sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | bcftools 1.21-1 (s390x) Mon, 17 Feb 2025 07:43:14 +0000 | +==============================================================================+ Package: bcftools Version: 1.21-1 Source Version: 1.21-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-a3e66926-8666-42cc-9499-43aba2b98acf' with '<>' I: NOTICE: Log filtering will replace 'build/bcftools-OQkm62/resolver-j6YuVs' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [205 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/non-free-firmware Sources.diff/Index [63.3 kB] Get:4 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:5 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:7 http://localhost:3142/debian unstable/main Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [23.1 kB] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [658 B] Get:9 http://localhost:3142/debian unstable/non-free Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [418 B] Get:10 http://localhost:3142/debian unstable/contrib Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [309 B] Get:7 http://localhost:3142/debian unstable/main Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [23.1 kB] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [26.4 kB] Get:10 http://localhost:3142/debian unstable/contrib Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [309 B] Get:9 http://localhost:3142/debian unstable/non-free Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [418 B] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [658 B] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-02-17-0205.06-F-2025-02-17-0205.06.pdiff [26.4 kB] Get:12 http://localhost:3142/debian unstable/main s390x Packages [9664 kB] Fetched 10.2 MB in 2s (5131 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libapt-pkg6.0t64 Use 'apt autoremove' to remove it. The following NEW packages will be installed: libapt-pkg7.0 The following packages will be upgraded: apt libperl5.40 login.defs passwd perl perl-base perl-modules-5.40 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 13.2 MB of archives. After this operation, 3834 kB of additional disk space will be used. Get:1 http://localhost:3142/debian unstable/main amd64 perl-modules-5.40 all 5.40.1-2 [3017 kB] Get:2 http://localhost:3142/debian unstable/main amd64 libperl5.40 amd64 5.40.1-2 [4315 kB] Get:3 http://localhost:3142/debian unstable/main amd64 perl amd64 5.40.1-2 [267 kB] Get:4 http://localhost:3142/debian unstable/main amd64 perl-base amd64 5.40.1-2 [1665 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libapt-pkg7.0 amd64 2.9.30 [1104 kB] Get:6 http://localhost:3142/debian unstable/main amd64 apt amd64 2.9.30 [1440 kB] Get:7 http://localhost:3142/debian unstable/main amd64 login.defs all 1:4.17.2-3 [185 kB] Get:8 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.17.2-3 [1237 kB] Fetched 13.2 MB in 0s (188 MB/s) (Reading database ... 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Unpacking perl-base (5.40.1-2) over (5.40.0-8) ... Setting up perl-base (5.40.1-2) ... Selecting previously unselected package libapt-pkg7.0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12871 files and directories currently installed.) Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ... Unpacking libapt-pkg7.0:amd64 (2.9.30) ... Setting up libapt-pkg7.0:amd64 (2.9.30) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12920 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.17.2-3_all.deb ... Unpacking login.defs (1:4.17.2-3) over (1:4.17.2-2) ... Preparing to unpack .../passwd_1%3a4.17.2-3_amd64.deb ... Unpacking passwd (1:4.17.2-3) over (1:4.17.2-2) ... Setting up login.defs (1:4.17.2-3) ... Setting up passwd (1:4.17.2-3) ... Setting up perl-modules-5.40 (5.40.1-2) ... Setting up libperl5.40:amd64 (5.40.1-2) ... Setting up perl (5.40.1-2) ... Processing triggers for libc-bin (2.40-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'bcftools' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/bcftools.git Please use: git clone https://salsa.debian.org/med-team/bcftools.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3675 kB of source archives. Get:1 http://localhost:3142/debian unstable/main bcftools 1.21-1 (dsc) [2267 B] Get:2 http://localhost:3142/debian unstable/main bcftools 1.21-1 (tar) [3665 kB] Get:3 http://localhost:3142/debian unstable/main bcftools 1.21-1 (diff) [7504 B] Fetched 3675 kB in 0s (116 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/bcftools-OQkm62/bcftools-1.21' with '<>' I: NOTICE: Log filtering will replace 'build/bcftools-OQkm62' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, liblzma-dev, libhts-dev (>= 1.14), libgsl-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, liblzma-dev, libhts-dev (>= 1.14), libgsl-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [830 B] Get:5 copy:/<>/apt_archive ./ Packages [828 B] Fetched 2267 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... /usr/lib/apt/solvers/apt: /lib/x86_64-linux-gnu/libapt-private.so.0.0: no version information available (required by /usr/lib/apt/solvers/apt) Execute external solver... The following package was automatically installed and is no longer required: libapt-pkg6.0t64 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils comerr-dev:s390x cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:s390x libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbrotli-dev:s390x libbrotli1:s390x libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libcrypt-dev:s390x libcrypt1:s390x libcurl3t64-gnutls:s390x libcurl4-gnutls-dev:s390x libdb5.3t64:s390x libdebhelper-perl libdeflate-dev:s390x libdeflate0:s390x libelf1t64 libevent-2.1-7t64:s390x libfakeroot libffi8:s390x libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgmp-dev:s390x libgmp10:s390x libgmpxx4ldbl:s390x libgnutls-dane0t64:s390x libgnutls-openssl27t64:s390x libgnutls28-dev:s390x libgnutls30t64:s390x libgomp1:s390x libgomp1-s390x-cross libgsl-dev:s390x libgsl28:s390x libgslcblas0:s390x libgssapi-krb5-2:s390x libgssrpc4t64:s390x libhogweed6t64:s390x libhts-dev:s390x libhts3t64:s390x libhtscodecs2:s390x libicu72 libidn2-0:s390x libidn2-dev:s390x libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkadm5clnt-mit12:s390x libkadm5srv-mit12:s390x libkdb5-10t64:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5-dev:s390x libkrb5support0:s390x libldap-dev:s390x libldap2:s390x liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1t64 libnettle8t64:s390x libnghttp2-14:s390x libnghttp2-dev:s390x libnghttp3-9:s390x libnghttp3-dev:s390x libngtcp2-16:s390x libngtcp2-crypto-gnutls-dev:s390x libngtcp2-crypto-gnutls8:s390x libngtcp2-dev:s390x libp11-kit-dev:s390x libp11-kit0:s390x libpipeline1 libpkgconf3 libpsl-dev:s390x libpsl5t64:s390x librtmp-dev:s390x librtmp1:s390x libsasl2-2:s390x libsasl2-modules-db:s390x libssh2-1-dev:s390x libssh2-1t64:s390x libssl-dev:s390x libssl3t64:s390x libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtasn1-6:s390x libtasn1-6-dev:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunbound8:s390x libunistring5 libunistring5:s390x libxml2 libzstd-dev:s390x libzstd1:s390x linux-libc-dev-s390x-cross m4 man-db nettle-dev:s390x pkgconf:s390x pkgconf-bin po-debconf sensible-utils zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc doc-base:s390x gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc:s390x glibc-doc:s390x libc-l10n:s390x locales:s390x libnss-nis:s390x libnss-nisplus:s390x manpages-dev:s390x libcurl4-doc:s390x libidn-dev:s390x gmp-doc:s390x libgmp10-doc:s390x libmpfr-dev:s390x dns-root-data:s390x gnutls-bin:s390x gnutls-doc:s390x gsl-ref-psdoc:s390x | gsl-doc-pdf:s390x | gsl-doc-info:s390x | gsl-ref-html:s390x krb5-user:s390x liblzma-doc:s390x libnghttp2-doc:s390x p11-kit-doc:s390x libssl-doc:s390x libstdc++-14-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:s390x ca-certificates:s390x libarchive-cpio-perl