sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | blasr 5.3.5+dfsg-6 (ppc64el) Sun, 03 Nov 2024 04:47:25 +0000 | +==============================================================================+ Package: blasr Version: 5.3.5+dfsg-6 Source Version: 5.3.5+dfsg-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-e00d5ce5-330e-4ca0-bb4b-01fe453d2311' with '<>' I: NOTICE: Log filtering will replace 'build/blasr-M42HC2/resolver-jH0OLo' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [202 kB] Get:2 http://localhost:3142/debian unstable/non-free Sources [83.9 kB] Get:3 http://localhost:3142/debian unstable/non-free-firmware Sources [7076 B] Get:4 http://localhost:3142/debian unstable/contrib Sources [61.9 kB] Get:5 http://localhost:3142/debian unstable/main Sources [10.9 MB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages [10.0 MB] Get:7 http://localhost:3142/debian unstable/main ppc64el Packages [9846 kB] Fetched 31.1 MB in 3s (11.5 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-passwd bash coreutils cpp-14 cpp-14-x86-64-linux-gnu e2fsprogs g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu gpgv libacl1 libapt-pkg6.0t64 libasan8 libatomic1 libaudit-common libaudit1 libcap-ng0 libcap2 libcc1-0 libcom-err2 libdebconfclient0 libext2fs2t64 libgcc-14-dev libgcc-s1 libgmp10 libgnutls30t64 libgomp1 libhogweed6t64 libhwasan0 libidn2-0 libitm1 libjansson4 liblsan0 liblz4-1 liblzma5 libmd0 libmpc3 libmpfr6 libnettle8t64 libp11-kit0 libpam-modules libpam-modules-bin libpam0g libpcre2-8-0 libquadmath0 libseccomp2 libss2 libssl3t64 libstdc++-14-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan2 libubsan1 libudev1 libunistring5 libxxhash0 libzstd1 linux-libc-dev logsave ncurses-bin openssl-provider-legacy sysvinit-utils xz-utils zlib1g 69 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 81.3 MB of archives. After this operation, 205 kB disk space will be freed. Get:1 http://localhost:3142/debian unstable/main amd64 bash amd64 5.2.32-1+b2 [1500 kB] Get:2 http://localhost:3142/debian unstable/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:3 http://localhost:3142/debian unstable/main amd64 ncurses-bin amd64 6.5-2+b1 [434 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libcc1-0 amd64 14.2.0-8 [42.8 kB] Get:5 http://localhost:3142/debian unstable/main amd64 gcc-14-base amd64 14.2.0-8 [47.2 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libgcc-s1 amd64 14.2.0-8 [72.7 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libgomp1 amd64 14.2.0-8 [137 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libitm1 amd64 14.2.0-8 [25.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libatomic1 amd64 14.2.0-8 [9280 B] Get:10 http://localhost:3142/debian unstable/main amd64 libasan8 amd64 14.2.0-8 [2729 kB] Get:11 http://localhost:3142/debian unstable/main amd64 liblsan0 amd64 14.2.0-8 [1205 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libtsan2 amd64 14.2.0-8 [2461 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libubsan1 amd64 14.2.0-8 [1075 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libhwasan0 amd64 14.2.0-8 [1489 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libquadmath0 amd64 14.2.0-8 [145 kB] Get:16 http://localhost:3142/debian unstable/main amd64 gcc-14 amd64 14.2.0-8 [530 kB] Get:17 http://localhost:3142/debian unstable/main amd64 g++-14 amd64 14.2.0-8 [20.2 kB] Get:18 http://localhost:3142/debian unstable/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8 [12.1 MB] Get:19 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-8 [2369 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-8 [2674 kB] Get:21 http://localhost:3142/debian unstable/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8 [21.4 MB] Get:22 http://localhost:3142/debian unstable/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8 [11.1 MB] Get:23 http://localhost:3142/debian unstable/main amd64 cpp-14 amd64 14.2.0-8 [1276 B] Get:24 http://localhost:3142/debian unstable/main amd64 libstdc++6 amd64 14.2.0-8 [714 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b2 [560 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libzstd1 amd64 1.5.6+dfsg-1+b1 [300 kB] Get:29 http://localhost:3142/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libxxhash0 amd64 0.8.2-2+b2 [26.6 kB] Get:31 http://localhost:3142/debian unstable/main amd64 liblz4-1 amd64 1.9.4-3+b1 [60.3 kB] Get:32 http://localhost:3142/debian unstable/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libsystemd0 amd64 256.7-3 [382 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libudev1 amd64 256.7-3 [145 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libapt-pkg6.0t64 amd64 2.9.10 [1045 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libdebconfclient0 amd64 0.273 [10.1 kB] Get:38 http://localhost:3142/debian unstable/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:39 http://localhost:3142/debian unstable/main amd64 gpgv amd64 2.2.45-2 [219 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.2-1+b1 [429 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-2+b1 [429 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libgnutls30t64 amd64 3.8.6-2+b1 [1446 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libseccomp2 amd64 2.5.5-1+b2 [47.4 kB] Get:48 http://localhost:3142/debian unstable/main amd64 apt amd64 2.9.10 [1413 kB] Get:49 http://localhost:3142/debian unstable/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libaudit-common all 1:4.0.1-2 [12.3 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-3 [17.2 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libaudit1 amd64 1:4.0.1-2 [54.4 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB] Get:56 http://localhost:3142/debian unstable/main amd64 logsave amd64 1.47.1-1+b1 [23.0 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libext2fs2t64 amd64 1.47.1-1+b1 [211 kB] Get:58 http://localhost:3142/debian unstable/main amd64 e2fsprogs amd64 1.47.1-1+b1 [585 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libpcre2-8-0 amd64 10.42-4+b2 [266 kB] Get:62 http://localhost:3142/debian unstable/main amd64 openssl-provider-legacy amd64 3.3.2-2 [298 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libssl3t64 amd64 3.3.2-2 [2271 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB] Get:65 http://localhost:3142/debian unstable/main amd64 xz-utils amd64 5.6.3-1+b1 [542 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libss2 amd64 1.47.1-1+b1 [27.9 kB] Get:69 http://localhost:3142/debian unstable/main amd64 linux-libc-dev all 6.11.5-1 [2443 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 81.3 MB in 0s (183 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13016 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.7-2+b1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.7-2+b1) over (2.3.7-2) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13017 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.25.5-2+b1_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-2+b1) over (0.25.5-2) ... Setting up libp11-kit0:amd64 (0.25.5-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13018 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.19.0-3+b3_amd64.deb ... Unpacking libtasn1-6:amd64 (4.19.0-3+b3) over (4.19.0-3+b2) ... Setting up libtasn1-6:amd64 (4.19.0-3+b3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13018 files and directories currently installed.) Preparing to unpack .../libgnutls30t64_3.8.6-2+b1_amd64.deb ... Unpacking libgnutls30t64:amd64 (3.8.6-2+b1) over (3.8.6-2) ... Setting up libgnutls30t64:amd64 (3.8.6-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.5-1+b2_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.5-1+b2) over (2.5.5-1+b1) ... Setting up libseccomp2:amd64 (2.5.5-1+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.10_amd64.deb ... Unpacking apt (2.9.10) over (2.9.8) ... Setting up apt (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.11-1_amd64.deb ... Unpacking sysvinit-utils (3.11-1) over (3.10-3) ... Setting up sysvinit-utils (3.11-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.0.1-2_all.deb ... Unpacking libaudit-common (1:4.0.1-2) over (1:4.0.1-1) ... Setting up libaudit-common (1:4.0.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.5-3_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.5-3) over (0.8.5-2) ... Setting up libcap-ng0:amd64 (0.8.5-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.1-2_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.1-2) over (1:4.0.1-1) ... Setting up libaudit1:amd64 (1:4.0.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13019 files and directories currently installed.) Preparing to unpack .../libpam0g_1.5.3-7+b1_amd64.deb ... Unpacking libpam0g:amd64 (1.5.3-7+b1) over (1.5.3-7) ... Setting up libpam0g:amd64 (1.5.3-7+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.5.3-7+b1_amd64.deb ... Unpacking libpam-modules-bin (1.5.3-7+b1) over (1.5.3-7) ... Setting up libpam-modules-bin (1.5.3-7+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13021 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.3-7+b1_amd64.deb ... Unpacking libpam-modules:amd64 (1.5.3-7+b1) over (1.5.3-7) ... Setting up libpam-modules:amd64 (1.5.3-7+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../logsave_1.47.1-1+b1_amd64.deb ... Unpacking logsave (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libext2fs2t64_1.47.1-1+b1_amd64.deb ... Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13024 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.1-1+b1_amd64.deb ... Unpacking e2fsprogs (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libacl1_2.3.2-2+b1_amd64.deb ... Unpacking libacl1:amd64 (2.3.2-2+b1) over (2.3.2-2) ... Setting up libacl1:amd64 (2.3.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13026 files and directories currently installed.) Preparing to unpack .../libmd0_1.1.0-2+b1_amd64.deb ... Unpacking libmd0:amd64 (1.1.0-2+b1) over (1.1.0-2) ... Setting up libmd0:amd64 (1.1.0-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13027 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.42-4+b2_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.42-4+b2) over (10.42-4+b1) ... Setting up libpcre2-8-0:amd64 (10.42-4+b2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13027 files and directories currently installed.) Preparing to unpack .../openssl-provider-legacy_3.3.2-2_amd64.deb ... Unpacking openssl-provider-legacy (3.3.2-2) over (3.3.2-1) ... Setting up openssl-provider-legacy (3.3.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13027 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.3.2-2_amd64.deb ... Unpacking libssl3t64:amd64 (3.3.2-2) over (3.3.2-1) ... Setting up libssl3t64:amd64 (3.3.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13027 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.5-2+b1_amd64.deb ... Unpacking libtinfo6:amd64 (6.5-2+b1) over (6.5-2) ... Setting up libtinfo6:amd64 (6.5-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../xz-utils_5.6.3-1+b1_amd64.deb ... Unpacking xz-utils (5.6.3-1+b1) over (5.6.2-2) ... Preparing to unpack .../libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libjansson4_2.14-2+b3_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2+b3) over (2.14-2+b2) ... Preparing to unpack .../libss2_1.47.1-1+b1_amd64.deb ... Unpacking libss2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../linux-libc-dev_6.11.5-1_all.deb ... Unpacking linux-libc-dev (6.11.5-1) over (6.11.2-1) ... Setting up linux-libc-dev (6.11.5-1) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up libgomp1:amd64 (14.2.0-8) ... Setting up libjansson4:amd64 (2.14-2+b3) ... Setting up libmpfr6:amd64 (4.2.1-1+b2) ... Setting up xz-utils (5.6.3-1+b1) ... Setting up libquadmath0:amd64 (14.2.0-8) ... Setting up libmpc3:amd64 (1.3.1-1+b3) ... Setting up libatomic1:amd64 (14.2.0-8) ... Setting up libss2:amd64 (1.47.1-1+b1) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-8) ... Setting up logsave (1.47.1-1+b1) ... Setting up cpp-14 (14.2.0-8) ... Setting up libubsan1:amd64 (14.2.0-8) ... Setting up libhwasan0:amd64 (14.2.0-8) ... Setting up libasan8:amd64 (14.2.0-8) ... Setting up libtsan2:amd64 (14.2.0-8) ... Setting up libcc1-0:amd64 (14.2.0-8) ... Setting up liblsan0:amd64 (14.2.0-8) ... Setting up libitm1:amd64 (14.2.0-8) ... Setting up e2fsprogs (1.47.1-1+b1) ... Setting up libgcc-14-dev:amd64 (14.2.0-8) ... Setting up libstdc++-14-dev:amd64 (14.2.0-8) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-8) ... Setting up gcc-14 (14.2.0-8) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-8) ... Setting up g++-14 (14.2.0-8) ... Processing triggers for debianutils (5.20) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'blasr' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/blasr.git Please use: git clone https://salsa.debian.org/med-team/blasr.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 138 kB of source archives. Get:1 http://localhost:3142/debian unstable/main blasr 5.3.5+dfsg-6 (dsc) [2158 B] Get:2 http://localhost:3142/debian unstable/main blasr 5.3.5+dfsg-6 (tar) [124 kB] Get:3 http://localhost:3142/debian unstable/main blasr 5.3.5+dfsg-6 (diff) [11.4 kB] Fetched 138 kB in 1s (214 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/blasr-M42HC2/blasr-5.3.5+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/blasr-M42HC2' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), python3:any, meson, cmake, pkg-config, libboost-dev, libhdf5-dev, zlib1g-dev, libpbseq-dev, libpbbam-dev, libpbdata-dev, libpbcopper-dev, libgtest-dev, libblasr-dev (>= 5.3.4+dfsg-4~), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), python3:any, meson, cmake, pkg-config, libboost-dev, libhdf5-dev, zlib1g-dev, libpbseq-dev, libpbbam-dev, libpbdata-dev, libpbcopper-dev, libgtest-dev, libblasr-dev (>= 5.3.4+dfsg-4~), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [905 B] Get:5 copy:/<>/apt_archive ./ Packages [951 B] Fetched 2465 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cmake cmake-data cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-14-base:ppc64el gcc-14-cross-base gcc-14-powerpc64le-linux-gnu gcc-14-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:ppc64el intltool-debian libaec-dev:ppc64el libaec0:ppc64el libarchive-zip-perl libarchive13t64 libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libblasr-dev:ppc64el libblasr5.3.5:ppc64el libboost-dev:ppc64el libboost1.83-dev:ppc64el libbrotli-dev:ppc64el libbrotli1 libbrotli1:ppc64el libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3t64-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libcurl4t64 libcurl4t64:ppc64el libdb5.3t64:ppc64el libdebhelper-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libelf1t64 libevent-2.1-7t64:ppc64el libexpat1 libfakeroot libffi8:ppc64el libfile-stripnondeterminism-perl libgcc-14-dev:ppc64el libgcc-14-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgmp-dev:ppc64el libgmp10:ppc64el libgmpxx4ldbl:ppc64el libgnutls-dane0t64:ppc64el libgnutls-openssl27t64:ppc64el libgnutls28-dev:ppc64el libgnutls30t64:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2 libgssapi-krb5-2:ppc64el libgtest-dev:ppc64el libhdf5-103-1t64:ppc64el libhdf5-cpp-103-1t64:ppc64el libhdf5-dev:ppc64el libhdf5-fortran-102t64:ppc64el libhdf5-hl-100t64:ppc64el libhdf5-hl-cpp-100t64:ppc64el libhdf5-hl-fortran-100t64:ppc64el libhogweed6t64:ppc64el libhts-dev:ppc64el libhts3t64:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libidn2-dev:ppc64el libitm1:ppc64el libitm1-ppc64el-cross libjpeg-dev:ppc64el libjpeg62-turbo:ppc64el libjpeg62-turbo-dev:ppc64el libjsoncpp26 libk5crypto3 libk5crypto3:ppc64el libkeyutils1 libkeyutils1:ppc64el libkrb5-3 libkrb5-3:ppc64el libkrb5support0 libkrb5support0:ppc64el libldap-2.5-0 libldap-2.5-0:ppc64el liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:ppc64el libnghttp2-14 libnghttp2-14:ppc64el libnghttp2-dev:ppc64el libnghttp3-9:ppc64el libnghttp3-dev:ppc64el libngtcp2-16:ppc64el libngtcp2-crypto-gnutls-dev:ppc64el libngtcp2-crypto-gnutls8:ppc64el libngtcp2-dev:ppc64el libnsl2 libp11-kit-dev:ppc64el libp11-kit0:ppc64el libpbbam-dev:ppc64el libpbbam2.4.0:ppc64el libpbcopper-dev:ppc64el libpbcopper2.3.0:ppc64el libpbdata-dev:ppc64el libpbihdf-dev:ppc64el libpbseq-dev:ppc64el libpipeline1 libpkgconf3 libproc2-0 libpsl-dev:ppc64el libpsl5t64 libpsl5t64:ppc64el libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8t64 librhash1 librtmp-dev:ppc64el librtmp1 librtmp1:ppc64el libsasl2-2 libsasl2-2:ppc64el libsasl2-modules-db libsasl2-modules-db:ppc64el libsqlite3-0 libssh2-1-dev:ppc64el libssh2-1t64 libssh2-1t64:ppc64el libssl-dev:ppc64el libssl3t64:ppc64el libstdc++-14-dev:ppc64el libstdc++-14-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsz2:ppc64el libtasn1-6:ppc64el libtasn1-6-dev:ppc64el libtirpc-common libtirpc3t64 libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunbound8:ppc64el libunistring5:ppc64el libuv1t64 libxml2 libzstd-dev:ppc64el libzstd1:ppc64el linux-libc-dev-ppc64el-cross m4 man-db media-types meson netbase nettle-dev:ppc64el ninja-build pkg-config:ppc64el pkgconf:ppc64el pkgconf-bin po-debconf