ... Setting up gcc-10-mips64el-linux-gnuabi64-base:amd64 (10.2.1-6cross1) ... Setting up file (1:5.39-3) ... Setting up cpp-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.37-4cross4) ... 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Setting up perl (5.32.1-5) ... Setting up pandoc (2.9.2.1-1+b1) ... Setting up libc6-dev-mips64el-cross (2.32-1cross3) ... Setting up libgcc-10-dev-mips64el-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.71-2) ... Setting up libstdc++6-mips64el-cross (11.2.0-3cross1) ... Setting up libstdc++-10-dev-mips64el-cross (10.2.1-6cross1) ... Setting up x11proto-xext-dev (2020.1-1) ... Setting up g++ (4:10.2.1-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.14-1) ... Setting up gcc-10-mips64el-linux-gnuabi64 (10.2.1-6cross1) ... Setting up groff-base (1.22.4-7) ... Setting up libsub-override-perl (0.09-2) ... Setting up python3.9 (3.9.7-2) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up libarchive-zip-perl (1.68-1) ... 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Setting up libpcre16-3:mips64el (2:8.39-13) ... Setting up libice-dev:mips64el (2:1.0.10-1) ... Setting up libxcb-render0:mips64el (1.14-3) ... Setting up libboost-program-options1.74.0:mips64el (1.74.0-9) ... Setting up libssl1.1:mips64el (1.1.1l-1) ... Setting up libbrotli1:mips64el (1.0.9-2+b2) ... Setting up libffi7:mips64el (3.3-6) ... Setting up libsepol1-dev:mips64el (3.1-1) ... Setting up liblzo2-2:mips64el (2.10-2) ... Setting up libboost-filesystem1.74.0:mips64el (1.74.0-9) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libcrypt1:mips64el (1:4.4.25-2) ... Setting up libxcb-shm0:mips64el (1.14-3) ... Setting up libcom-err2:mips64el (1.46.4-1) ... Setting up libgomp1:mips64el (11.2.0-5) ... Setting up libffi-dev:mips64el (3.3-6) ... Setting up libpcre2-16-0:mips64el (10.36-2) ... Setting up libkrb5support0:mips64el (1.18.3-7) ... Setting up libxdmcp-dev:mips64el (1:1.1.2-3) ... Setting up libpcre3:mips64el (2:8.39-13) ... Setting up libpcre2-32-0:mips64el (10.36-2) ... Setting up libpng16-16:mips64el (1.6.37-3) ... Setting up libpcre32-3:mips64el (2:8.39-13) ... Setting up libatomic1:mips64el (11.2.0-5) ... Setting up libuuid1:mips64el (2.37.2-2) ... Setting up libboost-random1.74.0:mips64el (1.74.0-9) ... Setting up libpcre2-8-0:mips64el (10.36-2) ... Setting up libk5crypto3:mips64el (1.18.3-7) ... Setting up libcrypt-dev:mips64el (1:4.4.25-2) ... Setting up libx11-6:mips64el (2:1.7.2-1) ... Setting up libkrb5-3:mips64el (1.18.3-7) ... Setting up libsm6:mips64el (2:1.2.3-1) ... Setting up libbrotli-dev:mips64el (1.0.9-2+b2) ... Setting up libpcrecpp0v5:mips64el (2:8.39-13) ... Setting up libxcb1-dev:mips64el (1.14-3) ... Setting up libxrender1:mips64el (1:0.9.10-1) ... Setting up libsm-dev:mips64el (2:1.2.3-1) ... Setting up libgcc-10-dev:mips64el (10.3.0-10) ... Setting up libx11-dev:mips64el (2:1.7.2-1) ... Setting up libxext6:mips64el (2:1.3.3-1.1) ... Setting up libselinux1:mips64el (3.1-3) ... 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Setting up libboost-filesystem1.74-dev:mips64el (1.74.0-9) ... Setting up libboost-filesystem-dev:mips64el (1.74.0.3) ... Setting up libblkid-dev:mips64el (2.37.2-2) ... Setting up libboost-chrono-dev:mips64el (1.74.0.3) ... Setting up libboost-system-dev:mips64el (1.74.0.3) ... Setting up libpng-dev:mips64el (1.6.37-3) ... Setting up libboost-random-dev:mips64el (1.74.0.3) ... Setting up libfreetype-dev:mips64el (2.10.4+dfsg-1) ... Setting up libmount-dev:mips64el (2.37.2-2) ... Setting up libfreetype6-dev:mips64el (2.10.4+dfsg-1) ... Setting up libglib2.0-dev:mips64el (2.68.4-1) ... Setting up libfontconfig-dev:mips64el (2.13.1-4.2) ... Setting up libcairo2-dev:mips64el (1.16.0-5) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Setting up libfontconfig1-dev:mips64el (2.13.1-4.2) ... Processing triggers for libc-bin (2.32-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-5 dpkg-dev_1.20.9 g++-10_10.3.0-10 gcc-10_10.3.0-10 libc6-dev_2.32-2 libstdc++-10-dev_10.3.0-10 libstdc++-10-dev-mips64el-cross_10.2.1-6cross1 libstdc++6_11.2.0-5 libstdc++6-mips64el-cross_11.2.0-3cross1 linux-libc-dev_5.10.46-4 Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.51 bash_5.1-3+b1 binutils_2.37-5 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passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-5 perl-base_5.32.1-5 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-5 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 python3_3.9.2-3 python3-distutils_3.9.7-1 python3-lib2to3_3.9.7-1 python3-minimal_3.9.2-3 python3-pkg-resources_52.0.0-4 python3.9_3.9.7-2 python3.9-minimal_3.9.7-2 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 util-linux_2.37.2-2 uuid-dev_2.37.2-2 x11-common_1:7.7+23 x11proto-dev_2020.1-1 x11proto-xext-dev_2020.1-1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: bali-phy Binary: bali-phy Architecture: any Version: 3.6.1+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Benjamin Redelings Homepage: http://www.bali-phy.org Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/bali-phy Vcs-Git: https://salsa.debian.org/med-team/bali-phy.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), meson, libcairo2-dev, libeigen3-dev, nlohmann-json3-dev, pandoc, libboost-dev, libboost-program-options-dev, libboost-random-dev, libboost-system-dev, libboost-filesystem-dev, libboost-chrono-dev, librange-v3-dev Package-List: bali-phy deb science optional arch=any Checksums-Sha1: f6cbedcf2981f695f8668dba426400bb0386e2e0 1123724 bali-phy_3.6.1+dfsg.orig.tar.xz b7edc4f57630d014d4e17e551bc935b87d5ad55a 4520 bali-phy_3.6.1+dfsg-1.debian.tar.xz Checksums-Sha256: 7058c49182c0fd30b0d32357d186b5d8c7afce60a76aea0a0ba44b45ad68c939 1123724 bali-phy_3.6.1+dfsg.orig.tar.xz 3920ee3bb2b4091bc0d9d305c371abc5207e0488c009e2f53fe42e217b6ce588 4520 bali-phy_3.6.1+dfsg-1.debian.tar.xz Files: 231a9b8dcc248d56d91c1f87d4dd44eb 1123724 bali-phy_3.6.1+dfsg.orig.tar.xz 66749f710521d028f49c9031df7c9fc8 4520 bali-phy_3.6.1+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmEtI5gRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFoTQ//YymJM1PkhCmGrsPYyZc6lGpA5HENnOt/ IOlDnNvZy8KA5Y2dsM/pVtPgaG8r7GYpXJr7SwolmZutSGWYSQPnvfuSRrCpWjcS HKTUpvfVf5FFiB/WED3SfV4BUr0J/vgiv8e1f/OaQ9e0zICzzZ38I89bNMbbNvtO NeJGmr6FDgfiUoyoJNIfo8VRmuuukzQ/adWACGWwprpx5E2ofzKE4eMCAy3E+Vuy rNvaQrSv9Dpt+Zu9BlqMTMXw5RVJ9H3VaOdjHnurb2xRGW3uxtwByNuEsDn3mWAL PuQGceu/amKPOAoV4tcuvEQhFWDEz6A9hEx3QfRoFTcL0sklS+2JAA6pkCkVE4bl 2+7oRNYspmcmenfSFL/d3oKGR4XQTwil083zKgp4YwO8jbjsRr5QDoq7kSdy4UCo I+ph7KlpapL9kl7i2mOCDuaFxbI0DgMl+mu/bjB3MKoxZTn55OMM0CAbdNd83EvH pECXZQ0W6jg1PI/Wt3OYOio75sulWFkkWoeS/qLykirgL1H1yFCjxKm5BPCket0s 88QxHLjhYZ1hLZbe2w9n//66c5S2qkySMLk1vJ1s/jAi8xEucbx7sap23ptbA1+A Vj2haucObWGm5jFBI6F5OcRsjzz+GDqkh+/crtd57D9jqAiMzBYf5qlw26sDkc1k 3UvYdZDmeUs= =pBK4 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.KkODXYhw/trustedkeys.kbx': General error gpgv: Signature made Mon Aug 30 18:29:44 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bali-phy_3.6.1+dfsg-1.dsc dpkg-source: info: extracting bali-phy in /<> dpkg-source: info: unpacking bali-phy_3.6.1+dfsg.orig.tar.xz dpkg-source: info: unpacking bali-phy_3.6.1+dfsg-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-32a496a6-490d-4e30-9ded-4d0df7034034 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package bali-phy dpkg-buildpackage: info: source version 3.6.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean --buildsystem=meson dh_auto_clean -O--buildsystem=meson dh_autoreconf_clean -O--buildsystem=meson dh_clean -O--buildsystem=meson debian/rules binary-arch dh binary-arch --buildsystem=meson dh_update_autotools_config -a -O--buildsystem=meson dh_autoreconf -a -O--buildsystem=meson debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -Dextra-tools=false --buildtype=release -Db_ndebug=true cd obj-mips64el-linux-gnuabi64 && LC_ALL=C.UTF-8 meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/mips64el-linux-gnuabi64 --cross-file /<>/bali-phy-3.6.1\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf -Dextra-tools=false --buildtype=release -Db_ndebug=true DEPRECATION: c_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: c_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. The Meson build system Version: 0.59.1 Source dir: /<> Build dir: /<>/obj-mips64el-linux-gnuabi64 Build type: cross build Project name: bali-phy Project version: 3.6.1 C compiler for the host machine: /usr/bin/mips64el-linux-gnuabi64-gcc (gcc 10.2.1 "mips64el-linux-gnuabi64-gcc (Debian 10.2.1-6) 10.2.1 20210110") C linker for the host machine: /usr/bin/mips64el-linux-gnuabi64-gcc ld.bfd 2.37 C++ compiler for the host machine: /usr/bin/mips64el-linux-gnuabi64-g++ (gcc 10.2.1 "mips64el-linux-gnuabi64-g++ (Debian 10.2.1-6) 10.2.1 20210110") C++ linker for the host machine: /usr/bin/mips64el-linux-gnuabi64-g++ ld.bfd 2.37 C compiler for the build machine: cc (gcc 10.3.0 "cc (Debian 10.3.0-10) 10.3.0") C linker for the build machine: cc ld.bfd 2.37 C++ compiler for the build machine: c++ (gcc 10.3.0 "c++ (Debian 10.3.0-10) 10.3.0") C++ linker for the build machine: c++ ld.bfd 2.37 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: mips64 Host machine cpu: mips64 Target machine cpu family: mips64 Target machine cpu: mips64 Has header "sys/resource.h" : YES Has header "fenv.h" : YES Checking for function "log2" : YES Checking for function "feenableexcept" : YES Configuring config.h using configuration Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-maybe-uninitialized: YES Compiler for C++ supports arguments -Woverloaded-virtual: YES Compiler for C++ supports arguments -Wstrict-aliasing: YES Compiler for C++ supports arguments -Wno-unknown-pragmas: YES Compiler for C++ supports arguments -fdiagnostics-show-template-tree: YES Compiler for C++ supports arguments -funroll-loops: YES Compiler for C++ supports arguments -fno-math-errno: YES Compiler for C++ supports arguments -fno-signed-zeros: YES Run-time dependency threads found: YES Found pkg-config: /usr/bin/mips64el-linux-gnuabi64-pkg-config (0.29.2) Run-time dependency cairo found: YES 1.16.0 Run-time dependency Boost (found: chrono, filesystem, program_options, random, system) found: YES 1.74.0 (/usr) Run-time dependency eigen3 found: YES 3.3.9 Has header "nlohmann/json.hpp" : YES Library dl found: YES Has header "range/v3/view/take.hpp" : YES Library m found: YES Program /usr/bin/meson found: YES (/usr/bin/meson) Program pandoc found: YES (/usr/bin/pandoc) Program /<>/tests/run-tests.py found: YES (/<>/tests/run-tests.py) Build targets in project: 87 bali-phy 3.6.1 Architecture host : linux Libraries BOOST : system Eigen : system nlohmann::json: system range v3 : system cairo : system Directories prefix : /usr Configuration optimization : 3 debug : False assertions : disabled Option b_ndebug is: true [default: if-release] Found ninja-1.10.1 at /usr/bin/ninja make[1]: Leaving directory '/<>' dh_auto_build -a -O--buildsystem=meson cd obj-mips64el-linux-gnuabi64 && LC_ALL=C.UTF-8 ninja -j1 -v [1/297] /usr/bin/meson --internal vcstagger ../src/git-version.h.in src/git-version.h '' /<>/src @git_message@ '(.