krb5-locales:s390x libldap-common:s390x publicsuffix:s390x libsasl2-modules:s390x libtasn1-doc:s390x libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils comerr-dev:s390x cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:s390x libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbrotli-dev:s390x libbrotli1:s390x libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libcrypt-dev:s390x libcrypt1:s390x libcurl3t64-gnutls:s390x libcurl4-gnutls-dev:s390x libdb5.3t64:s390x libdebhelper-perl libdeflate-dev:s390x libdeflate0:s390x libelf1t64 libevent-2.1-7t64:s390x libfakeroot libffi8:s390x libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgmp-dev:s390x libgmp10:s390x libgmpxx4ldbl:s390x libgnutls-dane0t64:s390x libgnutls-openssl27t64:s390x libgnutls28-dev:s390x libgnutls30t64:s390x libgomp1:s390x libgomp1-s390x-cross libgsl-dev:s390x libgsl28:s390x libgslcblas0:s390x libgssapi-krb5-2:s390x libgssrpc4t64:s390x libhogweed6t64:s390x libhts-dev:s390x libhts3t64:s390x libhtscodecs2:s390x libicu72 libidn2-0:s390x libidn2-dev:s390x libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkadm5clnt-mit12:s390x libkadm5srv-mit12:s390x libkdb5-10t64:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5-dev:s390x libkrb5support0:s390x libldap-dev:s390x libldap2:s390x liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1t64 libnettle8t64:s390x libnghttp2-14:s390x libnghttp2-dev:s390x libnghttp3-9:s390x libnghttp3-dev:s390x libngtcp2-16:s390x libngtcp2-crypto-gnutls-dev:s390x libngtcp2-crypto-gnutls8:s390x libngtcp2-dev:s390x libp11-kit-dev:s390x libp11-kit0:s390x libpipeline1 libpkgconf3 libpsl-dev:s390x libpsl5t64:s390x librtmp-dev:s390x librtmp1:s390x libsasl2-2:s390x libsasl2-modules-db:s390x libssh2-1-dev:s390x libssh2-1t64:s390x libssl-dev:s390x libssl3t64:s390x libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtasn1-6:s390x libtasn1-6-dev:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunbound8:s390x libunistring5 libunistring5:s390x libxml2 libzstd-dev:s390x libzstd1:s390x linux-libc-dev-s390x-cross m4 man-db nettle-dev:s390x pkgconf:s390x pkgconf-bin po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 146 newly installed, 0 to remove and 0 not upgraded. Need to get 111 MB of archives. After this operation, 421 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:5 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:6 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:8 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:9 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.4-3 [92.1 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:12 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get:13 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:15 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-3 [862 kB] Get:16 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:17 http://localhost:3142/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.44-1 [1307 kB] Get:18 http://localhost:3142/debian unstable/main s390x gcc-14-base s390x 14.2.0-17 [49.1 kB] Get:19 http://localhost:3142/debian unstable/main s390x libgcc-s1 s390x 14.2.0-17 [31.9 kB] Get:20 http://localhost:3142/debian unstable/main s390x libc6 s390x 2.40-7 [2421 kB] Get:21 http://localhost:3142/debian unstable/main s390x libcrypt1 s390x 1:4.4.38-1 [94.0 kB] Get:22 http://localhost:3142/debian unstable/main s390x libcrypt-dev s390x 1:4.4.38-1 [123 kB] Get:23 http://localhost:3142/debian unstable/main s390x libc6-dev s390x 2.40-7 [1531 kB] Get:24 http://localhost:3142/debian unstable/main s390x libcom-err2 s390x 1.47.2-1 [23.9 kB] Get:25 http://localhost:3142/debian unstable/main s390x comerr-dev s390x 2.1-1.47.2-1 [55.5 kB] Get:26 http://localhost:3142/debian unstable/main amd64 gcc-14-s390x-linux-gnu-base amd64 14.2.0-12cross1 [48.5 kB] Get:27 http://localhost:3142/debian unstable/main amd64 cpp-14-s390x-linux-gnu amd64 14.2.0-12cross1 [9413 kB] Get:28 http://localhost:3142/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:29 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-12cross1 [43.7 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libc6-s390x-cross all 2.40-4cross1 [1140 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libgcc-s1-s390x-cross all 14.2.0-12cross1 [31.9 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libgomp1-s390x-cross all 14.2.0-12cross1 [129 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libitm1-s390x-cross all 14.2.0-12cross1 [26.4 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libatomic1-s390x-cross all 14.2.0-12cross1 [8296 B] Get:35 http://localhost:3142/debian unstable/main amd64 libasan8-s390x-cross all 14.2.0-12cross1 [2564 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libstdc++6-s390x-cross all 14.2.0-12cross1 [713 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libubsan1-s390x-cross all 14.2.0-12cross1 [1056 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-s390x-cross all 14.2.0-12cross1 [877 kB] Get:39 http://localhost:3142/debian unstable/main amd64 gcc-14-s390x-linux-gnu amd64 14.2.0-12cross1 [17.8 MB] Get:40 http://localhost:3142/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:14.2.0-1 [1448 B] Get:41 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-s390x-cross all 6.12.6-1cross1 [2316 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libc6-dev-s390x-cross all 2.40-4cross1 [1522 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-s390x-cross all 14.2.0-12cross1 [2392 kB] Get:44 http://localhost:3142/debian unstable/main amd64 g++-14-s390x-linux-gnu amd64 14.2.0-12cross1 [10.4 MB] Get:45 http://localhost:3142/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:46 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-s390x all 12.12 [3548 B] Get:47 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB] Get:49 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:52 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:53 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:54 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:58 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:59 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:60 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:61 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37-1 [29.7 kB] Get:63 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37-1 [75.6 kB] Get:64 http://localhost:3142/debian unstable/main s390x libkrb5support0 s390x 1.21.3-4 [32.9 kB] Get:65 http://localhost:3142/debian unstable/main s390x libk5crypto3 s390x 1.21.3-4 [83.5 kB] Get:66 http://localhost:3142/debian unstable/main s390x libkeyutils1 s390x 1.6.3-4 [9112 B] Get:67 http://localhost:3142/debian unstable/main s390x libzstd1 s390x 1.5.6+dfsg-2 [320 kB] Get:68 http://localhost:3142/debian unstable/main s390x zlib1g s390x 1:1.3.dfsg+really1.3.1-1+b1 [86.9 kB] Get:69 http://localhost:3142/debian unstable/main s390x libssl3t64 s390x 3.4.1-1 [1910 kB] Get:70 http://localhost:3142/debian unstable/main s390x libkrb5-3 s390x 1.21.3-4 [318 kB] Get:71 http://localhost:3142/debian unstable/main s390x libgssapi-krb5-2 s390x 1.21.3-4 [132 kB] Get:72 http://localhost:3142/debian unstable/main s390x libgssrpc4t64 s390x 1.21.3-4 [58.4 kB] Get:73 http://localhost:3142/debian unstable/main s390x libkadm5clnt-mit12 s390x 1.21.3-4 [40.9 kB] Get:74 http://localhost:3142/debian unstable/main s390x libkdb5-10t64 s390x 1.21.3-4 [42.3 kB] Get:75 http://localhost:3142/debian unstable/main s390x libkadm5srv-mit12 s390x 1.21.3-4 [53.9 kB] Get:76 http://localhost:3142/debian unstable/main s390x krb5-multidev s390x 1.21.3-4 [126 kB] Get:77 http://localhost:3142/debian unstable/main s390x libasan8 s390x 14.2.0-17 [2570 kB] Get:78 http://localhost:3142/debian unstable/main s390x libatomic1 s390x 14.2.0-17 [8588 B] Get:79 http://localhost:3142/debian unstable/main s390x libbrotli1 s390x 1.1.0-2+b6 [327 kB] Get:80 http://localhost:3142/debian unstable/main