sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | bifrost 1.3.1-1 (i386) Sat, 10 Feb 2024 09:33:55 +0000 | +==============================================================================+ Package: bifrost Version: 1.3.1-1 Source Version: 1.3.1-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.K6eAjEIyME... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/bifrost-lqQRTK/resolver-kz4iM9' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [198 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.4 MB] Get:3 http://mirror.einval.org/debian unstable/main i386 Packages [9564 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9604 kB] Fetched 29.8 MB in 8s (3962 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libcap-ng0 libcap2 libgdbm-compat4 libgdbm6 libgmp10 libkeyutils1 linux-libc-dev 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2953 kB of archives. After this operation, 21.5 kB of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 libcap-ng0 arm64 0.8.4-2 [16.3 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 libcap2 arm64 1:2.66-5 [26.7 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-2+b1 [533 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libgdbm6 arm64 1.23-5+b1 [71.6 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libgdbm-compat4 arm64 1.23-5+b1 [48.4 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get:7 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 6.6.15-2 [2247 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2953 kB in 0s (51.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12113 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.4-2_arm64.deb ... Unpacking libcap-ng0:arm64 (0.8.4-2) over (0.8.4-1) ... Setting up libcap-ng0:arm64 (0.8.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12113 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.66-5_arm64.deb ... Unpacking libcap2:arm64 (1:2.66-5) over (1:2.66-4+b2) ... Setting up libcap2:arm64 (1:2.66-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12112 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.3.0+dfsg-2+b1_arm64.deb ... Unpacking libgmp10:arm64 (2:6.3.0+dfsg-2+b1) over (2:6.3.0+dfsg-2) ... Setting up libgmp10:arm64 (2:6.3.0+dfsg-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12113 files and directories currently installed.) Preparing to unpack .../libgdbm6_1.23-5+b1_arm64.deb ... Unpacking libgdbm6:arm64 (1.23-5+b1) over (1.23-5) ... Preparing to unpack .../libgdbm-compat4_1.23-5+b1_arm64.deb ... Unpacking libgdbm-compat4:arm64 (1.23-5+b1) over (1.23-5) ... Preparing to unpack .../libkeyutils1_1.6.3-3_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-3) over (1.6.3-2+b2) ... Preparing to unpack .../linux-libc-dev_6.6.15-2_all.deb ... Unpacking linux-libc-dev (6.6.15-2) over (6.6.13-1) ... Setting up libkeyutils1:arm64 (1.6.3-3) ... Setting up linux-libc-dev (6.6.15-2) ... Setting up libgdbm6:arm64 (1.23-5+b1) ... Setting up libgdbm-compat4:arm64 (1.23-5+b1) ... Processing triggers for libc-bin (2.37-15) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'bifrost' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/bifrost.git Please use: git clone https://salsa.debian.org/med-team/bifrost.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 605 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main bifrost 1.3.1-1 (dsc) [2099 B] Get:2 http://mirror.einval.org/debian unstable/main bifrost 1.3.1-1 (tar) [350 kB] Get:3 http://mirror.einval.org/debian unstable/main bifrost 1.3.1-1 (diff) [253 kB] Fetched 605 kB in 0s (2153 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/bifrost-lqQRTK/bifrost-1.3.1' with '<>' I: NOTICE: Log filtering will replace 'build/bifrost-lqQRTK' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [740 B] Get:5 copy:/<>/apt_archive ./ Packages [782 B] Fetched 2131 B in 0s (122 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cmake cmake-data cpp-13-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-i686-linux-gnu g++-i686-linux-gnu gcc-13-base:i386 gcc-13-cross-base gcc-13-i686-linux-gnu gcc-13-i686-linux-gnu-base gcc-14-base:i386 gcc-14-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:i386 libgcc-13-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu72 libio-string-perl libitm1:i386 libitm1-i386-cross libjsoncpp25 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1 libncursesw6 libnghttp2-14 libnsl-dev:i386 libnsl2:i386 libpipeline1 libproc2-0 libpsl5 libquadmath0:i386 libquadmath0-i386-cross librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:i386 libstdc++-13-dev:i386 libstdc++-13-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-i386-cross m4 man-db po-debconf procps sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode ninja-build gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 krb5-doc:i386 krb5-user:i386 libstdc++-13-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:i386 ca-certificates libarchive-cpio-perl krb5-locales:i386 libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cmake cmake-data cpp-13-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-i686-linux-gnu g++-i686-linux-gnu gcc-13-base:i386 gcc-13-cross-base gcc-13-i686-linux-gnu gcc-13-i686-linux-gnu-base gcc-14-base:i386 gcc-14-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:i386 libgcc-13-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu72 libio-string-perl libitm1:i386 libitm1-i386-cross libjsoncpp25 libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1 libncursesw6 libnghttp2-14 libnsl-dev:i386 libnsl2:i386 libpipeline1 libproc2-0 libpsl5 libquadmath0:i386 libquadmath0-i386-cross librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:i386 libstdc++-13-dev:i386 libstdc++-13-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-i386-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 122 newly installed, 0 to remove and 0 not upgraded. Need to get 107 MB of archives. After this operation, 423 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-6+b1 [15.0 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.4+20240113-1 [124 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-4 [61.7 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.4-4 [869 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-2+b1 [314 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libmagic1 arm64 1:5.45-2+b1 [100 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-2+b1 [43.2 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-3 [1127 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.39.3-6 [90.0 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-1+b2 [36.7 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.12.0-3 [1385 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-4 [9223 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b2 [624 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libarchive13 arm64 3.7.2-1 [319 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-4+b1 [20.2 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-4+b1 [55.5 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5+b3 [172 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libnghttp2-14 arm64 1.59.0-1 [70.2 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libpsl5 arm64 0.21.2-1+b1 [59.0 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libssh2-1 arm64 1.11.0-4 [206 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libcurl4 arm64 8.6.0-2 [403 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libexpat1 arm64 2.6.0-1 [87.6 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libjsoncpp25 arm64 1.9.5-6+b2 [73.2 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 librhash0 arm64 1.4.3-3 [131 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libuv1 arm64 1.46.0-3 [138 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 cmake-data all 3.28.3-1 [2128 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 cmake arm64 3.28.3-1 [8892 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 gcc-13-i686-linux-gnu-base arm64 13.2.0-12cross1 [42.6 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 cpp-13-i686-linux-gnu arm64 13.2.0-12cross1 [9276 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 cpp-i686-linux-gnu arm64 4:13.2.0-7 [4720 B] Get:43 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 binutils-i686-linux-gnu arm64 2.42-2 [2381 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libc6-i386-cross all 2.37-12cross1 [1339 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-i386-cross all 14-20240127-1cross1 [69.3 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libgomp1-i386-cross all 14-20240127-1cross1 [135 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libitm1-i386-cross all 14-20240127-1cross1 [26.7 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libatomic1-i386-cross all 14-20240127-1cross1 [7280 B] Get:52 http://mirror.einval.org/debian unstable/main arm64 libasan8-i386-cross all 14-20240127-1cross1 [2602 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-i386-cross all 14-20240127-1cross1 [719 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libubsan1-i386-cross all 14-20240127-1cross1 [1050 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-i386-cross all 14-20240127-1cross1 [233 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libgcc-13-dev-i386-cross all 13.2.0-12cross1 [2497 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 gcc-13-i686-linux-gnu arm64 13.2.0-12cross1 [17.8 MB] Get:58 http://mirror.einval.org/debian unstable/main arm64 gcc-i686-linux-gnu arm64 4:13.2.0-7 [1444 B] Get:59 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-i386-cross all 6.5.8-1cross1 [2014 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-i386-cross all 2.37-12cross1 [1716 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libstdc++-13-dev-i386-cross all 13.2.0-12cross1 [2276 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 g++-13-i686-linux-gnu arm64 13.2.0-12cross1 [10.1 MB] Get:63 http://mirror.einval.org/debian unstable/main arm64 g++-i686-linux-gnu arm64 4:13.2.0-7 [1196 B] Get:64 http://mirror.einval.org/debian unstable/main arm64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b2 [299 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.31-1 [64.8 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-i386 all 12.10 [3480 B] Get:78 http://mirror.einval.org/debian unstable/main arm64 d-shlibs all 0.106 [10.9 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.13 [85.0 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:86 http://mirror.einval.org/debian unstable/main arm64 libelf1 arm64 0.190-1+b1 [175 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1 [101 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.13 [889 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.33-1 [28.3 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.33-1 [73.5 kB] Get:94 http://mirror.einval.org/debian unstable/main i386 gcc-13-base i386 13.2.0-13 [42.6 kB] Get:95 http://mirror.einval.org/debian unstable/main i386 gcc-14-base i386 14-20240201-3 [42.3 kB] Get:96 http://mirror.einval.org/debian unstable/main i386 libgcc-s1 i386 14-20240201-3 [69.2 kB] Get:97 http://mirror.einval.org/debian unstable/main i386 libc6 i386 2.37-15 [2625 kB] Get:98 http://mirror.einval.org/debian unstable/main i386 libasan8 i386 14-20240201-3 [2608 kB] Get:99 http://mirror.einval.org/debian unstable/main i386 libatomic1 i386 14-20240201-3 [7556 B] Get:100 http://mirror.einval.org/debian unstable/main i386 libcrypt1 i386 1:4.4.36-4 [95.7 kB] Get:101 http://mirror.einval.org/debian unstable/main i386 libcrypt-dev i386 1:4.4.36-4 [125 kB] Get:102 http://mirror.einval.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-5 [35.6 kB] Get:103 http://mirror.einval.org/debian unstable/main i386 libcom-err2 i386 1.47.0-2+b1 [20.4 kB] Get:104 http://mirror.einval.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-5 [82.6 kB] Get:105 http://mirror.einval.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get:106 http://mirror.einval.org/debian unstable/main i386 libssl3 i386 3.1.5-1 [2034 kB] Get:107 http://mirror.einval.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-5 [359 kB] Get:108 http://mirror.einval.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-5 [144 kB] Get:109 http://mirror.einval.org/debian unstable/main i386 libtirpc3 i386 1.3.4+ds-1 [89.5 kB] Get:110 http://mirror.einval.org/debian unstable/main i386 libnsl2 i386 1.3.0-3 [42.1 kB] Get:111 http://mirror.einval.org/debian unstable/main i386 libtirpc-dev i386 1.3.4+ds-1 [199 kB] Get:112 http://mirror.einval.org/debian unstable/main i386 libnsl-dev i386 1.3.0-3 [70.4 kB] Get:113 http://mirror.einval.org/debian unstable/main i386 libc6-dev i386 2.37-15 [1721 kB] Get:114 http://mirror.einval.org/debian unstable/main i386 libgomp1 i386 14-20240201-3 [138 kB] Get:115 http://mirror.einval.org/debian unstable/main i386 libitm1 i386 14-20240201-3 [27.2 kB] Get:116 http://mirror.einval.org/debian unstable/main i386 libstdc++6 i386 14-20240201-3 [766 kB] Get:117 http://mirror.einval.org/debian unstable/main i386 libubsan1 i386 14-20240201-3 [1050 kB] Get:118 http://mirror.einval.org/debian unstable/main i386 libquadmath0 i386 14-20240201-3 [233 kB] Get:119 http://mirror.einval.org/debian unstable/main i386 libgcc-13-dev i386 13.2.0-13 [2500 kB] Get:120 http://mirror.einval.org/debian unstable/main i386 libstdc++-13-dev i386 13.2.0-13 [2270 kB] Get:121 http://mirror.einval.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg-3+b1 [83.8 kB] Get:122 http://mirror.einval.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3+b1 [915 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 107 MB in 1s (86.5 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12114 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-6+b1) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../001-libncursesw6_6.4+20240113-1_arm64.deb ... Unpacking libncursesw6:arm64 (6.4+20240113-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-4_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-4_arm64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-2+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../006-libmagic1_1%3a5.45-2+b1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.45-2+b1_arm64.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../009-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.23.0-3_arm64.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.39.3-6_arm64.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../012-libpipeline1_1.5.7-1+b2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1+b2) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.12.0-3_arm64.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../020-libicu72_72.1-4_arm64.deb ... Unpacking libicu72:arm64 (72.1-4) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../021-libxml2_2.9.14+dfsg-1.3+b2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../022-libarchive13_3.7.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.7.