procps python3 python3-autocommand python3-inflect python3-jaraco.context python3-jaraco.functools python3-jaraco.text python3-minimal python3-more-itertools python3-pkg-resources python3-setuptools python3-typeguard python3-typing-extensions python3-zipp python3.12 python3.12-minimal readline-common sensible-utils zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:ppc64el libboost1.83-doc:ppc64el libboost-atomic1.83-dev:ppc64el libboost-chrono1.83-dev:ppc64el libboost-container1.83-dev:ppc64el libboost-context1.83-dev:ppc64el libboost-contract1.83-dev:ppc64el libboost-coroutine1.83-dev:ppc64el libboost-date-time1.83-dev:ppc64el libboost-exception1.83-dev:ppc64el libboost-fiber1.83-dev:ppc64el libboost-filesystem1.83-dev:ppc64el libboost-graph-parallel1.83-dev:ppc64el libboost-graph1.83-dev:ppc64el libboost-iostreams1.83-dev:ppc64el libboost-json1.83-dev:ppc64el libboost-locale1.83-dev:ppc64el libboost-log1.83-dev:ppc64el libboost-math1.83-dev:ppc64el libboost-mpi-python1.83-dev:ppc64el libboost-mpi1.83-dev:ppc64el libboost-nowide1.83-dev:ppc64el libboost-numpy1.83-dev:ppc64el libboost-program-options1.83-dev:ppc64el libboost-python1.83-dev:ppc64el libboost-random1.83-dev:ppc64el libboost-regex1.83-dev:ppc64el libboost-serialization1.83-dev:ppc64el libboost-stacktrace1.83-dev:ppc64el libboost-system1.83-dev:ppc64el libboost-test1.83-dev:ppc64el libboost-thread1.83-dev:ppc64el libboost-timer1.83-dev:ppc64el libboost-type-erasure1.83-dev:ppc64el libboost-url1.83-dev:ppc64el libboost-wave1.83-dev:ppc64el libboost1.83-tools-dev:ppc64el libmpfrc++-dev:ppc64el libntl-dev:ppc64el glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libcurl4-doc:ppc64el libidn-dev:ppc64el libkrb5-dev:ppc64el libldap2-dev:ppc64el gmp-doc:ppc64el libgmp10-doc:ppc64el libmpfr-dev:ppc64el dns-root-data:ppc64el gnutls-bin:ppc64el gnutls-doc:ppc64el krb5-doc krb5-user krb5-doc:ppc64el krb5-user:ppc64el libhdf5-doc:ppc64el liblzma-doc:ppc64el libnghttp2-doc:ppc64el p11-kit-doc:ppc64el libssl-doc:ppc64el libstdc++-14-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc python3.12-venv python3.12-doc binfmt-support readline-doc Recommended packages: curl | wget | lynx bzip2-doc:ppc64el ca-certificates:ppc64el ca-certificates libarchive-cpio-perl krb5-locales krb5-locales:ppc64el libldap-common libldap-common:ppc64el libgpm2 publicsuffix publicsuffix:ppc64el libsasl2-modules libsasl2-modules:ppc64el libtasn1-doc:ppc64el libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cmake cmake-data cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-14-base:ppc64el gcc-14-cross-base gcc-14-powerpc64le-linux-gnu gcc-14-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base googletest groff-base hdf5-helpers:ppc64el intltool-debian libaec-dev:ppc64el libaec0:ppc64el libarchive-zip-perl libarchive13t64 libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libblasr-dev:ppc64el libblasr5.3.5:ppc64el libboost-dev:ppc64el libboost1.83-dev:ppc64el libbrotli-dev:ppc64el libbrotli1 libbrotli1:ppc64el libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3t64-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libcurl4t64 libcurl4t64:ppc64el libdb5.3t64:ppc64el libdebhelper-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libelf1t64 libevent-2.1-7t64:ppc64el libexpat1 libfakeroot libffi8:ppc64el libfile-stripnondeterminism-perl libgcc-14-dev:ppc64el libgcc-14-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgmp-dev:ppc64el libgmp10:ppc64el libgmpxx4ldbl:ppc64el libgnutls-dane0t64:ppc64el libgnutls-openssl27t64:ppc64el libgnutls28-dev:ppc64el libgnutls30t64:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2 libgssapi-krb5-2:ppc64el libgtest-dev:ppc64el libhdf5-103-1t64:ppc64el libhdf5-cpp-103-1t64:ppc64el libhdf5-dev:ppc64el libhdf5-fortran-102t64:ppc64el libhdf5-hl-100t64:ppc64el libhdf5-hl-cpp-100t64:ppc64el libhdf5-hl-fortran-100t64:ppc64el libhogweed6t64:ppc64el libhts-dev:ppc64el libhts3t64:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libidn2-dev:ppc64el libitm1:ppc64el libitm1-ppc64el-cross libjpeg-dev:ppc64el libjpeg62-turbo:ppc64el libjpeg62-turbo-dev:ppc64el libjsoncpp26 libk5crypto3 libk5crypto3:ppc64el libkeyutils1 libkeyutils1:ppc64el libkrb5-3 libkrb5-3:ppc64el libkrb5support0 libkrb5support0:ppc64el libldap-2.5-0 libldap-2.5-0:ppc64el liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:ppc64el libnghttp2-14 libnghttp2-14:ppc64el libnghttp2-dev:ppc64el libnghttp3-9:ppc64el libnghttp3-dev:ppc64el libngtcp2-16:ppc64el libngtcp2-crypto-gnutls-dev:ppc64el libngtcp2-crypto-gnutls8:ppc64el libngtcp2-dev:ppc64el libnsl2 libp11-kit-dev:ppc64el libp11-kit0:ppc64el libpbbam-dev:ppc64el libpbbam2.4.0:ppc64el libpbcopper-dev:ppc64el libpbcopper2.3.0:ppc64el libpbdata-dev:ppc64el libpbihdf-dev:ppc64el libpbseq-dev:ppc64el libpipeline1 libpkgconf3 libproc2-0 libpsl-dev:ppc64el libpsl5t64 libpsl5t64:ppc64el libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8t64 librhash1 librtmp-dev:ppc64el librtmp1 librtmp1:ppc64el libsasl2-2 libsasl2-2:ppc64el libsasl2-modules-db libsasl2-modules-db:ppc64el libsqlite3-0 libssh2-1-dev:ppc64el libssh2-1t64 libssh2-1t64:ppc64el libssl-dev:ppc64el libssl3t64:ppc64el libstdc++-14-dev:ppc64el libstdc++-14-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsz2:ppc64el libtasn1-6:ppc64el libtasn1-6-dev:ppc64el libtirpc-common libtirpc3t64 libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunbound8:ppc64el libunistring5:ppc64el libuv1t64 libxml2 libzstd-dev:ppc64el libzstd1:ppc64el linux-libc-dev-ppc64el-cross m4 man-db media-types meson netbase nettle-dev:ppc64el ninja-build pkg-config:ppc64el pkgconf:ppc64el pkgconf-bin po-debconf procps python3 python3-autocommand python3-inflect python3-jaraco.context python3-jaraco.functools python3-jaraco.text python3-minimal python3-more-itertools python3-pkg-resources python3-setuptools python3-typeguard python3-typing-extensions python3-zipp python3.12 python3.12-minimal readline-common sbuild-build-depends-main-dummy:ppc64el sensible-utils zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 222 newly installed, 0 to remove and 0 not upgraded. Need to get 173 MB of archives. After this operation, 836 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1008 B] Get:2 http://localhost:3142/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-1 [814 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.6.3-2 [105 kB] Get:4 http://localhost:3142/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-1 [2162 kB] Get:5 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get:6 http://localhost:3142/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get:7 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5-2+b1 [136 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:12 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get:16 http://localhost:3142/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get:17 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-1 [1965 kB] Get:21 http://localhost:3142/debian unstable/main amd64 python3.12 amd64 3.12.7-1 [671 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get:23 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:25 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:26 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:29 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:30 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:32 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:33 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:35 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:36 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:37 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:38 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:39 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:40 http://localhost:3142/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get:41 http://localhost:3142/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.43.1-5 [2832 kB] Get:42 http://localhost:3142/debian unstable/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1 [349 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:52 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-2 [81.6 kB] Get:56 http://localhost:3142/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libuv1t64 amd64 1.48.0-6 [148 kB] Get:58 http://localhost:3142/debian unstable/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get:59 http://localhost:3142/debian unstable/main amd64 gcc-14-powerpc64le-linux-gnu-base amd64 14.2.0-6cross1 [47.0 kB] Get:60 http://localhost:3142/debian unstable/main amd64 cpp-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [10.2 MB] Get:61 http://localhost:3142/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:14.2.0-1 [4860 B] Get:62 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-6cross1 [42.2 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libc6-ppc64el-cross all 2.40-3cross1 [1399 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 14.2.0-6cross1 [35.5 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libgomp1-ppc64el-cross all 14.2.0-6cross1 [135 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libitm1-ppc64el-cross all 14.2.0-6cross1 [28.0 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libatomic1-ppc64el-cross all 14.2.0-6cross1 [9612 B] Get:68 http://localhost:3142/debian unstable/main amd64 libasan8-ppc64el-cross all 14.2.0-6cross1 [2644 kB] Get:69 http://localhost:3142/debian unstable/main amd64 liblsan0-ppc64el-cross all 14.2.0-6cross1 [1202 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libtsan2-ppc64el-cross all 14.2.0-6cross1 [2409 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libstdc++6-ppc64el-cross all 14.2.0-6cross1 [747 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libubsan1-ppc64el-cross all 14.2.0-6cross1 [1080 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libquadmath0-ppc64el-cross all 14.2.0-6cross1 [151 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-ppc64el-cross all 14.2.0-6cross1 [1405 kB] Get:75 http://localhost:3142/debian unstable/main amd64 gcc-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [19.6 MB] Get:76 http://localhost:3142/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:14.2.0-1 [1460 B] Get:77 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 6.11.2-1cross1 [2254 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.40-3cross1 [1856 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-ppc64el-cross all 14.2.0-6cross1 [2478 kB] Get:80 http://localhost:3142/debian unstable/main amd64 g++-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [11.2 MB] Get:81 http://localhost:3142/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:14.2.0-1 [1212 B] Get:82 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.12 [3560 B] Get:83 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get:85 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:88 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:89 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:90 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:91 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:92 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:93 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:94 http://localhost:3142/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:96 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:97 http://localhost:3142/debian unstable/main ppc64el gcc-14-base ppc64el 14.2.0-8 [47.2 kB] Get:98 http://localhost:3142/debian unstable/main amd64 googletest all 1.15.2-1 [514 kB] Get:99 http://localhost:3142/debian unstable/main ppc64el hdf5-helpers ppc64el 1.10.10+repack-4 [23.5 kB] Get:100 http://localhost:3142/debian unstable/main ppc64el libgcc-s1 ppc64el 14.2.0-8 [35.5 kB] Get:101 http://localhost:3142/debian unstable/main ppc64el libc6 ppc64el 2.40-3 [2718 kB] Get:102 http://localhost:3142/debian unstable/main ppc64el libaec0 ppc64el 1.1.3-1+b1 [25.6 kB] Get:103 http://localhost:3142/debian unstable/main ppc64el libsz2 ppc64el 1.1.3-1+b1 [8472 B] Get:104 http://localhost:3142/debian unstable/main ppc64el libaec-dev ppc64el 1.1.3-1+b1 [24.0 kB] Get:105 http://localhost:3142/debian unstable/main ppc64el libasan8 ppc64el 14.2.0-8 [2651 kB] Get:106 http://localhost:3142/debian unstable/main ppc64el libatomic1 ppc64el 14.2.0-8 [9928 B] Get:107 http://localhost:3142/debian unstable/main ppc64el libbrotli1 ppc64el 1.1.0-2+b5 [330 kB] Get:108 http://localhost:3142/debian unstable/main ppc64el libkrb5support0 ppc64el 1.21.3-3 [35.3 kB] Get:109 http://localhost:3142/debian unstable/main ppc64el libcom-err2 ppc64el 1.47.1-1+b1 [23.5 kB] Get:110 http://localhost:3142/debian unstable/main ppc64el libk5crypto3 ppc64el 1.21.3-3 [91.2 kB] Get:111 http://localhost:3142/debian unstable/main ppc64el libkeyutils1 ppc64el 1.6.3-4 [10.3 kB] Get:112 http://localhost:3142/debian unstable/main ppc64el libzstd1 ppc64el 1.5.6+dfsg-1+b1 [313 kB] Get:113 http://localhost:3142/debian unstable/main ppc64el zlib1g ppc64el 1:1.3.dfsg+really1.3.1-1+b1 [87.4 kB] Get:114 http://localhost:3142/debian unstable/main ppc64el libssl3t64 ppc64el 3.3.2-2 [2322 kB] Get:115 http://localhost:3142/debian unstable/main ppc64el libkrb5-3 ppc64el 1.21.3-3 [355 kB] Get:116 http://localhost:3142/debian unstable/main ppc64el libgssapi-krb5-2 ppc64el 1.21.3-3 [150 kB] Get:117 http://localhost:3142/debian unstable/main ppc64el libunistring5 ppc64el 1.2-1+b1 [431 kB] Get:118 http://localhost:3142/debian unstable/main ppc64el libidn2-0 ppc64el 2.3.7-2+b1 [131 kB] Get:119 http://localhost:3142/debian unstable/main ppc64el libgmp10 ppc64el 2:6.3.0+dfsg-2+b2 [572 kB] Get:120 http://localhost:3142/debian unstable/main ppc64el libnettle8t64 ppc64el 3.10-1+b1 [329 kB] Get:121 http://localhost:3142/debian unstable/main ppc64el libhogweed6t64 ppc64el 3.10-1+b1 [339 kB] Get:122 http://localhost:3142/debian unstable/main ppc64el libffi8 ppc64el 3.4.6-1 [23.6 kB] Get:123 http://localhost:3142/debian unstable/main ppc64el libp11-kit0 ppc64el 0.25.5-2+b1 [423 kB] Get:124 http://localhost:3142/debian unstable/main ppc64el libtasn1-6 ppc64el 4.19.0-3+b3 [52.9 kB] Get:125 http://localhost:3142/debian unstable/main ppc64el libgnutls30t64 ppc64el 3.8.6-2+b1 [1407 kB] Get:126 http://localhost:3142/debian unstable/main ppc64el libdb5.3t64 ppc64el 5.3.28+dfsg2-9 [733 kB] Get:127 http://localhost:3142/debian unstable/main ppc64el libsasl2-modules-db ppc64el 2.1.28+dfsg1-8 [21.9 kB] Get:128 http://localhost:3142/debian unstable/main ppc64el libsasl2-2 ppc64el 2.1.28+dfsg1-8 [65.7 kB] Get:129 http://localhost:3142/debian unstable/main ppc64el libldap-2.5-0 ppc64el 2.5.18+dfsg-3+b1 [203 kB] Get:130 http://localhost:3142/debian unstable/main ppc64el libnghttp2-14 ppc64el 1.64.0-1 [82.6 kB] Get:131 http://localhost:3142/debian unstable/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1+b1 [58.8 kB] Get:132 http://localhost:3142/debian unstable/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b5 [63.0 kB] Get:133 http://localhost:3142/debian unstable/main ppc64el libssh2-1t64 ppc64el 1.11.1-1 [256 kB] Get:134 http://localhost:3142/debian unstable/main ppc64el libcurl4t64 ppc64el 8.10.1-2 [373 kB] Get:135 http://localhost:3142/debian unstable/main ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4 [1135 kB] Get:136 http://localhost:3142/debian unstable/main ppc64el libstdc++6 ppc64el 14.2.0-8 [797 kB] Get:137 http://localhost:3142/debian unstable/main ppc64el libhdf5-cpp-103-1t64 ppc64el 1.10.10+repack-4 [124 kB] Get:138 http://localhost:3142/debian unstable/main ppc64el libbz2-1.0 ppc64el 1.0.8-6 [42.2 kB] Get:139 http://localhost:3142/debian unstable/main ppc64el libnghttp3-9 ppc64el 1.4.0-1+b1 [68.5 kB] Get:140 http://localhost:3142/debian unstable/main ppc64el libngtcp2-16 ppc64el 1.6.0-1 [131 kB] Get:141 http://localhost:3142/debian unstable/main ppc64el libngtcp2-crypto-gnutls8 ppc64el 1.6.0-1 [20.0 kB] Get:142 http://localhost:3142/debian unstable/main ppc64el libcurl3t64-gnutls ppc64el 8.10.1-2 [382 kB] Get:143 http://localhost:3142/debian unstable/main ppc64el libdeflate0 ppc64el 1.22-1 [43.1 kB] Get:144 http://localhost:3142/debian unstable/main ppc64el libhtscodecs2 ppc64el 1.6.1-1 [79.2 kB] Get:145 http://localhost:3142/debian unstable/main ppc64el liblzma5 ppc64el 5.6.3-1+b1 [280 kB] Get:146 http://localhost:3142/debian unstable/main ppc64el libhts3t64 ppc64el 1.20+ds-2 [493 kB] Get:147 http://localhost:3142/debian unstable/main ppc64el libpbcopper2.3.0 ppc64el 2.3.0+dfsg-2+b1 [707 kB] Get:148 http://localhost:3142/debian unstable/main ppc64el libpbbam2.4.0 ppc64el 2.4.0+dfsg-1+b4 [799 kB] Get:149 http://localhost:3142/debian unstable/main ppc64el libblasr5.3.5 ppc64el 5.3.5+dfsg-8 [1103 kB] Get:150 http://localhost:3142/debian unstable/main ppc64el libpbcopper-dev ppc64el 2.3.0+dfsg-2+b1 [1061 kB] Get:151 http://localhost:3142/debian unstable/main ppc64el libpbdata-dev ppc64el 5.3.5+dfsg-8 [40.6 kB] Get:152 http://localhost:3142/debian unstable/main ppc64el libgfortran5 ppc64el 14.2.0-8 [520 kB] Get:153 http://localhost:3142/debian unstable/main ppc64el libhdf5-fortran-102t64 ppc64el 1.10.10+repack-4 [95.7 kB] Get:154 http://localhost:3142/debian unstable/main ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4 [72.3 kB] Get:155 http://localhost:3142/debian unstable/main ppc64el libhdf5-hl-fortran-100t64 ppc64el 1.10.10+repack-4 [42.0 kB] Get:156 http://localhost:3142/debian unstable/main ppc64el libhdf5-hl-cpp-100t64 ppc64el 1.10.10+repack-4 [21.6 kB] Get:157 http://localhost:3142/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.36-5 [97.8 kB] Get:158 http://localhost:3142/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.36-5 [132 kB] Get:159 http://localhost:3142/debian unstable/main ppc64el libc6-dev ppc64el 2.40-3 [1863 kB] Get:160 http://localhost:3142/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1+b1 [919 kB] Get:161 http://localhost:3142/debian unstable/main ppc64el libjpeg62-turbo ppc64el 1:2.1.5-3+b1 [186 kB] Get:162 http://localhost:3142/debian unstable/main ppc64el libjpeg62-turbo-dev ppc64el 1:2.1.5-3+b1 [308 kB] Get:163 http://localhost:3142/debian unstable/main ppc64el libjpeg-dev ppc64el 1:2.1.5-3+b1 [72.2 kB] Get:164 http://localhost:3142/debian unstable/main ppc64el libbrotli-dev ppc64el 1.1.0-2+b5 [351 kB] Get:165 http://localhost:3142/debian unstable/main ppc64el libevent-2.1-7t64 ppc64el 2.1.12-stable-10+b1 [189 kB] Get:166 http://localhost:3142/debian unstable/main ppc64el libunbound8 ppc64el 1.22.0-1 [622 kB] Get:167 http://localhost:3142/debian unstable/main ppc64el libgnutls-dane0t64 ppc64el 3.8.6-2+b1 [442 kB] Get:168 http://localhost:3142/debian unstable/main ppc64el libgnutls-openssl27t64 ppc64el 3.8.6-2+b1 [441 kB] Get:169 http://localhost:3142/debian unstable/main ppc64el libidn2-dev ppc64el 2.3.7-2+b1 [126 kB] Get:170 http://localhost:3142/debian unstable/main ppc64el libp11-kit-dev ppc64el 0.25.5-2+b1 [208 kB] Get:171 http://localhost:3142/debian unstable/main ppc64el libtasn1-6-dev ppc64el 4.19.0-3+b3 [103 kB] Get:172 http://localhost:3142/debian unstable/main ppc64el libgmpxx4ldbl ppc64el 2:6.3.0+dfsg-2+b2 [330 kB] Get:173 http://localhost:3142/debian unstable/main ppc64el libgmp-dev ppc64el 2:6.3.0+dfsg-2+b2 [660 kB] Get:174 http://localhost:3142/debian unstable/main ppc64el nettle-dev ppc64el 3.10-1+b1 [1351 kB] Get:175 http://localhost:3142/debian unstable/main ppc64el libgnutls28-dev ppc64el 3.8.6-2+b1 [1445 kB] Get:176 http://localhost:3142/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:177 http://localhost:3142/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:178 http://localhost:3142/debian unstable/main ppc64el pkgconf ppc64el 1.8.1-4 [26.2 kB] Get:179 http://localhost:3142/debian unstable/main ppc64el libnghttp2-dev ppc64el 1.64.0-1 [124 kB] Get:180 http://localhost:3142/debian unstable/main ppc64el libnghttp3-dev ppc64el 1.4.0-1+b1 [94.7 kB] Get:181 http://localhost:3142/debian unstable/main ppc64el libngtcp2-crypto-gnutls-dev ppc64el 1.6.0-1 [25.0 kB] Get:182 http://localhost:3142/debian unstable/main ppc64el libngtcp2-dev ppc64el 1.6.0-1 [184 kB] Get:183 http://localhost:3142/debian unstable/main ppc64el libpsl-dev ppc64el 0.21.2-1.1+b1 [79.7 kB] Get:184 http://localhost:3142/debian unstable/main ppc64el librtmp-dev ppc64el 2.4+20151223.gitfa8646d.1-2+b5 [73.4 kB] Get:185 http://localhost:3142/debian unstable/main ppc64el libssl-dev ppc64el 3.3.2-2 [2892 kB] Get:186 http://localhost:3142/debian unstable/main ppc64el libssh2-1-dev ppc64el 1.11.1-1 [409 kB] Get:187 http://localhost:3142/debian unstable/main ppc64el libzstd-dev ppc64el 1.5.6+dfsg-1+b1 [382 kB] Get:188 http://localhost:3142/debian unstable/main ppc64el libcurl4-gnutls-dev ppc64el 8.10.1-2 [510 kB] Get:189 http://localhost:3142/debian unstable/main ppc64el libhdf5-dev ppc64el 1.10.10+repack-4 [2851 kB] Get:190 http://localhost:3142/debian unstable/main ppc64el libbz2-dev ppc64el 1.0.8-6 [36.2 kB] Get:191 http://localhost:3142/debian unstable/main ppc64el libdeflate-dev ppc64el 1.22-1 [51.3 kB] Get:192 http://localhost:3142/debian unstable/main ppc64el liblzma-dev ppc64el 5.6.3-1+b1 [325 kB] Get:193 http://localhost:3142/debian unstable/main ppc64el libhts-dev ppc64el 1.20+ds-2 [1734 kB] Get:194 http://localhost:3142/debian unstable/main ppc64el libpbbam-dev ppc64el 2.4.0+dfsg-1+b4 [88.4 kB] Get:195 http://localhost:3142/debian unstable/main ppc64el libblasr-dev ppc64el 5.3.5+dfsg-8 [2118 kB] Get:196 http://localhost:3142/debian unstable/main ppc64el libgomp1 ppc64el 14.2.0-8 [142 kB] Get:197 http://localhost:3142/debian unstable/main ppc64el libitm1 ppc64el 14.2.0-8 [28.6 kB] Get:198 http://localhost:3142/debian unstable/main ppc64el liblsan0 ppc64el 14.2.0-8 [1203 kB] Get:199 http://localhost:3142/debian unstable/main ppc64el libtsan2 ppc64el 14.2.0-8 [2417 kB] Get:200 http://localhost:3142/debian unstable/main ppc64el libubsan1 ppc64el 14.2.0-8 [1081 kB] Get:201 http://localhost:3142/debian unstable/main ppc64el libquadmath0 ppc64el 14.2.0-8 [151 kB] Get:202 http://localhost:3142/debian unstable/main ppc64el libgcc-14-dev ppc64el 14.2.0-8 [1411 kB] Get:203 http://localhost:3142/debian unstable/main ppc64el libstdc++-14-dev ppc64el 14.2.0-8 [2502 kB] Get:204 http://localhost:3142/debian unstable/main ppc64el libboost1.83-dev ppc64el 1.83.0-3.2 [10.6 MB] Get:205 http://localhost:3142/debian unstable/main ppc64el libboost-dev ppc64el 1.83.0.2+b2 [3840 B] Get:206 http://localhost:3142/debian unstable/main ppc64el libgtest-dev ppc64el 1.15.2-1 [257 kB] Get:207 http://localhost:3142/debian unstable/main ppc64el libpbihdf-dev ppc64el 5.3.5+dfsg-8 [47.1 kB] Get:208 http://localhost:3142/debian unstable/main ppc64el libpbseq-dev ppc64el 5.3.5+dfsg-8 [4880 B] Get:209 http://localhost:3142/debian unstable/main amd64 ninja-build amd64 1.12.1-1 [142 kB] Get:210 http://localhost:3142/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:211 http://localhost:3142/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get:212 http://localhost:3142/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:213 http://localhost:3142/debian unstable/main amd64 python3-typeguard all 4.4.0-1 [36.9 kB] Get:214 http://localhost:3142/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:215 http://localhost:3142/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:216 http://localhost:3142/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:217 http://localhost:3142/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get:218 http://localhost:3142/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get:219 http://localhost:3142/debian unstable/main amd64 python3-zipp all 3.20.2-1 [10.3 kB] Get:220 http://localhost:3142/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get:221 http://localhost:3142/debian unstable/main amd64 meson all 1.6.0-1 [628 kB] Get:222 http://localhost:3142/debian unstable/main ppc64el pkg-config ppc64el 1.8.1-4 [14.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 173 MB in 12s (15.0 MB/s) Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... 13031 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.3-2_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-1_amd64.deb ... Unpacking python3.12-minimal (3.12.7-1) ... Setting up libpython3.12-minimal:amd64 (3.12.7-1) ... Setting up libexpat1:amd64 (2.6.3-2) ... Setting up python3.12-minimal (3.12.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13351 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. 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Selecting previously unselected package libkrb5support0:ppc64el. Preparing to unpack .../085-libkrb5support0_1.21.3-3_ppc64el.deb ... Unpacking libkrb5support0:ppc64el (1.21.3-3) ... Selecting previously unselected package libcom-err2:ppc64el. Preparing to unpack .../086-libcom-err2_1.47.1-1+b1_ppc64el.deb ... Unpacking libcom-err2:ppc64el (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:ppc64el. Preparing to unpack .../087-libk5crypto3_1.21.3-3_ppc64el.deb ... Unpacking libk5crypto3:ppc64el (1.21.3-3) ... Selecting previously unselected package libkeyutils1:ppc64el. Preparing to unpack .../088-libkeyutils1_1.6.3-4_ppc64el.deb ... Unpacking libkeyutils1:ppc64el (1.6.3-4) ... Selecting previously unselected package libzstd1:ppc64el. Preparing to unpack .../089-libzstd1_1.5.6+dfsg-1+b1_ppc64el.deb ... Unpacking libzstd1:ppc64el (1.5.6+dfsg-1+b1) ... Selecting previously unselected package zlib1g:ppc64el. 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Unpacking libcurl4t64:ppc64el (8.10.1-2) ... Selecting previously unselected package libhdf5-103-1t64:ppc64el. Preparing to unpack .../112-libhdf5-103-1t64_1.10.10+repack-4_ppc64el.deb ... Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4) ... Selecting previously unselected package libstdc++6:ppc64el. Preparing to unpack .../113-libstdc++6_14.2.0-8_ppc64el.deb ... Unpacking libstdc++6:ppc64el (14.2.0-8) ... Selecting previously unselected package libhdf5-cpp-103-1t64:ppc64el. Preparing to unpack .../114-libhdf5-cpp-103-1t64_1.10.10+repack-4_ppc64el.deb ... Unpacking libhdf5-cpp-103-1t64:ppc64el (1.10.10+repack-4) ... Selecting previously unselected package libbz2-1.0:ppc64el. Preparing to unpack .../115-libbz2-1.0_1.0.8-6_ppc64el.deb ... Unpacking libbz2-1.0:ppc64el (1.0.8-6) ... Selecting previously unselected package libnghttp3-9:ppc64el. Preparing to unpack .../116-libnghttp3-9_1.4.0-1+b1_ppc64el.deb ... Unpacking libnghttp3-9:ppc64el (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-16:ppc64el. Preparing to unpack .../117-libngtcp2-16_1.6.0-1_ppc64el.deb ... Unpacking libngtcp2-16:ppc64el (1.6.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:ppc64el. Preparing to unpack .../118-libngtcp2-crypto-gnutls8_1.6.0-1_ppc64el.deb ... Unpacking libngtcp2-crypto-gnutls8:ppc64el (1.6.0-1) ... Selecting previously unselected package libcurl3t64-gnutls:ppc64el. Preparing to unpack .../119-libcurl3t64-gnutls_8.10.1-2_ppc64el.deb ... Unpacking libcurl3t64-gnutls:ppc64el (8.10.1-2) ... Selecting previously unselected package libdeflate0:ppc64el. Preparing to unpack .../120-libdeflate0_1.22-1_ppc64el.deb ... Unpacking libdeflate0:ppc64el (1.22-1) ... Selecting previously unselected package libhtscodecs2:ppc64el. Preparing to unpack .../121-libhtscodecs2_1.6.1-1_ppc64el.deb ... Unpacking libhtscodecs2:ppc64el (1.6.1-1) ... Selecting previously unselected package liblzma5:ppc64el. 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Unpacking libpbcopper-dev:ppc64el (2.3.0+dfsg-2+b1) ... Selecting previously unselected package libpbdata-dev:ppc64el. Preparing to unpack .../128-libpbdata-dev_5.3.5+dfsg-8_ppc64el.deb ... Unpacking libpbdata-dev:ppc64el (5.3.5+dfsg-8) ... Selecting previously unselected package libgfortran5:ppc64el. Preparing to unpack .../129-libgfortran5_14.2.0-8_ppc64el.deb ... Unpacking libgfortran5:ppc64el (14.2.0-8) ... Selecting previously unselected package libhdf5-fortran-102t64:ppc64el. Preparing to unpack .../130-libhdf5-fortran-102t64_1.10.10+repack-4_ppc64el.deb ... Unpacking libhdf5-fortran-102t64:ppc64el (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-hl-100t64:ppc64el. Preparing to unpack .../131-libhdf5-hl-100t64_1.10.10+repack-4_ppc64el.deb ... Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100t64:ppc64el. 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Preparing to unpack .../147-libp11-kit-dev_0.25.5-2+b1_ppc64el.deb ... Unpacking libp11-kit-dev:ppc64el (0.25.5-2+b1) ... Selecting previously unselected package libtasn1-6-dev:ppc64el. Preparing to unpack .../148-libtasn1-6-dev_4.19.0-3+b3_ppc64el.deb ... Unpacking libtasn1-6-dev:ppc64el (4.19.0-3+b3) ... Selecting previously unselected package libgmpxx4ldbl:ppc64el. Preparing to unpack .../149-libgmpxx4ldbl_2%3a6.3.0+dfsg-2+b2_ppc64el.deb ... Unpacking libgmpxx4ldbl:ppc64el (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package libgmp-dev:ppc64el. Preparing to unpack .../150-libgmp-dev_2%3a6.3.0+dfsg-2+b2_ppc64el.deb ... Unpacking libgmp-dev:ppc64el (2:6.3.0+dfsg-2+b2) ... Selecting previously unselected package nettle-dev:ppc64el. Preparing to unpack .../151-nettle-dev_3.10-1+b1_ppc64el.deb ... Unpacking nettle-dev:ppc64el (3.10-1+b1) ... Selecting previously unselected package libgnutls28-dev:ppc64el. Preparing to unpack .../152-libgnutls28-dev_3.8.6-2+b1_ppc64el.deb ... Unpacking libgnutls28-dev:ppc64el (3.8.6-2+b1) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../153-libpkgconf3_1.8.1-4_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-4) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../154-pkgconf-bin_1.8.1-4_amd64.deb ... Unpacking pkgconf-bin (1.8.1-4) ... Selecting previously unselected package pkgconf:ppc64el. Preparing to unpack .../155-pkgconf_1.8.1-4_ppc64el.deb ... Unpacking pkgconf:ppc64el (1.8.1-4) ... Selecting previously unselected package libnghttp2-dev:ppc64el. Preparing to unpack .../156-libnghttp2-dev_1.64.0-1_ppc64el.deb ... Unpacking libnghttp2-dev:ppc64el (1.64.0-1) ... Selecting previously unselected package libnghttp3-dev:ppc64el. Preparing to unpack .../157-libnghttp3-dev_1.4.0-1+b1_ppc64el.deb ... Unpacking libnghttp3-dev:ppc64el (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-crypto-gnutls-dev:ppc64el. Preparing to unpack .../158-libngtcp2-crypto-gnutls-dev_1.6.0-1_ppc64el.deb ... Unpacking libngtcp2-crypto-gnutls-dev:ppc64el (1.6.0-1) ... Selecting previously unselected package libngtcp2-dev:ppc64el. Preparing to unpack .../159-libngtcp2-dev_1.6.0-1_ppc64el.deb ... Unpacking libngtcp2-dev:ppc64el (1.6.0-1) ... Selecting previously unselected package libpsl-dev:ppc64el. Preparing to unpack .../160-libpsl-dev_0.21.2-1.1+b1_ppc64el.deb ... Unpacking libpsl-dev:ppc64el (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp-dev:ppc64el. Preparing to unpack .../161-librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_ppc64el.deb ... Unpacking librtmp-dev:ppc64el (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssl-dev:ppc64el. Preparing to unpack .../162-libssl-dev_3.3.2-2_ppc64el.deb ... Unpacking libssl-dev:ppc64el (3.3.2-2) ... Selecting previously unselected package libssh2-1-dev:ppc64el. Preparing to unpack .../163-libssh2-1-dev_1.11.1-1_ppc64el.deb ... Unpacking libssh2-1-dev:ppc64el (1.11.1-1) ... Selecting previously unselected package libzstd-dev:ppc64el. Preparing to unpack .../164-libzstd-dev_1.5.6+dfsg-1+b1_ppc64el.deb ... Unpacking libzstd-dev:ppc64el (1.5.6+dfsg-1+b1) ... Selecting previously unselected package libcurl4-gnutls-dev:ppc64el. Preparing to unpack .../165-libcurl4-gnutls-dev_8.10.1-2_ppc64el.deb ... Unpacking libcurl4-gnutls-dev:ppc64el (8.10.1-2) ... Selecting previously unselected package libhdf5-dev:ppc64el. Preparing to unpack .../166-libhdf5-dev_1.10.10+repack-4_ppc64el.deb ... Unpacking libhdf5-dev:ppc64el (1.10.10+repack-4) ... Selecting previously unselected package libbz2-dev:ppc64el. Preparing to unpack .../167-libbz2-dev_1.0.8-6_ppc64el.deb ... Unpacking libbz2-dev:ppc64el (1.0.8-6) ... Selecting previously unselected package libdeflate-dev:ppc64el. Preparing to unpack .../168-libdeflate-dev_1.22-1_ppc64el.deb ... Unpacking libdeflate-dev:ppc64el (1.22-1) ... Selecting previously unselected package liblzma-dev:ppc64el. Preparing to unpack .../169-liblzma-dev_5.6.3-1+b1_ppc64el.deb ... Unpacking liblzma-dev:ppc64el (5.6.3-1+b1) ... Selecting previously unselected package libhts-dev:ppc64el. Preparing to unpack .../170-libhts-dev_1.20+ds-2_ppc64el.deb ... Unpacking libhts-dev:ppc64el (1.20+ds-2) ... Selecting previously unselected package libpbbam-dev:ppc64el. Preparing to unpack .../171-libpbbam-dev_2.4.0+dfsg-1+b4_ppc64el.deb ... Unpacking libpbbam-dev:ppc64el (2.4.0+dfsg-1+b4) ... Selecting previously unselected package libblasr-dev:ppc64el. Preparing to unpack .../172-libblasr-dev_5.3.5+dfsg-8_ppc64el.deb ... Unpacking libblasr-dev:ppc64el (5.3.5+dfsg-8) ... Selecting previously unselected package libgomp1:ppc64el. Preparing to unpack .../173-libgomp1_14.2.0-8_ppc64el.deb ... Unpacking libgomp1:ppc64el (14.2.0-8) ... Selecting previously unselected package libitm1:ppc64el. 