s390x libbrotli-dev s390x 1.1.0-2+b6 [344 kB] Get:81 http://localhost:3142/debian unstable/main s390x libbz2-1.0 s390x 1.0.8-6 [42.3 kB] Get:82 http://localhost:3142/debian unstable/main s390x libbz2-dev s390x 1.0.8-6 [35.9 kB] Get:83 http://localhost:3142/debian unstable/main s390x libgmp10 s390x 2:6.3.0+dfsg-3 [604 kB] Get:84 http://localhost:3142/debian unstable/main s390x libnettle8t64 s390x 3.10.1-1 [319 kB] Get:85 http://localhost:3142/debian unstable/main s390x libhogweed6t64 s390x 3.10.1-1 [337 kB] Get:86 http://localhost:3142/debian unstable/main s390x libunistring5 s390x 1.3-1 [470 kB] Get:87 http://localhost:3142/debian unstable/main s390x libidn2-0 s390x 2.3.7-2+b1 [128 kB] Get:88 http://localhost:3142/debian unstable/main s390x libffi8 s390x 3.4.7-1 [21.0 kB] Get:89 http://localhost:3142/debian unstable/main s390x libp11-kit0 s390x 0.25.5-3 [429 kB] Get:90 http://localhost:3142/debian unstable/main s390x libtasn1-6 s390x 4.20.0-2 [48.8 kB] Get:91 http://localhost:3142/debian unstable/main s390x libgnutls30t64 s390x 3.8.9-2 [1382 kB] Get:92 http://localhost:3142/debian unstable/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-9 [673 kB] Get:93 http://localhost:3142/debian unstable/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-8+b1 [19.6 kB] Get:94 http://localhost:3142/debian unstable/main s390x libsasl2-2 s390x 2.1.28+dfsg1-8+b1 [57.1 kB] Get:95 http://localhost:3142/debian unstable/main s390x libldap2 s390x 2.6.9+dfsg-1 [187 kB] Get:96 http://localhost:3142/debian unstable/main s390x libnghttp2-14 s390x 1.64.0-1 [72.8 kB] Get:97 http://localhost:3142/debian unstable/main s390x libnghttp3-9 s390x 1.6.0-2 [61.6 kB] Get:98 http://localhost:3142/debian unstable/main s390x libngtcp2-16 s390x 1.9.1-1 [113 kB] Get:99 http://localhost:3142/debian unstable/main s390x libngtcp2-crypto-gnutls8 s390x 1.9.1-1 [17.0 kB] Get:100 http://localhost:3142/debian unstable/main s390x libpsl5t64 s390x 0.21.2-1.1+b1 [57.2 kB] Get:101 http://localhost:3142/debian unstable/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2+b5 [57.0 kB] Get:102 http://localhost:3142/debian unstable/main s390x libssh2-1t64 s390x 1.11.1-1 [238 kB] Get:103 http://localhost:3142/debian unstable/main s390x libcurl3t64-gnutls s390x 8.12.1-2 [350 kB] Get:104 http://localhost:3142/debian unstable/main s390x libevent-2.1-7t64 s390x 2.1.12-stable-10+b1 [175 kB] Get:105 http://localhost:3142/debian unstable/main s390x libunbound8 s390x 1.22.0-1+b1 [571 kB] Get:106 http://localhost:3142/debian unstable/main s390x libgnutls-dane0t64 s390x 3.8.9-2 [455 kB] Get:107 http://localhost:3142/debian unstable/main s390x libgnutls-openssl27t64 s390x 3.8.9-2 [455 kB] Get:108 http://localhost:3142/debian unstable/main s390x libidn2-dev s390x 2.3.7-2+b1 [122 kB] Get:109 http://localhost:3142/debian unstable/main s390x libp11-kit-dev s390x 0.25.5-3 [208 kB] Get:110 http://localhost:3142/debian unstable/main s390x libtasn1-6-dev s390x 4.20.0-2 [98.4 kB] Get:111 http://localhost:3142/debian unstable/main s390x libstdc++6 s390x 14.2.0-17 [762 kB] Get:112 http://localhost:3142/debian unstable/main s390x libgmpxx4ldbl s390x 2:6.3.0+dfsg-3 [329 kB] Get:113 http://localhost:3142/debian unstable/main s390x libgmp-dev s390x 2:6.3.0+dfsg-3 [686 kB] Get:114 http://localhost:3142/debian unstable/main s390x nettle-dev s390x 3.10.1-1 [1333 kB] Get:115 http://localhost:3142/debian unstable/main s390x libgnutls28-dev s390x 3.8.9-2 [1318 kB] Get:116 http://localhost:3142/debian unstable/main s390x libkrb5-dev s390x 1.21.3-4 [15.9 kB] Get:117 http://localhost:3142/debian unstable/main s390x libldap-dev s390x 2.6.9+dfsg-1 [303 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:119 http://localhost:3142/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:120 http://localhost:3142/debian unstable/main s390x pkgconf s390x 1.8.1-4 [26.2 kB] Get:121 http://localhost:3142/debian unstable/main s390x libnghttp2-dev s390x 1.64.0-1 [113 kB] Get:122 http://localhost:3142/debian unstable/main s390x libnghttp3-dev s390x 1.6.0-2 [86.6 kB] Get:123 http://localhost:3142/debian unstable/main s390x libngtcp2-crypto-gnutls-dev s390x 1.9.1-1 [21.9 kB] Get:124 http://localhost:3142/debian unstable/main s390x libngtcp2-dev s390x 1.9.1-1 [163 kB] Get:125 http://localhost:3142/debian unstable/main s390x libpsl-dev s390x 0.21.2-1.1+b1 [77.8 kB] Get:126 http://localhost:3142/debian unstable/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1+b1 [918 kB] Get:127 http://localhost:3142/debian unstable/main s390x librtmp-dev s390x 2.4+20151223.gitfa8646d.1-2+b5 [67.2 kB] Get:128 http://localhost:3142/debian unstable/main s390x libssl-dev s390x 3.4.1-1 [2410 kB] Get:129 http://localhost:3142/debian unstable/main s390x libssh2-1-dev s390x 1.11.1-1 [388 kB] Get:130 http://localhost:3142/debian unstable/main s390x libzstd-dev s390x 1.5.6+dfsg-2 [385 kB] Get:131 http://localhost:3142/debian unstable/main s390x libcurl4-gnutls-dev s390x 8.12.1-2 [471 kB] Get:132 http://localhost:3142/debian unstable/main s390x libdeflate0 s390x 1.23-1+b1 [41.8 kB] Get:133 http://localhost:3142/debian unstable/main s390x libdeflate-dev s390x 1.23-1+b1 [49.5 kB] Get:134 http://localhost:3142/debian unstable/main s390x libgomp1 s390x 14.2.0-17 [132 kB] Get:135 http://localhost:3142/debian unstable/main s390x libitm1 s390x 14.2.0-17 [26.8 kB] Get:136 http://localhost:3142/debian unstable/main s390x libubsan1 s390x 14.2.0-17 [1056 kB] Get:137 http://localhost:3142/debian unstable/main s390x libgcc-14-dev s390x 14.2.0-17 [876 kB] Get:138 http://localhost:3142/debian unstable/main s390x libgslcblas0 s390x 2.8+dfsg-5 [135 kB] Get:139 http://localhost:3142/debian unstable/main s390x libgsl28 s390x 2.8+dfsg-5 [1022 kB] Get:140 http://localhost:3142/debian unstable/main s390x libgsl-dev s390x 2.8+dfsg-5 [1253 kB] Get:141 http://localhost:3142/debian unstable/main s390x libhtscodecs2 s390x 1.6.1-2 [85.1 kB] Get:142 http://localhost:3142/debian unstable/main s390x liblzma5 s390x 5.6.3-1+b1 [273 kB] Get:143 http://localhost:3142/debian unstable/main s390x libhts3t64 s390x 1.21+ds-1 [462 kB] Get:144 http://localhost:3142/debian unstable/main s390x liblzma-dev s390x 5.6.3-1+b1 [316 kB] Get:145 http://localhost:3142/debian unstable/main s390x libhts-dev s390x 1.21+ds-1 [1691 kB] Get:146 http://localhost:3142/debian unstable/main s390x libstdc++-14-dev s390x 14.2.0-17 [2403 kB] Preconfiguring packages ... Fetched 111 MB in 2s (57.0 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 12920 files and directories currently installed.) Preparing to unpack .../000-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../001-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../002-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../003-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../004-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. 