*)' /<>/src/git log -n1 '--date=format:%b %d %Y %k:%M:%S' '--pretty=format:[%D commit %h] (%cd)' [2/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/string_pred.cc.o -MF src/util/libutil.a.p/string_pred.cc.o.d -o src/util/libutil.a.p/string_pred.cc.o -c 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/usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/string_strip.cc.o -MF src/util/libutil.a.p/string_strip.cc.o.d -o src/util/libutil.a.p/string_strip.cc.o -c ../src/util/string/strip.cc [5/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/string_split.cc.o -MF src/util/libutil.a.p/string_split.cc.o.d -o src/util/libutil.a.p/string_split.cc.o -c ../src/util/string/split.cc [6/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/log-level.cc.o -MF src/util/libutil.a.p/log-level.cc.o.d -o src/util/libutil.a.p/log-level.cc.o -c ../src/util/log-level.cc [7/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/io.cc.o -MF src/util/libutil.a.p/io.cc.o.d -o src/util/libutil.a.p/io.cc.o -c ../src/util/io.cc [8/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/graph.cc.o -MF src/util/libutil.a.p/graph.cc.o.d -o src/util/libutil.a.p/graph.cc.o -c ../src/util/graph.cc [9/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/range.cc.o -MF src/util/libutil.a.p/range.cc.o.d -o src/util/libutil.a.p/range.cc.o -c ../src/util/range.cc [10/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/demangle.cc.o -MF src/util/libutil.a.p/demangle.cc.o.d -o src/util/libutil.a.p/demangle.cc.o -c ../src/util/demangle.cc [11/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/mapping.cc.o -MF src/util/libutil.a.p/mapping.cc.o.d -o src/util/libutil.a.p/mapping.cc.o -c ../src/util/mapping.cc [12/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 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src/util/libutil.a.p/rng.cc.o -MF src/util/libutil.a.p/rng.cc.o.d -o src/util/libutil.a.p/rng.cc.o -c ../src/util/rng.cc [14/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/permute.cc.o -MF src/util/libutil.a.p/permute.cc.o.d -o src/util/libutil.a.p/permute.cc.o 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-Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/ptree.cc.o -MF src/util/libutil.a.p/ptree.cc.o.d -o src/util/libutil.a.p/ptree.cc.o -c ../src/util/ptree.cc [17/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/text.cc.o -MF src/util/libutil.a.p/text.cc.o.d -o src/util/libutil.a.p/text.cc.o -c ../src/util/text.cc [18/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/myexception.cc.o -MF src/util/libutil.a.p/myexception.cc.o.d -o src/util/libutil.a.p/myexception.cc.o -c ../src/util/myexception.cc [19/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/time.cc.o -MF src/util/libutil.a.p/time.cc.o.d -o src/util/libutil.a.p/time.cc.o -c ../src/util/time.cc [20/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/util/libutil.a.p -Isrc/util -I../src/util -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/util/libutil.a.p/file-readers.cc.o -MF src/util/libutil.a.p/file-readers.cc.o.d -o src/util/libutil.a.p/file-readers.cc.o -c ../src/util/file-readers.cc [21/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree_sequencetree.cc.o -MF src/libcommon.a.p/tree_sequencetree.cc.o.d -o src/libcommon.a.p/tree_sequencetree.cc.o -c ../src/tree/sequencetree.cc [22/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree_newick-tokenizer.cc.o -MF src/libcommon.a.p/tree_newick-tokenizer.cc.o.d -o src/libcommon.a.p/tree_newick-tokenizer.cc.o -c ../src/tree/newick-tokenizer.cc [23/297] rm -f src/util/libutil.a && /usr/bin/mips64el-linux-gnuabi64-ar csrD src/util/libutil.a src/util/libutil.a.p/string_pred.cc.o src/util/libutil.a.p/string_sanitize.cc.o src/util/libutil.a.p/string_strip.cc.o src/util/libutil.a.p/string_split.cc.o src/util/libutil.a.p/log-level.cc.o src/util/libutil.a.p/io.cc.o src/util/libutil.a.p/graph.cc.o src/util/libutil.a.p/range.cc.o src/util/libutil.a.p/demangle.cc.o src/util/libutil.a.p/mapping.cc.o src/util/libutil.a.p/cmdline.cc.o src/util/libutil.a.p/rng.cc.o src/util/libutil.a.p/permute.cc.o src/util/libutil.a.p/file-paths.cc.o src/util/libutil.a.p/ptree.cc.o src/util/libutil.a.p/text.cc.o src/util/libutil.a.p/myexception.cc.o src/util/libutil.a.p/time.cc.o src/util/libutil.a.p/file-readers.cc.o [24/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree_tree.cc.o -MF src/libcommon.a.p/tree_tree.cc.o.d -o src/libcommon.a.p/tree_tree.cc.o -c ../src/tree/tree.cc [25/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree_tree-util.cc.o -MF src/libcommon.a.p/tree_tree-util.cc.o.d -o src/libcommon.a.p/tree_tree-util.cc.o -c ../src/tree/tree-util.cc [26/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree_randomtree.cc.o -MF src/libcommon.a.p/tree_randomtree.cc.o.d -o src/libcommon.a.p/tree_randomtree.cc.o -c ../src/tree/randomtree.cc [27/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tree-align_n_indels.cc.o -MF src/libcommon.a.p/tree-align_n_indels.cc.o.d -o src/libcommon.a.p/tree-align_n_indels.cc.o -c ../src/tree-align/n_indels.cc [28/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG 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-Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/sequence_sequence-format.cc.o -MF src/libcommon.a.p/sequence_sequence-format.cc.o.d -o src/libcommon.a.p/sequence_sequence-format.cc.o -c ../src/sequence/sequence-format.cc [31/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/tools_read-trees.cc.o -MF src/libcommon.a.p/tools_read-trees.cc.o.d -o src/libcommon.a.p/tools_read-trees.cc.o -c ../src/tools/read-trees.cc [32/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/alignment_alignment-util.cc.o -MF src/libcommon.a.p/alignment_alignment-util.cc.o.d -o src/libcommon.a.p/alignment_alignment-util.cc.o -c ../src/alignment/alignment-util.cc [33/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libcommon.a.p/alignment_load.cc.o -MF src/libcommon.a.p/alignment_load.cc.o.d -o src/libcommon.a.p/alignment_load.cc.o -c ../src/alignment/load.cc [34/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libcommon.a.p -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat 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-isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/closure.cc.o -MF src/computation/libcomputation.a.p/closure.cc.o.d -o src/computation/libcomputation.a.p/closure.cc.o -c ../src/computation/closure.cc [54/297] rm -f src/libcommon.a && /usr/bin/mips64el-linux-gnuabi64-ar csrD src/libcommon.a src/libcommon.a.p/tree_newick-tokenizer.cc.o src/libcommon.a.p/tree_sequencetree.cc.o src/libcommon.a.p/tree_tree.cc.o src/libcommon.a.p/tree_tree-util.cc.o src/libcommon.a.p/tree_randomtree.cc.o src/libcommon.a.p/tree-align_n_indels.cc.o src/libcommon.a.p/sequence_alphabet.cc.o src/libcommon.a.p/sequence_sequence.cc.o src/libcommon.a.p/sequence_sequence-format.cc.o src/libcommon.a.p/tools_read-trees.cc.o src/libcommon.a.p/alignment_alignment-util.cc.o src/libcommon.a.p/alignment_load.cc.o src/libcommon.a.p/alignment_alignment.cc.o src/libcommon.a.p/alignment_alignment-random.cc.o src/libcommon.a.p/alignment_index-matrix.cc.o src/libcommon.a.p/tree-align_link.cc.o src/libcommon.a.p/models_path.cc.o src/libcommon.a.p/tools_statistics.cc.o src/libcommon.a.p/tools_partition.cc.o src/libcommon.a.p/tools_tree-dist.cc.o src/libcommon.a.p/tools_parsimony.cc.o src/libcommon.a.p/tools_mctree.cc.o src/libcommon.a.p/tools_stats-table.cc.o src/libcommon.a.p/tools_findroot.cc.o src/libcommon.a.p/tools_optimize.cc.o src/libcommon.a.p/tools_distance-report.cc.o src/libcommon.a.p/tools_inverse.cc.o src/libcommon.a.p/tools_joint-A-T.cc.o src/libcommon.a.p/tools_distance-methods.cc.o src/libcommon.a.p/tools_consensus-tree.cc.o [55/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/program.cc.o -MF src/computation/libcomputation.a.p/program.cc.o.d -o src/computation/libcomputation.a.p/program.cc.o -c ../src/computation/program.cc ../src/computation/program.cc: In member function ‘void Program::check_dependencies()’: ../src/computation/program.cc:155:10: warning: unused variable ‘index’ [-Wunused-variable] 155 | int index = find_module(name); | ^~~~~ [56/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/preprocess.cc.o -MF src/computation/libcomputation.a.p/preprocess.cc.o.d -o src/computation/libcomputation.a.p/preprocess.cc.o -c ../src/computation/preprocess.cc [57/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/module.cc.o -MF src/computation/libcomputation.a.p/module.cc.o.d -o 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src/computation/libcomputation.a.p/loader.cc.o.d -o src/computation/libcomputation.a.p/loader.cc.o -c ../src/computation/loader.cc [59/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/context.cc.o -MF src/computation/libcomputation.a.p/context.cc.o.d -o src/computation/libcomputation.a.p/context.cc.o -c ../src/computation/context.cc [60/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/operations.cc.o -MF src/computation/libcomputation.a.p/operations.cc.o.d -o src/computation/libcomputation.a.p/operations.cc.o -c ../src/computation/operations.cc [61/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/param.cc.o -MF src/computation/libcomputation.a.p/param.cc.o.d -o src/computation/libcomputation.a.p/param.cc.o -c ../src/computation/param.cc [62/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/parser_desugar.cc.o -MF src/computation/libcomputation.a.p/parser_desugar.cc.o.d -o src/computation/libcomputation.a.p/parser_desugar.cc.o -c ../src/computation/parser/desugar.cc [63/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. 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-fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/parser_rename.cc.o -MF src/computation/libcomputation.a.p/parser_rename.cc.o.d -o src/computation/libcomputation.a.p/parser_rename.cc.o -c ../src/computation/parser/rename.cc [65/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/mcmc_setup.cc.o -MF src/libbaliphy.a.p/mcmc_setup.cc.o.d -o src/libbaliphy.a.p/mcmc_setup.cc.o -c ../src/mcmc/setup.cc [66/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP 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-fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/optimization_float-out.cc.o -MF src/computation/libcomputation.a.p/optimization_float-out.cc.o.d -o src/computation/libcomputation.a.p/optimization_float-out.cc.o -c ../src/computation/optimization/float-out.cc [105/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/optimization_occurrence.cc.o -MF src/computation/libcomputation.a.p/optimization_occurrence.cc.o.d -o src/computation/libcomputation.a.p/optimization_occurrence.cc.o -c ../src/computation/optimization/occurrence.cc [106/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/optimization_inliner.cc.o -MF src/computation/libcomputation.a.p/optimization_inliner.cc.o.d -o src/computation/libcomputation.a.p/optimization_inliner.cc.o -c ../src/computation/optimization/inliner.cc [107/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/computation/libcomputation.a.p -Isrc/computation -I../src/computation -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -isystem../external/immer -isystemexternal/immer/ -MD -MQ src/computation/libcomputation.a.p/optimization_simplifier.cc.o -MF src/computation/libcomputation.a.p/optimization_simplifier.cc.o.d -o src/computation/libcomputation.a.p/optimization_simplifier.cc.o -c ../src/computation/optimization/simplifier.cc [108/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/dp_dp_hmm.cc.o -MF src/libbaliphy.a.p/dp_dp_hmm.cc.o.d -o src/libbaliphy.a.p/dp_dp_hmm.cc.o -c ../src/dp/dp_hmm.cc [109/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/dp_dp-engine.cc.o -MF src/libbaliphy.a.p/dp_dp-engine.cc.o.d -o src/libbaliphy.a.p/dp_dp-engine.cc.o -c ../src/dp/dp-engine.cc [110/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/dp_dp-array.cc.o -MF src/libbaliphy.a.p/dp_dp-array.cc.o.d -o src/libbaliphy.a.p/dp_dp-array.cc.o -c ../src/dp/dp-array.cc [111/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/dp_hmm.cc.o -MF src/libbaliphy.a.p/dp_hmm.cc.o.d -o src/libbaliphy.a.p/dp_hmm.cc.o -c ../src/dp/hmm.cc [112/297] rm -f src/computation/libcomputation.a && /usr/bin/mips64el-linux-gnuabi64-ar csrD src/computation/libcomputation.a src/computation/libcomputation.a.p/object.cc.o src/computation/libcomputation.a.p/closure.cc.o src/computation/libcomputation.a.p/program.cc.o src/computation/libcomputation.a.p/preprocess.cc.o src/computation/libcomputation.a.p/module.cc.o src/computation/libcomputation.a.p/loader.cc.o src/computation/libcomputation.a.p/context.cc.o src/computation/libcomputation.a.p/operations.cc.o src/computation/libcomputation.a.p/param.cc.o src/computation/libcomputation.a.p/parser_desugar.cc.o src/computation/libcomputation.a.p/parser_desugar-case.cc.o src/computation/libcomputation.a.p/parser_rename.cc.o src/computation/libcomputation.a.p/parser_driver.cc.o src/computation/libcomputation.a.p/parser_lexer.cc.o src/computation/libcomputation.a.p/parser_parser.cc.o src/computation/libcomputation.a.p/expression_operator.cc.o src/computation/libcomputation.a.p/expression_expression.cc.o src/computation/libcomputation.a.p/expression_constructor.cc.o src/computation/libcomputation.a.p/expression_expression_ref.cc.o src/computation/libcomputation.a.p/expression_AST_node.cc.o src/computation/libcomputation.a.p/expression_apply.cc.o src/computation/libcomputation.a.p/expression_substitute.cc.o