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../023-libbrotli1_1.1.0-2+b3_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../024-libsasl2-modules-db_2.1.28+dfsg1-4+b1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../025-libsasl2-2_2.1.28+dfsg1-4+b1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../026-libldap-2.5-0_2.5.13+dfsg-5+b3_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5+b3) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../027-libnghttp2-14_1.59.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.59.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../028-libpsl5_0.21.2-1+b1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../029-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../030-libssh2-1_1.11.0-4_arm64.deb ... Unpacking libssh2-1:arm64 (1.11.0-4) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../031-libcurl4_8.6.0-2_arm64.deb ... Unpacking libcurl4:arm64 (8.6.0-2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../032-libexpat1_2.6.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.0-1) ... Selecting previously unselected package libjsoncpp25:arm64. Preparing to unpack .../033-libjsoncpp25_1.9.5-6+b2_arm64.deb ... Unpacking libjsoncpp25:arm64 (1.9.5-6+b2) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../034-librhash0_1.4.3-3_arm64.deb ... Unpacking librhash0:arm64 (1.4.3-3) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../035-libuv1_1.46.0-3_arm64.deb ... Unpacking libuv1:arm64 (1.46.0-3) ... Selecting previously unselected package cmake-data. Preparing to unpack .../036-cmake-data_3.28.3-1_all.deb ... Unpacking cmake-data (3.28.3-1) ... Selecting previously unselected package cmake. Preparing to unpack .../037-cmake_3.28.3-1_arm64.deb ... Unpacking cmake (3.28.3-1) ... Selecting previously unselected package gcc-13-i686-linux-gnu-base:arm64. Preparing to unpack .../038-gcc-13-i686-linux-gnu-base_13.2.0-12cross1_arm64.deb ... Unpacking gcc-13-i686-linux-gnu-base:arm64 (13.2.0-12cross1) ... Selecting previously unselected package cpp-13-i686-linux-gnu. Preparing to unpack .../039-cpp-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking cpp-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package cpp-i686-linux-gnu. Preparing to unpack .../040-cpp-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking cpp-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package cross-config. Preparing to unpack .../041-cross-config_2.6.20_all.deb ... Unpacking cross-config (2.6.20) ... Selecting previously unselected package binutils-i686-linux-gnu. Preparing to unpack .../042-binutils-i686-linux-gnu_2.42-2_arm64.deb ... Unpacking binutils-i686-linux-gnu (2.42-2) ... Selecting previously unselected package gcc-13-cross-base. Preparing to unpack .../043-gcc-13-cross-base_13.2.0-12cross1_all.deb ... Unpacking gcc-13-cross-base (13.2.0-12cross1) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../044-gcc-14-cross-base_14-20240127-1cross1_all.deb ... Unpacking gcc-14-cross-base (14-20240127-1cross1) ... Selecting previously unselected package libc6-i386-cross. Preparing to unpack .../045-libc6-i386-cross_2.37-12cross1_all.deb ... Unpacking libc6-i386-cross (2.37-12cross1) ... Selecting previously unselected package libgcc-s1-i386-cross. Preparing to unpack .../046-libgcc-s1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libgcc-s1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libgomp1-i386-cross. Preparing to unpack .../047-libgomp1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libgomp1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libitm1-i386-cross. Preparing to unpack .../048-libitm1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libitm1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libatomic1-i386-cross. Preparing to unpack .../049-libatomic1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libatomic1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libasan8-i386-cross. Preparing to unpack .../050-libasan8-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libasan8-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libstdc++6-i386-cross. Preparing to unpack .../051-libstdc++6-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libstdc++6-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libubsan1-i386-cross. Preparing to unpack .../052-libubsan1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libubsan1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libquadmath0-i386-cross. Preparing to unpack .../053-libquadmath0-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libquadmath0-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libgcc-13-dev-i386-cross. Preparing to unpack .../054-libgcc-13-dev-i386-cross_13.2.0-12cross1_all.deb ... Unpacking libgcc-13-dev-i386-cross (13.2.0-12cross1) ... Selecting previously unselected package gcc-13-i686-linux-gnu. Preparing to unpack .../055-gcc-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking gcc-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package gcc-i686-linux-gnu. Preparing to unpack .../056-gcc-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking gcc-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package linux-libc-dev-i386-cross. Preparing to unpack .../057-linux-libc-dev-i386-cross_6.5.8-1cross1_all.deb ... Unpacking linux-libc-dev-i386-cross (6.5.8-1cross1) ... Selecting previously unselected package libc6-dev-i386-cross. Preparing to unpack .../058-libc6-dev-i386-cross_2.37-12cross1_all.deb ... Unpacking libc6-dev-i386-cross (2.37-12cross1) ... Selecting previously unselected package libstdc++-13-dev-i386-cross. Preparing to unpack .../059-libstdc++-13-dev-i386-cross_13.2.0-12cross1_all.deb ... Unpacking libstdc++-13-dev-i386-cross (13.2.0-12cross1) ... Selecting previously unselected package g++-13-i686-linux-gnu. Preparing to unpack .../060-g++-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking g++-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package g++-i686-linux-gnu. Preparing to unpack .../061-g++-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking g++-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../062-libconfig-inifiles-perl_3.000003-2_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-2) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../063-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../064-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../065-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../066-libxml-sax-perl_1.02+dfsg-3_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-3) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../067-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b2_arm64.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../068-libxml-simple-perl_2.25-2_all.deb ... Unpacking libxml-simple-perl (2.25-2) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../069-libyaml-perl_1.31-1_all.deb ... Unpacking libyaml-perl (1.31-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../070-libconfig-auto-perl_0.44-2_all.deb ... Unpacking libconfig-auto-perl (0.44-2) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../071-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../072-libfile-homedir-perl_1.006-2_all.deb ... Unpacking libfile-homedir-perl (1.006-2) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../073-libdebian-dpkgcross-perl_2.6.20_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.20) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../074-dpkg-cross_2.6.20_all.deb ... Unpacking dpkg-cross (2.6.20) ... Selecting previously unselected package crossbuild-essential-i386. Preparing to unpack .../075-crossbuild-essential-i386_12.10_all.deb ... Unpacking crossbuild-essential-i386 (12.10) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../076-d-shlibs_0.106_all.deb ... Unpacking d-shlibs (0.106) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../077-libdebhelper-perl_13.13_all.deb ... Unpacking libdebhelper-perl (13.13) ... Selecting previously unselected package libtool. Preparing to unpack .../078-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../079-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../080-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../081-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../082-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../083-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../084-libelf1_0.190-1+b1_arm64.deb ... Unpacking libelf1:arm64 (0.190-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../085-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package gettext. Preparing to unpack .../086-gettext_0.21-14+b1_arm64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../087-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../088-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../089-debhelper_13.13_all.deb ... Unpacking debhelper (13.13) ... Selecting previously unselected package libfakeroot:arm64. Preparing to unpack .../090-libfakeroot_1.33-1_arm64.deb ... Unpacking libfakeroot:arm64 (1.33-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../091-fakeroot_1.33-1_arm64.deb ... Unpacking fakeroot (1.33-1) ... Selecting previously unselected package gcc-13-base:i386. Preparing to unpack .../092-gcc-13-base_13.2.0-13_i386.deb ... Unpacking gcc-13-base:i386 (13.2.0-13) ... Selecting previously unselected package gcc-14-base:i386. Preparing to unpack .../093-gcc-14-base_14-20240201-3_i386.deb ... Unpacking gcc-14-base:i386 (14-20240201-3) ... Selecting previously unselected package libgcc-s1:i386. Preparing to unpack .../094-libgcc-s1_14-20240201-3_i386.deb ... Unpacking libgcc-s1:i386 (14-20240201-3) ... Selecting previously unselected package libc6:i386. Preparing to unpack .../095-libc6_2.37-15_i386.deb ... Unpacking libc6:i386 (2.37-15) ... Selecting previously unselected package libasan8:i386. Preparing to unpack .../096-libasan8_14-20240201-3_i386.deb ... Unpacking libasan8:i386 (14-20240201-3) ... Selecting previously unselected package libatomic1:i386. Preparing to unpack .../097-libatomic1_14-20240201-3_i386.deb ... Unpacking libatomic1:i386 (14-20240201-3) ... Selecting previously unselected package libcrypt1:i386. Preparing to unpack .../098-libcrypt1_1%3a4.4.36-4_i386.deb ... Unpacking libcrypt1:i386 (1:4.4.36-4) ... Selecting previously unselected package libcrypt-dev:i386. Preparing to unpack .../099-libcrypt-dev_1%3a4.4.36-4_i386.deb ... Unpacking libcrypt-dev:i386 (1:4.4.36-4) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../100-libkrb5support0_1.20.1-5_i386.deb ... Unpacking libkrb5support0:i386 (1.20.1-5) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../101-libcom-err2_1.47.0-2+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.0-2+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../102-libk5crypto3_1.20.1-5_i386.deb ... Unpacking libk5crypto3:i386 (1.20.1-5) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../103-libkeyutils1_1.6.3-3_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-3) ... Selecting previously unselected package libssl3:i386. Preparing to unpack .../104-libssl3_3.1.5-1_i386.deb ... Unpacking libssl3:i386 (3.1.5-1) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../105-libkrb5-3_1.20.1-5_i386.deb ... Unpacking libkrb5-3:i386 (1.20.1-5) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../106-libgssapi-krb5-2_1.20.1-5_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.20.1-5) ... Selecting previously unselected package libtirpc3:i386. Preparing to unpack .../107-libtirpc3_1.3.4+ds-1_i386.deb ... Unpacking libtirpc3:i386 (1.3.4+ds-1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../108-libnsl2_1.3.0-3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3) ... Selecting previously unselected package libtirpc-dev:i386. Preparing to unpack .../109-libtirpc-dev_1.3.4+ds-1_i386.deb ... Unpacking libtirpc-dev:i386 (1.3.4+ds-1) ... Selecting previously unselected package libnsl-dev:i386. Preparing to unpack .../110-libnsl-dev_1.3.0-3_i386.deb ... Unpacking libnsl-dev:i386 (1.3.0-3) ... Selecting previously unselected package libc6-dev:i386. Preparing to unpack .../111-libc6-dev_2.37-15_i386.deb ... Unpacking libc6-dev:i386 (2.37-15) ... Selecting previously unselected package libgomp1:i386. Preparing to unpack .../112-libgomp1_14-20240201-3_i386.deb ... Unpacking libgomp1:i386 (14-20240201-3) ... Selecting previously unselected package libitm1:i386. Preparing to unpack .../113-libitm1_14-20240201-3_i386.deb ... Unpacking libitm1:i386 (14-20240201-3) ... Selecting previously unselected package libstdc++6:i386. Preparing to unpack .../114-libstdc++6_14-20240201-3_i386.deb ... Unpacking libstdc++6:i386 (14-20240201-3) ... Selecting previously unselected package libubsan1:i386. Preparing to unpack .../115-libubsan1_14-20240201-3_i386.deb ... Unpacking libubsan1:i386 (14-20240201-3) ... Selecting previously unselected package libquadmath0:i386. Preparing to unpack .../116-libquadmath0_14-20240201-3_i386.deb ... Unpacking libquadmath0:i386 (14-20240201-3) ... Selecting previously unselected package libgcc-13-dev:i386. Preparing to unpack .../117-libgcc-13-dev_13.2.0-13_i386.deb ... Unpacking libgcc-13-dev:i386 (13.2.0-13) ... Selecting previously unselected package libstdc++-13-dev:i386. Preparing to unpack .../118-libstdc++-13-dev_13.2.0-13_i386.deb ... Unpacking libstdc++-13-dev:i386 (13.2.0-13) ... Selecting previously unselected package zlib1g:i386. Preparing to unpack .../119-zlib1g_1%3a1.3.dfsg-3+b1_i386.deb ... Unpacking zlib1g:i386 (1:1.3.dfsg-3+b1) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../120-zlib1g-dev_1%3a1.3.dfsg-3+b1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.3.dfsg-3+b1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:i386. Preparing to unpack .../121-sbuild-build-depends-main-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libexpat1:arm64 (2.6.0-1) ... Setting up libpipeline1:arm64 (1.5.7-1+b2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libpsl5:arm64 (0.21.2-1+b1) ... Setting up libicu72:arm64 (72.1-4) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up gcc-14-base:i386 (14-20240201-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up binutils-i686-linux-gnu (2.42-2) ... Setting up libdebhelper-perl (13.13) ... Setting up libbrotli1:arm64 (1.1.0-2+b3) ... Setting up libnghttp2-14:arm64 (1.59.0-1) ... Setting up libmagic1:arm64 (1:5.45-2+b1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14-20240127-1cross1) ... Setting up file (1:5.45-2+b1) ... Setting up libyaml-perl (1.31-1) ... Setting up libfakeroot:arm64 (1.33-1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-4+b1) ... Setting up fakeroot (1.33-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up linux-libc-dev-i386-cross (6.5.8-1cross1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libuv1:arm64 (1.46.0-3) ... Setting up gcc-13-base:i386 (13.2.0-13) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up gcc-13-cross-base (13.2.0-12cross1) ... Setting up libproc2-0:arm64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:arm64 (1.9.5-6+b2) ... Setting up d-shlibs (0.106) ... Setting up libncursesw6:arm64 (6.4+20240113-1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-4+b1) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.22) ... Setting up librhash0:arm64 (1.4.3-3) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libc6-i386-cross (2.37-12cross1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libssh2-1:arm64 (1.11.0-4) ... Setting up cmake-data (3.28.3-1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up gcc-13-i686-linux-gnu-base:arm64 (13.2.0-12cross1) ... Setting up cpp-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libquadmath0-i386-cross (14-20240127-1cross1) ... Setting up libelf1:arm64 (0.190-1+b1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-6+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libatomic1-i386-cross (14-20240127-1cross1) ... Setting up libarchive13:arm64 (3.7.2-1) ... Setting up libgomp1-i386-cross (14-20240127-1cross1) ... Setting up libc6-dev-i386-cross (2.37-12cross1) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libgcc-s1-i386-cross (14-20240127-1cross1) ... Setting up dh-autoreconf (20) ... Setting up libitm1-i386-cross (14-20240127-1cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libcurl4:arm64 (8.6.0-2) ... Setting up cpp-i686-linux-gnu (4:13.2.