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Selecting previously unselected package libc6:s390x. Preparing to unpack .../018-libc6_2.40-7_s390x.deb ... Unpacking libc6:s390x (2.40-7) ... Selecting previously unselected package libcrypt1:s390x. Preparing to unpack .../019-libcrypt1_1%3a4.4.38-1_s390x.deb ... Unpacking libcrypt1:s390x (1:4.4.38-1) ... Selecting previously unselected package libcrypt-dev:s390x. Preparing to unpack .../020-libcrypt-dev_1%3a4.4.38-1_s390x.deb ... Unpacking libcrypt-dev:s390x (1:4.4.38-1) ... Selecting previously unselected package libc6-dev:s390x. Preparing to unpack .../021-libc6-dev_2.40-7_s390x.deb ... Unpacking libc6-dev:s390x (2.40-7) ... Selecting previously unselected package libcom-err2:s390x. Preparing to unpack .../022-libcom-err2_1.47.2-1_s390x.deb ... Unpacking libcom-err2:s390x (1.47.2-1) ... Selecting previously unselected package comerr-dev:s390x. Preparing to unpack .../023-comerr-dev_2.1-1.47.2-1_s390x.deb ... Unpacking comerr-dev:s390x (2.1-1.47.2-1) ... Selecting previously unselected package gcc-14-s390x-linux-gnu-base:amd64. Preparing to unpack .../024-gcc-14-s390x-linux-gnu-base_14.2.0-12cross1_amd64.deb ... Unpacking gcc-14-s390x-linux-gnu-base:amd64 (14.2.0-12cross1) ... Selecting previously unselected package cpp-14-s390x-linux-gnu. Preparing to unpack .../025-cpp-14-s390x-linux-gnu_14.2.0-12cross1_amd64.deb ... Unpacking cpp-14-s390x-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package cpp-s390x-linux-gnu. Preparing to unpack .../026-cpp-s390x-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking cpp-s390x-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../027-gcc-14-cross-base_14.2.0-12cross1_all.deb ... Unpacking gcc-14-cross-base (14.2.0-12cross1) ... Selecting previously unselected package libc6-s390x-cross. Preparing to unpack .../028-libc6-s390x-cross_2.40-4cross1_all.deb ... Unpacking libc6-s390x-cross (2.40-4cross1) ... Selecting previously unselected package libgcc-s1-s390x-cross. Preparing to unpack .../029-libgcc-s1-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libgcc-s1-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libgomp1-s390x-cross. Preparing to unpack .../030-libgomp1-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libgomp1-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libitm1-s390x-cross. Preparing to unpack .../031-libitm1-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libitm1-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libatomic1-s390x-cross. Preparing to unpack .../032-libatomic1-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libatomic1-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libasan8-s390x-cross. Preparing to unpack .../033-libasan8-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libasan8-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libstdc++6-s390x-cross. Preparing to unpack .../034-libstdc++6-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libstdc++6-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libubsan1-s390x-cross. Preparing to unpack .../035-libubsan1-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libubsan1-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package libgcc-14-dev-s390x-cross. Preparing to unpack .../036-libgcc-14-dev-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libgcc-14-dev-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package gcc-14-s390x-linux-gnu. Preparing to unpack .../037-gcc-14-s390x-linux-gnu_14.2.0-12cross1_amd64.deb ... Unpacking gcc-14-s390x-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package gcc-s390x-linux-gnu. Preparing to unpack .../038-gcc-s390x-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking gcc-s390x-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package linux-libc-dev-s390x-cross. Preparing to unpack .../039-linux-libc-dev-s390x-cross_6.12.6-1cross1_all.deb ... Unpacking linux-libc-dev-s390x-cross (6.12.6-1cross1) ... Selecting previously unselected package libc6-dev-s390x-cross. Preparing to unpack .../040-libc6-dev-s390x-cross_2.40-4cross1_all.deb ... Unpacking libc6-dev-s390x-cross (2.40-4cross1) ... Selecting previously unselected package libstdc++-14-dev-s390x-cross. Preparing to unpack .../041-libstdc++-14-dev-s390x-cross_14.2.0-12cross1_all.deb ... Unpacking libstdc++-14-dev-s390x-cross (14.2.0-12cross1) ... Selecting previously unselected package g++-14-s390x-linux-gnu. Preparing to unpack .../042-g++-14-s390x-linux-gnu_14.2.0-12cross1_amd64.deb ... Unpacking g++-14-s390x-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package g++-s390x-linux-gnu. Preparing to unpack .../043-g++-s390x-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking g++-s390x-linux-gnu (4:14.2.0-1) ... 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Unpacking libgcc-14-dev:s390x (14.2.0-17) ... Selecting previously unselected package libgslcblas0:s390x. Preparing to unpack .../136-libgslcblas0_2.8+dfsg-5_s390x.deb ... Unpacking libgslcblas0:s390x (2.8+dfsg-5) ... Selecting previously unselected package libgsl28:s390x. Preparing to unpack .../137-libgsl28_2.8+dfsg-5_s390x.deb ... Unpacking libgsl28:s390x (2.8+dfsg-5) ... Selecting previously unselected package libgsl-dev:s390x. Preparing to unpack .../138-libgsl-dev_2.8+dfsg-5_s390x.deb ... Unpacking libgsl-dev:s390x (2.8+dfsg-5) ... Selecting previously unselected package libhtscodecs2:s390x. Preparing to unpack .../139-libhtscodecs2_1.6.1-2_s390x.deb ... Unpacking libhtscodecs2:s390x (1.6.1-2) ... Selecting previously unselected package liblzma5:s390x. Preparing to unpack .../140-liblzma5_5.6.3-1+b1_s390x.deb ... Unpacking liblzma5:s390x (5.6.3-1+b1) ... Selecting previously unselected package libhts3t64:s390x. Preparing to unpack .../141-libhts3t64_1.21+ds-1_s390x.deb ... Unpacking libhts3t64:s390x (1.21+ds-1) ... Selecting previously unselected package liblzma-dev:s390x. Preparing to unpack .../142-liblzma-dev_5.6.3-1+b1_s390x.deb ... Unpacking liblzma-dev:s390x (5.6.3-1+b1) ... Selecting previously unselected package libhts-dev:s390x. Preparing to unpack .../143-libhts-dev_1.21+ds-1_s390x.deb ... Unpacking libhts-dev:s390x (1.21+ds-1) ... Selecting previously unselected package libstdc++-14-dev:s390x. Preparing to unpack .../144-libstdc++-14-dev_14.2.0-17_s390x.deb ... Unpacking libstdc++-14-dev:s390x (14.2.0-17) ... Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../145-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up binutils-s390x-linux-gnu (2.44-1) ... Setting up gcc-14-s390x-linux-gnu-base:amd64 (14.2.0-12cross1) ... Setting up bsdextrautils (2.40.4-3) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up gcc-14-base:s390x (14.2.0-17) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libc6-s390x-cross (2.40-4cross1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up gcc-14-cross-base (14.2.0-12cross1) ... Setting up file (1:5.45-3+b1) ... Setting up libfakeroot:amd64 (1.37-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up linux-libc-dev-s390x-cross (6.12.6-1cross1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up libgcc-s1-s390x-cross (14.2.0-12cross1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up cpp-14-s390x-linux-gnu (14.2.0-12cross1) ... Setting up autoconf (2.72-3) ... Setting up libitm1-s390x-cross (14.2.0-12cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libc6-dev-s390x-cross (2.40-4cross1) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libgomp1-s390x-cross (14.2.0-12cross1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up cpp-s390x-linux-gnu (4:14.2.0-1) ... Setting up libtool (2.5.4-3) ... Setting up libstdc++6-s390x-cross (14.2.0-12cross1) ... Setting up libatomic1-s390x-cross (14.2.0-12cross1) ... Setting up libasan8-s390x-cross (14.2.0-12cross1) ... Setting up pkgconf:s390x (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libubsan1-s390x-cross (14.2.0-12cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-s390x-cross (14.2.0-12cross1) ... Setting up debhelper (13.24.1) ... Setting up gcc-14-s390x-linux-gnu (14.2.0-12cross1) ... Setting up gcc-s390x-linux-gnu (4:14.2.0-1) ... Setting up libstdc++-14-dev-s390x-cross (14.2.0-12cross1) ... Setting up g++-14-s390x-linux-gnu (14.2.0-12cross1) ... Setting up g++-s390x-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-s390x (12.12) ... Setting up libgcc-s1:s390x (14.2.0-17) ... Setting up libc6:s390x (2.40-7) ... Setting up libnghttp3-9:s390x (1.6.0-2) ... Setting up libnghttp3-dev:s390x (1.6.0-2) ... Setting up libdb5.3t64:s390x (5.3.28+dfsg2-9) ... Setting up libffi8:s390x (3.4.7-1) ... Setting up libasan8:s390x (14.2.0-17) ... Setting up libtasn1-6:s390x (4.20.0-2) ... Setting up libngtcp2-16:s390x (1.9.1-1) ... Setting up libbz2-1.0:s390x (1.0.8-6) ... Setting up libtasn1-6-dev:s390x (4.20.0-2) ... Setting up libstdc++6:s390x (14.2.0-17) ... Setting up libitm1:s390x (14.2.0-17) ... Setting up libhtscodecs2:s390x (1.6.1-2) ... Setting up libzstd1:s390x (1.5.6+dfsg-2) ... Setting up libkeyutils1:s390x (1.6.3-4) ... Setting up libzstd-dev:s390x (1.5.6+dfsg-2) ... Setting up liblzma5:s390x (5.6.3-1+b1) ... Setting up libgslcblas0:s390x (2.8+dfsg-5) ... Setting up libbrotli1:s390x (1.1.0-2+b6) ... Setting up libnghttp2-14:s390x (1.64.0-1) ... Setting up libdeflate0:s390x (1.23-1+b1) ... Setting up libevent-2.1-7t64:s390x (2.1.12-stable-10+b1) ... Setting up zlib1g:s390x (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:s390x (1:4.4.38-1) ... Setting up libcom-err2:s390x (1.47.2-1) ... Setting up libngtcp2-dev:s390x (1.9.1-1) ... Setting up libgomp1:s390x (14.2.0-17) ... Setting up libkrb5support0:s390x (1.21.3-4) ... Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-8+b1) ... Setting up libnettle8t64:s390x (3.10.1-1) ... Setting up libgmp10:s390x (2:6.3.0+dfsg-3) ... Setting up libp11-kit0:s390x (0.25.5-3) ... Setting up libunistring5:s390x (1.3-1) ... Setting up libatomic1:s390x (14.2.0-17) ... Setting up libk5crypto3:s390x (1.21.3-4) ... Setting up liblzma-dev:s390x (5.6.3-1+b1) ... Setting up libubsan1:s390x (14.2.0-17) ... Setting up libhogweed6t64:s390x (3.10.1-1) ... Setting up libcrypt-dev:s390x (1:4.4.38-1) ... Setting up libc6-dev:s390x (2.40-7) ... Setting up libgcc-14-dev:s390x (14.2.0-17) ... Setting up libgsl28:s390x (2.8+dfsg-5) ... Setting up libdeflate-dev:s390x (1.23-1+b1) ... Setting up libstdc++-14-dev:s390x (14.2.0-17) ... Setting up libbrotli-dev:s390x (1.1.0-2+b6) ... Setting up libp11-kit-dev:s390x (0.25.5-3) ... Setting up libbz2-dev:s390x (1.0.8-6) ... Setting up libnghttp2-dev:s390x (1.64.0-1) ... Setting up libgsl-dev:s390x (2.8+dfsg-5) ... Setting up libssl3t64:s390x (3.4.1-1) ... Setting up libidn2-0:s390x (2.3.7-2+b1) ... Setting up libunbound8:s390x (1.22.0-1+b1) ... Setting up libgmpxx4ldbl:s390x (2:6.3.0+dfsg-3) ... Setting up comerr-dev:s390x (2.1-1.47.2-1) ... Setting up libssl-dev:s390x (3.4.1-1) ... Setting up libidn2-dev:s390x (2.3.7-2+b1) ... Setting up libsasl2-2:s390x (2.1.28+dfsg1-8+b1) ... Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libkrb5-3:s390x (1.21.3-4) ... Setting up libssh2-1t64:s390x (1.11.1-1) ... Setting up libldap2:s390x (2.6.9+dfsg-1) ... Setting up libgnutls30t64:s390x (3.8.9-2) ... Setting up libgnutls-openssl27t64:s390x (3.8.9-2) ... Setting up libgmp-dev:s390x (2:6.3.0+dfsg-3) ... Setting up nettle-dev:s390x (3.10.1-1) ... Setting up libpsl5t64:s390x (0.21.2-1.1+b1) ... Setting up libpsl-dev:s390x (0.21.2-1.1+b1) ... Setting up libgnutls-dane0t64:s390x (3.8.9-2) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libldap-dev:s390x (2.6.9+dfsg-1) ... Setting up libgssapi-krb5-2:s390x (1.21.3-4) ... Setting up libssh2-1-dev:s390x (1.11.1-1) ... Setting up libngtcp2-crypto-gnutls8:s390x (1.9.1-1) ... Setting up libgnutls28-dev:s390x (3.8.9-2) ... Setting up libcurl3t64-gnutls:s390x (8.12.1-2) ... Setting up libngtcp2-crypto-gnutls-dev:s390x (1.9.1-1) ... Setting up libgssrpc4t64:s390x (1.21.3-4) ... Setting up librtmp-dev:s390x (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhts3t64:s390x (1.21+ds-1) ... Setting up libkadm5clnt-mit12:s390x (1.21.3-4) ... Setting up libkdb5-10t64:s390x (1.21.3-4) ... Setting up libkadm5srv-mit12:s390x (1.21.3-4) ... Setting up krb5-multidev:s390x (1.21.3-4) ... Setting up libkrb5-dev:s390x (1.21.3-4) ... Setting up libcurl4-gnutls-dev:s390x (8.12.1-2) ... Setting up libhts-dev:s390x (1.21+ds-1) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.40-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) amd64 (x86_64) Toolchain package versions: binutils_2.44-1 dpkg-dev_1.22.15 g++-14_14.2.0-17 gcc-14_14.2.0-17 libc6-dev_2.40-7 libstdc++-14-dev_14.2.0-17 libstdc++-14-dev-s390x-cross_14.2.0-12cross1 libstdc++6_14.2.0-17 libstdc++6-s390x-cross_14.2.0-12cross1 linux-libc-dev_6.12.13-1 Package versions: apt_2.9.30 autoconf_2.72-3 automake_1:1.17-3 autopoint_0.23.1-1 autotools-dev_20220109.1 base-files_13.6 base-passwd_3.6.6 bash_5.2.37-1 binutils_2.44-1 binutils-common_2.44-1 binutils-s390x-linux-gnu_2.44-1 binutils-x86-64-linux-gnu_2.44-1 bsdextrautils_2.40.4-3 bsdutils_1:2.40.4-3 build-essential_12.12 bzip2_1.0.8-6 comerr-dev_2.1-1.47.2-1 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-17 cpp-14-s390x-linux-gnu_14.2.0-12cross1 cpp-14-x86-64-linux-gnu_14.2.0-17 cpp-s390x-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-s390x_12.12 dash_0.5.12-12 debconf_1.5.89 debhelper_13.24.1 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-2 dpkg_1.22.15 dpkg-dev_1.22.15 dwz_0.15-1+b1 e2fsprogs_1.47.2-1 fakeroot_1.37-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-17 g++-14-s390x-linux-gnu_14.2.0-12cross1 g++-14-x86-64-linux-gnu_14.2.0-17 g++-s390x-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-17 gcc-14-base_14.2.0-17 gcc-14-cross-base_14.2.0-12cross1 gcc-14-s390x-linux-gnu_14.2.0-12cross1 gcc-14-s390x-linux-gnu-base_14.2.0-12cross1 gcc-14-x86-64-linux-gnu_14.2.0-17 gcc-s390x-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-4 libacl1_2.3.2-2+b1 libapt-pkg6.0t64_2.9.29 libapt-pkg7.0_2.9.30 libarchive-zip-perl_1.68-1 libasan8_14.2.0-17 libasan8-s390x-cross_14.2.0-12cross1 libatomic1_14.2.0-17 libatomic1-s390x-cross_14.2.0-12cross1 libattr1_1:2.5.2-2 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b1 libbinutils_2.44-1 libblkid1_2.40.4-3 libbrotli-dev_1.1.0-2+b6 libbrotli1_1.1.0-2+b6 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.40-7 libc-dev-bin_2.40-7 libc6_2.40-7 libc6-dev_2.40-7 libc6-dev-s390x-cross_2.40-4cross1 libc6-s390x-cross_2.40-4cross1 libcap-ng0_0.8.5-4 libcap2_1:2.66-5+b1 libcc1-0_14.2.0-17 libcom-err2_1.47.2-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-1 libctf0_2.44-1 libcurl3t64-gnutls_8.12.1-2 libcurl4-gnutls-dev_8.12.1-2 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.277 libdebhelper-perl_13.24.1 libdeflate-dev_1.23-1+b1 libdeflate0_1.23-1+b1 libdpkg-perl_1.22.15 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libext2fs2t64_1.47.2-1 libfakeroot_1.37-1 libffi8_3.4.7-1 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.2.0-17 libgcc-14-dev-s390x-cross_14.2.0-12cross1 libgcc-s1_14.2.0-17 libgcc-s1-s390x-cross_14.2.0-12cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-17 libgomp1-s390x-cross_14.2.0-12cross1 libgprofng0_2.44-1 libgsl-dev_2.8+dfsg-5 libgsl28_2.8+dfsg-5 libgslcblas0_2.8+dfsg-5 libgssapi-krb5-2_1.21.3-4 libgssrpc4t64_1.21.3-4 libhogweed6t64_3.10.1-1 libhts-dev_1.21+ds-1 libhts3t64_1.21+ds-1 libhtscodecs2_1.6.1-2 libhwasan0_14.2.0-17 libicu72_72.1-6 libidn2-0_2.3.7-2+b1 libidn2-dev_2.3.7-2+b1 libisl23_0.27-1 libitm1_14.2.0-17 libitm1-s390x-cross_14.2.0-12cross1 libjansson4_2.14-2+b3 libk5crypto3_1.21.3-4 libkadm5clnt-mit12_1.21.3-4 libkadm5srv-mit12_1.21.3-4 libkdb5-10t64_1.21.3-4 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-4 libkrb5-dev_1.21.3-4 libkrb5support0_1.21.3-4 libldap-dev_2.6.9+dfsg-1 libldap2_2.6.9+dfsg-1 liblsan0_14.2.0-17 liblz4-1_1.10.0-3 liblzma-dev_5.6.3-1+b1 liblzma5_5.6.3-1+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmd0_1.1.0-2+b1 libmount1_2.40.4-3 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1 libnghttp2-dev_1.64.0-1 libnghttp3-9_1.6.0-2 libnghttp3-dev_1.6.0-2 libngtcp2-16_1.9.1-1 libngtcp2-crypto-gnutls-dev_1.9.1-1 libngtcp2-crypto-gnutls8_1.9.1-1 libngtcp2-dev_1.9.1-1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: bcftools Binary: bcftools Architecture: any Version: 1.21-1 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Étienne Mollier Homepage: https://samtools.github.io/bcftools/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/bcftools Vcs-Git: https://salsa.debian.org/med-team/bcftools.git Testsuite: autopkgtest Testsuite-Triggers: perl, tabix Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, liblzma-dev, libhts-dev (>= 1.14), libgsl-dev, tabix , libio-pty-perl Package-List: bcftools deb science optional arch=any Checksums-Sha1: 7f367e0f03d4f56ca88d5f3a79435f196591fbce 3665160 bcftools_1.21.orig.tar.gz 