src/computation/libcomputation.a.p/expression_indexify.cc.o src/computation/libcomputation.a.p/expression_let.cc.o src/computation/libcomputation.a.p/expression_case.cc.o src/computation/libcomputation.a.p/expression_trim.cc.o src/computation/libcomputation.a.p/expression_tuple.cc.o src/computation/libcomputation.a.p/expression_list.cc.o src/computation/libcomputation.a.p/expression_var.cc.o src/computation/libcomputation.a.p/expression_lambda.cc.o src/computation/libcomputation.a.p/expression_random_variable.cc.o src/computation/libcomputation.a.p/expression_modifiable.cc.o src/computation/libcomputation.a.p/expression_reg_var.cc.o src/computation/libcomputation.a.p/expression_bool.cc.o src/computation/libcomputation.a.p/expression_resolved_symbol.cc.o src/computation/libcomputation.a.p/expression_maybe.cc.o src/computation/libcomputation.a.p/expression_do_block.cc.o src/computation/libcomputation.a.p/machine_args.cc.o src/computation/libcomputation.a.p/machine_tokens.cc.o src/computation/libcomputation.a.p/machine_graph_register.cc.o src/computation/libcomputation.a.p/machine_show_graph.cc.o src/computation/libcomputation.a.p/machine_evaluate.cc.o src/computation/libcomputation.a.p/machine_sums.cc.o src/computation/libcomputation.a.p/machine_gc.cc.o src/computation/libcomputation.a.p/machine_reroot.cc.o src/computation/libcomputation.a.p/machine_effects.cc.o src/computation/libcomputation.a.p/expression_kind.cc.o src/computation/libcomputation.a.p/optimization_free-vars.cc.o src/computation/libcomputation.a.p/optimization_set-levels.cc.o src/computation/libcomputation.a.p/optimization_float-out.cc.o src/computation/libcomputation.a.p/optimization_occurrence.cc.o src/computation/libcomputation.a.p/optimization_inliner.cc.o src/computation/libcomputation.a.p/optimization_simplifier.cc.o [113/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG 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-Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/tools_parsimony2.cc.o -MF src/libbaliphy.a.p/tools_parsimony2.cc.o.d -o src/libbaliphy.a.p/tools_parsimony2.cc.o -c ../src/tools/parsimony2.cc [157/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/libbaliphy.a.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/libbaliphy.a.p/version.cc.o -MF src/libbaliphy.a.p/version.cc.o.d -o src/libbaliphy.a.p/version.cc.o -c ../src/version.cc ../src/version.cc:67:8: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 67 | s<<__DATE__<<" "<<__TIME__; | ^~~~~~~~ ../src/version.cc:67:23: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 67 | s<<__DATE__<<" "<<__TIME__; | ^~~~~~~~ [158/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Data.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Data.so.p/Data.cc.o -MF src/builtins/Data.so.p/Data.cc.o.d -o src/builtins/Data.so.p/Data.cc.o -c ../src/builtins/Data.cc [159/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/link-partitions.cc.o -MF src/bali-phy/bali-phy.p/link-partitions.cc.o.d -o src/bali-phy/bali-phy.p/link-partitions.cc.o -c ../src/bali-phy/link-partitions.cc [160/297] rm -f src/libbaliphy.a && /usr/bin/mips64el-linux-gnuabi64-ar csrD src/libbaliphy.a src/libbaliphy.a.p/dp_dp_hmm.cc.o src/libbaliphy.a.p/dp_hmm.cc.o src/libbaliphy.a.p/dp_dp-engine.cc.o src/libbaliphy.a.p/dp_dp-array.cc.o src/libbaliphy.a.p/dp_dp-matrix.cc.o src/libbaliphy.a.p/dp_dp-cube.cc.o src/libbaliphy.a.p/dp_2way.cc.o src/libbaliphy.a.p/dp_3way.cc.o src/libbaliphy.a.p/dp_5way.cc.o src/libbaliphy.a.p/dp_alignment-sums.cc.o src/libbaliphy.a.p/mcmc_mcmc.cc.o src/libbaliphy.a.p/mcmc_proposals.cc.o src/libbaliphy.a.p/mcmc_slice-sampling.cc.o src/libbaliphy.a.p/mcmc_AIS.cc.o src/libbaliphy.a.p/mcmc_logger.cc.o src/libbaliphy.a.p/mcmc_moves.cc.o src/libbaliphy.a.p/mcmc_sample-branch-lengths.cc.o src/libbaliphy.a.p/mcmc_sample-alignment.cc.o src/libbaliphy.a.p/mcmc_sample-topology-SPR.cc.o src/libbaliphy.a.p/mcmc_sample-topology-NNI.cc.o src/libbaliphy.a.p/mcmc_sample-two-nodes.cc.o src/libbaliphy.a.p/mcmc_sample-node.cc.o src/libbaliphy.a.p/mcmc_sample-cube.cc.o src/libbaliphy.a.p/mcmc_sample-tri.cc.o src/libbaliphy.a.p/mcmc_setup.cc.o src/libbaliphy.a.p/substitution_substitution.cc.o src/libbaliphy.a.p/substitution_parsimony.cc.o src/libbaliphy.a.p/math_exponential.cc.o src/libbaliphy.a.p/math_eigenvalue.cc.o src/libbaliphy.a.p/math_pow2.cc.o src/libbaliphy.a.p/models_parameters.cc.o src/libbaliphy.a.p/models_site-compression.cc.o src/libbaliphy.a.p/models_TreeInterface.cc.o src/libbaliphy.a.p/models_setup.cc.o src/libbaliphy.a.p/models_rules.cc.o src/libbaliphy.a.p/models_parse.cc.o src/libbaliphy.a.p/models_typecheck.cc.o src/libbaliphy.a.p/models_unification.cc.o src/libbaliphy.a.p/models_model.cc.o src/libbaliphy.a.p/tree-align_link2.cc.o src/libbaliphy.a.p/probability_choose.cc.o src/libbaliphy.a.p/probability_probability.cc.o src/libbaliphy.a.p/imodel_imodel.cc.o src/libbaliphy.a.p/alignment_alignment-constraint.cc.o src/libbaliphy.a.p/alignment_alignment-util2.cc.o src/libbaliphy.a.p/tree-align_n_indels2.cc.o src/libbaliphy.a.p/tools_parsimony2.cc.o src/libbaliphy.a.p/version.cc.o [161/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/bali-phy.cc.o -MF src/bali-phy/bali-phy.p/bali-phy.cc.o.d -o src/bali-phy/bali-phy.p/bali-phy.cc.o -c ../src/bali-phy/bali-phy.cc ../src/bali-phy/bali-phy.cc: In function ‘void report_mem()’: ../src/bali-phy/bali-phy.cc:122:9: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 122 | system(cmd.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~ [162/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/help.cc.o -MF src/bali-phy/bali-phy.p/help.cc.o.d -o 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/usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/loggers.cc.o -MF src/bali-phy/bali-phy.p/loggers.cc.o.d -o src/bali-phy/bali-phy.p/loggers.cc.o -c ../src/bali-phy/loggers.cc [166/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/system.cc.o -MF src/bali-phy/bali-phy.p/system.cc.o.d -o src/bali-phy/bali-phy.p/system.cc.o -c ../src/bali-phy/system.cc [167/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/cmd_line.cc.o -MF src/bali-phy/bali-phy.p/cmd_line.cc.o.d -o src/bali-phy/bali-phy.p/cmd_line.cc.o -c ../src/bali-phy/cmd_line.cc [168/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/bali-phy/bali-phy.p -Isrc/bali-phy -I../src/bali-phy -I. -I.. -Isrc -I../src -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/bali-phy/bali-phy.p/paths.cc.o -MF src/bali-phy/bali-phy.p/paths.cc.o.d -o src/bali-phy/bali-phy.p/paths.cc.o -c ../src/bali-phy/paths.cc [169/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/bali-phy/bali-phy src/bali-phy/bali-phy.p/link-partitions.cc.o src/bali-phy/bali-phy.p/bali-phy.cc.o src/bali-phy/bali-phy.p/help.cc.o src/bali-phy/bali-phy.p/A-T-model.cc.o src/bali-phy/bali-phy.p/files.cc.o src/bali-phy/bali-phy.p/loggers.cc.o src/bali-phy/bali-phy.p/system.cc.o src/bali-phy/bali-phy.p/cmd_line.cc.o src/bali-phy/bali-phy.p/paths.cc.o -Wl,--as-needed -Wl,--no-undefined -Wl,-O1 -Wl,-export-dynamic -Wl,--whole-archive -Wl,--start-group src/util/libutil.a src/libcommon.a src/computation/libcomputation.a src/libbaliphy.a -Wl,--no-whole-archive -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now -Wl,-rpath,XXXXXXXXXXXXXXXXXXXXXXXX /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -ldl -lm -Wl,--end-group [170/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Array.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Array.so.p/Array.cc.o -MF src/builtins/Array.so.p/Array.cc.o.d -o src/builtins/Array.so.p/Array.cc.o -c ../src/builtins/Array.cc [171/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Array.so src/builtins/Array.so.p/Array.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Array.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [172/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Data.so src/builtins/Data.so.p/Data.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Data.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [173/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Prelude.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Prelude.so.p/Prelude.cc.o -MF src/builtins/Prelude.so.p/Prelude.cc.o.d -o src/builtins/Prelude.so.p/Prelude.cc.o -c ../src/builtins/Prelude.cc [174/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Prelude.so src/builtins/Prelude.so.p/Prelude.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Prelude.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [175/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Alphabet.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Alphabet.so.p/Alphabet.cc.o -MF src/builtins/Alphabet.so.p/Alphabet.cc.o.d -o src/builtins/Alphabet.so.p/Alphabet.cc.o -c ../src/builtins/Alphabet.cc [176/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Alphabet.so src/builtins/Alphabet.so.p/Alphabet.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Alphabet.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [177/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Pair.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Pair.so.p/Pair.cc.o -MF src/builtins/Pair.so.p/Pair.cc.o.d -o src/builtins/Pair.so.p/Pair.cc.o -c ../src/builtins/Pair.cc [178/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Pair.so src/builtins/Pair.so.p/Pair.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Pair.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [179/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Modifiables.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Modifiables.so.p/Modifiables.cc.o -MF src/builtins/Modifiables.so.p/Modifiables.cc.o.d -o src/builtins/Modifiables.so.p/Modifiables.cc.o -c ../src/builtins/Modifiables.cc [180/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Modifiables.so src/builtins/Modifiables.so.p/Modifiables.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Modifiables.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [181/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Alignment.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Alignment.so.p/Alignment.cc.o -MF src/builtins/Alignment.so.p/Alignment.cc.o.d -o src/builtins/Alignment.so.p/Alignment.cc.o -c ../src/builtins/Alignment.cc [182/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Alignment.so src/builtins/Alignment.so.p/Alignment.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Alignment.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [183/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/PopGen.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/PopGen.so.p/PopGen.cc.o -MF src/builtins/PopGen.so.p/PopGen.cc.o.d -o src/builtins/PopGen.so.p/PopGen.cc.o -c ../src/builtins/PopGen.cc [184/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/PopGen.so src/builtins/PopGen.so.p/PopGen.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,PopGen.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [185/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Distribution.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Distribution.so.p/Distribution.cc.o -MF src/builtins/Distribution.so.p/Distribution.cc.o.d -o src/builtins/Distribution.so.p/Distribution.cc.o -c ../src/builtins/Distribution.cc [186/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Distribution.so src/builtins/Distribution.so.p/Distribution.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Distribution.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [187/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Range.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Range.so.p/Range.cc.o -MF src/builtins/Range.so.p/Range.cc.o.d -o src/builtins/Range.so.p/Range.cc.o -c ../src/builtins/Range.cc [188/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Range.so src/builtins/Range.so.p/Range.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Range.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [189/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/SModel.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/SModel.so.p/SModel.cc.o -MF src/builtins/SModel.so.p/SModel.cc.o.d -o src/builtins/SModel.so.p/SModel.cc.o -c ../src/builtins/SModel.cc [190/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/SModel.so src/builtins/SModel.so.p/SModel.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,SModel.