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Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up hdf5-helpers:ppc64el (1.10.10+repack-4) ... Setting up gcc-14-powerpc64le-linux-gnu-base:amd64 (14.2.0-6cross1) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up gcc-14-base:ppc64el (14.2.0-8) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libc6-ppc64el-cross (2.40-3cross1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:amd64 (1.1.0-2+b5) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libuv1t64:amd64 (1.48.0-6) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14.2.0-6cross1) ... Setting up file (1:5.45-3+b1) ... Setting up libgomp1-ppc64el-cross (14.2.0-6cross1) ... Setting up googletest (1.15.2-1) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up ninja-build (1.12.1-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libjsoncpp26:amd64 (1.9.6-2) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up autopoint (0.22.5-2) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up cpp-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up libncursesw6:amd64 (6.5-2+b1) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up libitm1-ppc64el-cross (14.2.0-6cross1) ... Setting up libatomic1-ppc64el-cross (14.2.0-6cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up linux-libc-dev-ppc64el-cross (6.11.2-1cross1) ... Setting up procps (2:4.0.4-6) ... Setting up netbase (6.4) ... Setting up cmake-data (3.30.5-1) ... Setting up librhash1:amd64 (1.4.5-1) ... Setting up libgcc-s1-ppc64el-cross (14.2.0-6cross1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up binutils-powerpc64le-linux-gnu (2.43.1-5) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up cpp-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libgtest-dev:ppc64el (1.15.2-1) ... Setting up libc6-dev-ppc64el-cross (2.40-3cross1) ... Setting up libtool (2.4.7-8) ... Setting up libquadmath0-ppc64el-cross (14.2.0-6cross1) ... Setting up libasan8-ppc64el-cross (14.2.0-6cross1) ... Setting up liblsan0-ppc64el-cross (14.2.0-6cross1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:ppc64el (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libtsan2-ppc64el-cross (14.2.0-6cross1) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up pkg-config:ppc64el (1.8.1-4) ... Setting up libstdc++6-ppc64el-cross (14.2.0-6cross1) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libarchive13t64:amd64 (3.7.4-1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up libubsan1-ppc64el-cross (14.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-ppc64el-cross (14.2.0-6cross1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.30.5-1) ... Setting up libstdc++-14-dev-ppc64el-cross (14.2.0-6cross1) ... Setting up gcc-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-1) ... Setting up g++-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up python3.12 (3.12.7-1) ... Setting up debhelper (13.20) ... Setting up gcc-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up g++-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.20.2-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up crossbuild-essential-ppc64el (12.12) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.0-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up meson (1.6.0-1) ... Setting up libgcc-s1:ppc64el (14.2.0-8) ... Setting up libc6:ppc64el (2.40-3) ... Setting up libnghttp3-9:ppc64el (1.4.0-1+b1) ... Setting up libnghttp3-dev:ppc64el (1.4.0-1+b1) ... Setting up libdb5.3t64:ppc64el (5.3.28+dfsg2-9) ... Setting up libffi8:ppc64el (3.4.6-1) ... Setting up libasan8:ppc64el (14.2.0-8) ... Setting up libtasn1-6:ppc64el (4.19.0-3+b3) ... Setting up libngtcp2-16:ppc64el (1.6.0-1) ... Setting up libtsan2:ppc64el (14.2.0-8) ... Setting up libbz2-1.0:ppc64el (1.0.8-6) ... Setting up libtasn1-6-dev:ppc64el (4.19.0-3+b3) ... Setting up libstdc++6:ppc64el (14.2.0-8) ... Setting up liblsan0:ppc64el (14.2.0-8) ... Setting up libitm1:ppc64el (14.2.0-8) ... Setting up libpbcopper2.3.0:ppc64el (2.3.0+dfsg-2+b1) ... Setting up libhtscodecs2:ppc64el (1.6.1-1) ... Setting up libzstd1:ppc64el (1.5.6+dfsg-1+b1) ... Setting up libkeyutils1:ppc64el (1.6.3-4) ... Setting up libzstd-dev:ppc64el (1.5.6+dfsg-1+b1) ... Setting up liblzma5:ppc64el (5.6.3-1+b1) ... Setting up libbrotli1:ppc64el (1.1.0-2+b5) ... Setting up libnghttp2-14:ppc64el (1.64.0-1) ... Setting up libdeflate0:ppc64el (1.22-1) ... Setting up libevent-2.1-7t64:ppc64el (2.1.12-stable-10+b1) ... Setting up zlib1g:ppc64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:ppc64el (1:4.4.36-5) ... Setting up libcom-err2:ppc64el (1.47.1-1+b1) ... Setting up libngtcp2-dev:ppc64el (1.6.0-1) ... Setting up libgomp1:ppc64el (14.2.0-8) ... Setting up libaec0:ppc64el (1.1.3-1+b1) ... Setting up libkrb5support0:ppc64el (1.21.3-3) ... Setting up libsasl2-modules-db:ppc64el (2.1.28+dfsg1-8) ... Setting up libnettle8t64:ppc64el (3.10-1+b1) ... Setting up libjpeg62-turbo:ppc64el (1:2.1.5-3+b1) ... Setting up libgmp10:ppc64el (2:6.3.0+dfsg-2+b2) ... Setting up libquadmath0:ppc64el (14.2.0-8) ... Setting up libp11-kit0:ppc64el (0.25.5-2+b1) ... Setting up libunistring5:ppc64el (1.2-1+b1) ... Setting up libatomic1:ppc64el (14.2.0-8) ... Setting up libpbcopper-dev:ppc64el (2.3.0+dfsg-2+b1) ... Setting up libk5crypto3:ppc64el (1.21.3-3) ... Setting up libgfortran5:ppc64el (14.2.0-8) ... Setting up liblzma-dev:ppc64el (5.6.3-1+b1) ... Setting up libubsan1:ppc64el (14.2.0-8) ... Setting up libhogweed6t64:ppc64el (3.10-1+b1) ... Setting up libcrypt-dev:ppc64el (1:4.4.36-5) ... Setting up libc6-dev:ppc64el (2.40-3) ... Setting up libgcc-14-dev:ppc64el (14.2.0-8) ... Setting up libdeflate-dev:ppc64el (1.22-1) ... Setting up libstdc++-14-dev:ppc64el (14.2.0-8) ... Setting up libbrotli-dev:ppc64el (1.1.0-2+b5) ... Setting up libp11-kit-dev:ppc64el (0.25.5-2+b1) ... Setting up libsz2:ppc64el (1.1.3-1+b1) ... Setting up libbz2-dev:ppc64el (1.0.8-6) ... Setting up libnghttp2-dev:ppc64el (1.64.0-1) ... Setting up libboost1.83-dev:ppc64el (1.83.0-3.2) ... Setting up libssl3t64:ppc64el (3.3.2-2) ... Setting up libaec-dev:ppc64el (1.1.3-1+b1) ... Setting up libpbdata-dev:ppc64el (5.3.5+dfsg-8) ... Setting up libidn2-0:ppc64el (2.3.7-2+b1) ... Setting up libunbound8:ppc64el (1.22.0-1) ... Setting up libgmpxx4ldbl:ppc64el (2:6.3.0+dfsg-2+b2) ... Setting up libjpeg62-turbo-dev:ppc64el (1:2.1.5-3+b1) ... Setting up libssl-dev:ppc64el (3.3.2-2) ... Setting up libidn2-dev:ppc64el (2.3.7-2+b1) ... Setting up libsasl2-2:ppc64el (2.1.28+dfsg1-8) ... Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libkrb5-3:ppc64el (1.21.3-3) ... Setting up libboost-dev:ppc64el (1.83.0.2+b2) ... Setting up libssh2-1t64:ppc64el (1.11.1-1) ... Setting up libgnutls30t64:ppc64el (3.8.6-2+b1) ... Setting up libgnutls-openssl27t64:ppc64el (3.8.6-2+b1) ... Setting up libgmp-dev:ppc64el (2:6.3.0+dfsg-2+b2) ... Setting up nettle-dev:ppc64el (3.10-1+b1) ... Setting up libpsl5t64:ppc64el (0.21.2-1.1+b1) ... Setting up libjpeg-dev:ppc64el (1:2.1.5-3+b1) ... Setting up libldap-2.5-0:ppc64el (2.5.18+dfsg-3+b1) ... Setting up libpsl-dev:ppc64el (0.21.2-1.1+b1) ... Setting up libgnutls-dane0t64:ppc64el (3.8.6-2+b1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libgssapi-krb5-2:ppc64el (1.21.3-3) ... Setting up libssh2-1-dev:ppc64el (1.11.1-1) ... Setting up libngtcp2-crypto-gnutls8:ppc64el (1.6.0-1) ... Setting up libgnutls28-dev:ppc64el (3.8.6-2+b1) ... Setting up libcurl4t64:ppc64el (8.10.1-2) ... Setting up libcurl3t64-gnutls:ppc64el (8.10.1-2) ... Setting up libngtcp2-crypto-gnutls-dev:ppc64el (1.6.0-1) ... Setting up librtmp-dev:ppc64el (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhts3t64:ppc64el (1.20+ds-2) ... Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4) ... Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4) ... Setting up libpbbam2.4.0:ppc64el (2.4.0+dfsg-1+b4) ... Setting up libhdf5-cpp-103-1t64:ppc64el (1.10.10+repack-4) ... Setting up libhdf5-fortran-102t64:ppc64el (1.10.10+repack-4) ... Setting up libcurl4-gnutls-dev:ppc64el (8.10.1-2) ... Setting up libblasr5.3.5:ppc64el (5.3.5+dfsg-8) ... Setting up libhdf5-hl-cpp-100t64:ppc64el (1.10.10+repack-4) ... Setting up libhts-dev:ppc64el (1.20+ds-2) ... Setting up libhdf5-hl-fortran-100t64:ppc64el (1.10.10+repack-4) ... Setting up libhdf5-dev:ppc64el (1.10.10+repack-4) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libpbbam-dev:ppc64el (2.4.0+dfsg-1+b4) ... Setting up libpbihdf-dev:ppc64el (5.3.5+dfsg-8) ... Setting up libblasr-dev:ppc64el (5.3.5+dfsg-8) ... Setting up libpbseq-dev:ppc64el (5.3.5+dfsg-8) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++-14-dev-ppc64el-cross_14.2.0-6cross1 libstdc++6_14.2.0-8 libstdc++6-ppc64el-cross_14.2.0-6cross1 linux-libc-dev_6.11.5-1 Package versions: apt_2.9.10 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-common_2.43.1-5 binutils-powerpc64le-linux-gnu_2.43.1-5 binutils-x86-64-linux-gnu_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 cmake_3.30.5-1 cmake-data_3.30.5-1 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-powerpc64le-linux-gnu_14.2.0-6cross1 cpp-14-x86-64-linux-gnu_14.2.0-8 cpp-powerpc64le-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-ppc64el_12.12 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-powerpc64le-linux-gnu_14.2.0-6cross1 g++-14-x86-64-linux-gnu_14.2.0-8 g++-powerpc64le-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 gcc-14-base_14.2.0-8 gcc-14-cross-base_14.2.0-6cross1 gcc-14-powerpc64le-linux-gnu_14.2.0-6cross1 gcc-14-powerpc64le-linux-gnu-base_14.2.0-6cross1 gcc-14-x86-64-linux-gnu_14.2.0-8 gcc-powerpc64le-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 googletest_1.15.2-1 gpgv_2.2.45-2 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hdf5-helpers_1.10.10+repack-4 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libaec-dev_1.1.3-1+b1 libaec0_1.1.3-1+b1 libapt-pkg6.0t64_2.9.10 libarchive-zip-perl_1.68-1 libarchive13t64_3.7.4-1 libasan8_14.2.0-8 libasan8-ppc64el-cross_14.2.0-6cross1 libatomic1_14.2.0-8 libatomic1-ppc64el-cross_14.2.0-6cross1 libattr1_1:2.5.2-2 libaudit-common_1:4.0.1-2 libaudit1_1:4.0.1-2 libbinutils_2.43.1-5 libblasr-dev_5.3.5+dfsg-8 libblasr5.3.5_5.3.5+dfsg-8 libblkid1_2.40.2-9 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-3.2 libbrotli-dev_1.1.0-2+b5 libbrotli1_1.1.0-2+b5 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libc6-dev-ppc64el-cross_2.40-3cross1 libc6-ppc64el-cross_2.40-3cross1 libcap-ng0_0.8.5-3 libcap2_1:2.66-5+b1 libcc1-0_14.2.0-8 libcom-err2_1.47.1-1+b1 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libcurl3t64-gnutls_8.10.1-2 libcurl4-gnutls-dev_8.10.1-2 libcurl4t64_8.10.1-2 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.273 libdebhelper-perl_13.20 libdeflate-dev_1.22-1 libdeflate0_1.22-1 libdpkg-perl_1.22.11 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.6.3-2 libext2fs2t64_1.47.1-1+b1 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-14-dev_14.2.0-8 libgcc-14-dev-ppc64el-cross_14.2.0-6cross1 libgcc-s1_14.2.0-8 libgcc-s1-ppc64el-cross_14.2.0-6cross1 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgfortran5_14.2.0-8 libgmp-dev_2:6.3.0+dfsg-2+b2 libgmp10_2:6.3.0+dfsg-2+b2 libgmpxx4ldbl_2:6.3.0+dfsg-2+b2 libgnutls-dane0t64_3.8.6-2+b1 libgnutls-openssl27t64_3.8.6-2+b1 libgnutls28-dev_3.8.6-2+b1 libgnutls30t64_3.8.6-2+b1 libgomp1_14.2.0-8 libgomp1-ppc64el-cross_14.2.0-6cross1 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libgssapi-krb5-2_1.21.3-3 libgtest-dev_1.15.2-1 libhdf5-103-1t64_1.10.10+repack-4 libhdf5-cpp-103-1t64_1.10.10+repack-4 libhdf5-dev_1.10.10+repack-4 libhdf5-fortran-102t64_1.10.10+repack-4 libhdf5-hl-100t64_1.10.10+repack-4 libhdf5-hl-cpp-100t64_1.10.10+repack-4 libhdf5-hl-fortran-100t64_1.10.10+repack-4 libhogweed6t64_3.10-1+b1 libhts-dev_1.20+ds-2 libhts3t64_1.20+ds-2 libhtscodecs2_1.6.1-1 libhwasan0_14.2.0-8 libicu72_72.1-5+b1 libidn2-0_2.3.7-2+b1 libidn2-dev_2.3.7-2+b1 libisl23_0.27-1 libitm1_14.2.0-8 libitm1-ppc64el-cross_14.2.0-6cross1 libjansson4_2.14-2+b3 libjpeg-dev_1:2.1.5-3+b1 libjpeg62-turbo_1:2.1.5-3+b1 libjpeg62-turbo-dev_1:2.1.5-3+b1 libjsoncpp26_1.9.6-2 libk5crypto3_1.21.3-3 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-3 libkrb5support0_1.21.3-3 libldap-2.5-0_2.5.18+dfsg-3+b1 liblsan0_14.2.0-8 liblsan0-ppc64el-cross_14.2.0-6cross1 liblz4-1_1.9.4-3+b1 liblzma-dev_5.6.3-1+b1 liblzma5_5.6.3-1+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmd0_1.1.0-2+b1 libmount1_2.40.2-9 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libncursesw6_6.5-2+b1 libnettle8t64_3.10-1+b1 libnghttp2-14_1.64.0-1 libnghttp2-dev_1.64.0-1 libnghttp3-9_1.4.0-1+b1 libnghttp3-dev_1.4.0-1+b1 libngtcp2-16_1.6.0-1 libngtcp2-crypto-gnutls-dev_1.6.0-1 libngtcp2-crypto-gnutls8_1.6.0-1 libngtcp2-dev_1.6.0-1 libnsl2_1.3.0-3+b3 libp11-kit-dev_0.25.5-2+b1 libp11-kit0_0.25.5-2+b1 libpam-modules_1.5.3-7+b1 libpam-modules-bin_1.5.3-7+b1 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7+b1 libpbbam-dev_2.4.0+dfsg-1+b4 libpbbam2.4.0_2.4.0+dfsg-1+b4 libpbcopper-dev_2.3.0+dfsg-2+b1 libpbcopper2.3.0_2.3.0+dfsg-2+b1 libpbdata-dev_5.3.5+dfsg-8 libpbihdf-dev_5.3.5+dfsg-8 libpbseq-dev_5.3.5+dfsg-8 libpcre2-8-0_10.42-4+b2 libperl5.40_5.40.0-6 libpipeline1_1.5.8-1 libpkgconf3_1.8.1-4 libproc2-0_2:4.0.4-6 libpsl-dev_0.21.2-1.1+b1 libpsl5t64_0.21.2-1.1+b1 libpython3-stdlib_3.12.6-1 libpython3.12-minimal_3.12.7-1 libpython3.12-stdlib_3.12.7-1 libquadmath0_14.2.0-8 libquadmath0-ppc64el-cross_14.2.0-6cross1 libreadline8t64_8.2-5 librhash1_1.4.5-1 librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5 librtmp1_2.4+20151223.gitfa8646d.1-2+b5 libsasl2-2_2.1.28+dfsg1-8 libsasl2-modules-db_2.1.28+dfsg1-8 libseccomp2_2.5.5-1+b2 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsframe1_2.43.1-5 libsmartcols1_2.40.2-9 libsqlite3-0_3.46.1-1 libss2_1.47.1-1+b1 libssh2-1-dev_1.11.1-1 libssh2-1t64_1.11.1-1 libssl-dev_3.3.2-2 libssl3t64_3.3.2-2 libstdc++-14-dev_14.2.0-8 libstdc++-14-dev-ppc64el-cross_14.2.0-6cross1 libstdc++6_14.2.0-8 libstdc++6-ppc64el-cross_14.2.0-6cross1 libsystemd0_256.7-3 libsz2_1.1.3-1+b1 libtasn1-6_4.19.0-3+b3 libtasn1-6-dev_4.19.0-3+b3 libtinfo6_6.5-2+b1 libtirpc-common_1.3.4+ds-1.3 libtirpc3t64_1.3.4+ds-1.3+b1 libtool_2.4.7-8 libtsan2_14.2.0-8 libtsan2-ppc64el-cross_14.2.0-6cross1 libubsan1_14.2.0-8 libubsan1-ppc64el-cross_14.2.0-6cross1 libuchardet0_0.0.8-1+b2 libudev1_256.7-3 libunbound8_1.22.0-1 libunistring5_1.2-1+b1 libuuid1_2.40.2-9 libuv1t64_1.48.0-6 libxml2_2.12.7+dfsg+really2.9.14-0.1 libxxhash0_0.8.2-2+b2 libzstd-dev_1.5.6+dfsg-1+b1 libzstd1_1.5.6+dfsg-1+b1 linux-libc-dev_6.11.5-1 linux-libc-dev-ppc64el-cross_6.11.2-1cross1 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 logsave_1.47.1-1+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 media-types_10.1.0 meson_1.6.0-1 mount_2.40.2-9 ncurses-base_6.5-2 ncurses-bin_6.5-2+b1 netbase_6.4 nettle-dev_3.10-1+b1 ninja-build_1.12.1-1 openssl-provider-legacy_3.3.2-2 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.40.0-6 perl-base_5.40.0-6 perl-modules-5.40_5.40.0-6 pkg-config_1.8.1-4 pkgconf_1.8.1-4 pkgconf-bin_1.8.1-4 po-debconf_1.0.21+nmu1 procps_2:4.0.4-6 python3_3.12.6-1 python3-autocommand_2.2.2-3 python3-inflect_7.3.1-2 python3-jaraco.context_6.0.0-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.12.6-1 python3-more-itertools_10.5.0-1 python3-pkg-resources_75.2.0-1 python3-setuptools_75.2.0-1 python3-typeguard_4.4.0-1 python3-typing-extensions_4.12.2-2 python3-zipp_3.20.2-1 python3.12_3.12.7-1 python3.12-minimal_3.12.7-1 readline-common_8.2-5 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.11-1 tar_1.35+dfsg-3 tzdata_2024b-3 util-linux_2.40.2-9 xz-utils_5.6.3-1+b1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: blasr Binary: blasr Architecture: any Version: 5.3.5+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/PacificBiosciences/blasr Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/blasr Vcs-Git: https://salsa.debian.org/med-team/blasr.