5b3b3f9251d64665efa2c5ed61c6e2aef032cde1 7504 bcftools_1.21-1.debian.tar.xz Checksums-Sha256: 7484695c5d833fb1a89c2b886ec302db0514ba3c8e5ef7397b9302fa8bd37f8d 3665160 bcftools_1.21.orig.tar.gz d1332716453f270248afa7476a5a824b0289150a7829442f691559209dcc38cf 7504 bcftools_1.21-1.debian.tar.xz Files: e144a5777c606c69eb643ae8ff613dbb 3665160 bcftools_1.21.orig.tar.gz 756abc1b4df76e455bd705ddf6ef5c9e 7504 bcftools_1.21-1.debian.tar.xz Dgit: 1cbbbd21cccc5d95d73df54271b167d9e450842a debian archive/debian/1.21-1 https://git.dgit.debian.org/bcftools -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmeuYIEUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpyzRAAlczvukE0/A+j5esHHalBAeaq8nnO SC4BULLNsaVcn31OlRTGS1RXt1zU6u3ise+jLfRMAbhM4Qx57Ek9S+2+uvX2M5lh 6Wlz3M6DvyTEXN0MZTztIinmdxODYf/IiD8d4qDf8KYZNBeKE+spfINNeRiWyl6e /QXwVTUB0jRc5ZBqsOONR4uOliMKk3LWUy3xwM3YzUKhVlFQpf2OJXk5bQSew6NM PIwjBLcHdDE42tplpMuRjT0FdWk4i8EeZlR8oIdBwoVc1ffNqRpWbz77OJouDhe8 dz7kPHok/2DEBod4k3yeIZH0deK+G47sycXhhSOA7IS+43opAYIHFscpHZMdnoaA lQjIMES546gBHagarHdb5dbHKcvWuq2aQdsuyc0Z2kOnS4Kaop/YugT14ba0pu73 50x5eyPJL2LgnFDb+36HygKNL0CCA6v6EOC7qEU5zzqkmXYXBWEKGxht4KvXbdtc NAvxqxbw2AtQF1kRH6dur00lo9ZCjVq+wa5NnQHZh+BILAIrdo8lpM5Gm6yCifwE 9HU+bY2IaF3LMMgTxvRVyT8yeu65YtA6FbZjnYW6Y0ZeVlQLFvn+830b4L4fWlt3 waTPrdRQcvexseaLFmxuZY2igfMRPtzyf3UXQaomDkitd4jC0WhH+Tg6OoTD88Fa IFTp1pvu+xmgjw4= =1qOu -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./bcftools_1.21-1.dsc: unsupported subcommand dpkg-source: info: extracting bcftools in /<> dpkg-source: info: unpacking bcftools_1.21.orig.tar.gz dpkg-source: info: unpacking bcftools_1.21-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_new_test_failing_on_32bit.patch dpkg-source: info: applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.kGjsFJsQbD/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-a3e66926-8666-42cc-9499-43aba2b98acf SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package bcftools dpkg-buildpackage: info: source version 1.21-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean rm -f config.mk && touch config.mk dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 distclean make[2]: Entering directory '/<>' rm -f test/*.o test/*.fa.fai test/*~ test/test-rbuf test/test-regidx rm -f test/*.unsorted.hex test/*.unsorted.tsv rm -f plugins/*.so plugins/*.P rm -rf plugins/*.dSYM rm -f gmon.out *.o *.a *~ bcftools version.h rm -rf *.dSYM test/*.dSYM rm -f config.cache config.h config.log config.mk config.status rm -rf autom4te.cache rm -f TAGS make[2]: Leaving directory '/<>' rm -f test/mpileup/indel-AD.1.out.new test/view-t.1.out.new test/view-t.2.out.new make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a debian/rules override_dh_autoreconf make[1]: Entering directory '/<>' rm -f config.mk && touch config.mk export MAKEFLAGS="-s"; dh_autoreconf configure.ac:94: warning: _AC_CONFIG_SUBDIRS: you should use literals ./lib/autoconf/status.m4:1096: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:94: the top level make[1]: Leaving directory '/<>' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- \ --with-htslib=system \ --enable-gsl \ --with-cblas=gslcblas \ --with-bcf-plugin-dir=/usr/lib/s390x-linux-gnu/bcftools ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=s390x-linux-gnu --with-htslib=system --enable-gsl --with-cblas=gslcblas --with-bcf-plugin-dir=/usr/lib/s390x-linux-gnu/bcftools checking for s390x-linux-gnu-gcc... s390x-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether s390x-linux-gnu-gcc accepts -g... yes checking for s390x-linux-gnu-gcc option to enable C11 features... none needed checking for grep that handles long lines and -e... /usr/bin/grep checking for C compiler warning flags... -Wall checking for s390x-linux-gnu-gcc option to enable large file support... none needed checking for htslib/sam.h... yes checking for hts_version in -lhts... yes checking shared library type... plain .so checking for library containing dlopen... none required checking if the compiler accepts -rdynamic... yes checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating config.h make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' echo '#define BCFTOOLS_VERSION "1.21"' > version.h s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o main.o main.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfindex.o vcfindex.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tabix.o tabix.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfstats.o vcfstats.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfisec.o vcfisec.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfmerge.o vcfmerge.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfquery.o vcfquery.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcffilter.o vcffilter.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o filter.o filter.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfsom.o vcfsom.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfnorm.o vcfnorm.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfgtcheck.o vcfgtcheck.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfview.o vcfview.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfannotate.o vcfannotate.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfroh.o vcfroh.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfconcat.o vcfconcat.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfcall.o vcfcall.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mcall.o mcall.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcmp.o vcmp.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gvcf.o gvcf.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o reheader.o reheader.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o convert.o convert.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfconvert.o vcfconvert.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tsv2vcf.o tsv2vcf.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfcnv.o vcfcnv.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfhead.o vcfhead.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o HMM.o HMM.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o consensus.o consensus.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ploidy.o ploidy.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bin.o bin.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hclust.o hclust.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o version.o version.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o regidx.o regidx.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o smpl_ilist.o smpl_ilist.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o csq.o csq.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfbuf.o vcfbuf.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpileup.o mpileup.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf.o bam2bcf.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf_indel.o bam2bcf_indel.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf_iaux.o bam2bcf_iaux.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf_edlib.o bam2bcf_edlib.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_consensus.o read_consensus.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_sample.o bam_sample.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfsort.o vcfsort.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cols.o cols.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o extsort.o extsort.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dist.o dist.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abuf.o abuf.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ccall.o ccall.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o em.o em.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prob1.o prob1.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmin.o kmin.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o str_finder.o str_finder.