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan8-i386-cross (14-20240127-1cross1) ... Setting up libstdc++6-i386-cross (14-20240127-1cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.28.3-1) ... Setting up debhelper (13.13) ... Setting up libubsan1-i386-cross (14-20240127-1cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libgcc-13-dev-i386-cross (13.2.0-12cross1) ... Setting up gcc-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libstdc++-13-dev-i386-cross (13.2.0-12cross1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up gcc-i686-linux-gnu (4:13.2.0-7) ... Setting up g++-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up g++-i686-linux-gnu (4:13.2.0-7) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-i386 (12.10) ... Setting up libgcc-s1:i386 (14-20240201-3) ... Setting up libc6:i386 (2.37-15) ... Setting up libasan8:i386 (14-20240201-3) ... Setting up libstdc++6:i386 (14-20240201-3) ... Setting up libitm1:i386 (14-20240201-3) ... Setting up libkeyutils1:i386 (1.6.3-3) ... Setting up libssl3:i386 (3.1.5-1) ... Setting up zlib1g:i386 (1:1.3.dfsg-3+b1) ... Setting up libcrypt1:i386 (1:4.4.36-4) ... Setting up libcom-err2:i386 (1.47.0-2+b1) ... Setting up libgomp1:i386 (14-20240201-3) ... Setting up libkrb5support0:i386 (1.20.1-5) ... Setting up libquadmath0:i386 (14-20240201-3) ... Setting up libatomic1:i386 (14-20240201-3) ... Setting up libk5crypto3:i386 (1.20.1-5) ... Setting up libubsan1:i386 (14-20240201-3) ... Setting up libgcc-13-dev:i386 (13.2.0-13) ... Setting up libcrypt-dev:i386 (1:4.4.36-4) ... Setting up libkrb5-3:i386 (1.20.1-5) ... Setting up libgssapi-krb5-2:i386 (1.20.1-5) ... Setting up libtirpc3:i386 (1.3.4+ds-1) ... Setting up libtirpc-dev:i386 (1.3.4+ds-1) ... Setting up libnsl2:i386 (1.3.0-3) ... Setting up libnsl-dev:i386 (1.3.0-3) ... Setting up libc6-dev:i386 (2.37-15) ... Setting up libstdc++-13-dev:i386 (13.2.0-13) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg-3+b1) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.37-15) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.42-2 dpkg-dev_1.22.4 g++-13_13.2.0-13 gcc-13_13.2.0-13 libc6-dev_2.37-15 libstdc++-13-dev_13.2.0-13 libstdc++-13-dev-i386-cross_13.2.0-12cross1 libstdc++6_14-20240201-3 libstdc++6-i386-cross_14-20240127-1cross1 linux-libc-dev_6.6.15-2 Package versions: apt_2.7.10 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-2 binutils-aarch64-linux-gnu_2.42-2 binutils-common_2.42-2 binutils-i686-linux-gnu_2.42-2 bsdextrautils_2.39.3-6 bsdutils_1:2.39.3-6 build-essential_12.10 bzip2_1.0.8-5+b2 cmake_3.28.3-1 cmake-data_3.28.3-1 coreutils_9.4-3 cpp_4:13.2.0-7 cpp-13_13.2.0-13 cpp-13-aarch64-linux-gnu_13.2.0-13 cpp-13-i686-linux-gnu_13.2.0-12cross1 cpp-aarch64-linux-gnu_4:13.2.0-7 cpp-i686-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-i386_12.10 d-shlibs_0.106 dash_0.5.12-6 debconf_1.5.85 debhelper_13.13 debian-archive-keyring_2023.4 debianutils_5.16 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.4 dpkg-cross_2.6.20 dpkg-dev_1.22.4 dwz_0.15-1 fakeroot_1.33-1 file_1:5.45-2+b1 findutils_4.9.0-5 g++_4:13.2.0-7 g++-13_13.2.0-13 g++-13-aarch64-linux-gnu_13.2.0-13 g++-13-i686-linux-gnu_13.2.0-12cross1 g++-aarch64-linux-gnu_4:13.2.0-7 g++-i686-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-13 gcc-13-aarch64-linux-gnu_13.2.0-13 gcc-13-base_13.2.0-13 gcc-13-cross-base_13.2.0-12cross1 gcc-13-i686-linux-gnu_13.2.0-12cross1 gcc-13-i686-linux-gnu-base_13.2.0-12cross1 gcc-14-base_14-20240201-3 gcc-14-cross-base_14-20240127-1cross1 gcc-aarch64-linux-gnu_4:13.2.0-7 gcc-i686-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-1.1+b1 grep_3.11-4 groff-base_1.23.0-3 gzip_1.12-1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libapt-pkg6.0_2.7.10 libarchive-zip-perl_1.68-1 libarchive13_3.7.2-1 libasan8_14-20240201-3 libasan8-i386-cross_14-20240127-1cross1 libatomic1_14-20240201-3 libatomic1-i386-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2 libaudit1_1:3.1.2-2 libbinutils_2.42-2 libblkid1_2.39.3-6 libbrotli1_1.1.0-2+b3 libbz2-1.0_1.0.8-5+b2 libc-bin_2.37-15 libc-dev-bin_2.37-15 libc6_2.37-15 libc6-dev_2.37-15 libc6-dev-i386-cross_2.37-12cross1 libc6-i386-cross_2.37-12cross1 libcap-ng0_0.8.4-2 libcap2_1:2.66-5 libcc1-0_14-20240201-3 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-2 libctf0_2.42-2 libcurl4_8.6.0-2 libdb5.3_5.3.28+dfsg2-4+b1 libdebconfclient0_0.271 libdebhelper-perl_13.13 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.4 libelf1_0.190-1+b1 libexpat1_2.6.0-1 libfakeroot_1.33-1 libffi8_3.4.4-2 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-13 libgcc-13-dev-i386-cross_13.2.0-12cross1 libgcc-s1_14-20240201-3 libgcc-s1-i386-cross_14-20240127-1cross1 libgcrypt20_1.10.3-2 libgdbm-compat4_1.23-5+b1 libgdbm6_1.23-5+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30_3.8.3-1 libgomp1_14-20240201-3 libgomp1-i386-cross_14-20240127-1cross1 libgpg-error0_1.47-3 libgprofng0_2.42-2 libgssapi-krb5-2_1.20.1-5 libhogweed6_3.9.1-2 libhwasan0_14-20240201-3 libicu72_72.1-4 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14-20240201-3 libitm1-i386-cross_14-20240127-1cross1 libjansson4_2.14-2+b2 libjsoncpp25_1.9.5-6+b2 libk5crypto3_1.20.1-5 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-5 libkrb5support0_1.20.1-5 libldap-2.5-0_2.5.13+dfsg-5+b3 liblocale-gettext-perl_1.07-6+b1 liblsan0_14-20240201-3 liblz4-1_1.9.4-1+b2 liblzma5_5.4.5-0.3 libmagic-mgc_1:5.45-2+b1 libmagic1_1:5.45-2+b1 libmd0_1.1.0-2 libmount1_2.39.3-6 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1 libncursesw6_6.4+20240113-1 libnettle8_3.9.1-2 libnghttp2-14_1.59.0-1 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.3-4 libpam-modules_1.5.2-9.1+b1 libpam-modules-bin_1.5.2-9.1+b1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1+b1 libpcre2-8-0_10.42-4 libperl5.38_5.38.2-3 libpipeline1_1.5.7-1+b2 libproc2-0_2:4.0.4-4 libpsl5_0.21.2-1+b1 libquadmath0_14-20240201-3 libquadmath0-i386-cross_14-20240127-1cross1 librhash0_1.4.3-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-4+b1 libsasl2-modules-db_2.1.28+dfsg1-4+b1 libseccomp2_2.5.5-1 libselinux1_3.5-2 libsframe1_2.42-2 libsmartcols1_2.39.3-6 libssh2-1_1.11.0-4 libssl3_3.1.5-1 libstdc++-13-dev_13.2.0-13 libstdc++-13-dev-i386-cross_13.2.0-12cross1 libstdc++6_14-20240201-3 libstdc++6-i386-cross_14-20240127-1cross1 libsub-override-perl_0.10-1 libsystemd0_255.3-2 libtasn1-6_4.19.0-3+b2 libtext-glob-perl_0.11-3 libtinfo6_6.4+20240113-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtool_2.4.7-7 libtsan2_14-20240201-3 libubsan1_14-20240201-3 libubsan1-i386-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_255.3-2 libunistring5_1.1-2 libuuid1_2.39.3-6 libuv1_1.46.0-3 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b2 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxxhash0_0.8.2-2 libyaml-perl_1.31-1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.6.15-2 linux-libc-dev-i386-cross_6.5.8-1cross1 login_1:4.13+dfsg1-3+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-3 mawk_1.3.4.20240123-1 ncurses-base_6.4+20240113-1 ncurses-bin_6.4+20240113-1 patch_2.7.6-7 perl_5.38.2-3 perl-base_5.38.2-3 perl-modules-5.38_5.38.2-3 po-debconf_1.0.21+nmu1 procps_2:4.0.4-4 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.08-6 tar_1.35+dfsg-3 ucf_3.0043+nmu1 usrmerge_39 util-linux_2.39.3-6 xz-utils_5.4.5-0.3 zlib1g_1:1.3.dfsg-3+b1 zlib1g-dev_1:1.3.dfsg-3+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: bifrost Binary: bifrost, libbifrost0, libbifrost-dev Architecture: any Version: 1.3.1-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/pmelsted/bifrost Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/bifrost Vcs-Git: https://salsa.debian.org/med-team/bifrost.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, zlib1g-dev Package-List: bifrost deb python optional arch=any libbifrost-dev deb libdevel optional arch=any libbifrost0 deb libs optional arch=any Checksums-Sha1: 9daeeab211c6f2bd19b8ac6ad12dac770e8f100f 349856 bifrost_1.3.1.orig.tar.gz bf0657121971cc5635e117f45f620bff5202026e 253052 bifrost_1.3.1-1.debian.tar.xz Checksums-Sha256: d6a9baacddba8e9508336c5adff15a8a482774c724fc0710392fed7bb9ad1e8b 349856 bifrost_1.3.1.orig.tar.gz 6b7fa56dd267ab84746d3169cf7a53471c6954176250fe88a7b074cc5fdb9676 253052 bifrost_1.3.1-1.debian.tar.xz Files: 71940660817cb6a0af24663bf00cc5db 349856 bifrost_1.3.1.orig.tar.gz efb8eacd113e4b5f264cea30b0fac580 253052 bifrost_1.3.1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWXu9kRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHTbA/9GvD2gJsMd07oSzjZDNKKJro4Ah4HmBgv RvwYiR3GsIMQz8zgDkaW7CSOALqkaoypeGaNxVHIo7h4lrQYD7SNPMY92J0lToaW etQnjYW3a9Hiz+YejPMngKmNoQx+SLFHQ3wcFcU71sd/B1VfT5TvxB2rwpyKXB15 X6AKrzE1wkIrpmfW969602vNWoxDLp2D45hdpOKV2NuwVy717cuUFwAQpqyMDd08 drfpI8HBleUOdeC0XozdsRgXSf41i+6wlqseRWGPtWSXJDxB7A8ssNOPDnzxRvFs OOzIldoRhULsNgx+KSRSCeVUyhIYyVdgqWCgrjwiMT3TIxDAthdDwamadRfiSU97 n5Eol+doT0kOT2xM0lBCGylGLwhN5CDSXpab1435PINUiP8iTL34tqvAgyzZFLvp 4rIYwRiJrWzhOUFTurKqTOG6w5Du+4PgTT90FvOioAkuNBftQ0iaCCxmI9UPHPRx RiZKWfn6ClYMshvUZ3SV08u3MyOiQgNW76g8l0Mb7YeozAb899Vq2in2ih0KIDNe rQo+lnWvVWLXCRjXsQlIB83ZlbTnc+vvv2odNc6XdIC1xhAF3SkVN0lLeISgFXDK mgY32kM/oKk0KXkjIFwt99M1G+qWyktiFToE+9IdlgL/iShMznwajQOZwYjHrCfA SRlnI8+EJGc= =Lib9 -----END PGP SIGNATURE----- gpgv: Signature made Fri Jan 5 08:20:41 2024 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./bifrost_1.3.1-1.dsc: no acceptable signature found dpkg-source: info: extracting bifrost in /<> dpkg-source: info: unpacking bifrost_1.3.1.orig.tar.gz dpkg-source: info: unpacking bifrost_1.3.1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_soname.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package bifrost dpkg-buildpackage: info: source version 1.3.1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DCOMPILATION_ARCH=OFF cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=i686 -DCMAKE_C_COMPILER=i686-linux-gnu-gcc -DCMAKE_CXX_COMPILER=i686-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/i686-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/i686-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/i686-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DBUILD_TESTING:BOOL=OFF -DCOMPILATION_ARCH=OFF .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/i686-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/i686-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE Disabling native architecture compilation (including AVX2) Build type: Release Maximum k-mer size: 31 Maximum g-mer size: 31 -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3") -- Configuring done (1.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: BUILD_TESTING CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-i686-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-i686-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-i686-linux-gnu/CMakeFiles /<>/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-i686-linux-gnu' make -f src/CMakeFiles/bifrost_static.dir/build.make src/CMakeFiles/bifrost_static.dir/depend make[3]: Entering directory '/<>/obj-i686-linux-gnu' cd /<>/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-i686-linux-gnu /<>/obj-i686-linux-gnu/src /<>/obj-i686-linux-gnu/src/CMakeFiles/bifrost_static.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make -f src/CMakeFiles/bifrost_static.dir/build.make src/CMakeFiles/bifrost_static.dir/build make[3]: Entering directory '/<>/obj-i686-linux-gnu' [ 3%] Building CXX object src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o cd /<>/obj-i686-linux-gnu/src && /usr/bin/i686-linux-gnu-g++ -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/<>/src -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -O3 -MD -MT src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -MF CMakeFiles/bifrost_static.dir/Bifrost.cpp.o.d -o CMakeFiles/bifrost_static.dir/Bifrost.cpp.o -c /<>/src/Bifrost.cpp In file included from /<>/src/BlockedBloomFilter.hpp:14, from /<>/src/CompactedDBG.hpp:27, from /<>/src/Bifrost.cpp:1: /<>/src/fastmod.h: In function ‘uint64_t fastmod::mul128_u32(uint64_t, uint32_t)’: /<>/src/fastmod.h:46:12: error: ‘__uint128_t’ was not declared in this scope; did you mean ‘__uint8_t’? 46 | return ((__uint128_t)lowbits * d) >> 64; | ^~~~~~~~~~~ | __uint8_t /<>/src/fastmod.h:46:24: error: expected ‘)’ before ‘lowbits’ 46 | return ((__uint128_t)lowbits * d) >> 64; | ~ ^~~~~~~ | ) /<>/src/fastmod.h: In function ‘uint64_t fastmod::mul128_s32(uint64_t, int32_t)’: /<>/src/fastmod.h:50:12: error: ‘__int128_t’ was not declared in this scope; did you mean ‘__int128__’? 50 | return ((__int128_t)lowbits * d) >> 64; | ^~~~~~~~~~ | __int128__ /<>/src/fastmod.h:50:23: error: expected ‘)’ before ‘lowbits’ 50 | return ((__int128_t)lowbits * d) >> 64; | ~ ^~~~~~~ | ) /<>/src/fastmod.h: At global scope: /<>/src/fastmod.h:23:21: warning: inline variables are only available with ‘-std=c++17’ or ‘-std=gnu++17’ [-Wc++17-extensions] 23 | #define FASTMOD_API inline | ^~~~~~ /<>/src/fastmod.h:54:1: note: in expansion of macro ‘FASTMOD_API’ 54 | FASTMOD_API uint64_t mul128_u64(__uint128_t lowbits, uint64_t d) { | ^~~~~~~~~~~ /<>/src/fastmod.h:54:33: error: ‘__uint128_t’ was not declared in this scope; did you mean ‘__uint8_t’? 54 | FASTMOD_API uint64_t mul128_u64(__uint128_t lowbits, uint64_t d) { | ^~~~~~~~~~~ | __uint8_t /<>/src/fastmod.h:54:63: error: expected primary-expression before ‘d’ 54 | FASTMOD_API uint64_t mul128_u64(__uint128_t lowbits, uint64_t d) { | ^ /<>/src/fastmod.h:54:64: error: expression list treated as compound expression in initializer [-fpermissive] 54 | FASTMOD_API uint64_t mul128_u64(__uint128_t lowbits, uint64_t d) { | ^ /<>/src/fastmod.h:139:13: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 139 | FASTMOD_API __uint128_t computeM_u64(uint64_t d) { | ^~~~~~~~~~~ | __uint8_t /<>/src/fastmod.h:149:13: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 149 | FASTMOD_API __uint128_t computeM_s64(int64_t d) { | ^~~~~~~~~~~ | __uint8_t /<>/src/fastmod.h:161:46: error: ‘__uint128_t’ has not been declared 161 | FASTMOD_API uint64_t fastmod_u64(uint64_t a, __uint128_t M, uint64_t d) { | ^~~~~~~~~~~ /<>/src/fastmod.h: In function ‘uint64_t fastmod::fastmod_u64(uint64_t, int, uint64_t)’: /<>/src/fastmod.h:162:3: error: ‘__uint128_t’ was not declared in this scope; did you mean ‘__uint8_t’? 