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), python3:any, meson, cmake, pkg-config, libboost-dev, libhdf5-dev, zlib1g-dev, libpbseq-dev, libpbbam-dev, libpbdata-dev, libpbcopper-dev, libgtest-dev, libblasr-dev (>= 5.3.4+dfsg-4~) Package-List: blasr deb science optional arch=any Checksums-Sha1: 334132438305cfaf3d7ee6208bcb4cc4b493be5d 124460 blasr_5.3.5+dfsg.orig.tar.xz b8b0fcc647de7296fde6a6b8a582fae9250330dc 11372 blasr_5.3.5+dfsg-6.debian.tar.xz Checksums-Sha256: 765ac47ae74f56e3bee17e2a3c81d404faf7419e42eb45bc9f2a71c7a5942205 124460 blasr_5.3.5+dfsg.orig.tar.xz f58acead9b46bf4c8dfd6024a9a910e7b8d90a025a4d8f37e90cc09d771347f9 11372 blasr_5.3.5+dfsg-6.debian.tar.xz Files: 46c888e8f9c606d840b0d9dcc8036b21 124460 blasr_5.3.5+dfsg.orig.tar.xz 16e74314d32ec0e1adf067350e7e3deb 11372 blasr_5.3.5+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOOS70RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHrpg/+IDTznxGk4L52o+/s16GCsASLtd4+hwdS wefVHnctlkSCm4/i6jB7l8E9xt9bKYJuEdhmcfoRSC+SGhuhEtsAi/kTKatDqLrD yAJGL0CN8vD10E4fQ/3xmKjuMxxtlD3/Y/i30H6ApVz57566Vnn5LyWCMVpxH5Xm YAAP28oLNhtUAmtDzguzvZXHvqOMATRCULf+I34Pb1JUuv7rToKPoQZUUaU1P3hC FUsAmo+92JT+1cByIE6u1ast6LSYCCGnaaGABdC8WFrK07d5TDOPV3VueTkca6gf WrH3AT8YoxBU5fwWKHxSL6y/HftkLrn/pV5pesenfcMKjrY+5kB9e0f+efqFFaxv KXGp2JstV4DosCw+jKHc9XGOBcWYzAx2gEsJH7qNbe7Q4oN21iSAbELop5vokfpF C5BYnttFgVB/W2wnxzcCdHOMvkU+szPnQT99cZBS/DKscUVoWq/a8L3wNrymxBbI 570F0HHm9Sh9BeXEmoncsIVTx35/5LULxZ70aj6HY/3IX06XFtj0dSBtvK7Vctzw 73TtrQ2cqs+ObbNFcc64VmwoOZlTXqTJFhPdS75pQqPvTc4PUG4v+IPngA0Tx1No 44v3t8ujFkGCBUVH1IhZxYz620ArMuKv8KKDI9TwvxVbsyCFdM31izUlHwXrgx/e NRxY1BCl/Yk= =5U9f -----END PGP SIGNATURE----- gpgv: Signature made Mon Dec 5 19:51:25 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./blasr_5.3.5+dfsg-6.dsc: no acceptable signature found dpkg-source: info: extracting blasr in /<> dpkg-source: info: unpacking blasr_5.3.5+dfsg.orig.tar.xz dpkg-source: info: unpacking blasr_5.3.5+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_pblibs.patch dpkg-source: info: applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.t2HrzScxIU/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-e00d5ce5-330e-4ca0-bb4b-01fe453d2311 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package blasr dpkg-buildpackage: info: source version 5.3.5+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --buildsystem=meson dh_auto_clean -O--buildsystem=meson dh_autoreconf_clean -O--buildsystem=meson dh_clean -O--buildsystem=meson debian/rules binary-arch dh binary-arch --buildsystem=meson dh_update_autotools_config -a -O--buildsystem=meson dh_autoreconf -a -O--buildsystem=meson debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' LDFLAGS="-L/usr/lib/powerpc64le-linux-gnu -L/usr/lib/powerpc64le-linux-gnu/hdf5/serial -lhdf5_cpp -lhdf5 -Wl,-z,relro" CPPFLAGS="-isystem /usr/include/hdf5/serial" dh_auto_configure -- -Dtests=false cd obj-powerpc64le-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/powerpc64le-linux-gnu -Dpython.bytecompile=-1 --cross-file /<>/blasr-5.3.5\+dfsg/debian/.debhelper/generated/_source/meson-cross-file.conf -Dtests=false DEPRECATION: "pkgconfig" entry is deprecated and should be replaced by "pkg-config" DEPRECATION: c_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: c_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. The Meson build system Version: 1.6.0 Source dir: /<> Build dir: /<>/obj-powerpc64le-linux-gnu Build type: cross build Project name: blasr Project version: 5.3.5 C++ compiler for the host machine: /usr/bin/powerpc64le-linux-gnu-g++ (gcc 14.2.0 "powerpc64le-linux-gnu-g++ (Debian 14.2.0-6) 14.2.0") C++ linker for the host machine: /usr/bin/powerpc64le-linux-gnu-g++ ld.bfd 2.43.1 C++ compiler for the build machine: c++ (gcc 14.2.0 "c++ (Debian 14.2.0-8) 14.2.0") C++ linker for the build machine: c++ ld.bfd 2.43.1 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: ppc64 Host machine cpu: ppc64el Target machine cpu family: ppc64 Target machine cpu: ppc64el Compiler for C++ supports arguments -Wno-delete-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Run-time dependency threads found: YES Found pkg-config: YES (/usr/bin/powerpc64le-linux-gnu-pkg-config) 1.8.1 Run-time dependency Boost found: YES 1.83.0 (/usr/include) Library pbbam found: YES Run-time dependency libblasr found: YES 5.3.5 Run-time dependency zlib found: YES 1.3.1 Run-time dependency htslib found: YES 1.20 Library pbcopper found: YES Configuring BlasrVersion.h using configuration Build targets in project: 5 blasr 5.3.5 User defined options Cross files : /<>/debian/.debhelper/generated/_source/meson-cross-file.conf buildtype : plain libdir : lib/powerpc64le-linux-gnu localstatedir : /var prefix : /usr python.bytecompile: -1 sysconfdir : /etc tests : false wrap_mode : nodownload Found ninja-1.12.1 at /usr/bin/ninja make[1]: Leaving directory '/<>' dh_auto_build -a -O--buildsystem=meson cd obj-powerpc64le-linux-gnu && LC_ALL=C.UTF-8 ninja -j1 -v [1/25] /usr/bin/meson --internal vcstagger ../BlasrGitHash.h.in BlasrGitHash.h 5.3.5 /<> @BLASR_GIT_SHA1@ '(.*)' git describe --always '--dirty=*' [2/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_SuffixArrayToBWT.cpp.o -MF libblasr_impl.a.p/extrautils_SuffixArrayToBWT.cpp.o.d -o libblasr_impl.a.p/extrautils_SuffixArrayToBWT.cpp.o -c ../extrautils/SuffixArrayToBWT.cpp In file included from ../extrautils/SuffixArrayToBWT.cpp:4: /usr/include/pbseq/alignment/bwt/BWT.hpp: In member function ‘void Bwt::InitializeDNACharacterCount() [with T_BWT_Sequence = PackedDNASequence; T_DNASequence = FASTASequence]’: /usr/include/pbseq/alignment/bwt/BWT.hpp:192:21: warning: this statement may fall through [-Wimplicit-fallthrough=] 192 | charCount[0]++; | ^~~~~~~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:193:17: note: here 193 | case 0: //A | ^~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:194:21: warning: this statement may fall through [-Wimplicit-fallthrough=] 194 | charCount[1]++; | ^~~~~~~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:195:17: note: here 195 | case 1: //C | ^~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:196:21: warning: this statement may fall through [-Wimplicit-fallthrough=] 196 | charCount[2]++; | ^~~~~~~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:197:17: note: here 197 | case 2: //G | ^~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:198:21: warning: this statement may fall through [-Wimplicit-fallthrough=] 198 | charCount[3]++; | ^~~~~~~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:199:17: note: here 199 | case 3: //T | ^~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:200:21: warning: this statement may fall through [-Wimplicit-fallthrough=] 200 | charCount[4]++; | ^~~~~~~~~ /usr/include/pbseq/alignment/bwt/BWT.hpp:201:17: note: here 201 | case 4: //N | ^~~~ [3/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_BwtToSuffixArray.cpp.o -MF libblasr_impl.a.p/extrautils_BwtToSuffixArray.cpp.o.d -o libblasr_impl.a.p/extrautils_BwtToSuffixArray.cpp.o -c ../extrautils/BwtToSuffixArray.cpp [4/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_SWMatcher.cpp.o -MF libblasr_impl.a.p/extrautils_SWMatcher.cpp.o.d -o libblasr_impl.a.p/extrautils_SWMatcher.cpp.o -c ../extrautils/SWMatcher.cpp In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from ../extrautils/SWMatcher.cpp:6: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../extrautils/SWMatcher.cpp:2: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [5/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_SAModify.cpp.o -MF libblasr_impl.a.p/extrautils_SAModify.cpp.o.d -o libblasr_impl.a.p/extrautils_SAModify.cpp.o -c ../extrautils/SAModify.cpp [6/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_ExciseRepeats.cpp.o -MF libblasr_impl.a.p/extrautils_ExciseRepeats.cpp.o.d -o libblasr_impl.a.p/extrautils_ExciseRepeats.cpp.o -c ../extrautils/ExciseRepeats.cpp [7/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_StoreQualityByContextFromCmpH5.cpp.o -MF libblasr_impl.a.p/extrautils_StoreQualityByContextFromCmpH5.cpp.o.d -o libblasr_impl.a.p/extrautils_StoreQualityByContextFromCmpH5.cpp.o -c ../extrautils/StoreQualityByContextFromCmpH5.cpp In file included from /usr/include/pbseq/hdf/DatasetCollection.hpp:9, from /usr/include/pbseq/hdf/HDFBasReader.hpp:11, from /usr/include/pbseq/alignment/files/ReaderAgglomerate.hpp:8, from ../extrautils/StoreQualityByContextFromCmpH5.cpp:2: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFBasReader.hpp:12: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray >’: /usr/include/pbseq/hdf/HDF2DArray.hpp:7:7: required from ‘class HDF2DArray >’ 7 | class HDF2DArray : public BufferedHDF2DArray | ^~~~~~~~~~ /usr/include/pbseq/hdf/HDFCmpRootGroup.hpp:17:29: required from here 17 | HDF2DArray fileLog; | ^~~~~~~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:156: /usr/include/pbseq/hdf/BufferedHDF2DArrayImpl.hpp:70:5: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 70 | int BufferedHDF2DArray::Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength, | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from /usr/include/pbseq/alignment/format/StickAlignmentPrinter.hpp:8, from ../extrautils/StoreQualityByContextFromCmpH5.cpp:3: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/vector:63, from /usr/include/pbseq/alignment/datastructures/alignment/CmpFile.hpp:4, from ../extrautils/StoreQualityByContextFromCmpH5.cpp:1: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [8/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_SALS.cpp.o -MF libblasr_impl.a.p/extrautils_SALS.cpp.o.d -o libblasr_impl.a.p/extrautils_SALS.cpp.o -c ../extrautils/SALS.cpp [9/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_SimpleShredder.cpp.o -MF libblasr_impl.a.p/extrautils_SimpleShredder.cpp.o.d -o libblasr_impl.a.p/extrautils_SimpleShredder.cpp.o -c ../extrautils/SimpleShredder.cpp [10/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_Evolve.cpp.o -MF libblasr_impl.a.p/extrautils_Evolve.cpp.o.d -o libblasr_impl.a.p/extrautils_Evolve.cpp.o -c ../extrautils/Evolve.cpp [11/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_BuildSequenceDB.cpp.o -MF libblasr_impl.a.p/extrautils_BuildSequenceDB.cpp.o.d -o libblasr_impl.a.p/extrautils_BuildSequenceDB.cpp.o -c ../extrautils/BuildSequenceDB.cpp [12/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/extrautils_PrintTupleCountTable.cpp.o -MF libblasr_impl.a.p/extrautils_PrintTupleCountTable.cpp.o.d -o libblasr_impl.a.p/extrautils_PrintTupleCountTable.cpp.o -c ../extrautils/PrintTupleCountTable.cpp [13/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_SamToM4.cpp.o -MF libblasr_impl.a.p/utils_SamToM4.cpp.o.d -o libblasr_impl.a.p/utils_SamToM4.cpp.o -c ../utils/SamToM4.cpp In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from ../utils/SamToM4.cpp:21: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../utils/SamToM4.cpp:19: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [14/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_SamToCmpH5.cpp.o -MF libblasr_impl.a.p/utils_SamToCmpH5.cpp.o.d -o libblasr_impl.a.p/utils_SamToCmpH5.cpp.o -c ../utils/SamToCmpH5.cpp In file included from /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:12, from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFCmpFile.hpp:11, from /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp:7, from ../utils/SamToCmpH5.cpp:5: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray >’: /usr/include/pbseq/hdf/HDF2DArray.hpp:7:7: required from ‘class HDF2DArray >’ 7 | class HDF2DArray : public BufferedHDF2DArray | ^~~~~~~~~~ /usr/include/pbseq/hdf/HDFCmpRootGroup.hpp:17:29: required from here 17 | HDF2DArray fileLog; | ^~~~~~~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:156: /usr/include/pbseq/hdf/BufferedHDF2DArrayImpl.hpp:70:5: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 70 | int BufferedHDF2DArray::Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength, | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/AlignmentCandidate.hpp:6, from ../utils/SamToCmpH5.cpp:3: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../utils/SamToCmpH5.cpp:1: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp:79: /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp: In instantiation of ‘unsigned int AlignmentSetToCmpH5Adapter::StoreRefGroup(std::string, T_CmpFile&) [with T_CmpFile = HDFCmpFile >; std::string = std::__cxx11::basic_string]’: /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp:136:31: required from ‘void AlignmentSetToCmpH5Adapter::StoreAlignmentCandidate(AlignmentCandidate<>&, int, T_CmpFile&, int, bool) [with T_CmpFile = HDFCmpFile >]’ 136 | unsigned int refGroupId = StoreRefGroup(alignment.tName, cmpFile); | ^~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp:246:32: required from ‘void AlignmentSetToCmpH5Adapter::StoreAlignmentCandidateList(std::vector >&, T_CmpFile&, int, bool) [with T_CmpFile = HDFCmpFile >]’ 246 | StoreAlignmentCandidate(alignments[a], a, cmpFile, moleculeNumber, copyQVs); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../utils/SamToCmpH5.cpp:199:56: required from here 199 | alignmentSetAdapter.StoreAlignmentCandidateList(convertedAlignments, cmpFile, -1, copyQVs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5AdapterImpl.hpp:64:86: warning: implicitly-declared ‘RefGroupNameId& RefGroupNameId::operator=(const RefGroupNameId&)’ is deprecated [-Wdeprecated-copy] 64 | refNameToRefGroupNameandId[refName] = RefGroupNameId(refGroupName, refGroupId); | ^ /usr/include/pbseq/alignment/datastructures/alignmentset/AlignmentSetToCmpH5Adapter.hpp:28:5: note: because ‘RefGroupNameId’ has user-provided ‘RefGroupNameId::RefGroupNameId(const RefGroupNameId&)’ 28 | RefGroupNameId(const RefGroupNameId &rhs) | ^~~~~~~~~~~~~~ [15/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_SDPMatcher.cpp.o -MF libblasr_impl.a.p/utils_SDPMatcher.cpp.o.d -o libblasr_impl.a.p/utils_SDPMatcher.cpp.o -c ../utils/SDPMatcher.cpp In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from ../utils/SDPMatcher.cpp:8: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../utils/SDPMatcher.cpp:3: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [16/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_LoadPulses.cpp.o -MF libblasr_impl.a.p/utils_LoadPulses.cpp.o.d -o libblasr_impl.a.p/utils_LoadPulses.cpp.o -c ../utils/LoadPulses.cpp In file included from /usr/include/pbseq/hdf/DatasetCollection.hpp:9, from /usr/include/pbseq/hdf/HDFBasReader.hpp:11, from ../utils/LoadPulses.cpp:16: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFBasReader.hpp:12: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray >’: /usr/include/pbseq/hdf/HDF2DArray.hpp:7:7: required from ‘class HDF2DArray >’ 7 | class HDF2DArray : public BufferedHDF2DArray | ^~~~~~~~~~ /usr/include/pbseq/hdf/HDFCmpRootGroup.hpp:17:29: required from here 17 | HDF2DArray fileLog; | ^~~~~~~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:156: /usr/include/pbseq/hdf/BufferedHDF2DArrayImpl.hpp:70:5: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 70 | int BufferedHDF2DArray::Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength, | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from /usr/include/pbseq/alignment/datastructures/alignment/ByteAlignment.h:6, from ../utils/LoadPulses.cpp:11: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_tree.h:64, from /usr/powerpc64le-linux-gnu/include/c++/14/map:62, from ../utils/LoadPulses.cpp:6: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [17/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_PulseToFasta.cpp.o -MF libblasr_impl.a.p/utils_PulseToFasta.cpp.o.d -o libblasr_impl.a.p/utils_PulseToFasta.cpp.o -c ../utils/PulseToFasta.cpp In file included from /usr/include/pbseq/hdf/DatasetCollection.hpp:9, from /usr/include/pbseq/hdf/HDFBasReader.hpp:11, from /usr/include/pbseq/alignment/files/ReaderAgglomerate.hpp:8, from ../utils/PulseToFasta.cpp:5: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFBasReader.hpp:12: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ [18/25] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibblasr_impl.a.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -fPIC -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -MD -MQ libblasr_impl.a.p/utils_SamFilter.cpp.o -MF libblasr_impl.a.p/utils_SamFilter.cpp.o.d -o libblasr_impl.a.p/utils_SamFilter.cpp.o -c ../utils/SamFilter.cpp In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from ../utils/SamFilter.cpp:32: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../utils/SamFilter.cpp:29: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [19/25] rm -f libblasr_impl.a && /usr/bin/powerpc64le-linux-gnu-ar csrDT libblasr_impl.a libblasr_impl.a.p/extrautils_SuffixArrayToBWT.cpp.o libblasr_impl.a.p/extrautils_BwtToSuffixArray.cpp.o libblasr_impl.a.p/extrautils_SWMatcher.cpp.o libblasr_impl.a.p/extrautils_SAModify.cpp.o libblasr_impl.a.p/extrautils_ExciseRepeats.cpp.o libblasr_impl.a.p/extrautils_StoreQualityByContextFromCmpH5.cpp.o libblasr_impl.a.p/extrautils_SALS.cpp.o libblasr_impl.a.p/extrautils_SimpleShredder.cpp.o libblasr_impl.a.p/extrautils_Evolve.cpp.o libblasr_impl.a.p/extrautils_BuildSequenceDB.cpp.o libblasr_impl.a.p/extrautils_PrintTupleCountTable.cpp.o libblasr_impl.a.p/utils_SamToM4.cpp.o libblasr_impl.a.p/utils_SamToCmpH5.cpp.o libblasr_impl.a.p/utils_SDPMatcher.cpp.o libblasr_impl.a.p/utils_LoadPulses.cpp.o libblasr_impl.a.p/utils_PulseToFasta.cpp.o libblasr_impl.a.p/utils_SamFilter.cpp.o [20/25] /usr/bin/powerpc64le-linux-gnu-g++ -Iblasr.