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gff.o gff.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o edlib.o edlib.c s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -DPLUGINPATH='"/usr/lib/s390x-linux-gnu/bcftools"' -c -o vcfplugin.o vcfplugin.c s390x-linux-gnu-gcc -rdynamic -Wl,-z,relro -Wl,-z,now -o bcftools main.o vcfindex.o tabix.o vcfstats.o vcfisec.o vcfmerge.o vcfquery.o vcffilter.o filter.o vcfsom.o vcfnorm.o vcfgtcheck.o vcfview.o vcfannotate.o vcfroh.o vcfconcat.o vcfcall.o mcall.o vcmp.o gvcf.o reheader.o convert.o vcfconvert.o tsv2vcf.o vcfcnv.o vcfhead.o HMM.o consensus.o ploidy.o bin.o hclust.o version.o regidx.o smpl_ilist.o csq.o vcfbuf.o mpileup.o bam2bcf.o bam2bcf_indel.o bam2bcf_iaux.o bam2bcf_edlib.o read_consensus.o bam_sample.o vcfsort.o cols.o extsort.o dist.o abuf.o ccall.o em.o prob1.o kmin.o str_finder.o gff.o edlib.o vcfplugin.o -lhts -lm -lz -lpthread s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-rbuf.o test/test-rbuf.c s390x-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o test/test-rbuf test/test-rbuf.o -lz s390x-linux-gnu-gcc -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-regidx.o test/test-regidx.c s390x-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -o test/test-regidx test/test-regidx.o regidx.o -lhts -lpthread -lz s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/GTisec.so version.c plugins/GTisec.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/GTsubset.so version.c plugins/GTsubset.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/ad-bias.so convert.c version.c plugins/ad-bias.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/add-variantkey.so version.c plugins/add-variantkey.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/af-dist.so bin.c version.c plugins/af-dist.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/allele-length.so version.c plugins/allele-length.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/check-ploidy.so version.c plugins/check-ploidy.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/check-sparsity.so version.c plugins/check-sparsity.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/color-chrs.so HMM.c version.c plugins/color-chrs.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/contrast.so version.c plugins/contrast.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/counts.so version.c plugins/counts.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/dosage.so version.c plugins/dosage.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/fill-AN-AC.so version.c plugins/fill-AN-AC.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/fill-from-fasta.so filter.c version.c plugins/fill-from-fasta.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/fill-tags.so version.c plugins/fill-tags.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/fixploidy.so ploidy.c regidx.c version.c plugins/fixploidy.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/fixref.so version.c plugins/fixref.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/frameshifts.so version.c plugins/frameshifts.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/guess-ploidy.so version.c plugins/guess-ploidy.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/gvcfz.so version.c plugins/gvcfz.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/impute-info.so version.c plugins/impute-info.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/indel-stats.so version.c plugins/indel-stats.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/isecGT.so smpl_ilist.c version.c plugins/isecGT.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/mendelian2.so version.c plugins/mendelian2.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/missing2ref.so version.c plugins/missing2ref.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/parental-origin.so version.c plugins/parental-origin.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/prune.so version.c plugins/prune.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/remove-overlaps.so version.c plugins/remove-overlaps.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/scatter.so version.c plugins/scatter.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/setGT.so version.c plugins/setGT.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/smpl-stats.so version.c plugins/smpl-stats.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/split-vep.so version.c plugins/split-vep.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/split.so version.c plugins/split.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/tag2tag.so version.c plugins/tag2tag.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/trio-dnm2.so version.c plugins/trio-dnm2.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/trio-stats.so version.c plugins/trio-stats.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/trio-switch-rate.so version.c plugins/trio-switch-rate.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/variant-distance.so version.c plugins/variant-distance.c s390x-linux-gnu-gcc -fPIC -shared -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o plugins/variantkey-hex.so version.c plugins/variantkey-hex.c make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/bcftools/ -a make -j1 install DESTDIR=/<>/debian/bcftools AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' mkdir -p -m 755 /<>/debian/bcftools/usr/bin /<>/debian/bcftools/usr/share/man/man1 /<>/debian/bcftools/usr/lib/s390x-linux-gnu/bcftools install -p bcftools /<>/debian/bcftools/usr/bin install -p misc/color-chrs.pl misc/gff2gff.py misc/guess-ploidy.py misc/plot-vcfstats misc/plot-roh.py misc/run-roh.pl misc/vcfutils.pl /<>/debian/bcftools/usr/bin install -p -m 644 doc/bcftools.1 /<>/debian/bcftools/usr/share/man/man1 install -p plugins/*.so /<>/debian/bcftools/usr/lib/s390x-linux-gnu/bcftools make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # Fix Perl interpreter PATH for pscript in `grep -Rl '#!/usr/bin/env \+perl' debian/*` ; do \ sed -i '1s?#!/usr/bin/env \+perl?#!/usr/bin/perl?' ${pscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory '/<>' dh_installman --language=C make[1]: Leaving directory '/<>' dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package bcftools: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package bcftools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'bcftools' in '../bcftools_1.21-1_s390x.deb'. dpkg-deb: building package 'bcftools-dbgsym' in '../bcftools-dbgsym_1.21-1_s390x.deb'. dpkg-genbuildinfo --build=any -O../bcftools_1.21-1_s390x.buildinfo dpkg-genchanges --build=any -O../bcftools_1.21-1_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-02-17T07:45:06Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ -------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bcftools_1.21-1_s390x.changes: ------------------------------ Format: 1.8 Date: Thu, 13 Feb 2025 21:42:57 +0100 Source: bcftools Binary: bcftools bcftools-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 1.21-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: bcftools - genomic variant calling and manipulation of VCF/BCF files Changes: bcftools (1.21-1) unstable; urgency=medium . * New upstream version 1.21 * d/copyright: update copyright year. * skip_new_test_failing_on_32bit.patch: unfuzz. * tests-pluginpath.patch: delete: hunk inhibited upstream. * d/patches/*: normalise Last-Update timestamp. * d/rules: activate hardening. 