162 | __uint128_t lowbits = M * a; | ^~~~~~~~~~~ | __uint8_t /<>/src/fastmod.h:163:21: error: ‘lowbits’ was not declared in this scope 163 | return mul128_u64(lowbits, d); | ^~~~~~~ /<>/src/fastmod.h:163:20: error: ‘fastmod::mul128_u64’ cannot be used as a function 163 | return mul128_u64(lowbits, d); | ~~~~~~~~~~^~~~~~~~~~~~ /<>/src/fastmod.h: At global scope: /<>/src/fastmod.h:166:46: error: ‘__uint128_t’ has not been declared 166 | FASTMOD_API uint64_t fastdiv_u64(uint64_t a, __uint128_t M) { | ^~~~~~~~~~~ /<>/src/fastmod.h: In function ‘uint64_t fastmod::fastdiv_u64(uint64_t, int)’: /<>/src/fastmod.h:167:20: error: ‘fastmod::mul128_u64’ cannot be used as a function 167 | return mul128_u64(M, a); | ~~~~~~~~~~^~~~~~ /<>/src/BlockedBloomFilter.hpp: At global scope: /<>/src/BlockedBloomFilter.hpp:145:9: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 145 | __uint128_t M_u64; // for fast division/modulo | ^~~~~~~~~~~ | __uint8_t /<>/src/BlockedBloomFilter.hpp:289:9: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 289 | __uint128_t M_u64; // for fast division/modulo | ^~~~~~~~~~~ | __uint8_t In file included from /<>/src/CompactedDBG.hpp:28: /<>/src/Common.hpp: In function ‘bool isDNA(char)’: /<>/src/Common.hpp:48:47: error: narrowing conversion of ‘4504192333906058’ from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} [-Wnarrowing] 48 | static const size_t DNAbits[4] = {0x0ULL, 0x10008A0010008AULL, 0x0ULL, 0x0ULL}; | ^~~~~~~~~~~~~~~~~~~ /<>/src/Common.hpp: In function ‘size_t rndup(size_t)’: /<>/src/Common.hpp:192:12: warning: right shift count >= width of type [-Wshift-count-overflow] 192 | v |= v >> 32; | ~~^~~~~ /<>/src/Common.hpp: At global scope: /<>/src/Common.hpp:198:21: error: redefinition of ‘uint32_t rndup(uint32_t)’ 198 | BFG_INLINE uint32_t rndup(uint32_t v) { | ^~~~~ /<>/src/Common.hpp:184:19: note: ‘size_t rndup(size_t)’ previously defined here 184 | BFG_INLINE size_t rndup(size_t v) { | ^~~~~ In file included from /<>/src/FASTX_Parser.hpp:17, from /<>/src/File_Parser.hpp:10, from /<>/src/CompactedDBG.hpp:29: /<>/src/FASTX_Parser.hpp: In function ‘int64_t ks_getuntil2(kstream_t*, int, kstring_t*, int*, int)’: /<>/src/kseq.h:95:105: warning: right shift count >= width of type [-Wshift-count-overflow] 95 | #define kroundup64(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, (x)|=(x)>>32, ++(x)) | ~~~^~~~ /<>/src/kseq.h:130:33: note: in expansion of macro ‘kroundup64’ 130 | kroundup64(str->m); \ | ^~~~~~~~~~ /<>/src/kseq.h:157:9: note: in expansion of macro ‘__KS_GETUNTIL’ 157 | __KS_GETUNTIL(__read, __bufsize) | ^~~~~~~~~~~~~ /<>/src/kseq.h:234:9: note: in expansion of macro ‘KSTREAM_INIT’ 234 | KSTREAM_INIT(type_t, __read, 16384) \ | ^~~~~~~~~~~~ /<>/src/kseq.h:239:35: note: in expansion of macro ‘KSEQ_INIT2’ 239 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) | ^~~~~~~~~~ /<>/src/FASTX_Parser.hpp:18:1: note: in expansion of macro ‘KSEQ_INIT’ 18 | KSEQ_INIT(gzFile, gzread); | ^~~~~~~~~ /<>/src/FASTX_Parser.hpp: In function ‘int64_t kseq_read(kseq_t*)’: /<>/src/kseq.h:95:105: warning: right shift count >= width of type [-Wshift-count-overflow] 95 | #define kroundup64(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, (x)|=(x)>>32, ++(x)) | ~~~^~~~ /<>/src/kseq.h:207:25: note: in expansion of macro ‘kroundup64’ 207 | kroundup64(seq->seq.m); /* rounded to the next closest 2^k */ \ | ^~~~~~~~~~ /<>/src/kseq.h:237:9: note: in expansion of macro ‘__KSEQ_READ’ 237 | __KSEQ_READ(SCOPE) | ^~~~~~~~~~~ /<>/src/kseq.h:239:35: note: in expansion of macro ‘KSEQ_INIT2’ 239 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read) | ^~~~~~~~~~ /<>/src/FASTX_Parser.hpp:18:1: note: in expansion of macro ‘KSEQ_INIT’ 18 | KSEQ_INIT(gzFile, gzread); | ^~~~~~~~~ /<>/src/File_Parser.hpp: In static member function ‘static int FileParser::getFileFormat(const char*)’: /<>/src/File_Parser.hpp:230:64: warning: right shift count >= width of type [-Wshift-count-overflow] 230 | else if ((reinterpret_cast(buffer)[0] >> 32) == BFG_GRAPHBIN_FORMAT_HEADER) ret_v = 3; // BFG | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/src/File_Parser.hpp:231:64: warning: right shift count >= width of type [-Wshift-count-overflow] 231 | else if ((reinterpret_cast(buffer)[0] >> 32) == BFG_METABIN_FORMAT_HEADER) ret_v = 4; // BFI | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from /<>/src/CompactedDBG.hpp:34: /<>/src/KmerHashTable.hpp: At global scope: /<>/src/KmerHashTable.hpp:19:5: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 19 | __uint128_t M_u64; | ^~~~~~~~~~~ | __uint8_t /<>/src/KmerHashTable.hpp: In copy constructor ‘KmerHashTable::KmerHashTable(const KmerHashTable&)’: /<>/src/KmerHashTable.hpp:153:113: error: class ‘KmerHashTable’ does not have any field named ‘M_u64’ 153 | size_(o.size_), pop(o.pop), sum_psl(o.sum_psl), max_psl(o.max_psl), M_u64(o.M_u64) { | ^~~~~ /<>/src/KmerHashTable.hpp: In constructor ‘KmerHashTable::KmerHashTable(KmerHashTable&&)’: /<>/src/KmerHashTable.hpp:167:41: error: class ‘KmerHashTable’ does not have any field named ‘M_u64’ 167 | M_u64(o.M_u64), max_ratio_occupancy(o.max_ratio_occupancy) { | ^~~~~ /<>/src/KmerHashTable.hpp: In member function ‘KmerHashTable& KmerHashTable::operator=(const KmerHashTable&)’: /<>/src/KmerHashTable.hpp:186:13: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 186 | M_u64 = o.M_u64; | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘KmerHashTable& KmerHashTable::operator=(KmerHashTable&&)’: /<>/src/KmerHashTable.hpp:212:13: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 212 | M_u64 = o.M_u64; | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘void KmerHashTable::clear()’: /<>/src/KmerHashTable.hpp:249:9: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 249 | M_u64 = 0; | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘KmerHashTable::iterator KmerHashTable::find(const Kmer&)’: /<>/src/KmerHashTable.hpp:261:57: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 261 | size_t h = fastmod::fastmod_u64(key.hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘KmerHashTable::const_iterator KmerHashTable::find(const Kmer&) const’: /<>/src/KmerHashTable.hpp:326:57: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 326 | size_t h = fastmod::fastmod_u64(key.hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘size_t KmerHashTable::erase(const_iterator)’: /<>/src/KmerHashTable.hpp:412:80: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 412 | const size_t h = fastmod::fastmod_u64(table_keys[it.h].hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp:430:110: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 430 | while ((i != size_) && !table_keys[j2].isEmpty() && (fastmod::fastmod_u64(table_keys[j2].hash(), M_u64, size_) != j2)) { | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘std::pair::iterator_, bool> KmerHashTable::insert(const Kmer&, const T&)’: /<>/src/KmerHashTable.hpp:469:53: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 469 | size_t h = fastmod::fastmod_u64(key.hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘std::pair::iterator_, bool> KmerHashTable::insert(Kmer&&, T&&)’: /<>/src/KmerHashTable.hpp:569:53: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 569 | size_t h = fastmod::fastmod_u64(key.hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘void KmerHashTable::recomputeMaxPSL(size_t)’: /<>/src/KmerHashTable.hpp:664:85: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 664 | const size_t h = fastmod::fastmod_u64(table_keys[i].hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In lambda function: /<>/src/KmerHashTable.hpp:694:97: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 694 | const size_t h = fastmod::fastmod_u64(table_keys[i].hash(), M_u64, size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp: In member function ‘void KmerHashTable::init_tables(size_t)’: /<>/src/KmerHashTable.hpp:776:9: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 776 | M_u64 = fastmod::computeM_u64(size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp:776:26: error: ‘computeM_u64’ is not a member of ‘fastmod’; did you mean ‘computeM_u32’? 776 | M_u64 = fastmod::computeM_u64(size_); | ^~~~~~~~~~~~ | computeM_u32 /<>/src/KmerHashTable.hpp: In member function ‘void KmerHashTable::reserve(size_t)’: /<>/src/KmerHashTable.hpp:804:13: error: ‘M_u64’ was not declared in this scope; did you mean ‘M_Ef64’? 804 | M_u64 = fastmod::computeM_u64(size_); | ^~~~~ | M_Ef64 /<>/src/KmerHashTable.hpp:804:30: error: ‘computeM_u64’ is not a member of ‘fastmod’; did you mean ‘computeM_u32’? 804 | M_u64 = fastmod::computeM_u64(size_); | ^~~~~~~~~~~~ | computeM_u32 In file included from /<>/src/CompactedDBG.hpp:36: /<>/src/KmerStream.hpp: In member function ‘std::pair ReadQualityHasherMinimizer::update(const char*, size_t, const char*, size_t)’: /<>/src/KmerStream.hpp:119:49: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 119 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadQualityHasherMinimizer::update(const char*, const char*, size_t)’: /<>/src/KmerStream.hpp:201:57: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 201 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadQualityHasherMinimizer::update_p(const char*, size_t, const char*, size_t)’: /<>/src/KmerStream.hpp:270:49: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 270 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadQualityHasherMinimizer::update_p(const char*, const char*, size_t)’: /<>/src/KmerStream.hpp:366:57: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 366 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadHasherMinimizer::update(const char*, size_t, const char*, size_t)’: /<>/src/KmerStream.hpp:577:49: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 577 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadHasherMinimizer::update(const char*, size_t)’: /<>/src/KmerStream.hpp:654:57: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 654 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadHasherMinimizer::update_p(const char*, size_t, const char*, size_t)’: /<>/src/KmerStream.hpp:722:49: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 722 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerStream.hpp: In member function ‘std::pair ReadHasherMinimizer::update_p(const char*, size_t)’: /<>/src/KmerStream.hpp:817:57: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 817 | size_t i = 0, j = 0, prev_pos_min = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/CompactedDBG.hpp:39: /<>/src/MinimizerIndex.hpp: At global scope: /<>/src/MinimizerIndex.hpp:220:9: error: ‘__uint128_t’ does not name a type; did you mean ‘__uint8_t’? 220 | __uint128_t M_u64; | ^~~~~~~~~~~ | __uint8_t In file included from /<>/src/CompactedDBG.hpp:826: /<>/src/CompactedDBG.tcc: In member function ‘bool CompactedDBG::build(CDBG_Build_opt&)’: /<>/src/CompactedDBG.tcc:653:38: error: no matching function for call to ‘max(long unsigned int, size_t)’ 653 | nb_unique_kmers = max(1UL, kms.KmerF0()); | ~~~^~~~~~~~~~~~~~~~~~~ In file included from /usr/i686-linux-gnu/include/c++/13/string:51, from /usr/i686-linux-gnu/include/c++/13/bits/locale_classes.h:40, from /usr/i686-linux-gnu/include/c++/13/bits/ios_base.h:41, from /usr/i686-linux-gnu/include/c++/13/ios:44, from /usr/i686-linux-gnu/include/c++/13/ostream:40, from /usr/i686-linux-gnu/include/c++/13/iostream:41, from /<>/src/CompactedDBG.hpp:12: /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:653:38: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 653 | nb_unique_kmers = max(1UL, kms.KmerF0()); | ~~~^~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:653:38: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 653 | nb_unique_kmers = max(1UL, kms.KmerF0()); | ~~~^~~~~~~~~~~~~~~~~~~ In file included from /usr/i686-linux-gnu/include/c++/13/algorithm:61, from /<>/src/Common.hpp:5: /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:653:38: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 653 | nb_unique_kmers = max(1UL, kms.KmerF0()); | ~~~^~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:653:38: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 653 | nb_unique_kmers = max(1UL, kms.KmerF0()); | ~~~^~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:654:43: error: no matching function for call to ‘max(long unsigned int, size_t)’ 654 | nb_unique_minimizers = max(1UL, kms.MinimizerF0()); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:654:43: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 654 | nb_unique_minimizers = max(1UL, kms.MinimizerF0()); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:654:43: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 654 | nb_unique_minimizers = max(1UL, kms.MinimizerF0()); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:654:43: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 654 | nb_unique_minimizers = max(1UL, kms.MinimizerF0()); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:654:43: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 654 | nb_unique_minimizers = max(1UL, kms.MinimizerF0()); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:655:63: error: no matching function for call to ‘max(long unsigned int, size_t)’ 655 | nb_non_unique_kmers = reference_mode ? 0 : max(1UL, nb_unique_kmers - min(nb_unique_kmers, kms.Kmerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:655:63: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 655 | nb_non_unique_kmers = reference_mode ? 0 : max(1UL, nb_unique_kmers - min(nb_unique_kmers, kms.Kmerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:655:63: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 655 | nb_non_unique_kmers = reference_mode ? 0 : max(1UL, nb_unique_kmers - min(nb_unique_kmers, kms.Kmerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:655:63: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 655 | nb_non_unique_kmers = reference_mode ? 0 : max(1UL, nb_unique_kmers - min(nb_unique_kmers, kms.Kmerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:655:63: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 655 | nb_non_unique_kmers = reference_mode ? 0 : max(1UL, nb_unique_kmers - min(nb_unique_kmers, kms.Kmerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:656:68: error: no matching function for call to ‘max(long unsigned int, size_t)’ 656 | nb_non_unique_minimizers = reference_mode ? 0 : max(1UL, nb_unique_minimizers - min(nb_unique_minimizers, kms.Minimizerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:656:68: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 656 | nb_non_unique_minimizers = reference_mode ? 0 : max(1UL, nb_unique_minimizers - min(nb_unique_minimizers, kms.Minimizerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:656:68: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 656 | nb_non_unique_minimizers = reference_mode ? 0 : max(1UL, nb_unique_minimizers - min(nb_unique_minimizers, kms.Minimizerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:656:68: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 656 | nb_non_unique_minimizers = reference_mode ? 