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [191/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/MCMC.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/MCMC.so.p/MCMC.cc.o -MF src/builtins/MCMC.so.p/MCMC.cc.o.d -o src/builtins/MCMC.so.p/MCMC.cc.o -c ../src/builtins/MCMC.cc [192/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/MCMC.so src/builtins/MCMC.so.p/MCMC.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,MCMC.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [193/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Vector.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Vector.so.p/Vector.cc.o -MF src/builtins/Vector.so.p/Vector.cc.o.d -o src/builtins/Vector.so.p/Vector.cc.o -c ../src/builtins/Vector.cc [194/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Vector.so src/builtins/Vector.so.p/Vector.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Vector.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [195/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Environment.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Environment.so.p/Environment.cc.o -MF src/builtins/Environment.so.p/Environment.cc.o.d -o src/builtins/Environment.so.p/Environment.cc.o -c ../src/builtins/Environment.cc [196/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Environment.so src/builtins/Environment.so.p/Environment.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Environment.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [197/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/SMC.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/SMC.so.p/SMC.cc.o -MF src/builtins/SMC.so.p/SMC.cc.o.d -o src/builtins/SMC.so.p/SMC.cc.o -c ../src/builtins/SMC.cc [198/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/SMC.so src/builtins/SMC.so.p/SMC.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,SMC.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [199/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Real.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Real.so.p/Real.cc.o -MF src/builtins/Real.so.p/Real.cc.o.d -o src/builtins/Real.so.p/Real.cc.o -c ../src/builtins/Real.cc [200/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Real.so src/builtins/Real.so.p/Real.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Real.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [201/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Bits.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Bits.so.p/Bits.cc.o -MF src/builtins/Bits.so.p/Bits.cc.o.d -o src/builtins/Bits.so.p/Bits.cc.o -c ../src/builtins/Bits.cc [202/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Bits.so src/builtins/Bits.so.p/Bits.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Bits.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [203/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Foreign.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Foreign.so.p/Foreign.cc.o -MF src/builtins/Foreign.so.p/Foreign.cc.o.d -o src/builtins/Foreign.so.p/Foreign.cc.o -c ../src/builtins/Foreign.cc [204/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Foreign.so src/builtins/Foreign.so.p/Foreign.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Foreign.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [205/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Text.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Text.so.p/Text.cc.o -MF src/builtins/Text.so.p/Text.cc.o.d -o src/builtins/Text.so.p/Text.cc.o -c ../src/builtins/Text.cc [206/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Text.so src/builtins/Text.so.p/Text.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Text.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [207/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/builtins/Char.so.p -Isrc/builtins -I../src/builtins -I../src/util/include -I. -I.. -Isrc -I../src -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros -DNDEBUG_DP -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fPIC -isystem/usr/include/eigen3 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1 -DBOOST_RANDOM_DYN_LINK -DBOOST_ALL_NO_LIB -MD -MQ src/builtins/Char.so.p/Char.cc.o -MF src/builtins/Char.so.p/Char.cc.o.d -o src/builtins/Char.so.p/Char.cc.o -c ../src/builtins/Char.cc [208/297] /usr/bin/mips64el-linux-gnuabi64-g++ -o src/builtins/Char.so src/builtins/Char.so.p/Char.cc.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -Wl,-soname,Char.so -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wl,-z,relro -Wl,-z,now /usr/lib/mips64el-linux-gnuabi64/libboost_filesystem.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_program_options.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_chrono.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_random.so.1.74.0 /usr/lib/mips64el-linux-gnuabi64/libboost_system.so.1.74.0 -Wl,--end-group [209/297] /usr/bin/mips64el-linux-gnuabi64-g++ -Isrc/model_P.p -Isrc -I../src -I. -I.. -I../src/util/include -I/usr/include -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -Wextra -Wpedantic -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-show-template-tree -funroll-loops 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/usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-gild.md [274/297] /usr/bin/meson --internal exe --capture doc/alignment-consensus.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-consensus.md [275/297] /usr/bin/meson --internal exe --capture doc/alignment-max.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-max.md [276/297] /usr/bin/meson --internal exe --capture doc/alignment-chop-internal.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-chop-internal.md [277/297] /usr/bin/meson --internal exe --capture doc/alignment-indices.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-indices.md [278/297] /usr/bin/meson --internal exe --capture doc/alignment-info.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-info.md [279/297] /usr/bin/meson --internal exe --capture doc/alignment-cat.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-cat.md [280/297] /usr/bin/meson --internal exe --capture doc/alignment-translate.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-translate.md [281/297] /usr/bin/meson --internal exe --capture doc/alignment-find.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-find.md [282/297] /usr/bin/meson --internal exe --capture doc/trees-consensus.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/trees-consensus.md [283/297] /usr/bin/meson --internal exe --capture doc/tree-mean-lengths.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/tree-mean-lengths.md [284/297] /usr/bin/meson --internal exe --capture doc/mctree-mean-lengths.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/mctree-mean-lengths.md [285/297] /usr/bin/meson --internal exe --capture doc/trees-to-SRQ.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/trees-to-SRQ.md [286/297] /usr/bin/meson --internal exe --capture doc/alignment-thin.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-thin.md [287/297] /usr/bin/meson --internal exe --capture doc/alignments-diff.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignments-diff.md [288/297] /usr/bin/meson --internal exe --capture doc/tree-tool.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/tree-tool.md [289/297] /usr/bin/meson --internal exe --capture doc/alignment-distances.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-distances.md [290/297] /usr/bin/meson --internal exe --capture doc/alignment-draw.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/alignment-draw.md [291/297] /usr/bin/meson --internal exe --capture doc/trees-bootstrap.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/trees-bootstrap.md [292/297] /usr/bin/meson --internal exe --capture doc/draw-tree.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/draw-tree.md [293/297] /usr/bin/meson --internal exe --capture doc/extract-ancestors.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/extract-ancestors.md [294/297] /usr/bin/meson --internal exe --capture doc/summarize-ancestors.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/summarize-ancestors.md [295/297] /usr/bin/meson --internal exe --capture doc/bali-subsample.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/bali-subsample.md [296/297] /usr/bin/meson --internal exe --capture doc/bp-analyze.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/bp-analyze.md [297/297] /usr/bin/meson --internal exe --capture doc/bali-phy-pkg.1 -- /usr/bin/pandoc -s -t man -f markdown-smart ../doc/man/bali-phy-pkg.md dh: command-omitted: The call to "dh_auto_test -a -O--buildsystem=meson" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=meson dh_prep -a -O--buildsystem=meson dh_auto_install --destdir=debian/bali-phy/ -a -O--buildsystem=meson cd obj-mips64el-linux-gnuabi64 && DESTDIR=/<>/bali-phy-3.6.1\+dfsg/debian/bali-phy LC_ALL=C.UTF-8 ninja install [1/5] Generating git-version.h with a custom command [1/2] Installing files. Installing subdir /<>/haskell to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Tree.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/SModel.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/SMC.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Range.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Probability.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Prelude.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/PopGen.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Parse.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Parameters.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/MCMC.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/IModel.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell Installing /<>/haskell/Tree/Newick.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Tree Installing /<>/haskell/System/Environment.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/System Installing /<>/haskell/SModel/ReversibleMarkov.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/SModel/Nucleotides.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/SModel/Likelihood.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/SModel/Frequency.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/SModel/Doublets.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/SModel/Codons.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/SModel Installing /<>/haskell/Probability/Random.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability Installing /<>/haskell/Probability/Distribution/Uniform.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Tree.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/RandomAlignment.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Poisson.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Normal.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Mixture.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/List.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Laplace.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Geometric.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Gamma.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/FakeDist.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Exponential.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/ExpTransform.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Discrete.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/DirichletProcess.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Dirichlet.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Cauchy.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Categorical.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Binomial.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Beta.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Probability/Distribution/Bernoulli.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Probability/Distribution Installing /<>/haskell/Foreign/Vector.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Foreign Installing /<>/haskell/Foreign/String.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Foreign Installing /<>/haskell/Foreign/Pair.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Foreign Installing /<>/haskell/Foreign/Introspection.