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -DCMAKE_BUILD=1 -MD -MQ blasr.p/Blasr.cpp.o -MF blasr.p/Blasr.cpp.o.d -o blasr.p/Blasr.cpp.o -c ../Blasr.cpp In file included from /usr/include/pbseq/alignment/algorithms/anchoring/FindMaxInterval.hpp:16, from ../iblasr/BlasrHeaders.h:44, from ../iblasr/BlasrAlign.hpp:4, from ../Blasr.cpp:3: /usr/include/pbseq/alignment/statistics/VarianceAccumulator.hpp:14:27: warning: template-id not allowed for constructor in C++20 [-Wtemplate-id-cdtor] 14 | VarianceAccumulator(); | ^ /usr/include/pbseq/alignment/statistics/VarianceAccumulator.hpp:14:27: note: remove the ‘< >’ In file included from ../iblasr/BlasrHeaders.h:57: /usr/include/pbseq/alignment/files/CCSIterator.hpp:13:18: warning: ‘virtual void CCSIterator::Initialize(CCSSequence*)’ was hidden [-Woverloaded-virtual=] 13 | virtual void Initialize(CCSSequence *_seqPtr); | ^~~~~~~~~~ In file included from ../iblasr/BlasrHeaders.h:58: /usr/include/pbseq/alignment/files/FragmentCCSIterator.hpp:17:18: note: by ‘virtual void FragmentCCSIterator::Initialize(CCSSequence*, RegionTable*)’ 17 | virtual void Initialize(CCSSequence *_seqPtr, RegionTable *_regionTablePtr); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/DatasetCollection.hpp:9, from /usr/include/pbseq/hdf/HDFBasReader.hpp:11, from /usr/include/pbseq/alignment/files/ReaderAgglomerate.hpp:8, from ../iblasr/BlasrHeaders.h:59: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFBasReader.hpp:12: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ In file included from ../iblasr/BlasrMiscs.hpp:56, from ../iblasr/BlasrAlign.hpp:5: ../iblasr/BlasrMiscsImpl.hpp: In function ‘void MakeSubreadIntervals(std::vector&, std::vector&)’: ../iblasr/BlasrMiscsImpl.hpp:136:25: warning: implicitly-declared ‘SMRTSequence::SMRTSequence(const SMRTSequence&)’ is deprecated [-Wdeprecated-copy] 136 | for (auto subread : subreads) { | ^~~~~~~~ In file included from /usr/include/pbseq/pbdata/CCSSequence.hpp:5, from /usr/include/pbseq/alignment/files/CCSIterator.hpp:4: /usr/include/pbseq/pbdata/SMRTSequence.hpp:171:19: note: because ‘SMRTSequence’ has user-provided ‘SMRTSequence& SMRTSequence::operator=(const SMRTSequence&)’ 171 | SMRTSequence &operator=(const SMRTSequence &rhs); | ^~~~~~~~ In file included from ../iblasr/MappingIPC.h:5, from ../iblasr/BlasrHeaders.h:99: ../iblasr/MappingParameters.h: In copy constructor ‘MappingParameters::MappingParameters(const MappingParameters&)’: ../iblasr/MappingParameters.h:19:7: warning: implicitly-declared ‘constexpr AnchorParameters::AnchorParameters(const AnchorParameters&)’ is deprecated [-Wdeprecated-copy] 19 | class MappingParameters | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/algorithms/anchoring/BWTSearch.hpp:7, from ../iblasr/BlasrHeaders.h:42: /usr/include/pbseq/alignment/datastructures/anchoring/AnchorParameters.hpp:33:23: note: because ‘AnchorParameters’ has user-provided ‘AnchorParameters& AnchorParameters::operator=(const AnchorParameters&)’ 33 | AnchorParameters &operator=(const AnchorParameters &rhs); | ^~~~~~~~ ../Blasr.cpp: In function ‘void MapReadsNonCCS(MappingData >, FASTASequence, DNATuple>*, MappingBuffers&, SMRTSequence&, SMRTSequence&, std::vector&, MappingParameters&, const int&, ReadAlignments&, std::ofstream&)’: ../Blasr.cpp:382:49: note: synthesized method ‘MappingParameters::MappingParameters(const MappingParameters&)’ first required here 382 | MappingParameters sensitiveParams = params; | ^~~~~~ ../Blasr.cpp: In function ‘int main(int, char**)’: ../Blasr.cpp:1407:32: warning: cast between incompatible function types from ‘void (*)(MappingData >, FASTASequence, DNATuple>*)’ to ‘void* (*)(void*)’ [-Wcast-function-type] 1407 | (void *(*)(void *))MapReads, &mapdb[procIndex]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/pbseq/alignment/format/BAMPrinter.hpp:29, from ../iblasr/BlasrHeaders.h:60: /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp: In instantiation of ‘void AlignmentToBamRecord(T_AlignmentCandidate&, T_Sequence&, T_Sequence&, PacBio::BAM::BamRecord&, AlignmentContext&, SupplementalQVList&, SAMOutput::Clipping, bool, bool) [with T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’: /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp:170:25: required from ‘void BAMOutput::PrintAlignment(T_AlignmentCandidate&, T_Sequence&, T_Sequence&, PacBio::BAM::IRecordWriter&, AlignmentContext&, SupplementalQVList&, SAMOutput::Clipping, bool, bool) [with T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 170 | AlignmentToBamRecord(alignment, read, subread, bamRecord, context, qvList, clipping, | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 | cigarUseSeqMatch, allowAdjacentIndels); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:951:38: required from here 951 | BAMOutput::PrintAlignment(alignment, fullRead, subread, *bamWriterPtr, alignmentContext, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 | params.samQVList, params.clipping, params.cigarUseSeqMatch, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 | params.allowAdjacentIndels); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp:30:45: warning: the compiler can assume that the address of ‘read’ will never be NULL [-Waddress] 30 | if (dynamic_cast(&read) == NULL) { | ^ /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp:19:72: note: ‘read’ declared here 19 | void AlignmentToBamRecord(T_AlignmentCandidate &alignment, T_Sequence &read, T_Sequence &subread, | ~~~~~~~~~~~~^~~~ In file included from /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtils.hpp:7, from /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:11, from /usr/include/pbseq/alignment/algorithms/alignment/AffineGuidedAlign.hpp:4, from ../iblasr/BlasrHeaders.h:30: /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp: In instantiation of ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment]’: /usr/powerpc64le-linux-gnu/include/c++/14/bits/alloc_traits.h:569:17: required from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = blasr::CompSeqAlignment; _Args = {const blasr::CompSeqAlignment&}; _Tp = blasr::CompSeqAlignment; allocator_type = std::allocator]’ 569 | __a.construct(__p, std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/14/bits/stl_vector.h:1288:30: required from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = blasr::CompSeqAlignment; _Alloc = std::allocator; value_type = blasr::CompSeqAlignment]’ 1288 | _Alloc_traits::construct(this->_M_impl, this->_M_impl._M_finish, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1289 | __x); | ~~~~ /usr/include/pbseq/alignment/algorithms/alignment/AlignmentUtilsImpl.hpp:112:29: required from here 112 | alignments.push_back(alignment); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: warning: implicitly-declared ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ is deprecated [-Wdeprecated-copy] 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:103:16: note: because ‘blasr::Alignment’ has user-provided ‘blasr::Alignment& blasr::Alignment::operator=(const blasr::Alignment&)’ 103 | Alignment &operator=(const Alignment &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:58:7: warning: implicitly-declared ‘constexpr blasr::AlignmentStats::AlignmentStats(const blasr::AlignmentStats&)’ is deprecated [-Wdeprecated-copy] 58 | class Alignment : public AlignmentStats | ^~~~~~~~~ In file included from /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:8: /usr/include/pbseq/alignment/datastructures/alignment/AlignmentStats.hpp:19:21: note: because ‘blasr::AlignmentStats’ has user-provided ‘blasr::AlignmentStats& blasr::AlignmentStats::operator=(const blasr::AlignmentStats&)’ 19 | AlignmentStats &operator=(const AlignmentStats &rhs); | ^~~~~~~~ /usr/include/pbseq/alignment/datastructures/alignment/Alignment.hpp:209:7: note: synthesized method ‘blasr::Alignment::Alignment(const blasr::Alignment&)’ first required here 209 | class CompSeqAlignment : public Alignment | ^~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/powerpc64le-linux-gnu/bits/c++allocator.h:33, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/powerpc64le-linux-gnu/include/c++/14/string:43, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/14/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/14/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/14/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/14/iostream:41, from ../iblasr/BlasrHeaders.h:10: /usr/powerpc64le-linux-gnu/include/c++/14/bits/new_allocator.h:191:11: note: synthesized method ‘blasr::CompSeqAlignment::CompSeqAlignment(const blasr::CompSeqAlignment&)’ first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/cassert:44, from /usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgrammingImpl.hpp:5, from /usr/include/pbseq/alignment/algorithms/alignment/sdp/SparseDynamicProgramming.hpp:35, from /usr/include/pbseq/alignment/algorithms/alignment/SDPAlignImpl.hpp:18, from /usr/include/pbseq/alignment/algorithms/alignment/SDPAlign.hpp:44, from /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:13: /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp: In instantiation of ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, blasr::Alignment&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, AlignmentType, bool) [with QSequence = SMRTSequence; TSequence = DNASequence; T_ScoreFn = IDSScoreFunction]’: /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:526:23: required from ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, T_BufferCache&, blasr::Alignment&, AlignmentType, bool) [with QSequence = SMRTSequence; TSequence = DNASequence; T_ScoreFn = IDSScoreFunction; T_BufferCache = MappingBuffers]’ 526 | return GuidedAlign(origQSeq, origTSeq, guideAlignment, scoreFn, bandSize, alignment, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 | buffers.scoreMat, buffers.pathMat, buffers.probMat, buffers.optPathProbMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 | buffers.lnSubPValueMat, buffers.lnInsPValueMat, buffers.lnDelPValueMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 | buffers.lnMatchPValueMat, alignType, computeProb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:512:23: required from ‘int GuidedAlign(QSequence&, TSequence&, T_ScoreFn&, int, int, int, float, T_BufferCache&, blasr::Alignment&, AlignmentType, bool, int) [with QSequence = SMRTSequence; TSequence = DNASequence; T_ScoreFn = IDSScoreFunction; T_BufferCache = MappingBuffers]’ 512 | return GuidedAlign(origQSeq, origTSeq, sdpAlignment, scoreFn, bandSize, buffers, alignment, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 | // fill in optional parameters | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 | alignType, computeProb); | ~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1449:20: required from here 1449 | GuidedAlign(alignedRead, alignedRefSequence, idsScoreFn, 12, params.sdpIns, params.sdpDel, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1450 | params.indelRate, mappingBuffers, exploded, Local, computeProbIsFalse, 6); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:97:24: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 97 | assert(matrixNElem >= 0); | ~~~~~~~~~~~~^~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/14/cassert:44, from /usr/include/pbseq/alignment/statistics/StatUtils.hpp:5, from /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:12, from /usr/include/pbseq/alignment/algorithms/alignment/AffineKBandAlign.hpp:9, from ../iblasr/BlasrHeaders.h:31: /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp: In instantiation of ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, AlignmentType, T_ScoreFn&, bool) [with T_QuerySequence = SMRTSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = IDSScoreFunction; DNALength = unsigned int]’: /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:30:22: required from ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, T_ScoreFn&, AlignmentType, bool) [with T_QuerySequence = SMRTSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = IDSScoreFunction; DNALength = unsigned int]’ 30 | return KBandAlign(pqSeq, ptSeq, matchMat, ins, del, k, scoreMat, pathMat, alignment, alignType, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | scoreFn, samplePaths); | ~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:639:19: required from ‘void RefineAlignment(std::vector&, T_RefSequence&, T_AlignmentCandidate&, MappingParameters&, MappingBuffers&) [with T_RefSequence = DNASequence; T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 639 | KBandAlign(subread, alignmentCandidate.tAlignedSeq, SMRTDistanceMatrix, params.insertion, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 | params.deletion, drift, mappingBuffers.scoreMat, mappingBuffers.pathMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 | refinedAlignment, idsScoreFn, Global); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1555:32: required from here 1555 | RefineAlignment(vquery, alignedRefSequence, exploded, params, mappingBuffers); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:151:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 151 | assert(t - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:152:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 152 | assert(q - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp: In instantiation of ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, blasr::Alignment&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, AlignmentType, bool) [with QSequence = FASTQSequence; TSequence = DNASequence; T_ScoreFn = IDSScoreFunction]’: /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:526:23: required from ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, T_BufferCache&, blasr::Alignment&, AlignmentType, bool) [with QSequence = FASTQSequence; TSequence = DNASequence; T_ScoreFn = IDSScoreFunction; T_BufferCache = MappingBuffers]’ 526 | return GuidedAlign(origQSeq, origTSeq, guideAlignment, scoreFn, bandSize, alignment, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 | buffers.scoreMat, buffers.pathMat, buffers.probMat, buffers.optPathProbMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 | buffers.lnSubPValueMat, buffers.lnInsPValueMat, buffers.lnDelPValueMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 | buffers.lnMatchPValueMat, alignType, computeProb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:689:32: required from ‘void RefineAlignment(std::vector&, T_RefSequence&, T_AlignmentCandidate&, MappingParameters&, MappingBuffers&) [with T_RefSequence = DNASequence; T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 689 | GuidedAlign(qSeq, tSeq, alignmentCandidate, idsScoreFn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 | params.guidedAlignBandSize, mappingBuffers, refinedAlignment, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 | Global, false); | ~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1555:32: required from here 1555 | RefineAlignment(vquery, alignedRefSequence, exploded, params, mappingBuffers); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:97:24: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 97 | assert(matrixNElem >= 0); | ~~~~~~~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp: In instantiation of ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, blasr::Alignment&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, std::vector&, AlignmentType, bool) [with QSequence = FASTQSequence; TSequence = DNASequence; T_ScoreFn = DistanceMatrixScoreFunction]’: /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:526:23: required from ‘int GuidedAlign(QSequence&, TSequence&, blasr::Alignment&, T_ScoreFn&, int, T_BufferCache&, blasr::Alignment&, AlignmentType, bool) [with QSequence = FASTQSequence; TSequence = DNASequence; T_ScoreFn = DistanceMatrixScoreFunction; T_BufferCache = MappingBuffers]’ 526 | return GuidedAlign(origQSeq, origTSeq, guideAlignment, scoreFn, bandSize, alignment, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 | buffers.scoreMat, buffers.pathMat, buffers.probMat, buffers.optPathProbMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 | buffers.lnSubPValueMat, buffers.lnInsPValueMat, buffers.lnDelPValueMat, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 | buffers.lnMatchPValueMat, alignType, computeProb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:698:32: required from ‘void RefineAlignment(std::vector&, T_RefSequence&, T_AlignmentCandidate&, MappingParameters&, MappingBuffers&) [with T_RefSequence = DNASequence; T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 698 | GuidedAlign(qSeq, tSeq, alignmentCandidate, distScoreFn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 | params.guidedAlignBandSize, mappingBuffers, refinedAlignment, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 | Global, false); | ~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1555:32: required from here 1555 | RefineAlignment(vquery, alignedRefSequence, exploded, params, mappingBuffers); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/GuidedAlign.hpp:97:24: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 97 | assert(matrixNElem >= 0); | ~~~~~~~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/OneGapAlignment.hpp: In instantiation of ‘int OneGapAlign(T_QuerySequence&, T_RefSequence&, T_ScoreFunction&, T_BufferList&, blasr::Alignment&) [with T_QuerySequence = FASTQSequence; T_RefSequence = DNASequence; T_ScoreFunction = DistanceMatrixScoreFunction; T_BufferList = MappingBuffers]’: ../iblasr/BlasrAlignImpl.hpp:918:40: required from ‘void AlignIntervals(T_TargetSequence&, T_QuerySequence&, T_QuerySequence&, WeightedIntervalSet&, int (*)[5], int, int, int, int, SequenceIndexDatabase&, std::vector*>&, MappingParameters&, MappingBuffers&, int) [with T_TargetSequence = FASTASequence; T_QuerySequence = SMRTSequence; TDBSequence = FASTQSequence]’ 918 | OneGapAlign(qSubSeq, tSubSeq, distScoreFn, mappingBuffers, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 | alignmentInGap); | ~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:280:23: required from ‘void MapRead(T_Sequence&, T_Sequence&, T_RefSequence&, T_SuffixArray&, BWT&, SeqBoundaryFtr&, T_TupleCountTable&, SequenceIndexDatabase&, MappingParameters&, MappingMetrics&, std::vector*>&, MappingBuffers&, MappingIPC*, MappingSemaphores&) [with T_Sequence = SMRTSequence; T_RefSequence = FASTASequence; T_SuffixArray = SuffixArray >; T_TupleCountTable = TupleCountTable; BWT = Bwt; MappingIPC = MappingData >, FASTASequence, DNATuple>]’ 280 | AlignIntervals(genome, read, readRC, topIntervals, SMRTDistanceMatrix, params.indel, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 | params.indel, params.sdpTupleSize, params.useSeqDB, seqdb, alignmentPtrs, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 | params, mappingBuffers, params.startRead); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../Blasr.cpp:347:16: required from here 347 | MapRead(subreadSequence, subreadSequenceRC, | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 | genome, // possibly multi fasta file read into one sequence | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | sarray, *bwtPtr, // The suffix array, and the bwt-fm index structures | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | seqBoundary, // Boundaries of contigs in the | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 | // genome, alignments do not span | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 | // the ends of boundaries. | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | ct, // Count table to use word frequencies in the genome to weight matches. | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 | seqdb, // Information about the names of | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 | // chromosomes in the genome, and | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 | // where their sequences are in the genome. | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 | params, // A huge list of parameters for | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 | // mapping, only compile/command | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 | // line values set. | ~~~~~~~~~~~~~~~~~~~ 360 | mapData->metrics, // Keep track of time/ hit counts, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 | // etc.. Not fully developed, but | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 | // should be. | ~~~~~~~~~~~~~ 363 | alignmentPtrs, // Where the results are stored. | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 | mappingBuffers, // A class of buffers for structurs | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 | // like dyanmic programming | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 | // matrices, match lists, etc., that are not | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 | // reallocated between calls to | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 | // MapRead. They are cleared though. | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 | mapData, // Some values that are shared | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 | // across threads. | ~~~~~~~~~~~~~~~~~~ 371 | semaphores); | ~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/OneGapAlignment.hpp:337:40: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 337 | assert(distanceBetweenLeftAndRight >= 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp: In instantiation of ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, AlignmentType, T_ScoreFn&, bool) [with T_QuerySequence = FASTQSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = IDSScoreFunction; DNALength = unsigned int]’: /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:30:22: required from ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, T_ScoreFn&, AlignmentType, bool) [with T_QuerySequence = FASTQSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = IDSScoreFunction; DNALength = unsigned int]’ 30 | return KBandAlign(pqSeq, ptSeq, matchMat, ins, del, k, scoreMat, pathMat, alignment, alignType, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | scoreFn, samplePaths); | ~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1301:38: required from ‘void PairwiseLocalAlign(T_Sequence&, T_RefSequence&, int, MappingParameters&, T_AlignmentCandidate&, MappingBuffers&, AlignmentType) [with T_RefSequence = DNASequence; T_Sequence = FASTQSequence; T_AlignmentCandidate = AlignmentCandidate]’ 1301 | qvAwareScore = KBandAlign(qSeq, tSeq, SMRTDistanceMatrix, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1302 | params.indel + 2, // ins | ~~~~~~~~~~~~~~~~~~~~~~~~~ 1303 | params.indel + 2, // del | ~~~~~~~~~~~~~~~~~~~~~~~~~ 1304 | k, mappingBuffers.scoreMat, mappingBuffers.pathMat, alignment, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1305 | idsScoreFn, alignType); | ~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:873:27: required from ‘void RefineAlignment(std::vector&, T_RefSequence&, T_AlignmentCandidate&, MappingParameters&, MappingBuffers&) [with T_RefSequence = DNASequence; T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 873 | PairwiseLocalAlign(qSeq, tSeq, k, params, alignmentCandidate, mappingBuffers, Fit); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1555:32: required from here 1555 | RefineAlignment(vquery, alignedRefSequence, exploded, params, mappingBuffers); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:151:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 151 | assert(t - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:152:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 152 | assert(q - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp: In instantiation of ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, AlignmentType, T_ScoreFn&, bool) [with T_QuerySequence = FASTQSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = QualityValueScoreFunction; DNALength = unsigned int]’: /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:30:22: required from ‘int KBandAlign(T_QuerySequence&, T_TargetSequence&, int (*)[5], int, int, DNALength, std::vector&, std::vector&, T_Alignment&, T_ScoreFn&, AlignmentType, bool) [with T_QuerySequence = FASTQSequence; T_TargetSequence = DNASequence; T_Alignment = AlignmentCandidate; T_ScoreFn = QualityValueScoreFunction; DNALength = unsigned int]’ 30 | return KBandAlign(pqSeq, ptSeq, matchMat, ins, del, k, scoreMat, pathMat, alignment, alignType, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | scoreFn, samplePaths); | ~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1310:38: required from ‘void PairwiseLocalAlign(T_Sequence&, T_RefSequence&, int, MappingParameters&, T_AlignmentCandidate&, MappingBuffers&, AlignmentType) [with T_RefSequence = DNASequence; T_Sequence = FASTQSequence; T_AlignmentCandidate = AlignmentCandidate]’ 1310 | qvAwareScore = KBandAlign(qSeq, tSeq, SMRTDistanceMatrix, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1311 | params.indel + 2, // ins | ~~~~~~~~~~~~~~~~~~~~~~~~~ 1312 | params.indel + 2, // del | ~~~~~~~~~~~~~~~~~~~~~~~~~ 1313 | k, mappingBuffers.scoreMat, mappingBuffers.pathMat, alignment, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1314 | scoreFn, alignType); | ~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrUtilsImpl.hpp:873:27: required from ‘void RefineAlignment(std::vector&, T_RefSequence&, T_AlignmentCandidate&, MappingParameters&, MappingBuffers&) [with T_RefSequence = DNASequence; T_Sequence = SMRTSequence; T_AlignmentCandidate = AlignmentCandidate]’ 873 | PairwiseLocalAlign(qSeq, tSeq, k, params, alignmentCandidate, mappingBuffers, Fit); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../iblasr/BlasrAlignImpl.hpp:1555:32: required from here 1555 | RefineAlignment(vquery, alignedRefSequence, exploded, params, mappingBuffers); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:151:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 151 | assert(t - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/algorithms/alignment/KBandAlign.hpp:152:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits] 152 | assert(q - 1 >= 0); | ~~~~~~^~~~ /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp: In function ‘void AlignmentToBamRecord(T_AlignmentCandidate&, T_Sequence&, T_Sequence&, PacBio::BAM::BamRecord&, AlignmentContext&, SupplementalQVList&, SAMOutput::Clipping, bool, bool) [with T_Sequence = SMRTSequence]’: /usr/include/pbseq/alignment/format/BAMPrinterImpl.hpp:30:5: warning: ‘nonnull’ argument ‘read’ compared to NULL [-Wnonnull-compare] 30 | if (dynamic_cast(&read) == NULL) { | ^~ [21/25] /usr/bin/powerpc64le-linux-gnu-g++ -Isawriter.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -DCMAKE_BUILD=1 -MD -MQ sawriter.p/utils_SAWriter.cpp.o -MF sawriter.p/utils_SAWriter.cpp.o.d -o sawriter.p/utils_SAWriter.cpp.o -c ../utils/SAWriter.cpp [22/25] /usr/bin/powerpc64le-linux-gnu-g++ -ItoAfg.p -I. -I.. -I/usr/include/libblasr -I/usr/include/hdf5/serial -I/usr/include/pbseq -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++17 -isystem /usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -DBOOST_ALL_NO_LIB -pthread -Wno-delete-non-virtual-dtor -Wno-non-virtual-dtor -Wno-unused-but-set-variable -Wno-unused-variable -DCMAKE_BUILD=1 -MD -MQ toAfg.p/utils_ToAfg.cpp.o -MF toAfg.p/utils_ToAfg.cpp.o.d -o toAfg.p/utils_ToAfg.cpp.o -c ../utils/ToAfg.cpp In file included from /usr/include/pbseq/hdf/DatasetCollection.hpp:9, from /usr/include/pbseq/hdf/HDFBasReader.hpp:11, from /usr/include/pbseq/alignment/files/ReaderAgglomerate.hpp:8, from ../utils/ToAfg.cpp:6: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:123:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ In file included from /usr/include/pbseq/hdf/HDF2DArray.hpp:4, from /usr/include/pbseq/hdf/HDFBasReader.hpp:12: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:124:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:125:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = unsigned char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:126:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short unsigned int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:127:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = short int; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:128:1: required from here 120 | void BufferedHDF2DArray::TypedWriteRow(const T *data, const H5::DataSpace &memorySpace, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = float; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp: In instantiation of ‘class BufferedHDF2DArray’: /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:137:1: required from here 132 | void BufferedHDF2DArray::Read(DSLength startX, DSLength endX, DSLength startY, \ | ^~ /usr/include/pbseq/hdf/HDFData.hpp:44:17: warning: ‘virtual int HDFData::Initialize(HDFGroup&, const std::string&)’ was hidden [-Woverloaded-virtual=] 44 | virtual int Initialize(HDFGroup &parentGroup, const std::string &datasetName); | ^~~~~~~~~~ /usr/include/pbseq/hdf/BufferedHDF2DArray.hpp:75:9: note: by ‘int BufferedHDF2DArray::Initialize(HDFGroup&, std::string, DSLength, int, bool) [with T = char; std::string = std::__cxx11::basic_string; DSLength = long unsigned int]’ 75 | int Initialize(HDFGroup &group, std::string datasetName, DSLength _rowLength = 0, | ^~~~~~~~~~ [23/25] /usr/bin/powerpc64le-linux-gnu-g++ -o blasr blasr.p/Blasr.cpp.o -I/usr/include/pbseq -L/usr/lib/powerpc64le-linux-gnu -L/usr/lib/powerpc64le-linux-gnu/hdf5/serial -Wl,--as-needed -Wl,--no-undefined -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -Wl,--start-group -lhdf5_cpp -lhdf5 -Wl,-z,relro libblasr_impl.a -pthread -lpbbam /usr/lib/powerpc64le-linux-gnu/libblasr.so /usr/lib/powerpc64le-linux-gnu/libpbbam.so /usr/lib/powerpc64le-linux-gnu/libpbcopper.so -lpbcopper /usr/lib/powerpc64le-linux-gnu/libz.so /usr/lib/powerpc64le-linux-gnu/libhts.so -lpbbam -lpbcopper -Wl,--end-group [24/25] /usr/bin/powerpc64le-linux-gnu-g++ -o sawriter sawriter.p/utils_SAWriter.cpp.o -I/usr/include/pbseq -L/usr/lib/powerpc64le-linux-gnu -L/usr/lib/powerpc64le-linux-gnu/hdf5/serial -Wl,--as-needed -Wl,--no-undefined -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -Wl,--start-group -lhdf5_cpp -lhdf5 -Wl,-z,relro libblasr_impl.a -pthread -lpbbam /usr/lib/powerpc64le-linux-gnu/libblasr.so /usr/lib/powerpc64le-linux-gnu/libpbbam.so /usr/lib/powerpc64le-linux-gnu/libpbcopper.so -lpbcopper /usr/lib/powerpc64le-linux-gnu/libz.so /usr/lib/powerpc64le-linux-gnu/libhts.so -lpbbam -lpbcopper -Wl,--end-group [25/25] /usr/bin/powerpc64le-linux-gnu-g++ -o toAfg toAfg.p/utils_ToAfg.cpp.o -I/usr/include/pbseq -L/usr/lib/powerpc64le-linux-gnu -L/usr/lib/powerpc64le-linux-gnu/hdf5/serial -Wl,--as-needed -Wl,--no-undefined -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DHAVE_HDF5_1_10_1 -Wl,--start-group -lhdf5_cpp -lhdf5 -Wl,-z,relro libblasr_impl.a -pthread -lpbbam /usr/lib/powerpc64le-linux-gnu/libblasr.so /usr/lib/powerpc64le-linux-gnu/libpbbam.so /usr/lib/powerpc64le-linux-gnu/libpbcopper.so -lpbcopper /usr/lib/powerpc64le-linux-gnu/libz.so /usr/lib/powerpc64le-linux-gnu/libhts.so -lpbbam -lpbcopper -Wl,--end-group dh: command-omitted: The call to "dh_auto_test -a -O--buildsystem=meson" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=meson dh_prep -a -O--buildsystem=meson dh_auto_install --destdir=debian/blasr/ -a -O--buildsystem=meson cd obj-powerpc64le-linux-gnu && DESTDIR=/<>/blasr-5.3.5\+dfsg/debian/blasr LC_ALL=C.UTF-8 ninja install [1/4] Generating BlasrGitHash.h with a custom command [1/2] Installing files. Installing blasr to /<>/debian/blasr/usr/bin Installing sawriter to /<>/debian/blasr/usr/bin dh_install -a -O--buildsystem=meson dh_installdocs -a -O--buildsystem=meson dh_installchangelogs -a -O--buildsystem=meson dh_installexamples -a -O--buildsystem=meson dh_installman -a -O--buildsystem=meson dh_installsystemduser -a -O--buildsystem=meson dh_lintian -a -O--buildsystem=meson dh_perl -a -O--buildsystem=meson dh_link -a -O--buildsystem=meson dh_strip_nondeterminism -a -O--buildsystem=meson dh_compress -a -O--buildsystem=meson dh_fixperms -a -O--buildsystem=meson dh_missing -a -O--buildsystem=meson dh_dwz -a -O--buildsystem=meson dh_strip -a -O--buildsystem=meson dh_makeshlibs -a -O--buildsystem=meson dh_shlibdeps -a -O--buildsystem=meson dh_installdeb -a -O--buildsystem=meson dh_gencontrol -a -O--buildsystem=meson dh_md5sums -a -O--buildsystem=meson dh_builddeb -a -O--buildsystem=meson dpkg-deb: building package 'blasr' in '../blasr_5.3.5+dfsg-6_ppc64el.deb'. dpkg-deb: building package 'blasr-dbgsym' in '../blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../blasr_5.3.5+dfsg-6_ppc64el.buildinfo dpkg-genchanges --build=any -O../blasr_5.3.5+dfsg-6_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-11-03T04:50:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ blasr_5.3.5+dfsg-6_ppc64el.changes: ----------------------------------- Format: 1.8 Date: Mon, 05 Dec 2022 20:49:02 +0100 Source: blasr Binary: blasr blasr-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 5.3.5+dfsg-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: blasr - mapping single-molecule sequencing reads Changes: blasr (5.3.5+dfsg-6) unstable; urgency=medium . * Upstream has archived this software * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: a64ae02d585a4d6646ad5b83cbfbb272c3fcc861 3181000 blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb 7e1357b1055c50f07d70fe055b8d26a9ef50a7ea 8945 blasr_5.3.5+dfsg-6_ppc64el.buildinfo 5cc4878fe875a570389e0ae40567f1e92e704f16 231388 blasr_5.3.5+dfsg-6_ppc64el.deb Checksums-Sha256: 372464547a58ad01e4262b18c0290d50a67e3b576e55130d4b9bcf2509d930e9 3181000 blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb 58b67221f042eced01158cd79117301a3c3ec2615b15c12578796fb2944c0ec6 8945 blasr_5.3.5+dfsg-6_ppc64el.buildinfo 070f265bc4044bd38ddb0d8518ce0491701a67a18b7bf26bdf12d420bd5c3f82 231388 blasr_5.3.5+dfsg-6_ppc64el.deb Files: ecb5bd8ba440e5caa45766bccc93b65b 3181000 debug optional blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb c5c548d43c57f565cd8b01d8dc6024bb 8945 science optional blasr_5.3.5+dfsg-6_ppc64el.buildinfo 04a3141aae76c1b7915457267f69575d 231388 science optional blasr_5.3.5+dfsg-6_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: blasr Binary: blasr blasr-dbgsym Architecture: ppc64el Version: 5.3.5+dfsg-6 Checksums-Md5: ecb5bd8ba440e5caa45766bccc93b65b 3181000 blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb 04a3141aae76c1b7915457267f69575d 231388 blasr_5.3.5+dfsg-6_ppc64el.deb Checksums-Sha1: a64ae02d585a4d6646ad5b83cbfbb272c3fcc861 3181000 blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb 5cc4878fe875a570389e0ae40567f1e92e704f16 231388 blasr_5.3.5+dfsg-6_ppc64el.deb Checksums-Sha256: 372464547a58ad01e4262b18c0290d50a67e3b576e55130d4b9bcf2509d930e9 3181000 blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb 070f265bc4044bd38ddb0d8518ce0491701a67a18b7bf26bdf12d420bd5c3f82 231388 blasr_5.3.5+dfsg-6_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 03 Nov 2024 04:50:30 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.5), bash (= 5.2.32-1+b2), binutils (= 2.43.1-5), binutils-common (= 2.43.1-5), binutils-x86-64-linux-gnu (= 2.43.1-5), bsdextrautils (= 2.40.2-9), bsdutils (= 1:2.40.2-9), build-essential (= 12.12), bzip2 (= 1.0.8-6), cmake (= 3.30.5-1), cmake-data (= 3.30.5-1), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-8), cpp-14-x86-64-linux-gnu (= 14.2.0-8), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.20), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-8), g++-14-x86-64-linux-gnu (= 14.2.0-8), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-8), gcc-14-base (= 14.2.0-8), gcc-14-x86-64-linux-gnu (= 14.2.0-8), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), googletest (= 1.15.2-1), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hdf5-helpers (= 1.10.10+repack-4), hostname (= 3.25), init-system-helpers (= 1.67), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.3-1+b1), libaec0 (= 1.1.3-1+b1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.7.4-1), libasan8 (= 14.2.0-8), libatomic1 (= 14.2.0-8), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.1-2), libaudit1 (= 1:4.0.1-2), libbinutils (= 2.43.1-5), libblasr-dev (= 5.3.5+dfsg-8), libblasr5.3.5 (= 5.3.5+dfsg-8), libblkid1 (= 2.40.2-9), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-3.2), libbrotli-dev (= 1.1.0-2+b5), libbrotli1 (= 1.1.0-2+b5), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.40-3), libc-dev-bin (= 2.40-3), libc6 (= 2.40-3), libc6-dev (= 2.40-3), libcap-ng0 (= 0.8.5-3), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-8), libcom-err2 (= 1.47.1-1+b1), libcrypt-dev (= 1:4.4.36-5), libcrypt1 (= 1:4.4.36-5), libctf-nobfd0 (= 2.43.1-5), libctf0 (= 2.43.1-5), libcurl3t64-gnutls (= 8.10.1-2), libcurl4-gnutls-dev (= 8.10.1-2), libcurl4t64 (= 8.10.1-2), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.273), libdebhelper-perl (= 13.20), libdeflate-dev (= 1.22-1), libdeflate0 (= 1.22-1), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.6.3-2), libffi8 (= 3.4.6-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-14-dev (= 14.2.0-8), libgcc-s1 (= 14.2.0-8), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran5 (= 14.2.0-8), libgmp-dev (= 2:6.3.0+dfsg-2+b2), libgmp10 (= 2:6.3.0+dfsg-2+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-2+b2), libgnutls-dane0t64 (= 3.8.6-2+b1), libgnutls-openssl27t64 (= 3.8.6-2+b1), libgnutls28-dev (= 3.8.6-2+b1), libgnutls30t64 (= 3.8.6-2+b1), libgomp1 (= 14.2.0-8), libgprofng0 (= 2.43.1-5), libgssapi-krb5-2 (= 1.21.3-3), libgtest-dev (= 1.15.2-1), libhdf5-103-1t64 (= 1.10.10+repack-4), libhdf5-cpp-103-1t64 (= 1.10.10+repack-4), libhdf5-dev (= 1.10.10+repack-4), libhdf5-fortran-102t64 (= 1.10.10+repack-4), libhdf5-hl-100t64 (= 1.10.10+repack-4), libhdf5-hl-cpp-100t64 (= 1.10.10+repack-4), libhdf5-hl-fortran-100t64 (= 1.10.10+repack-4), libhogweed6t64 (= 3.10-1+b1), libhts-dev (= 1.20+ds-2), libhts3t64 (= 1.20+ds-2), libhtscodecs2 (= 1.6.1-1), libhwasan0 (= 14.2.0-8), libicu72 (= 72.1-5+b1), libidn2-0 (= 2.3.7-2+b1), libidn2-dev (= 2.3.7-2+b1), libisl23 (= 0.27-1), libitm1 (= 14.2.0-8), libjansson4 (= 2.14-2+b3), libjpeg-dev (= 1:2.1.5-3+b1), libjpeg62-turbo (= 1:2.1.5-3+b1), libjpeg62-turbo-dev (= 1:2.1.5-3+b1), libjsoncpp26 (= 1.9.6-2), libk5crypto3 (= 1.21.3-3), libkeyutils1 (= 1.6.3-4), libkrb5-3 (= 1.21.3-3), libkrb5support0 (= 1.21.3-3), libldap-2.5-0 (= 2.5.18+dfsg-3+b1), liblsan0 (= 14.2.0-8), liblz4-1 (= 1.9.4-3+b1), liblzma-dev (= 5.6.3-1+b1), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.40.2-9), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libncursesw6 (= 6.5-2+b1), libnettle8t64 (= 3.10-1+b1), libnghttp2-14 (= 1.64.0-1), libnghttp2-dev (= 1.64.0-1), libnghttp3-9 (= 1.4.0-1+b1), libnghttp3-dev (= 1.4.0-1+b1), libngtcp2-16 (= 1.6.0-1), libngtcp2-crypto-gnutls-dev (= 1.6.0-1), libngtcp2-crypto-gnutls8 (= 1.6.0-1), libngtcp2-dev (= 1.6.0-1), libnsl2 (= 1.3.0-3+b3), libp11-kit-dev (= 0.25.5-2+b1), libp11-kit0 (= 0.25.5-2+b1), libpam-modules (= 1.5.3-7+b1), libpam-modules-bin (= 1.5.3-7+b1), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7+b1), libpbbam-dev (= 2.4.0+dfsg-1+b4), libpbbam2.4.0 (= 2.4.0+dfsg-1+b4), libpbcopper-dev (= 2.3.0+dfsg-2+b1), libpbcopper2.3.0 (= 2.3.0+dfsg-2+b1), libpbdata-dev (= 5.3.5+dfsg-8), libpbihdf-dev (= 5.3.5+dfsg-8), libpbseq-dev (= 5.3.5+dfsg-8), libpcre2-8-0 (= 10.42-4+b2), libperl5.40 (= 5.40.0-6), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libproc2-0 (= 2:4.0.4-6), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-stdlib (= 3.12.6-1), libpython3.12-minimal (= 3.12.7-1), libpython3.12-stdlib (= 3.12.7-1), libquadmath0 (= 14.2.0-8), libreadline8t64 (= 8.2-5), librhash1 (= 1.4.5-1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-8), libsasl2-modules-db (= 2.1.28+dfsg1-8), libseccomp2 (= 2.5.5-1+b2), libselinux1 (= 3.7-3), libsframe1 (= 2.43.1-5), libsmartcols1 (= 2.40.2-9), libsqlite3-0 (= 3.46.1-1), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.3.2-2), libssl3t64 (= 3.3.2-2), libstdc++-14-dev (= 14.2.0-8), libstdc++6 (= 14.2.0-8), libsystemd0 (= 256.7-3), libsz2 (= 1.1.3-1+b1), libtasn1-6 (= 4.19.0-3+b3), libtasn1-6-dev (= 4.19.0-3+b3), libtinfo6 (= 6.5-2+b1), libtirpc-common (= 1.3.4+ds-1.3), libtirpc3t64 (= 1.3.4+ds-1.3+b1), libtool (= 2.4.7-8), libtsan2 (= 14.2.0-8), libubsan1 (= 14.2.0-8), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 256.7-3), libunbound8 (= 1.22.0-1), libunistring5 (= 1.2-1+b1), libuuid1 (= 2.40.2-9), libuv1t64 (= 1.48.0-6), libxml2 (= 2.12.7+dfsg+really2.9.14-0.1), libxxhash0 (= 0.8.2-2+b2), libzstd-dev (= 1.5.6+dfsg-1+b1), libzstd1 (= 1.5.6+dfsg-1+b1), linux-libc-dev (= 6.11.5-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), media-types (= 10.1.0), meson (= 1.6.0-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2+b1), netbase (= 6.4), nettle-dev (= 3.10-1+b1), ninja-build (= 1.12.1-1), openssl-provider-legacy (= 3.3.2-2), patch (= 2.7.6-7), perl (= 5.40.0-6), perl-base (= 5.40.0-6), perl-modules-5.40 (= 5.40.0-6), pkg-config (= 1.8.1-4), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-6), python3 (= 3.12.6-1), python3-autocommand (= 2.2.2-3), python3-inflect (= 7.3.1-2), python3-jaraco.context (= 6.0.0-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.12.6-1), python3-more-itertools (= 10.5.0-1), python3-pkg-resources (= 75.2.0-1), python3-setuptools (= 75.2.0-1), python3-typeguard (= 4.4.0-1), python3-typing-extensions (= 4.12.2-2), python3-zipp (= 3.20.2-1), python3.12 (= 3.12.7-1), python3.12-minimal (= 3.12.7-1), readline-common (= 8.2-5), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.11-1), tar (= 1.35+dfsg-3), tzdata (= 2024b-3), util-linux (= 2.40.2-9), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1670269742" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ blasr-dbgsym_5.3.5+dfsg-6_ppc64el.deb ------------------------------------- new Debian package, version 2.0. size 3181000 bytes: control archive=644 bytes. 416 bytes, 12 lines control 299 bytes, 3 lines md5sums Package: blasr-dbgsym Source: blasr Version: 5.3.5+dfsg-6 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 3252 Depends: blasr (= 5.3.5+dfsg-6) Section: debug Priority: optional Description: debug symbols for blasr Build-Ids: 156a227908681700958816cb22c125c16b8e24a5 186969cf754956a836ff7485137984b66495a06d drwxr-xr-x root/root 0 2022-12-05 19:49 ./ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/.build-id/15/ -rw-r--r-- root/root 3099432 2022-12-05 19:49 ./usr/lib/debug/.build-id/15/6a227908681700958816cb22c125c16b8e24a5.debug drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/.build-id/18/ -rw-r--r-- root/root 174416 2022-12-05 19:49 ./usr/lib/debug/.build-id/18/6969cf754956a836ff7485137984b66495a06d.debug drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 41624 2022-12-05 19:49 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/blasr.debug drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-12-05 19:49 ./usr/share/doc/blasr-dbgsym -> blasr blasr_5.3.5+dfsg-6_ppc64el.deb ------------------------------ new Debian package, version 2.0. size 231388 bytes: control archive=1172 bytes. 813 bytes, 14 lines control 913 bytes, 14 lines md5sums Package: blasr Version: 5.3.5+dfsg-6 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 807 Depends: libblasr5.3.5 (>= 5.3.5+dfsg), libc6 (>= 2.38), libgcc-s1 (>= 3.0), libhdf5-cpp-103-1t64 (>= 1.10.5), libpbbam2.4.0 (>= 2.4.0+dfsg), libpbcopper2.3.0 (>= 2.3.0+dfsg), libstdc++6 (>= 13.1), libpbseq (>= 5.3.5+dfsg-4~) Section: science Priority: optional Homepage: https://github.com/PacificBiosciences/blasr Description: mapping single-molecule sequencing reads Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. Such reads are thousands of bases long, with divergence between them and the genome being dominated by insertion and deletion error. drwxr-xr-x root/root 0 2022-12-05 19:49 ./ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/bin/ -rwxr-xr-x root/root 726616 2022-12-05 19:49 ./usr/bin/blasr -rwxr-xr-x root/root 68456 2022-12-05 19:49 ./usr/bin/sawriter drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/doc/blasr/ -rw-r--r-- root/root 1291 2021-02-18 10:03 ./usr/share/doc/blasr/README.md -rw-r--r-- root/root 208 2022-12-05 19:49 ./usr/share/doc/blasr/README.source -rw-r--r-- root/root 542 2022-12-05 19:49 ./usr/share/doc/blasr/README.test -rw-r--r-- root/root 41 2022-12-05 19:49 ./usr/share/doc/blasr/TODO.Debian -rw-r--r-- root/root 1425 2022-12-05 19:49 ./usr/share/doc/blasr/changelog.Debian.gz -rw-r--r-- root/root 2196 2022-12-05 19:49 ./usr/share/doc/blasr/copyright drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/doc/blasr/examples/ -rw-r--r-- root/root 65 2022-12-05 19:49 ./usr/share/doc/blasr/examples/query.fasta -rw-r--r-- root/root 72 2022-12-05 19:49 ./usr/share/doc/blasr/examples/ref.fa -rw-r--r-- root/root 1067 2022-12-05 19:49 ./usr/share/doc/blasr/run-unit-test drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/lintian/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 163 2022-12-05 19:49 ./usr/share/lintian/overrides/blasr drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/man/ drwxr-xr-x root/root 0 2022-12-05 19:49 ./usr/share/man/man1/ -rw-r--r-- root/root 1369 2022-12-05 19:49 ./usr/share/man/man1/blasr.1.gz -rw-r--r-- root/root 872 2022-12-05 19:49 ./usr/share/man/man1/sawriter.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1487 B] Get:5 copy:/<>/apt_archive ./ Packages [1571 B] Fetched 3673 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libglib2.0-0t64 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop openssl patchutils perl-openssl-defaults plzip shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl low-memory-monitor libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libglib2.0-0t64 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:ppc64el shared-mime-info t1utils ucf unzip 0 upgraded, 143 newly installed, 0 to remove and 0 not upgraded. Need to get 16.1 MB of archives. After this operation, 68.1 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get:3 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:4 http://localhost:3142/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get:6 http://localhost:3142/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1+b1 [63.6 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.10.1-2 [360 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libstemmer0d amd64 2.2.0-4+b2 [119 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libxmlb2 amd64 0.3.21-1 [63.0 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libappstream5 amd64 1.0.3-1+b1 [224 kB] Get:15 http://localhost:3142/debian unstable/main amd64 appstream amd64 1.0.3-1+b1 [469 kB] Get:16 http://localhost:3142/debian unstable/main amd64 diffstat amd64 1.66-1 [34.0 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get:18 http://localhost:3142/debian unstable/main amd64 gpgconf amd64 2.2.45-2 [120 kB] Get:19 http://localhost:3142/debian unstable/main amd64 gpg amd64 2.2.45-2 [531 kB] Get:20 http://localhost:3142/debian unstable/main amd64 iso-codes all 4.17.0-1 [3055 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40+b6 [67.8 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:31 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:36 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:40 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.1 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:50 http://localhost:3142/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.38-1+b1 [129 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1+b4 [32.8 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b4 [98.1 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:70 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:71 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:79 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:86 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:87 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:90 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:96 http://localhost:3142/debian unstable/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:98 http://localhost:3142/debian unstable/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:99 http://localhost:3142/debian unstable/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:100 http://localhost:3142/debian unstable/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:101 http://localhost:3142/debian unstable/main amd64 liblz1 amd64 1.15~pre2-1 [39.2 kB] Get:102 http://localhost:3142/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2+b1 [35.6 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:105 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:110 http://localhost:3142/debian unstable/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:112 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.27-1+b3 [12.5 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB] Get:121 http://localhost:3142/debian unstable/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:123 http://localhost:3142/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.46-1+b1 [64.9 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B] Get:127 http://localhost:3142/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b3 [13.0 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:130 http://localhost:3142/debian unstable/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-2+b3 [20.4 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:133 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:135 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b1 [314 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.902.0+ds-2+b1 [35.5 kB] Get:138 http://localhost:3142/debian unstable/main amd64 plzip amd64 1.11-2 [63.6 kB] Get:139 http://localhost:3142/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:140 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:141 http://localhost:3142/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:142 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] Get:143 http://localhost:3142/debian unstable/main amd64 lintian all 2.120.0 [1058 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.1 MB in 0s (114 MB/s) Selecting previously unselected package openssl. (Reading database ... 44233 files and directories currently installed.) Preparing to unpack .../000-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../001-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package ucf. Preparing to unpack .../002-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../003-libglib2.0-0t64_2.82.2-2_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.2-2) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../004-shared-mime-info_2.4-5+b1_amd64.deb ... Unpacking shared-mime-info (2.4-5+b1) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../005-libnghttp3-9_1.4.0-1+b1_amd64.deb ... 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Selecting previously unselected package sbuild-build-depends-lintian-dummy:ppc64el. Preparing to unpack .../142-sbuild-build-depends-lintian-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b6) ... Setting up liblz1:amd64 (1.15~pre2-1) ... Setting up libberkeleydb-perl:amd64 (0.66-1) ... Setting up plzip (1.11-2) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2+b3) ... Setting up libmouse-perl:amd64 (2.5.11-1+b1) ... Setting up libdata-messagepack-perl (1.02-1+b4) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-1) ... 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Setting up libngtcp2-16:amd64 (1.6.0-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b4) ... Setting up libstemmer0d:amd64 (2.2.0-4+b2) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b4) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.3.2-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b4) ... Setting up libperlio-gzip-perl (0.20-1+b4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b3) ... Setting up libmarkdown2:amd64 (2.2.7-2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up iso-codes (4.17.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.45-2) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b4) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxmlb2:amd64 (0.3.21-1) ... Setting up libcurl3t64-gnutls:amd64 (8.10.1-2) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b3) ... Setting up libappstream5:amd64 (1.0.3-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.46-1+b1) ... Setting up appstream (1.0.3-1+b1) ... ✔ Metadata cache was updated successfully. Setting up libdata-optlist-perl (0.114-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.120.0) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 86264 Build-Time: 138 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 31 Job: blasr_5.3.5+dfsg-6 Lintian: pass Machine Architecture: amd64 Package: blasr Package-Time: 185 Source-Version: 5.3.5+dfsg-6 Space: 86264 Status: successful Version: 5.3.5+dfsg-6 -------------------------------------------------------------------------------- Finished at 2024-11-03T04:50:30Z Build needed 00:03:05, 86264k disk space