0 : max(1UL, nb_unique_minimizers - min(nb_unique_minimizers, kms.Minimizerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/CompactedDBG.tcc:656:68: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 656 | nb_non_unique_minimizers = reference_mode ? 0 : max(1UL, nb_unique_minimizers - min(nb_unique_minimizers, kms.Minimizerf1())); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In member function ‘const_UnitigMap CompactedDBG::find(const char*, size_t, const minHashIterator&, bool) const’: /<>/src/CompactedDBG.tcc:768:43: warning: right shift count >= width of type [-Wshift-count-overflow] 768 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘UnitigMap CompactedDBG::find(const char*, size_t, const minHashIterator&, bool)’: /<>/src/CompactedDBG.tcc:892:43: warning: right shift count >= width of type [-Wshift-count-overflow] 892 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘const_UnitigMap CompactedDBG::find(const Kmer&, bool) const’: /<>/src/CompactedDBG.tcc:1016:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1016 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘UnitigMap CompactedDBG::find(const Kmer&, bool)’: /<>/src/CompactedDBG.tcc:1219:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1219 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool) const’: /<>/src/CompactedDBG.tcc:1342:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1342 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool)’: /<>/src/CompactedDBG.tcc:1498:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1498 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool) const’: /<>/src/CompactedDBG.tcc:1658:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1658 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool)’: /<>/src/CompactedDBG.tcc:1848:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1848 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘bool CompactedDBG::addUnitig(const std::string&, size_t)’: /<>/src/CompactedDBG.tcc:4725:38: warning: left shift count >= width of type [-Wshift-count-overflow] 4725 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:4727:40: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 4727 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc: In member function ‘void CompactedDBG::moveToAbundant()’: /<>/src/CompactedDBG.tcc:4912:92: warning: right shift count >= width of type [-Wshift-count-overflow] 4912 | if (static_cast(unitig_id_pos & MASK_CONTIG_TYPE) && ((unitig_id_pos >> 32) != RESERVED_ID)) v_km_rm.push_back(unitig_id_pos >> 32); | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:4912:148: warning: right shift count >= width of type [-Wshift-count-overflow] 4912 | if (static_cast(unitig_id_pos & MASK_CONTIG_TYPE) && ((unitig_id_pos >> 32) != RESERVED_ID)) v_km_rm.push_back(unitig_id_pos >> 32); | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘bool CompactedDBG::addUnitig(const std::string&, size_t, size_t, size_t)’: /<>/src/CompactedDBG.tcc:5119:49: warning: left shift count >= width of type [-Wshift-count-overflow] 5119 | const size_t pos_id_unitig_r = (id_unitig_r << 32) | ((static_cast(!is_short_r) - 1) & MASK_CONTIG_TYPE); | ~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:5122:40: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 5122 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc:5124:38: warning: left shift count >= width of type [-Wshift-count-overflow] 5124 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘void CompactedDBG::swapUnitigs(bool, size_t, size_t)’: /<>/src/CompactedDBG.tcc:5315:40: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 5315 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc:5317:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5317 | size_t shift_id_unitig_a = id_a << 32; | ~~~~~^~~~~ /<>/src/CompactedDBG.tcc:5318:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5318 | size_t shift_id_unitig_b = id_b << 32; | ~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In member function ‘typename std::enable_if<(! is_void), void>::type CompactedDBG::deleteUnitig_(bool, bool, size_t, bool)’: /<>/src/CompactedDBG.tcc:6010:42: warning: left shift count >= width of type [-Wshift-count-overflow] 6010 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:6011:44: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 6011 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc: In member function ‘typename std::enable_if::type CompactedDBG::deleteUnitig_(bool, bool, size_t, bool)’: /<>/src/CompactedDBG.tcc:6170:42: warning: left shift count >= width of type [-Wshift-count-overflow] 6170 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:6171:44: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 6171 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc: In member function ‘void CompactedDBG::deleteUnitig_(bool, bool, size_t, const std::string&)’: /<>/src/CompactedDBG.tcc:6315:42: warning: left shift count >= width of type [-Wshift-count-overflow] 6315 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:6316:44: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744071562067968’ to ‘2147483648’ [-Woverflow] 6316 | const size_t mask = MASK_CONTIG_ID | MASK_CONTIG_TYPE; /<>/src/CompactedDBG.tcc: In member function ‘UnitigMap CompactedDBG::find(const Kmer&, const preAllocMinHashIterator&)’: /<>/src/CompactedDBG.tcc:6594:42: warning: right shift count >= width of type [-Wshift-count-overflow] 6594 | unitig_id = v(i, flag_v) >> 32; | ~~~~~~~~~~~~~^~~~~ In file included from /<>/src/CompactedDBG.hpp:828: /<>/src/IO.tcc: In member function ‘bool CompactedDBG::read(const std::string&, size_t, bool)’: /<>/src/IO.tcc:191:60: error: no matching function for call to ‘max(long unsigned int, size_t)’ 191 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:191:60: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 191 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:191:60: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 191 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:191:60: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 191 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:191:60: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 191 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/IO.tcc:261:60: error: no matching function for call to ‘max(long unsigned int, size_t)’ 261 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&)’ 257 | max(const _Tp& __a, const _Tp& __b) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:257:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:261:60: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 261 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: candidate: ‘template const _Tp& std::max(const _Tp&, const _Tp&, _Compare)’ 303 | max(const _Tp& __a, const _Tp& __b, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:303:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:261:60: note: deduced conflicting types for parameter ‘const _Tp’ (‘long unsigned int’ and ‘size_t’ {aka ‘unsigned int’}) 261 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>)’ 5795 | max(initializer_list<_Tp> __l) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5795:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:261:60: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 261 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: candidate: ‘template _Tp std::max(initializer_list<_Tp>, _Compare)’ 5805 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ /usr/i686-linux-gnu/include/c++/13/bits/stl_algo.h:5805:5: note: template argument deduction/substitution failed: /<>/src/IO.tcc:261:60: note: mismatched types ‘std::initializer_list<_Tp>’ and ‘long unsigned int’ 261 | MinimizerIndex hmap_min_unitigs_tmp(max(1UL, kms.MinimizerF0()) * 1.05); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/IO.tcc: In member function ‘bool CompactedDBG::readBinaryIndex(std::istream&, uint64_t)’: /<>/src/IO.tcc:993:55: warning: right shift count >= width of type [-Wshift-count-overflow] 993 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1037:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1037 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1052:61: warning: left shift count >= width of type [-Wshift-count-overflow] 1052 | const size_t pos_id_unitig = (unitig_id << 32) | relative_pos; | ~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1085:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1085 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1094:57: warning: left shift count >= width of type [-Wshift-count-overflow] 1094 | const size_t pos_id_unitig = (km_id << 32) | MASK_CONTIG_TYPE | km_pos; | ~~~~~~^~~~~ /<>/src/IO.tcc:1121:66: warning: right shift count >= width of type [-Wshift-count-overflow] 1121 | vector v_bmp_abundant((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1122:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1122 | vector v_bmp_overcrowded((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1131:58: warning: right shift count >= width of type [-Wshift-count-overflow] 1131 | const bool isAbundant = v_bmp_abundant[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/IO.tcc:1132:64: warning: right shift count >= width of type [-Wshift-count-overflow] 1132 | const bool isOvercrowded = v_bmp_overcrowded[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/IO.tcc: In member function ‘std::pair CompactedDBG::readBinaryGraph(std::istream&)’: /<>/src/IO.tcc:1230:55: warning: right shift count >= width of type [-Wshift-count-overflow] 1230 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc: In member function ‘bool CompactedDBG::writeBinaryGraph(std::ostream&, size_t) const’: /<>/src/IO.tcc:1373:92: warning: left shift count >= width of type [-Wshift-count-overflow] 1373 | const size_t fileformat_version = (static_cast(BFG_GRAPHBIN_FORMAT_HEADER) << 32) | static_cast(BFG_GRAPHBIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1373:92: warning: left shift count >= width of type [-Wshift-count-overflow] 1373 | const size_t fileformat_version = (static_cast(BFG_GRAPHBIN_FORMAT_HEADER) << 32) | static_cast(BFG_GRAPHBIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc: In member function ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const’: /<>/src/IO.tcc:1431:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1431 | const size_t nb_bmp_minz = (hmap_min_unitigs.size() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1442:91: warning: left shift count >= width of type [-Wshift-count-overflow] 1442 | const size_t fileformat_version = (static_cast(BFG_METABIN_FORMAT_HEADER) << 32) | static_cast(BFG_METABIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1442:91: warning: left shift count >= width of type [-Wshift-count-overflow] 1442 | const size_t fileformat_version = (static_cast(BFG_METABIN_FORMAT_HEADER) << 32) | static_cast(BFG_METABIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1471:67: warning: right shift count >= width of type [-Wshift-count-overflow] 1471 | const size_t nb_bmp_unitigs = (v_block_len_unitigs.back() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1471:67: warning: right shift count >= width of type [-Wshift-count-overflow] 1471 | const size_t nb_bmp_unitigs = (v_block_len_unitigs.back() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc: In lambda function: /<>/src/IO.tcc:1494:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1494 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1501:45: warning: right shift count >= width of type [-Wshift-count-overflow] 1501 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1512:49: warning: right shift count >= width of type [-Wshift-count-overflow] 1512 | lv_bmp_km_short[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1516:53: warning: right shift count >= width of type [-Wshift-count-overflow] 1516 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1531:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1531 | lv_bmp_unitigs[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1535:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1535 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc: In member function ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const’: /<>/src/IO.tcc:1681:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1681 | const size_t nb_bmp_special_minz = (nb_special_minz >> 32) + 1; | ~~~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1695:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1695 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1706:73: warning: right shift count >= width of type [-Wshift-count-overflow] 1706 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1713:70: warning: right shift count >= width of type [-Wshift-count-overflow] 1713 | const size_t id_bmp = id_special >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1762:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1762 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1773:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1773 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ In file included from /<>/src/DataManager.hpp:10, from /<>/src/ColoredCDBG.hpp:10, from /<>/src/Bifrost.cpp:2: /<>/src/DataStorage.tcc: In instantiation of ‘std::pair, UnitigColors*> DataStorage::insert_(Kmer, size_t, bool) [with Unitig_data_t = void; size_t = unsigned int]’: /<>/src/DataStorage.tcc:1763:60: required from here /<>/src/DataStorage.tcc:1741:45: warning: narrowing conversion of ‘pos’ from ‘uint64_t’ {aka ‘long long unsigned int’} to ‘unsigned int’ [-Wnarrowing] 1741 | overflow.insert({{head, unitig_sz}, pos}); // Insertion | ^~~ /<>/src/DataStorage.tcc: In instantiation of ‘UnitigColors DataStorage::joinUnitigColors(const_UnitigColorMap&, const_UnitigColorMap&) const [with Unitig_data_t = void; const_UnitigColorMap = UnitigMap, DataStorage, true>]’: /<>/src/DataAccessor.tcc:174:48: required from here /<>/src/DataStorage.tcc:1444:36: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 1444 | size_t prev_color_id = 0xffffffffffffffff; | ^~~~~~~~~~~~~~~~~~ /<>/src/DataStorage.tcc:1445:35: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 1445 | size_t prev_km_dist = 0xffffffffffffffff; | ^~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = true; T = CompressedCoverage_t >]’: /<>/src/UnitigIterator.tcc:7:145: required from ‘unitigIterator::unitigIterator() [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = false]’ /<>/src/ColoredCDBG.tcc:979:54: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = true; T = CompressedCoverage_t >]’: /<>/src/UnitigIterator.tcc:55:9: required from ‘unitigIterator& unitigIterator::operator++() [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = false]’ /<>/src/ColoredCDBG.tcc:991:86: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 88 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t, size_t) [with bool is_const = false; T = CompressedCoverage_t >; KHT_ptr_t = KmerHashTable > >*; size_t = unsigned int]’: /<>/src/KmerHashTable.hpp:389:61: required from ‘KmerHashTable::iterator KmerHashTable::find(size_t) [with