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Foreign Installing /<>/haskell/Data/Tuple.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Text.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Set.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/ReadFile.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Ord.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Maybe.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Matrix.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Map.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/List.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/JSON.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Ix.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Function.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Eq.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Either.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Char.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Bool.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/BitVector.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Data/Array.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Data Installing /<>/haskell/Control/Monad.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Control Installing /<>/haskell/Control/DeepSeq.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Control Installing /<>/haskell/Compiler/ST.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Compiler/Real.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Compiler/Num.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Compiler/IO.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Compiler/Enum.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Compiler/Base.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Compiler Installing /<>/haskell/Bio/Sequence.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Bio Installing /<>/haskell/Bio/Alphabet.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Bio Installing /<>/haskell/Bio/Alignment.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Bio Installing /<>/haskell/Bio/Alignment/Pairwise.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Bio/Alignment Installing /<>/haskell/Bio/Alignment/Matrix.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/Bio/Alignment Installing /<>/haskell/BAliPhy/ATModel.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/BAliPhy Installing /<>/haskell/BAliPhy/ATModel/DataPartition.hs to /<>/debian/bali-phy/usr/lib/bali-phy/haskell/BAliPhy/ATModel Installing subdir /<>/bindings to /<>/debian/bali-phy/usr/lib/bali-phy/bindings Installing /<>/bindings/models/x3x3.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/x3_sym.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/x3.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/x2x2.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/x2_sym.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/x2.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/wag_freq.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/wag.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/tn93_sym.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/tn93.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/scaled_mixture.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/sample.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/rs07_relaxed_rates.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/rs07.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/rs05.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/rna_16a.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/parameter_mixture.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/pam.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mut_sel_aa.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mut_sel.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/multi_rate.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/multiMixtureModel.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mixture.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mg94k.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mg94_ext.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/mg94.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/markov_modulate_mixture.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m8a_test.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m8a.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m8.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m7.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m3_test.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m3.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m2a_test.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m2a.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/m1a.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/lg08_freq.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/lg08.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/k80.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/jtt.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/jc69.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/inv.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/hky85_sym.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/hky85.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/gy94_ext.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/gy94.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/gwF.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/gtr_sym.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/gtr.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/get_q.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/fe.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/fMutSel0.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/fMutSel.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/f81.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/f61.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/f3x4.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/f1x4.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/f.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/equ.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/empirical.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/density.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/dNdS.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/branch_site.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models Installing /<>/bindings/models/Rates/log_normal.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Rates Installing /<>/bindings/models/Rates/gamma.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Rates Installing /<>/bindings/models/Rates/free.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Rates Installing /<>/bindings/models/Frequencies/uniform.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Frequencies Installing /<>/bindings/models/Covarion/wang07.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Covarion Installing /<>/bindings/models/Covarion/ts98.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Covarion Installing /<>/bindings/models/Covarion/huelsenbeck02.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Covarion Installing /<>/bindings/models/Covarion/galtier01.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/models/Covarion Installing /<>/bindings/functions/zipWith.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/zip.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/unit_mixture.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/uniform_discretize.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/tan.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/take.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/sub.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/standard_code.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/sqrt.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/sin.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/rna.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/replicate.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/quantile.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/num_branches.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/mul.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/map.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/log.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/letters.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/letter_pairs.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/length.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/intToDouble.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/getNucleotides.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/getAminoAcids.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/exp.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/dna.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/div.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/cos.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/codons.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/add.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/aa.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions Installing /<>/bindings/functions/constructors/Nil.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions/constructors Installing /<>/bindings/functions/constructors/Cons.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/functions/constructors Installing /<>/bindings/distributions/uniform_int.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/uniform.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/symmetric_dirichlet_on.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/symmetric_dirichlet.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/shifted_gamma.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/shifted_exponential.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/poisson.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/normal.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/log_normal.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/log_laplace.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/log_gamma.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/laplace.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/iid.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/geometric.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/gamma.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/exponential.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/cauchy.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/binomial.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/beta.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing /<>/bindings/distributions/bernoulli.json to /<>/debian/bali-phy/usr/lib/bali-phy/bindings/distributions Installing subdir /<>/help to /<>/debian/bali-phy/usr/lib/bali-phy/help Installing /<>/help/parameters.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help Installing /<>/help/alphabets.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help Installing /<>/help/parameters/priors.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/parameters Installing /<>/help/commands/version.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/verbose.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/unalign.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/tree.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/test.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/subsample.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/smodel.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/set.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/seed.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/scale.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/print.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/pre-burnin.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/package-path.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/name.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/model.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/link.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/iterations.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/imodel.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/enable.