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+------------------------------------------------------------------------------+ Format: 1.0 Source: bcftools Binary: bcftools bcftools-dbgsym Architecture: s390x Version: 1.21-1 Checksums-Md5: cbaa973734bf339d25b83009c34969f3 2213596 bcftools-dbgsym_1.21-1_s390x.deb ce26c06c0563720418c40473d2cd9ada 804372 bcftools_1.21-1_s390x.deb Checksums-Sha1: c1b71f06b149ba2e64e3d2bec349f7e584c48974 2213596 bcftools-dbgsym_1.21-1_s390x.deb af9271e8112139fce48a6550c41df36f9f69f940 804372 bcftools_1.21-1_s390x.deb Checksums-Sha256: 2b8b8f6ceb15f18a5aceccf23fcb11b6970fa1c6098d278be18ce76d9b2ff586 2213596 bcftools-dbgsym_1.21-1_s390x.deb 9d2d733c80df737ff17971a46c461e22e2b358e3cf3f6aecf969b7e1cbbd7a3e 804372 bcftools_1.21-1_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 17 Feb 2025 07:45:05 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.17-3), autopoint (= 0.23.1-1), autotools-dev (= 20220109.1), base-files (= 13.6), base-passwd (= 3.6.6), bash (= 5.2.37-1), binutils (= 2.44-1), binutils-common (= 2.44-1), binutils-x86-64-linux-gnu (= 2.44-1), bsdextrautils (= 2.40.4-3), bsdutils (= 1:2.40.4-3), build-essential (= 12.12), bzip2 (= 1.0.8-6), comerr-dev (= 2.1-1.47.2-1), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-17), cpp-14-x86-64-linux-gnu (= 14.2.0-17), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.89), debhelper (= 13.24.1), debianutils (= 5.21), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-2), dpkg (= 1.22.15), dpkg-dev (= 1.22.15), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-17), g++-14-x86-64-linux-gnu (= 14.2.0-17), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-17), gcc-14-base (= 14.2.0-17), gcc-14-x86-64-linux-gnu (= 14.2.0-17), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), grep (= 3.11-4), groff-base (= 1.23.0-7), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-4), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-17), libatomic1 (= 14.2.0-17), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b1), libbinutils (= 2.44-1), libblkid1 (= 2.40.4-3), libbrotli-dev (= 1.1.0-2+b6), libbrotli1 (= 1.1.0-2+b6), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.40-7), libc-dev-bin (= 2.40-7), libc6 (= 2.40-7), libc6-dev (= 2.40-7), libcap-ng0 (= 0.8.5-4), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-17), libcom-err2 (= 1.47.2-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-1), libctf0 (= 2.44-1), libcurl3t64-gnutls (= 8.12.1-2), libcurl4-gnutls-dev (= 8.12.1-2), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.277), libdebhelper-perl (= 13.24.1), libdeflate-dev (= 1.23-1+b1), libdeflate0 (= 1.23-1+b1), libdpkg-perl (= 1.22.15), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libffi8 (= 3.4.7-1), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.2.0-17), libgcc-s1 (= 14.2.0-17), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-17), libgprofng0 (= 2.44-1), libgsl-dev (= 2.8+dfsg-5), libgsl28 (= 2.8+dfsg-5), libgslcblas0 (= 2.8+dfsg-5), libgssapi-krb5-2 (= 1.21.3-4), libgssrpc4t64 (= 1.21.3-4), libhogweed6t64 (= 3.10.1-1), libhts-dev (= 1.21+ds-1), libhts3t64 (= 1.21+ds-1), libhtscodecs2 (= 1.6.1-2), libhwasan0 (= 14.2.0-17), libicu72 (= 72.1-6), libidn2-0 (= 2.3.7-2+b1), libidn2-dev (= 2.3.7-2+b1), libisl23 (= 0.27-1), libitm1 (= 14.2.0-17), libjansson4 (= 2.14-2+b3), libk5crypto3 (= 1.21.3-4), libkadm5clnt-mit12 (= 1.21.3-4), libkadm5srv-mit12 (= 1.21.3-4), libkdb5-10t64 (= 1.21.3-4), libkeyutils1 (= 1.6.3-4), libkrb5-3 (= 1.21.3-4), libkrb5-dev (= 1.21.3-4), libkrb5support0 (= 1.21.3-4), libldap-dev (= 2.6.9+dfsg-1), libldap2 (= 2.6.9+dfsg-1), liblsan0 (= 14.2.0-17), liblzma-dev (= 5.6.3-1+b1), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.40.4-3), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1), libnghttp2-dev (= 1.64.0-1), libnghttp3-9 (= 1.6.0-2), libnghttp3-dev (= 1.6.0-2), libngtcp2-16 (= 1.9.1-1), libngtcp2-crypto-gnutls-dev (= 1.9.1-1), libngtcp2-crypto-gnutls8 (= 1.9.1-1), libngtcp2-dev (= 1.9.1-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam0g (= 1.7.0-3), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-2), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libquadmath0 (= 14.2.0-17), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-8+b1), libsasl2-modules-db (= 2.1.28+dfsg1-8+b1), libseccomp2 (= 2.5.5-2), libselinux1 (= 3.8-3), libsframe1 (= 2.44-1), libsmartcols1 (= 2.40.4-3), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.4.1-1), libssl3t64 (= 3.4.1-1), libstdc++-14-dev (= 14.2.0-17), libstdc++6 (= 14.2.0-17), libsystemd0 (= 257.3-1), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtinfo6 (= 6.5+20250125-2), libtool (= 2.5.4-3), libtsan2 (= 14.2.0-17), libubsan1 (= 14.2.0-17), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.3-1), libunbound8 (= 1.22.0-1+b1), libunistring5 (= 1.3-1), libuuid1 (= 2.40.4-3), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libzstd-dev (= 1.5.6+dfsg-2), libzstd1 (= 1.5.6+dfsg-2), linux-libc-dev (= 6.12.13-1), m4 (= 1.4.19-5), make (= 4.4.1-1), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250125-2), ncurses-bin (= 6.5+20250125-2), nettle-dev (= 3.10.1-1), openssl-provider-legacy (= 3.4.1-1), patch (= 2.7.6-7), perl (= 5.40.1-2), perl-base (= 5.40.1-2), perl-modules-5.40 (= 5.40.1-2), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.14-1), tar (= 1.35+dfsg-3.1), util-linux (= 2.40.4-3), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1739479377" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ bcftools-dbgsym_1.21-1_s390x.deb 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./usr/lib/debug/.build-id/f8/c516c443558bed4924d6164cb4bd18dff23767.debug drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 23072 2025-02-13 20:42 ./usr/lib/debug/.dwz/s390x-linux-gnu/bcftools.debug drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/ drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-02-13 20:42 ./usr/share/doc/bcftools-dbgsym -> bcftools bcftools_1.21-1_s390x.deb ------------------------- new Debian package, version 2.0. size 804372 bytes: control archive=2264 bytes. 701 bytes, 15 lines control 4144 bytes, 55 lines md5sums Package: bcftools Version: 1.21-1 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 2765 Depends: libc6 (>= 2.34), libhts3t64 (>= 1.17) Recommends: perl, python3-gffutils, python3-matplotlib Suggests: python3, python3-numpy, texlive-latex-recommended Section: science Priority: optional Homepage: https://samtools.github.io/bcftools/ Description: genomic variant calling and manipulation of VCF/BCF files BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. 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./usr/share/doc/bcftools/copyright drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 119 2025-02-13 20:42 ./usr/share/lintian/overrides/bcftools drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/man/ drwxr-xr-x root/root 0 2025-02-13 20:42 ./usr/share/man/man1/ -rw-r--r-- root/root 51040 2025-02-13 20:42 ./usr/share/man/man1/bcftools.1.gz -rw-r--r-- root/root 253 2025-02-13 20:42 ./usr/share/man/man1/color-chrs.pl.1.gz -rw-r--r-- root/root 271 2025-02-13 20:42 ./usr/share/man/man1/plot-vcfstats.1.gz -rw-r--r-- root/root 208 2025-02-13 20:42 ./usr/share/man/man1/vcfutils.pl.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1412 B] Get:5 copy:/<>/apt_archive ./ Packages [1446 B] Fetched 3473 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... /usr/lib/apt/solvers/apt: /lib/x86_64-linux-gnu/libapt-private.so.0.0: no version information available (required by /usr/lib/apt/solvers/apt) The solver encountered an error of type: ERR_UNSOLVABLE The following information might help you to understand what is wrong: Unsatisfied dependencies: Execute external solver... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: sbuild-build-depends-lintian-dummy:s390x : Depends: lintian:amd64 E: External solver failed with: Unsatisfied dependencies: apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 87 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 13 Job: bcftools_1.21-1 Lintian: error Machine Architecture: amd64 Package: bcftools Package-Time: 112 Source-Version: 1.21-1 Space: n/a Status: successful Version: 1.21-1 -------------------------------------------------------------------------------- Finished at 2025-02-17T07:45:06Z Build needed 00:01:52, no disk space