T = CompressedCoverage_t >; iterator = KmerHashTable > >::iterator_; size_t = unsigned int]’ /<>/src/UnitigMap.tcc:96:55: required from ‘Kmer UnitigMap::getUnitigHead() const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = false]’ /<>/src/DataStorage.tcc:1600:43: required from here /<>/src/KmerHashTable.hpp:37:72: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 37 | iterator_(KHT_ptr_t ht_, size_t h_) : ht(ht_), h(h_), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = false; T = CompressedCoverage_t >; KHT_ptr_t = KmerHashTable > >*]’: /<>/src/KmerHashTable.hpp:391:16: required from ‘KmerHashTable::iterator KmerHashTable::find(size_t) [with T = CompressedCoverage_t >; iterator = KmerHashTable > >::iterator_; size_t = unsigned int]’ /<>/src/UnitigMap.tcc:96:55: required from ‘Kmer UnitigMap::getUnitigHead() const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = false]’ /<>/src/DataStorage.tcc:1600:43: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘UnitigMap CompactedDBG::find(const Kmer&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’: /<>/src/CompactedDBG.tcc:8075:26: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/CompactedDBG.tcc:1219:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1219 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘void CompactedDBG::swapUnitigs(bool, size_t, size_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:8104:25: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/CompactedDBG.tcc:5317:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5317 | size_t shift_id_unitig_a = id_a << 32; | ~~~~~^~~~~ /<>/src/CompactedDBG.tcc:5318:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5318 | size_t shift_id_unitig_b = id_b << 32; | ~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = false; T = CompressedCoverage_t >]’: /<>/src/CompactedDBG.tcc:8160:97: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 88 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘typename std::enable_if<(! is_void), void>::type CompactedDBG::deleteUnitig_(bool, bool, size_t, bool) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), void>::type = void; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:8197:87: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/CompactedDBG.tcc:6010:42: warning: left shift count >= width of type [-Wshift-count-overflow] 6010 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = false; T = char]’: /<>/src/CompactedDBG.tcc:7469:79: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 88 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::addUnitig(const std::string&, size_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:7577:30: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/CompactedDBG.tcc:4725:38: warning: left shift count >= width of type [-Wshift-count-overflow] 4725 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:4865:62: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744069414584321’ to ‘1’ [-Woverflow] 4865 | else flag_v = v.push_back(MASK_CONTIG_ID + 1, flag_v); /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = true; T = CompressedCoverage_t]’: /<>/src/CompactedDBG.tcc:130:9: required from ‘CompactedDBG& CompactedDBG::toDataGraph(CompactedDBG&&, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:611:45: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 88 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = false; T = CompressedCoverage_t]’: /<>/src/CompactedDBG.tcc:3516:125: required from ‘bool CompactedDBG::construct(const CDBG_Build_opt&, DualBlockedBloomFilter&, Roaring&, size_t, size_t, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:679:62: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] /<>/src/CompactedDBG.tcc: In instantiation of ‘UnitigMap CompactedDBG::find(const Kmer&, bool) [with Unitig_data_t = void; Graph_data_t = void]’: /<>/src/CompactedDBG.tcc:3524:53: required from ‘bool CompactedDBG::construct(const CDBG_Build_opt&, DualBlockedBloomFilter&, Roaring&, size_t, size_t, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:679:62: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/CompactedDBG.tcc:1219:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1219 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘void CompactedDBG::swapUnitigs(bool, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:8104:25: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/CompactedDBG.tcc:5317:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5317 | size_t shift_id_unitig_a = id_a << 32; | ~~~~~^~~~~ /<>/src/CompactedDBG.tcc:5318:37: warning: left shift count >= width of type [-Wshift-count-overflow] 5318 | size_t shift_id_unitig_b = id_b << 32; | ~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘typename std::enable_if::type CompactedDBG::deleteUnitig_(bool, bool, size_t, bool) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = void; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:8197:87: required from ‘size_t CompactedDBG::removeUnitigs(bool, bool, std::vector&) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:706:26: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/CompactedDBG.tcc:6170:42: warning: left shift count >= width of type [-Wshift-count-overflow] 6170 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::addUnitig(const std::string&, size_t) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:7735:30: required from ‘typename std::enable_if::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/CompactedDBG.tcc:4725:38: warning: left shift count >= width of type [-Wshift-count-overflow] 4725 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:4865:62: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744069414584321’ to ‘1’ [-Woverflow] 4865 | else flag_v = v.push_back(MASK_CONTIG_ID + 1, flag_v); /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool) const [with Unitig_data_t = void; Graph_data_t = void]’: /<>/src/IO.tcc:468:72: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/CompactedDBG.tcc:1342:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1342 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’: /<>/src/IO.tcc:469:70: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/CompactedDBG.tcc:1658:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1658 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_& KmerHashTable::iterator_::operator++() [with bool is_const = false; T = unsigned int]’: /<>/src/IO.tcc:667:78: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:88:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 88 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = false; T = unsigned int]’: /<>/src/IO.tcc:804:57: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::writeBinaryGraph(std::ostream&, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::ostream = std::basic_ostream; size_t = unsigned int]’: /<>/src/IO.tcc:1362:28: required from ‘bool CompactedDBG::writeBinaryGraph(const std::string&, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:84:62: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/IO.tcc:1373:92: warning: left shift count >= width of type [-Wshift-count-overflow] 1373 | const size_t fileformat_version = (static_cast(BFG_GRAPHBIN_FORMAT_HEADER) << 32) | static_cast(BFG_GRAPHBIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::ostream = std::basic_ostream; uint64_t = long long unsigned int; size_t = unsigned int]’: /<>/src/IO.tcc:1423:28: required from ‘bool CompactedDBG::writeBinaryIndex(const std::string&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:117:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/IO.tcc:1431:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1431 | const size_t nb_bmp_minz = (hmap_min_unitigs.size() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1442:91: warning: left shift count >= width of type [-Wshift-count-overflow] 1442 | const size_t fileformat_version = (static_cast(BFG_METABIN_FORMAT_HEADER) << 32) | static_cast(BFG_METABIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1471:67: warning: right shift count >= width of type [-Wshift-count-overflow] 1471 | const size_t nb_bmp_unitigs = (v_block_len_unitigs.back() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1472:77: warning: right shift count >= width of type [-Wshift-count-overflow] 1472 | const size_t nb_bmp_km_short = ((km_unitigs.size() * (k_ - g_ + 1)) >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1494:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1494 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1501:45: warning: right shift count >= width of type [-Wshift-count-overflow] 1501 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1512:49: warning: right shift count >= width of type [-Wshift-count-overflow] 1512 | lv_bmp_km_short[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1516:53: warning: right shift count >= width of type [-Wshift-count-overflow] 1516 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1531:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1531 | lv_bmp_unitigs[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1535:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1535 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1681:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1681 | const size_t nb_bmp_special_minz = (nb_special_minz >> 32) + 1; | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1695:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1695 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1706:73: warning: right shift count >= width of type [-Wshift-count-overflow] 1706 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1713:70: warning: right shift count >= width of type [-Wshift-count-overflow] 1713 | const size_t id_bmp = id_special >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1762:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1762 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1773:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1773 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’: /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:203:82: required from ‘bool ColoredCDBG::merge(ColoredCDBG&&, size_t, bool) [with Unitig_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:673:65: required from here /<>/src/CompactedDBG.tcc:5655:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5655 | size_t nb_prev_pred = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:5656:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5656 | size_t nb_prev_succ = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, LockGraph&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’: /<>/src/CompactedDBG.tcc:2284:52: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:203:82: required from ‘bool ColoredCDBG::merge(ColoredCDBG&&, size_t, bool) [with Unitig_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:673:65: required from here /<>/src/CompactedDBG.tcc:5806:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5806 | size_t nb_prev_pred = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:5807:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5807 | size_t nb_prev_succ = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/IO.tcc: In instantiation of ‘std::pair CompactedDBG::readBinaryGraph(std::istream&) [with Unitig_data_t = void; Graph_data_t = void; std::istream = std::basic_istream]’: /<>/src/IO.tcc:1198:27: required from ‘std::pair CompactedDBG::readBinaryGraph(const std::string&) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/IO.tcc:382:46: required from ‘bool CompactedDBG::read(const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:685:46: required from here /<>/src/IO.tcc:1230:55: warning: right shift count >= width of type [-Wshift-count-overflow] 1230 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::readBinaryIndex(std::istream&, uint64_t) [with Unitig_data_t = void; Graph_data_t = void; std::istream = std::basic_istream; uint64_t = long long unsigned int]’: /<>/src/IO.tcc:945:27: required from ‘bool CompactedDBG::readBinaryIndex(const std::string&, uint64_t) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int]’ /<>/src/IO.tcc:392:32: required from ‘bool CompactedDBG::read(const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:685:46: required from here /<>/src/IO.tcc:993:55: warning: right shift count >= width of type [-Wshift-count-overflow] 993 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1037:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1037 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1052:61: warning: left shift count >= width of type [-Wshift-count-overflow] 1052 | const size_t pos_id_unitig = (unitig_id << 32) | relative_pos; | ~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1085:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1085 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1094:57: warning: left shift count >= width of type [-Wshift-count-overflow] 1094 | const size_t pos_id_unitig = (km_id << 32) | MASK_CONTIG_TYPE | km_pos; | ~~~~~~~^~~~~~ /<>/src/IO.tcc:1121:66: warning: right shift count >= width of type [-Wshift-count-overflow] 1121 | vector v_bmp_abundant((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1122:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1122 | vector v_bmp_overcrowded((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1131:58: warning: right shift count >= width of type [-Wshift-count-overflow] 1131 | const bool isAbundant = v_bmp_abundant[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/IO.tcc:1132:64: warning: right shift count >= width of type [-Wshift-count-overflow] 1132 | const bool isOvercrowded = v_bmp_overcrowded[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’: /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:2129:13: required from ‘bool CompactedDBG::merge(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:705:55: required from here /<>/src/CompactedDBG.tcc:5655:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5655 | size_t nb_prev_pred = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:5656:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5656 | size_t nb_prev_succ = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, LockGraph&, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’: /<>/src/CompactedDBG.tcc:2284:52: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:2129:13: required from ‘bool CompactedDBG::merge(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:705:55: required from here /<>/src/CompactedDBG.tcc:5806:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5806 | size_t nb_prev_pred = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc:5807:27: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 5807 | size_t nb_prev_succ = 0xFFFFFFFFFFFFFFFF; | ^~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t, size_t) [with bool is_const = true; T = CompressedCoverage_t >; KHT_ptr_t = const KmerHashTable > >*; size_t = unsigned int]’: /<>/src/KmerHashTable.hpp:396:61: required from ‘KmerHashTable::const_iterator KmerHashTable::find(size_t) const [with T = CompressedCoverage_t >; const_iterator = KmerHashTable > >::iterator_; size_t = unsigned int]’ /<>/src/UnitigMap.tcc:274:51: required from ‘typename std::enable_if<(! is_void), typename std::conditional::type>::type UnitigMap::getData_() const [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = true; typename std::enable_if<(! is_void), typename std::conditional::type>::type = const DataAccessor*; typename std::conditional::type = const DataAccessor*]’ /<>/src/UnitigMap.tcc:253:39: required from ‘UnitigMap::Unitig_data_ptr_t UnitigMap::getData() const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = true; Unitig_data_ptr_t = const DataAccessor*]’ /<>/src/DataAccessor.tcc:243:48: required from here /<>/src/KmerHashTable.hpp:37:72: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 37 | iterator_(KHT_ptr_t ht_, size_t h_) : ht(ht_), h(h_), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = true; T = CompressedCoverage_t >; KHT_ptr_t = const KmerHashTable > >*]’: /<>/src/KmerHashTable.hpp:398:16: required from ‘KmerHashTable::const_iterator KmerHashTable::find(size_t) const [with T = CompressedCoverage_t >; const_iterator = KmerHashTable > >::iterator_; size_t = unsigned int]’ /<>/src/UnitigMap.tcc:274:51: required from ‘typename std::enable_if<(! is_void), typename std::conditional::type>::type UnitigMap::getData_() const [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = true; typename std::enable_if<(! is_void), typename std::conditional::type>::type = const DataAccessor*; typename std::conditional::type = const DataAccessor*]’ /<>/src/UnitigMap.tcc:253:39: required from ‘UnitigMap::Unitig_data_ptr_t UnitigMap::getData() const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = true; Unitig_data_ptr_t = const DataAccessor*]’ /<>/src/DataAccessor.tcc:243:48: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = false; T = CompressedCoverage_t >]’: /<>/src/KmerHashTable.hpp:734:24: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = CompressedCoverage_t >; iterator = KmerHashTable > >::iterator_]’ /<>/src/UnitigIterator.tcc:12:165: required from ‘unitigIterator::unitigIterator(CompactedDBG_ptr_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; bool is_const = false; CompactedDBG_ptr_t = CompactedDBG, DataStorage >*]’ /<>/src/CompactedDBG.tcc:2509:14: required from ‘CompactedDBG::iterator CompactedDBG::begin() [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; iterator = unitigIterator, DataStorage, false>]’ /<>/src/ColoredCDBG.tcc:968:59: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘const_UnitigMap CompactedDBG::find(const Kmer&, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; const_UnitigMap = UnitigMap, DataStorage, true>]’: /<>/src/CompactedDBG.tcc:7428:50: required from ‘void CompactedDBG::createJoinHT(std::vector*, KmerHashTable&, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7465:17: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/CompactedDBG.tcc:1016:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1016 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = false; T = char; KHT_ptr_t = KmerHashTable*]’: /<>/src/KmerHashTable.hpp:732:18: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = char; iterator = KmerHashTable::iterator_]’ /<>/src/CompactedDBG.tcc:7469:56: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = false; T = char]’: /<>/src/KmerHashTable.hpp:734:24: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = char; iterator = KmerHashTable::iterator_]’ /<>/src/CompactedDBG.tcc:7469:56: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’: /<>/src/IO.tcc:468:72: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:422:62: required from ‘bool ColoredCDBG::write(const std::string&, size_t, bool, bool, bool) const [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:632:55: required from here /<>/src/CompactedDBG.tcc:1342:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1342 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’: /<>/src/IO.tcc:469:70: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:422:62: required from ‘bool ColoredCDBG::write(const std::string&, size_t, bool, bool, bool) const [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:632:55: required from here /<>/src/CompactedDBG.tcc:1658:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1658 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::writeBinaryGraph(std::ostream&, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::ostream = std::basic_ostream; size_t = unsigned int]’: /<>/src/IO.tcc:1362:28: required from ‘bool CompactedDBG::writeBinaryGraph(const std::string&, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:84:62: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:422:62: required from ‘bool ColoredCDBG::write(const std::string&, size_t, bool, bool, bool) const [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:632:55: required from here /<>/src/IO.tcc:1373:92: warning: left shift count >= width of type [-Wshift-count-overflow] 1373 | const size_t fileformat_version = (static_cast(BFG_GRAPHBIN_FORMAT_HEADER) << 32) | static_cast(BFG_GRAPHBIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::ostream = std::basic_ostream; uint64_t = long long unsigned int; size_t = unsigned int]’: /<>/src/IO.tcc:1423:28: required from ‘bool CompactedDBG::writeBinaryIndex(const std::string&, uint64_t, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:117:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:422:62: required from ‘bool ColoredCDBG::write(const std::string&, size_t, bool, bool, bool) const [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:632:55: required from here /<>/src/IO.tcc:1431:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1431 | const size_t nb_bmp_minz = (hmap_min_unitigs.size() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1442:91: warning: left shift count >= width of type [-Wshift-count-overflow] 1442 | const size_t fileformat_version = (static_cast(BFG_METABIN_FORMAT_HEADER) << 32) | static_cast(BFG_METABIN_FORMAT_VERSION); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1471:67: warning: right shift count >= width of type [-Wshift-count-overflow] 1471 | const size_t nb_bmp_unitigs = (v_block_len_unitigs.back() >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1472:77: warning: right shift count >= width of type [-Wshift-count-overflow] 1472 | const size_t nb_bmp_km_short = ((km_unitigs.size() * (k_ - g_ + 1)) >> 32) + 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1494:57: warning: right shift count >= width of type [-Wshift-count-overflow] 1494 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1501:45: warning: right shift count >= width of type [-Wshift-count-overflow] 1501 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1512:49: warning: right shift count >= width of type [-Wshift-count-overflow] 1512 | lv_bmp_km_short[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1516:53: warning: right shift count >= width of type [-Wshift-count-overflow] 1516 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1531:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1531 | lv_bmp_unitigs[pos >> 32].add(pos & 0x00000000ffffffffULL); | ~~~~^~~~~ /<>/src/IO.tcc:1535:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1535 | lv_bmp_minz[id_minz >> 32].add(id_minz & 0x00000000ffffffffULL); | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1681:61: warning: right shift count >= width of type [-Wshift-count-overflow] 1681 | const size_t nb_bmp_special_minz = (nb_special_minz >> 32) + 1; | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1695:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1695 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1706:73: warning: right shift count >= width of type [-Wshift-count-overflow] 1706 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1713:70: warning: right shift count >= width of type [-Wshift-count-overflow] 1713 | const size_t id_bmp = id_special >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1762:48: warning: right shift count >= width of type [-Wshift-count-overflow] 1762 | if (v_bmp_minz[id_minz >> 32].contains(id_minz & 0x00000000ffffffffULL)) { | ~~~~~~~~^~~~~ /<>/src/IO.tcc:1773:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1773 | const size_t unitig_id = unitig_idx >> 32; | ~~~~~~~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = false; T = CompressedCoverage_t; KHT_ptr_t = KmerHashTable >*]’: /<>/src/KmerHashTable.hpp:732:18: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = CompressedCoverage_t; iterator = KmerHashTable >::iterator_]’ /<>/src/CompactedDBG.tcc:119:90: required from ‘CompactedDBG& CompactedDBG::toDataGraph(CompactedDBG&&, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:611:45: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = false; T = CompressedCoverage_t]’: /<>/src/KmerHashTable.hpp:734:24: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = CompressedCoverage_t; iterator = KmerHashTable >::iterator_]’ /<>/src/CompactedDBG.tcc:119:90: required from ‘CompactedDBG& CompactedDBG::toDataGraph(CompactedDBG&&, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:611:45: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = false; T = CompressedCoverage_t]’: /usr/i686-linux-gnu/include/c++/13/bits/stl_pair.h:532:9: required from ‘constexpr std::pair<_T1, _T2>::pair() [with _U1 = KmerHashTable >::iterator_; _U2 = bool; typename std::enable_if, std::__is_implicitly_default_constructible<_U2> >::value, bool>::type = true; _T1 = KmerHashTable >::iterator_; _T2 = bool]’ /<>/src/KmerHashTable.hpp:573:45: required from ‘std::pair::iterator_, bool> KmerHashTable::insert(Kmer&&, T&&) [with T = CompressedCoverage_t]’ /<>/src/CompactedDBG.tcc:128:28: required from ‘CompactedDBG& CompactedDBG::toDataGraph(CompactedDBG&&, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:611:45: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = false; T = unsigned char]’: /usr/i686-linux-gnu/include/c++/13/bits/stl_pair.h:532:9: required from ‘constexpr std::pair<_T1, _T2>::pair() [with _U1 = KmerHashTable::iterator_; _U2 = bool; typename std::enable_if, std::__is_implicitly_default_constructible<_U2> >::value, bool>::type = true; _T1 = KmerHashTable::iterator_; _T2 = bool]’ /<>/src/KmerHashTable.hpp:473:45: required from ‘std::pair::iterator_, bool> KmerHashTable::insert(const Kmer&, const T&) [with T = unsigned char]’ /<>/src/CompactedDBG.tcc:3080:135: required from ‘bool CompactedDBG::construct(const CDBG_Build_opt&, DualBlockedBloomFilter&, Roaring&, size_t, size_t, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:679:62: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = true; T = CompressedCoverage_t]’: /<>/src/CompactedDBG.tcc:7309:69: required from ‘void CompactedDBG::createJoinHT(std::vector*, KmerHashTable&, size_t) const [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7634:17: required from ‘typename std::enable_if::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘const_UnitigMap CompactedDBG::find(const Kmer&, bool) const [with Unitig_data_t = void; Graph_data_t = void; const_UnitigMap = UnitigMap]’: /<>/src/CompactedDBG.tcc:7428:50: required from ‘void CompactedDBG::createJoinHT(std::vector*, KmerHashTable&, size_t) const [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7634:17: required from ‘typename std::enable_if::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/CompactedDBG.tcc:1016:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1016 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t, size_t) [with bool is_const = false; T = CompressedCoverage_t; KHT_ptr_t = KmerHashTable >*; size_t = unsigned int]’: /<>/src/KmerHashTable.hpp:389:61: required from ‘KmerHashTable::iterator KmerHashTable::find(size_t) [with T = CompressedCoverage_t; iterator = KmerHashTable >::iterator_; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7651:72: required from ‘typename std::enable_if::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:640:57: required from here /<>/src/KmerHashTable.hpp:37:72: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 37 | iterator_(KHT_ptr_t ht_, size_t h_) : ht(ht_), h(h_), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = false; T = unsigned int; KHT_ptr_t = KmerHashTable*]’: /<>/src/KmerHashTable.hpp:316:16: required from ‘KmerHashTable::iterator KmerHashTable::find(const Kmer&) [with T = unsigned int; iterator = KmerHashTable::iterator_]’ /<>/src/IO.tcc:475:65: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = false; T = unsigned int]’: /<>/src/KmerHashTable.hpp:734:24: required from ‘KmerHashTable::iterator KmerHashTable::begin() [with T = unsigned int; iterator = KmerHashTable::iterator_]’ /<>/src/IO.tcc:544:62: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = true; T = CompressedCoverage_t; KHT_ptr_t = const KmerHashTable >*]’: /<>/src/KmerHashTable.hpp:741:24: required from ‘KmerHashTable::const_iterator KmerHashTable::begin() const [with T = CompressedCoverage_t; const_iterator = KmerHashTable >::iterator_]’ /<>/src/IO.tcc:876:74: required from ‘bool CompactedDBG::writeFASTA(const std::string&, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/IO.tcc:83:48: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = true; T = CompressedCoverage_t]’: /<>/src/KmerHashTable.hpp:743:24: required from ‘KmerHashTable::const_iterator KmerHashTable::begin() const [with T = CompressedCoverage_t; const_iterator = KmerHashTable >::iterator_]’ /<>/src/IO.tcc:876:74: required from ‘bool CompactedDBG::writeFASTA(const std::string&, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/IO.tcc:83:48: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/MinimizerIndex.hpp: In instantiation of ‘MinimizerIndex::iterator_& MinimizerIndex::iterator_::operator++() [with bool is_const = true]’: /<>/src/IO.tcc:1542:17: required from ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::ostream = std::basic_ostream; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:1423:28: required from ‘bool CompactedDBG::writeBinaryIndex(const std::string&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:117:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/MinimizerIndex.hpp:101:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 101 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/MinimizerIndex.hpp: In instantiation of ‘MinimizerIndex::iterator_::iterator_() [with bool is_const = true]’: /<>/src/IO.tcc:1621:48: required from ‘bool CompactedDBG::writeBinaryIndex(std::ostream&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::ostream = std::basic_ostream; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:1423:28: required from ‘bool CompactedDBG::writeBinaryIndex(const std::string&, uint64_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int; size_t = unsigned int]’ /<>/src/IO.tcc:117:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/MinimizerIndex.hpp:34:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 34 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/MinimizerIndex.hpp:34:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 34 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/IO.tcc: In instantiation of ‘std::pair CompactedDBG::readBinaryGraph(std::istream&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::istream = std::basic_istream]’: /<>/src/IO.tcc:1198:27: required from ‘std::pair CompactedDBG::readBinaryGraph(const std::string&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’ /<>/src/IO.tcc:382:46: required from ‘bool CompactedDBG::read(const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:709:71: required from ‘bool ColoredCDBG::read(const std::string&, const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:653:47: required from here /<>/src/IO.tcc:1230:55: warning: right shift count >= width of type [-Wshift-count-overflow] 1230 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc: In instantiation of ‘bool CompactedDBG::readBinaryIndex(std::istream&, uint64_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::istream = std::basic_istream; uint64_t = long long unsigned int]’: /<>/src/IO.tcc:945:27: required from ‘bool CompactedDBG::readBinaryIndex(const std::string&, uint64_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; uint64_t = long long unsigned int]’ /<>/src/IO.tcc:392:32: required from ‘bool CompactedDBG::read(const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:709:71: required from ‘bool ColoredCDBG::read(const std::string&, const std::string&, const std::string&, size_t, bool) [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:653:47: required from here /<>/src/IO.tcc:993:55: warning: right shift count >= width of type [-Wshift-count-overflow] 993 | const size_t file_format_header = file_format >> 32; | ~~~~~~~~~~~~^~~~~ /<>/src/IO.tcc:1037:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1037 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1052:61: warning: left shift count >= width of type [-Wshift-count-overflow] 1052 | const size_t pos_id_unitig = (unitig_id << 32) | relative_pos; | ~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1085:41: warning: left shift count >= width of type [-Wshift-count-overflow] 1085 | const size_t id_bmp = i << 32; | ~~^~~~~ /<>/src/IO.tcc:1094:57: warning: left shift count >= width of type [-Wshift-count-overflow] 1094 | const size_t pos_id_unitig = (km_id << 32) | MASK_CONTIG_TYPE | km_pos; | ~~~~~~~^~~~~~ /<>/src/IO.tcc:1121:66: warning: right shift count >= width of type [-Wshift-count-overflow] 1121 | vector v_bmp_abundant((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1122:69: warning: right shift count >= width of type [-Wshift-count-overflow] 1122 | vector v_bmp_overcrowded((nb_special_minz >> 32) + 1); | ~~~~~~~~~~~~~~~~~^~~~~~ /<>/src/IO.tcc:1131:58: warning: right shift count >= width of type [-Wshift-count-overflow] 1131 | const bool isAbundant = v_bmp_abundant[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/IO.tcc:1132:64: warning: right shift count >= width of type [-Wshift-count-overflow] 1132 | const bool isOvercrowded = v_bmp_overcrowded[i >> 32].contains(i & 0x00000000ffffffffULL); | ~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’: /<>/src/CompactedDBG.tcc:5692:59: required from ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’ /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:203:82: required from ‘bool ColoredCDBG::merge(ColoredCDBG&&, size_t, bool) [with Unitig_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:673:65: required from here /<>/src/CompactedDBG.tcc:1498:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1498 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:5693:57: required from ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’ /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/ColoredCDBG.tcc:203:82: required from ‘bool ColoredCDBG::merge(ColoredCDBG&&, size_t, bool) [with Unitig_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:673:65: required from here /<>/src/CompactedDBG.tcc:1848:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1848 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findPredecessors(const Kmer&, bool) [with Unitig_data_t = void; Graph_data_t = void]’: /<>/src/CompactedDBG.tcc:5692:59: required from ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:2129:13: required from ‘bool CompactedDBG::merge(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:705:55: required from here /<>/src/CompactedDBG.tcc:1498:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1498 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘std::vector > CompactedDBG::findSuccessors(const Kmer&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:5693:57: required from ‘bool CompactedDBG::annotateSplitUnitig(const std::string&, bool) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/CompactedDBG.tcc:2243:61: required from ‘bool CompactedDBG::annotateSplitUnitigs(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:2129:13: required from ‘bool CompactedDBG::merge(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:705:55: required from here /<>/src/CompactedDBG.tcc:1848:43: warning: right shift count >= width of type [-Wshift-count-overflow] 1848 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘bool CompactedDBG::addUnitig(const std::string&, size_t, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:6523:30: required from ‘typename std::enable_if::type CompactedDBG::extractUnitig_(size_t&, size_t&, size_t&, size_t&, const std::vector >&) [with bool is_void = true; Unitig_data_t = void; Graph_data_t = void; typename std::enable_if::type = bool; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:6768:46: required from ‘std::pair CompactedDBG::splitAllUnitigs() [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/CompactedDBG.tcc:2132:44: required from ‘bool CompactedDBG::merge(const CompactedDBG&, size_t, bool) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/Bifrost.cpp:705:55: required from here /<>/src/CompactedDBG.tcc:5119:49: warning: left shift count >= width of type [-Wshift-count-overflow] 5119 | const size_t pos_id_unitig_r = (id_unitig_r << 32) | ((static_cast(!is_short_r) - 1) & MASK_CONTIG_TYPE); | ~~~~~~~~~~~~~^~~~~~ /<>/src/CompactedDBG.tcc:5124:38: warning: left shift count >= width of type [-Wshift-count-overflow] 5124 | size_t pos_id_unitig = id_unitig << 32; | ~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc:5291:62: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744069414584321’ to ‘1’ [-Woverflow] 5291 | else flag_v = v.push_back(MASK_CONTIG_ID + 1, flag_v); /<>/src/CompactedDBG.tcc: In instantiation of ‘const_UnitigMap CompactedDBG::find(const char*, size_t, const minHashIterator&, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; const_UnitigMap = UnitigMap, DataStorage, true>; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:4691:36: required from ‘const_UnitigMap CompactedDBG::findUnitig(const char*, size_t, size_t, const minHashIterator&) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; const_UnitigMap = UnitigMap, DataStorage, true>; size_t = unsigned int]’ /<>/src/Search.tcc:668:72: required from ‘std::vector > > CompactedDBG::searchSequence(const std::string&, bool, bool, bool, bool, bool) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; std::string = std::__cxx11::basic_string]’ /<>/src/ColoredCDBG.tcc:1700:90: required from ‘bool ColoredCDBG::search(const std::vector >&, const std::string&, double, bool, bool, bool, size_t, bool) const [with Unitig_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:725:56: required from here /<>/src/CompactedDBG.tcc:768:43: warning: right shift count >= width of type [-Wshift-count-overflow] 768 | unitig_id = unitig_id_pos >> 32; | ~~~~~~~~~~~~~~^~~~~ /<>/src/CompactedDBG.tcc: In instantiation of ‘const_UnitigMap CompactedDBG::find(const char*, size_t, const minHashIterator&, bool) const [with Unitig_data_t = void; Graph_data_t = void; const_UnitigMap = UnitigMap; size_t = unsigned int]’: /<>/src/CompactedDBG.tcc:4691:36: required from ‘const_UnitigMap CompactedDBG::findUnitig(const char*, size_t, size_t, const minHashIterator&) const [with Unitig_data_t = void; Graph_data_t = void; const_UnitigMap = UnitigMap; size_t = unsigned int]’ /<>/src/Search.tcc:937:72: required from ‘std::vector > > CompactedDBG::searchSequence(const std::string&, bool, bool, bool, bool, double, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string]’ /<>/src/Search.tcc:1152:89: required from ‘bool CompactedDBG::search(const std::vector >&, const std::string&, double, bool, bool, bool, size_t, size_t) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:735:55: required from here /<>/src/CompactedDBG.tcc:768:43: warning: right shift count >= width of type [-Wshift-count-overflow] /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = false; T = CompressedCoverage_t >]’: /usr/i686-linux-gnu/include/c++/13/bits/stl_pair.h:532:9: required from ‘constexpr std::pair<_T1, _T2>::pair() [with _U1 = KmerHashTable > >::iterator_; _U2 = bool; typename std::enable_if, std::__is_implicitly_default_constructible<_U2> >::value, bool>::type = true; _T1 = KmerHashTable > >::iterator_; _T2 = bool]’ /<>/src/KmerHashTable.hpp:573:45: required from ‘std::pair::iterator_, bool> KmerHashTable::insert(Kmer&&, T&&) [with T = CompressedCoverage_t >]’ /<>/src/CompactedDBG.tcc:128:28: required from ‘CompactedDBG& CompactedDBG::toDataGraph(CompactedDBG&&, size_t) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:611:45: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/ColoredCDBG.tcc:399:31: required from ‘bool ColoredCDBG::buildGraph(const CCDBG_Build_opt&) [with Unitig_data_t = void]’ /<>/src/Bifrost.cpp:628:47: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘void KmerHashTable::iterator_::get_to_first() [with bool is_const = true; T = CompressedCoverage_t >]’: /<>/src/KmerHashTable.hpp:743:24: required from ‘KmerHashTable::const_iterator KmerHashTable::begin() const [with T = CompressedCoverage_t >; const_iterator = KmerHashTable > >::iterator_]’ /<>/src/CompactedDBG.tcc:7143:86: required from ‘void CompactedDBG::createJoinHT(std::vector*, KmerHashTable&, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7465:17: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:109:21: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 109 | h = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:110:23: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 110 | psl = 0xffffffffffffffffULL; | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_() [with bool is_const = false; T = char]’: /usr/i686-linux-gnu/include/c++/13/bits/stl_pair.h:532:9: required from ‘constexpr std::pair<_T1, _T2>::pair() [with _U1 = KmerHashTable::iterator_; _U2 = bool; typename std::enable_if, std::__is_implicitly_default_constructible<_U2> >::value, bool>::type = true; _T1 = KmerHashTable::iterator_; _T2 = bool]’ /<>/src/KmerHashTable.hpp:573:45: required from ‘std::pair::iterator_, bool> KmerHashTable::insert(Kmer&&, T&&) [with T = char]’ /<>/src/CompactedDBG.tcc:7152:95: required from ‘void CompactedDBG::createJoinHT(std::vector*, KmerHashTable&, size_t) const [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:7465:17: required from ‘typename std::enable_if<(! is_void), unsigned int>::type CompactedDBG::joinUnitigs_(std::vector*, size_t) [with bool is_void = false; Unitig_data_t = DataAccessor; Graph_data_t = DataStorage; typename std::enable_if<(! is_void), unsigned int>::type = unsigned int; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:708:70: required from ‘bool CompactedDBG::simplify(bool, bool, bool) [with Unitig_data_t = DataAccessor; Graph_data_t = DataStorage]’ /<>/src/Bifrost.cpp:630:58: required from here /<>/src/KmerHashTable.hpp:35:42: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:35:70: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 35 | iterator_() : ht(nullptr), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t) [with bool is_const = false; T = unsigned char; KHT_ptr_t = KmerHashTable*]’: /<>/src/KmerHashTable.hpp:750:16: required from ‘KmerHashTable::iterator KmerHashTable::end() [with T = unsigned char; iterator = KmerHashTable::iterator_]’ /<>/src/KmerHashTable.hpp:403:39: required from ‘size_t KmerHashTable::erase(const_iterator) [with T = unsigned char; size_t = unsigned int; const_iterator = KmerHashTable::iterator_]’ /<>/src/CompactedDBG.tcc:3084:72: required from ‘bool CompactedDBG::construct(const CDBG_Build_opt&, DualBlockedBloomFilter&, Roaring&, size_t, size_t, size_t, size_t) [with Unitig_data_t = void; Graph_data_t = void; size_t = unsigned int]’ /<>/src/CompactedDBG.tcc:679:62: required from ‘bool CompactedDBG::build(CDBG_Build_opt&) [with Unitig_data_t = void; Graph_data_t = void]’ /<>/src/Bifrost.cpp:638:41: required from here /<>/src/KmerHashTable.hpp:36:51: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp:36:79: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 36 | iterator_(KHT_ptr_t ht_) : ht(ht_), h(0xffffffffffffffffULL), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ /<>/src/KmerHashTable.hpp: In instantiation of ‘KmerHashTable::iterator_::iterator_(KHT_ptr_t, size_t) [with bool is_const = true; T = CompressedCoverage_t; KHT_ptr_t = const KmerHashTable >*; size_t = unsigned int]’: /<>/src/KmerHashTable.hpp:396:61: required from ‘KmerHashTable::const_iterator KmerHashTable::find(size_t) const [with T = CompressedCoverage_t; const_iterator = KmerHashTable >::iterator_; size_t = unsigned int]’ /<>/src/UnitigMap.tcc:96:55: required from ‘Kmer UnitigMap::getUnitigHead() const [with Unitig_data_t = void; Graph_data_t = void; bool is_const = true]’ /<>/src/IO.tcc:475:86: required from ‘bool CompactedDBG::writeGFA(const std::string&, size_t, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/IO.tcc:82:41: required from ‘bool CompactedDBG::write(const std::string&, size_t, bool, bool, bool, bool, bool, bool) const [with Unitig_data_t = void; Graph_data_t = void; std::string = std::__cxx11::basic_string; size_t = unsigned int]’ /<>/src/Bifrost.cpp:641:54: required from here /<>/src/KmerHashTable.hpp:37:72: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘18446744073709551615’ to ‘4294967295’ [-Woverflow] 37 | iterator_(KHT_ptr_t ht_, size_t h_) : ht(ht_), h(h_), psl(0xffffffffffffffffULL) {} | ^~~~~~~~~~~~~~~~~~~~~ make[3]: *** [src/CMakeFiles/bifrost_static.dir/build.make:79: src/CMakeFiles/bifrost_static.dir/Bifrost.cpp.o] Error 1 make[3]: Leaving directory '/<>/obj-i686-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:105: src/CMakeFiles/bifrost_static.dir/all] Error 2 make[2]: Leaving directory '/<>/obj-i686-linux-gnu' make[1]: *** [Makefile:139: all] Error 2 make[1]: Leaving directory '/<>/obj-i686-linux-gnu' dh_auto_build: error: cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make: *** [debian/rules:8: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-02-10T09:35:49Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 3296 Build-Time: 25 Distribution: unstable Fail-Stage: build Foreign Architectures: i386 Host Architecture: i386 Install-Time: 51 Job: bifrost_1.3.1-1 Machine Architecture: arm64 Package: bifrost Package-Time: 114 Source-Version: 1.3.1-1 Space: 3296 Status: attempted Version: 1.3.1-1 -------------------------------------------------------------------------------- Finished at 2024-02-10T09:35:49Z Build needed 00:01:54, 3296k disk space