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/disable.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/config.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/branch-lengths.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/alphabet.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/align.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/commands/Rao-Blackwellize.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/commands Installing /<>/help/alphabets/genetic-code.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/alphabets Installing /<>/help/alphabets/Triplets.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/alphabets Installing /<>/help/alphabets/Doublets.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/alphabets Installing /<>/help/alphabets/Codons.txt to /<>/debian/bali-phy/usr/lib/bali-phy/help/alphabets Installing subdir /<>/examples to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples Installing /<>/examples/sequences/microbotryum/table1.accessions to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/paper.txt to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/other.accessions to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/additional.accessions to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76-muscle.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76-clustalw.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/76-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37-muscle.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37-clustalw.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/37-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30.aln to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30-muscle.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30-clustalw.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/microbotryum/30-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/microbotryum Installing /<>/examples/sequences/lrRNA/mollusc12.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/lrRNA/mollusc.rna.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/lrRNA/mollusc.gb to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/lrRNA/mollusc.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/lrRNA/keep.pl to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/lrRNA/NOTES.txt to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/lrRNA Installing /<>/examples/sequences/ferns/orig.nex to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/ferns/orig.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/ferns/config2.txt to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/ferns/config.txt to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/ferns/cleaned.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/ferns/README.txt to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ferns Installing /<>/examples/sequences/Miklos-2008/xylose_isomerase.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/subtilase.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/rr_receiver.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/parvalbumin-like.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/papain.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/lysozyme.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/legume_lectin.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/lectin.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/haloperoxidase.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/annexin.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/Starch_binding_domain.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/Miklos-2008/Src_homology_2_domains.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Miklos-2008 Installing /<>/examples/sequences/ITS/ITS2-trimmed.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ITS Installing /<>/examples/sequences/ITS/ITS1-trimmed.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ITS Installing /<>/examples/sequences/ITS/5.8S.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/ITS Installing /<>/examples/sequences/HIV/HIVSIV.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV Installing /<>/examples/sequences/HIV/chain-2005/pol.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/pol-common.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/pol-clustal.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/env.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/env-common.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/env-clustal.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/HIV/chain-2005/env-clustal-codons.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/HIV/chain-2005 Installing /<>/examples/sequences/Globins/some.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/many.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/many-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/globins.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/few.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/few-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/few-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/few-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/bglobin.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/10-globins.xml to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Globins/10-globins-Lunter.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Globins Installing /<>/examples/sequences/Feng-Doolittle-1987/v-src.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/v-src-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/v-src-mafft.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/v-src-fsa.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-prank.2.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-prank.2.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-prank.1.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-prank.1.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-mafft.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-fsa.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-bali-phy-C20-gamma4.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-bali-phy-C20-gamma4.MAP.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/sod-bali-phy-C20-gamma4-c50.PP.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-prank.2.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-prank.2.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-prank.1.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-prank.1.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-mafft.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-fsa.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-bali-phy-C20-gamma4.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-bali-phy-C20-gamma4.MAP.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Feng-Doolittle-1987/globins-bali-phy-C20-gamma4-c50.PP.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Feng-Doolittle-1987 Installing /<>/examples/sequences/Enolase/enolase-38.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Enolase Installing /<>/examples/sequences/Enolase/enolase-38-trimmed.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Enolase Installing /<>/examples/sequences/EF-Tu/5d.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/5d-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/5d-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/5d-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/48b.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/48b-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/48b-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/25-mafft.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/12d.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/12d-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/12d-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/EF-Tu/12d-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/EF-Tu Installing /<>/examples/sequences/Duplications/trp-tyr/tyr.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/trp-tyr Installing /<>/examples/sequences/Duplications/trp-tyr/tyr-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/trp-tyr Installing /<>/examples/sequences/Duplications/trp-tyr/trp.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/trp-tyr Installing /<>/examples/sequences/Duplications/trp-tyr/trp-tyr-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/trp-tyr Installing /<>/examples/sequences/Duplications/trp-tyr/trp-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/trp-tyr Installing /<>/examples/sequences/Duplications/hisA-hisF/hisF.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/Duplications/hisA-hisF/hisF-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/Duplications/hisA-hisF/hisA.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/Duplications/hisA-hisF/hisA-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/Duplications/hisA-hisF/hisA-hisF-muscle.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/Duplications/hisA-hisF/hisA-hisF-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/Duplications/hisA-hisF Installing /<>/examples/sequences/5S-rRNA/5d.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/5d-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/5d-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/5d-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-t-coffee.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-t-coffee.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-probcons-RNA.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-probcons-RNA-trained.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-fsa.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-fsa.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-dialign2-2.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-GTR-DP6-consensus.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-GTR-DP6-c10.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-GTR-DP6-WPD.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-GTR-DP6-MAP.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/48-GTR-DP6-MAP.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-tcoffee.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-tcoffee.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-t-coffee.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-t-coffee.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-probcons-RNA.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-probcons-RNA-trained.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-poy.trees to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-poy.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-poy.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-poy.command to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-muscle.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-fsa.ph to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-fsa.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-dialign2-2.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-clustalw.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-clustalw.dnd to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-GTR-LN8-c50.tree to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-GTR-LN8-c50.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/sequences/5S-rRNA/25-GTR-LN8-WPD.fasta to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/sequences/5S-rRNA Installing /<>/examples/models/Airline.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Coalmine.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo1.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo2.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo3.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo4.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo5.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing /<>/examples/models/Demo6.hs to /<>/debian/bali-phy/usr/share/doc/bali-phy/examples/models Warning: trying to copy a symlink that points to a file. This will copy the file, but this will be changed in a future version of Meson to copy the symlink as is. Please update your build definitions so that it will not break when the change happens. Installing src/bali-phy/bali-phy to /<>/debian/bali-phy/usr/bin Installing src/builtins/Array.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Data.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Prelude.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Alphabet.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Pair.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Modifiables.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Alignment.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/PopGen.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Distribution.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Range.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/SModel.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/MCMC.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Vector.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Environment.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/SMC.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Real.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Bits.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Foreign.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Text.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/builtins/Char.so to /<>/debian/bali-phy/usr/lib/bali-phy Installing src/model_P to /<>/debian/bali-phy/usr/bin Installing src/statreport to /<>/debian/bali-phy/usr/bin Installing src/stats-select to /<>/debian/bali-phy/usr/bin Installing src/alignment-gild to /<>/debian/bali-phy/usr/bin Installing src/alignment-consensus to /<>/debian/bali-phy/usr/bin Installing src/alignment-max to /<>/debian/bali-phy/usr/bin Installing src/alignment-chop-internal to /<>/debian/bali-phy/usr/bin Installing src/alignment-indices to /<>/debian/bali-phy/usr/bin Installing src/alignment-info to /<>/debian/bali-phy/usr/bin Installing src/alignment-cat to /<>/debian/bali-phy/usr/bin Installing src/alignment-translate to /<>/debian/bali-phy/usr/bin Installing src/alignment-find to /<>/debian/bali-phy/usr/bin Installing src/trees-consensus to /<>/debian/bali-phy/usr/bin Installing src/tree-mean-lengths to /<>/debian/bali-phy/usr/bin Installing src/mctree-mean-lengths to /<>/debian/bali-phy/usr/bin Installing src/trees-to-SRQ to /<>/debian/bali-phy/usr/bin Installing src/pickout to /<>/debian/bali-phy/usr/bin Installing src/cut-range to /<>/debian/bali-phy/usr/bin Installing src/trees-distances to /<>/debian/bali-phy/usr/bin Installing src/alignment-thin to /<>/debian/bali-phy/usr/bin Installing src/alignments-diff to /<>/debian/bali-phy/usr/bin Installing src/tree-tool to /<>/debian/bali-phy/usr/bin Installing src/alignment-distances to /<>/debian/bali-phy/usr/bin Installing src/alignment-draw to /<>/debian/bali-phy/usr/bin Installing src/trees-bootstrap to /<>/debian/bali-phy/usr/bin Installing src/draw-tree to /<>/debian/bali-phy/usr/bin Installing src/extract-ancestors to /<>/debian/bali-phy/usr/bin Installing src/summarize-ancestors to /<>/debian/bali-phy/usr/bin Installing src/bali-subsample to /<>/debian/bali-phy/usr/bin Installing doc/bali-phy.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/model_P.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/statreport.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/stats-select.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-gild.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-consensus.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-max.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-chop-internal.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-indices.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-info.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-cat.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-translate.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-find.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/trees-consensus.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/tree-mean-lengths.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/mctree-mean-lengths.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/trees-to-SRQ.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/pickout.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/cut-range.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/trees-distances.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-thin.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignments-diff.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/tree-tool.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-distances.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/alignment-draw.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/trees-bootstrap.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/draw-tree.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/extract-ancestors.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/summarize-ancestors.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/bali-subsample.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/bp-analyze.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing doc/bali-phy-pkg.1 to /<>/debian/bali-phy/usr/share/man/man1 Installing /<>/scripts/bp-analyze to /<>/debian/bali-phy/usr/bin Installing /<>/scripts/bali-phy-pkg to /<>/debian/bali-phy/usr/bin Installing /<>/scripts/compare-runs.R to /<>/debian/bali-phy/usr/lib/bali-phy/libexec Installing /<>/scripts/compare-runs2.R to /<>/debian/bali-phy/usr/lib/bali-phy/libexec Installing /<>/scripts/tree-plot.R to /<>/debian/bali-phy/usr/lib/bali-phy/libexec Installing /<>/scripts/tree-plot-3D.R to /<>/debian/bali-phy/usr/lib/bali-phy/libexec dh_installdocs -a -O--buildsystem=meson dh_installchangelogs -a -O--buildsystem=meson dh_installman -a -O--buildsystem=meson dh_installsystemduser -a -O--buildsystem=meson dh_lintian -a -O--buildsystem=meson dh_perl -a -O--buildsystem=meson dh_link -a -O--buildsystem=meson dh_strip_nondeterminism -a -O--buildsystem=meson dh_compress -a -O--buildsystem=meson dh_fixperms -a -O--buildsystem=meson dh_missing -a -O--buildsystem=meson dh_dwz -a -a -O--buildsystem=meson dh_strip -a -a -O--buildsystem=meson dh_makeshlibs -a -a -O--buildsystem=meson dh_shlibdeps -a -a -O--buildsystem=meson dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Environment.so contains an unresolvable reference to symbol _ZNK14expression_ref5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Bits.so contains an unresolvable reference to symbol _ZTI6Object: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Real.so contains an unresolvable reference to symbol _ZNK14expression_ref5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Array.so contains an unresolvable reference to symbol _ZN13OperationArgs8evaluateEi: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Alphabet.so contains an unresolvable reference to symbol _ZN6CodonsC1ERK11NucleotidesRK10AminoAcidsRK12Genetic_Code: it's probably a plugin dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Foreign.so contains an unresolvable reference to symbol _Z12is_bool_trueRK14expression_ref: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/MCMC.so contains an unresolvable reference to symbol _ZN13OperationArgs8evaluateEi: it's probably a plugin dpkg-shlibdeps: warning: 43 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Distribution.so contains an unresolvable reference to symbol _Z8gaussiandd: it's probably a plugin dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Data.so contains an unresolvable reference to symbol _ZTI6Object: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/PopGen.so contains an unresolvable reference to symbol _Z8demangleRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Range.so contains an unresolvable reference to symbol _ZNK6Object5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/SModel.so contains an unresolvable reference to symbol _Z3expRK11EigenValuesRKSt6vectorIdSaIdEEd: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Modifiables.so contains an unresolvable reference to symbol _ZTV10expression: it's probably a plugin dpkg-shlibdeps: warning: 26 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Pair.so contains an unresolvable reference to symbol _ZNK14expression_ref5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Char.so contains an unresolvable reference to symbol _ZNK14expression_ref5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Vector.so contains an unresolvable reference to symbol _ZN11constructorC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEi: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Text.so contains an unresolvable reference to symbol _ZTI6Object: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Alignment.so contains an unresolvable reference to symbol _ZNK6Object5printB5cxx11Ev: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/Prelude.so contains an unresolvable reference to symbol _ZNK8Operator16print_expressionERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS6_EE: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/bali-phy/usr/lib/bali-phy/SMC.so contains an unresolvable reference to symbol _Z14select_columnsRK9alignmentRKSt6vectorIiSaIiEE: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=meson dh_gencontrol -a -O--buildsystem=meson dh_md5sums -a -O--buildsystem=meson dh_builddeb -a -O--buildsystem=meson dpkg-deb: building package 'bali-phy' in '../bali-phy_3.6.1+dfsg-1_mips64el.deb'. dpkg-deb: building package 'bali-phy-dbgsym' in '../bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../bali-phy_3.6.1+dfsg-1_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-09-14T12:41:58Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bali-phy_3.6.1+dfsg-1_mips64el.changes: --------------------------------------- Format: 1.8 Date: Mon, 30 Aug 2021 17:50:26 +0200 Source: bali-phy Binary: bali-phy bali-phy-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 3.6.1+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: bali-phy - Bayesian Inference of Alignment and Phylogeny Changes: bali-phy (3.6.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) Checksums-Sha1: ec373e89b5a4afcecd1043a12b46ab9f50d09bc0 147051124 bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb 1180137047d18476757a249682236aaf03787fda 8438 bali-phy_3.6.1+dfsg-1_mips64el.buildinfo 16cbcff8e45cbcb62c0ee7e23d95692163ec3f79 5742172 bali-phy_3.6.1+dfsg-1_mips64el.deb Checksums-Sha256: d0f1a8b2ae3f7e96b2dec69938242ead8b6d78bd064b5f6d8d8c591d9a245b33 147051124 bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb bcd883e2412c32c82deceef4183a111c20fc1af368241eb25e532b49605010f0 8438 bali-phy_3.6.1+dfsg-1_mips64el.buildinfo 5a404a25a65d23014bfbfe3ad4b211129518336fd30c490d077a26457c3c466b 5742172 bali-phy_3.6.1+dfsg-1_mips64el.deb Files: 1263749050c72b0507ed6facf6145f1f 147051124 debug optional bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb d1e484aa02b862f71059678097a7dc86 8438 science optional bali-phy_3.6.1+dfsg-1_mips64el.buildinfo 5f3235b84ec275285072e2ef80bd6c8a 5742172 science optional bali-phy_3.6.1+dfsg-1_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: bali-phy Binary: bali-phy bali-phy-dbgsym Architecture: mips64el Version: 3.6.1+dfsg-1 Checksums-Md5: 1263749050c72b0507ed6facf6145f1f 147051124 bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb 5f3235b84ec275285072e2ef80bd6c8a 5742172 bali-phy_3.6.1+dfsg-1_mips64el.deb Checksums-Sha1: ec373e89b5a4afcecd1043a12b46ab9f50d09bc0 147051124 bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb 16cbcff8e45cbcb62c0ee7e23d95692163ec3f79 5742172 bali-phy_3.6.1+dfsg-1_mips64el.deb Checksums-Sha256: d0f1a8b2ae3f7e96b2dec69938242ead8b6d78bd064b5f6d8d8c591d9a245b33 147051124 bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb 5a404a25a65d23014bfbfe3ad4b211129518336fd30c490d077a26457c3c466b 5742172 bali-phy_3.6.1+dfsg-1_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 14 Sep 2021 12:41:56 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.4-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 12), base-passwd (= 3.5.51), bash (= 5.1-3+b1), binutils (= 2.37-5), binutils-common (= 2.37-5), binutils-x86-64-linux-gnu (= 2.37-5), bsdextrautils (= 2.37.2-2), bsdutils (= 1:2.37.2-2), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.3.0-10), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.77), debhelper (= 13.5.1), debianutils (= 5.4-4), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), fontconfig-config (= 2.13.1-4.2), fonts-dejavu-core (= 2.37-2), g++ (= 4:10.2.1-1), g++-10 (= 10.3.0-10), gcc (= 4:10.2.1-1), gcc-10 (= 10.3.0-10), gcc-10-base (= 10.3.0-10), gcc-11-base (= 11.2.0-5), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-5), libatomic1 (= 11.2.0-5), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.5-1), libaudit1 (= 1:3.0.5-1), libbinutils (= 2.37-5), libblkid-dev (= 2.37.2-2), libblkid1 (= 2.37.2-2), libboost-chrono-dev (= 1.74.0.3), libboost-chrono1.74-dev (= 1.74.0-9), libboost-chrono1.74.0 (= 1.74.0-9), libboost-dev (= 1.74.0.3), libboost-filesystem-dev (= 1.74.0.3), libboost-filesystem1.74-dev (= 1.74.0-9), libboost-filesystem1.74.0 (= 1.74.0-9), libboost-program-options-dev (= 1.74.0.3), libboost-program-options1.74-dev (= 1.74.0-9), libboost-program-options1.74.0 (= 1.74.0-9), libboost-random-dev (= 1.74.0.3), libboost-random1.74-dev (= 1.74.0-9), libboost-random1.74.0 (= 1.74.0-9), libboost-system-dev (= 1.74.0.3), libboost-system1.74-dev (= 1.74.0-9), libboost-system1.74.0 (= 1.74.0-9), libboost1.74-dev (= 1.74.0-9), libbrotli-dev (= 1.0.9-2+b2), libbrotli1 (= 1.0.9-2+b2), libbsd0 (= 0.11.3-1), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.32-2), libc-dev-bin (= 2.32-2), libc6 (= 2.32-2), libc6-dev (= 2.32-2), libcairo-gobject2 (= 1.16.0-5), libcairo-script-interpreter2 (= 1.16.0-5), libcairo2 (= 1.16.0-5), libcairo2-dev (= 1.16.0-5), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 11.2.0-5), libcmark-gfm-extensions0 (= 0.29.0.gfm.0-6), libcmark-gfm0 (= 0.29.0.gfm.0-6), libcom-err2 (= 1.46.4-1), libcrypt-dev (= 1:4.4.25-2), libcrypt1 (= 1:4.4.25-2), libctf-nobfd0 (= 2.37-5), libctf0 (= 2.37-5), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.260), libdebhelper-perl (= 13.5.1), libdpkg-perl (= 1.20.9), libeigen3-dev (= 3.3.9-2), libelf1 (= 0.185-2), libexpat1 (= 2.4.1-2), libexpat1-dev (= 2.4.1-2), libffi-dev (= 3.3-6), libffi7 (= 3.3-6), libfile-stripnondeterminism-perl (= 1.12.0-1), libfontconfig-dev (= 2.13.1-4.2), libfontconfig1 (= 2.13.1-4.2), libfontconfig1-dev (= 2.13.1-4.2), libfreetype-dev (= 2.10.4+dfsg-1), libfreetype6 (= 2.10.4+dfsg-1), libfreetype6-dev (= 2.10.4+dfsg-1), libgcc-10-dev (= 10.3.0-10), libgcc-s1 (= 11.2.0-5), libgcrypt20 (= 1.9.4-3), libgdbm-compat4 (= 1.21-1), libgdbm6 (= 1.21-1), libglib2.0-0 (= 2.68.4-1), libglib2.0-bin (= 2.68.4-1), libglib2.0-data (= 2.68.4-1), libglib2.0-dev (= 2.68.4-1), libglib2.0-dev-bin (= 2.68.4-1), libgmp10 (= 2:6.2.1+dfsg-2), libgomp1 (= 11.2.0-5), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libice-dev (= 2:1.0.10-1), libice6 (= 2:1.0.10-1), libicu67 (= 67.1-7), libisl23 (= 0.23-1), libitm1 (= 11.2.0-5), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblsan0 (= 11.2.0-5), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), liblzo2-2 (= 2.10-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmd0 (= 1.0.3-3), libmount-dev (= 2.37.2-2), libmount1 (= 2.37.2-2), libmpc3 (= 1.2.0-1), libmpdec3 (= 2.5.1-2), libmpfr6 (= 4.1.0-3), libncursesw6 (= 6.2+20210905-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-10), libpam-modules-bin (= 1.4.0-10), libpam-runtime (= 1.4.0-10), libpam0g (= 1.4.0-10), libpcre16-3 (= 2:8.39-13), libpcre2-16-0 (= 10.36-2), libpcre2-32-0 (= 10.36-2), libpcre2-8-0 (= 10.36-2), libpcre2-dev (= 10.36-2), libpcre2-posix2 (= 10.36-2), libpcre3 (= 2:8.39-13), libpcre3-dev (= 2:8.39-13), libpcre32-3 (= 2:8.39-13), libpcrecpp0v5 (= 2:8.39-13), libperl5.32 (= 5.32.1-5), libpipeline1 (= 1.5.3-1), libpixman-1-0 (= 0.40.0-1), libpixman-1-dev (= 0.40.0-1), libpng-dev (= 1.6.37-3), libpng16-16 (= 1.6.37-3), libpthread-stubs0-dev (= 0.4-1), libpython3-stdlib (= 3.9.2-3), libpython3.9-minimal (= 3.9.7-2), libpython3.9-stdlib (= 3.9.7-2), libquadmath0 (= 11.2.0-5), librange-v3-dev (= 0.11.0-1), libreadline8 (= 8.1-2), libseccomp2 (= 2.5.2-1), libselinux1 (= 3.1-3), libselinux1-dev (= 3.1-3), libsepol1 (= 3.1-1), libsepol1-dev (= 3.1-1), libsigsegv2 (= 2.13-1), libsm-dev (= 2:1.2.3-1), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.37.2-2), libsqlite3-0 (= 3.36.0-2), libssl1.1 (= 1.1.1l-1), libstdc++-10-dev (= 10.3.0-10), libstdc++6 (= 11.2.0-5), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.9-1), libtinfo6 (= 6.2+20210905-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-5), libubsan1 (= 11.2.0-5), libuchardet0 (= 0.0.7-1), libudev1 (= 247.9-1), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-2), libx11-6 (= 2:1.7.2-1), libx11-data (= 2:1.7.2-1), libx11-dev (= 2:1.7.2-1), libxau-dev (= 1:1.0.9-1), libxau6 (= 1:1.0.9-1), libxcb-render0 (= 1.14-3), libxcb-render0-dev (= 1.14-3), libxcb-shm0 (= 1.14-3), libxcb-shm0-dev (= 1.14-3), libxcb1 (= 1.14-3), libxcb1-dev (= 1.14-3), libxdmcp-dev (= 1:1.1.2-3), libxdmcp6 (= 1:1.1.2-3), libxext-dev (= 2:1.3.3-1.1), libxext6 (= 2:1.3.3-1.1), libxml2 (= 2.9.12+dfsg-4), libxrender-dev (= 1:0.9.10-1), libxrender1 (= 1:0.9.10-1), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.10.46-4), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), media-types (= 4.0.0), meson (= 0.59.1-1), ncurses-base (= 6.2+20210905-1), ncurses-bin (= 6.2+20210905-1), ninja-build (= 1.10.1-1), nlohmann-json3-dev (= 3.10.2-1), pandoc (= 2.9.2.1-1+b1), pandoc-data (= 2.9.2.1-1), patch (= 2.7.6-7), perl (= 5.32.1-5), perl-base (= 5.32.1-5), perl-modules-5.32 (= 5.32.1-5), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21+nmu1), python3 (= 3.9.2-3), python3-distutils (= 3.9.7-1), python3-lib2to3 (= 3.9.7-1), python3-minimal (= 3.9.2-3), python3-pkg-resources (= 52.0.0-4), python3.9 (= 3.9.7-2), python3.9-minimal (= 3.9.7-2), readline-common (= 8.1-2), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 2.96-7), tar (= 1.34+dfsg-1), tzdata (= 2021a-1), ucf (= 3.0043), util-linux (= 2.37.2-2), uuid-dev (= 2.37.2-2), x11-common (= 1:7.7+23), x11proto-dev (= 2020.1-1), x11proto-xext-dev (= 2020.1-1), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.4.0-1), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1630338626" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ bali-phy-dbgsym_3.6.1+dfsg-1_mips64el.deb ----------------------------------------- new Debian package, version 2.0. size 147051124 bytes: control archive=2868 bytes. 2399 bytes, 12 lines control 5392 bytes, 51 lines md5sums Package: bali-phy-dbgsym Source: bali-phy Version: 3.6.1+dfsg-1 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 153175 Depends: bali-phy (= 3.6.1+dfsg-1) Section: debug Priority: optional Description: debug symbols for bali-phy Build-Ids: 01fc85ff23bef39773b082c95723824b1b8c46d7 0cb1d14f4e86167f97d8e5fdf288336db12db500 11a8ae71f31ac7f1a9a31f51551b6c8c8eb27a0e 14d416140c10661b23fec6961d59493d7f0950ba 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2.0. size 5742172 bytes: control archive=13176 bytes. 1168 bytes, 21 lines control 42418 bytes, 495 lines md5sums Package: bali-phy Version: 3.6.1+dfsg-1 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 42385 Depends: libboost-chrono1.74.0 (>= 1.74.0), libboost-filesystem1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libboost-random1.74.0 (>= 1.74.0), libc6 (>= 2.29), libcairo2 (>= 1.4.10), libgcc-s1 (>= 4.5), libstdc++6 (>= 9), perl:any, python3 Recommends: r-base, gnuplot Suggests: figtree, seaview Section: science Priority: optional Homepage: http://www.bali-phy.org Description: Bayesian Inference of Alignment and Phylogeny BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot. . BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. 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764 2021-08-30 15:50 ./usr/share/man/man1/alignment-draw.1.gz -rw-r--r-- root/root 480 2021-08-30 15:50 ./usr/share/man/man1/alignment-find.1.gz -rw-r--r-- root/root 654 2021-08-30 15:50 ./usr/share/man/man1/alignment-gild.1.gz -rw-r--r-- root/root 668 2021-08-30 15:50 ./usr/share/man/man1/alignment-indices.1.gz -rw-r--r-- root/root 511 2021-08-30 15:50 ./usr/share/man/man1/alignment-info.1.gz -rw-r--r-- root/root 651 2021-08-30 15:50 ./usr/share/man/man1/alignment-max.1.gz -rw-r--r-- root/root 1218 2021-08-30 15:50 ./usr/share/man/man1/alignment-thin.1.gz -rw-r--r-- root/root 672 2021-08-30 15:50 ./usr/share/man/man1/alignment-translate.1.gz -rw-r--r-- root/root 634 2021-08-30 15:50 ./usr/share/man/man1/alignments-diff.1.gz -rw-r--r-- root/root 639 2021-08-30 15:50 ./usr/share/man/man1/bali-phy-pkg.1.gz -rw-r--r-- root/root 1580 2021-08-30 15:50 ./usr/share/man/man1/bali-phy.1.gz -rw-r--r-- root/root 486 2021-08-30 15:50 ./usr/share/man/man1/bali-subsample.1.gz -rw-r--r-- root/root 517 2021-08-30 15:50 ./usr/share/man/man1/bp-analyze.1.gz -rw-r--r-- root/root 518 2021-08-30 15:50 ./usr/share/man/man1/cut-range.1.gz -rw-r--r-- root/root 970 2021-08-30 15:50 ./usr/share/man/man1/draw-tree.1.gz -rw-r--r-- root/root 724 2021-08-30 15:50 ./usr/share/man/man1/extract-ancestors.1.gz -rw-r--r-- root/root 679 2021-08-30 15:50 ./usr/share/man/man1/mctree-mean-lengths.1.gz -rw-r--r-- root/root 434 2021-08-30 15:50 ./usr/share/man/man1/model_P.1.gz -rw-r--r-- root/root 467 2021-08-30 15:50 ./usr/share/man/man1/pickout.1.gz -rw-r--r-- root/root 839 2021-08-30 15:50 ./usr/share/man/man1/statreport.1.gz -rw-r--r-- root/root 487 2021-08-30 15:50 ./usr/share/man/man1/stats-select.1.gz -rw-r--r-- root/root 739 2021-08-30 15:50 ./usr/share/man/man1/summarize-ancestors.1.gz -rw-r--r-- root/root 707 2021-08-30 15:50 ./usr/share/man/man1/tree-mean-lengths.1.gz -rw-r--r-- root/root 615 2021-08-30 15:50 ./usr/share/man/man1/tree-tool.1.gz -rw-r--r-- root/root 856 2021-08-30 15:50 ./usr/share/man/man1/trees-bootstrap.1.gz -rw-r--r-- root/root 1118 2021-08-30 15:50 ./usr/share/man/man1/trees-consensus.1.gz -rw-r--r-- root/root 886 2021-08-30 15:50 ./usr/share/man/man1/trees-distances.1.gz -rw-r--r-- root/root 619 2021-08-30 15:50 ./usr/share/man/man1/trees-to-SRQ.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [616 B] Get:5 copy:/<>/apt_archive ./ Packages [705 B] Fetched 2284 B in 0s (87.9 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 6770 kB of archives. After this operation, 20.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [856 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1.1 [18.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.26-1 [16.5 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.26-1 [129 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1.1 [6956 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-2 [60.4 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.118-1 [53.5 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.008-1+b1 [12.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.611-1 [45.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012004-1 [351 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-3 [88.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.106.0 [1331 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6770 kB in 0s (28.3 MB/s) Selecting previously unselected package diffstat. (Reading database ... 41743 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package gpg. Preparing to unpack .../03-gpg_2.2.27-2_amd64.deb ... Unpacking gpg (2.2.27-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../04-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../05-libapt-pkg-perl_0.1.40_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40) ... Selecting previously unselected package libb-hooks-op-check-perl. 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Setting up libterm-readkey-perl (2.38-1+b2) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.08-1) ... Setting up gpg (2.2.27-2) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtype-tiny-perl (1.012004-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.005004-2) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.106.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.32-2) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 2629284 Build-Time: 1838 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 36 Job: bali-phy_3.6.1+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: bali-phy Package-Time: 1886 Source-Version: 3.6.1+dfsg-1 Space: 2629284 Status: successful Version: 3.6.1+dfsg-1 -------------------------------------------------------------------------------- Finished at 2021-09-14T12:41:58Z Build needed 00:31:26, 2629284k disk space