sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | bppsuite 2.4.1-4 (armhf) Fri, 25 Feb 2022 01:26:37 +0000 | +==============================================================================+ Package: bppsuite Version: 2.4.1-4 Source Version: 2.4.1-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-479e19fa-a2db-4d6b-9fde-315d1f437931' with '<>' I: NOTICE: Log filtering will replace 'build/bppsuite-Qxwu3O/resolver-dQILfs' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-02-24-2004.03-F-2022-02-24-0806.38.pdiff [34.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-02-24-2004.03-F-2022-02-24-0806.38.pdiff [59.3 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-02-24-2004.03-F-2022-02-24-0806.38.pdiff [34.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-02-24-2004.03-F-2022-02-24-0806.38.pdiff [59.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8701 kB] Fetched 9088 kB in 4s (2344 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: findutils 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 681 kB of archives. After this operation, 145 kB disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 findutils amd64 4.9.0-2 [681 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 681 kB in 0s (11.6 MB/s) (Reading database ... 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Download source files with APT ------------------------------ Reading package lists... NOTICE: 'bppsuite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/bppsuite.git Please use: git clone https://salsa.debian.org/med-team/bppsuite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 284 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main bppsuite 2.4.1-4 (dsc) [2211 B] Get:2 http://debian.oregonstate.edu/debian unstable/main bppsuite 2.4.1-4 (tar) [214 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main bppsuite 2.4.1-4 (diff) [67.8 kB] Fetched 284 kB in 0s (13.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/bppsuite-Qxwu3O/bppsuite-2.4.1' with '<>' I: NOTICE: Log filtering will replace 'build/bppsuite-Qxwu3O' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [434 B] Get:5 copy:/<>/apt_archive ./ Packages [522 B] Fetched 1913 B in 0s (70.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cmake cmake-data cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-cross-base gcc-12-base:armhf gcc-12-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbpp-core-dev:armhf libbpp-core4:armhf libbpp-phyl-dev:armhf libbpp-phyl12:armhf libbpp-popgen-dev:armhf libbpp-popgen8:armhf libbpp-seq-dev:armhf libbpp-seq12:armhf libbrotli1 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2 liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.34 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtext-unidecode-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.34 pkg-config po-debconf procps rpcsvc-proto sensible-utils tex-common texinfo ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build cmake-format gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf glibc-doc manpages-dev:armhf gnupg git bzr libeigen3-doc libmpfrc++-dev krb5-doc:armhf krb5-user:armhf libstdc++-11-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:armhf ca-certificates libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:armhf libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cmake cmake-data cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-cross-base gcc-12-base:armhf gcc-12-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbpp-core-dev:armhf libbpp-core4:armhf libbpp-phyl-dev:armhf libbpp-phyl12:armhf libbpp-popgen-dev:armhf libbpp-popgen8:armhf libbpp-seq-dev:armhf libbpp-seq12:armhf libbrotli1 libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2 liblocale-gettext-perl libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.34 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtext-unidecode-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.34 pkg-config po-debconf procps rpcsvc-proto sbuild-build-depends-main-dummy:armhf sensible-utils tex-common texinfo ucf 0 upgraded, 145 newly installed, 0 to remove and 0 not upgraded. Need to get 133 MB of archives. After this operation, 548 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.34 all 5.34.0-3 [2850 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.34 amd64 5.34.0-3 [4208 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.34.0-3 [297 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 tex-common all 6.17 [53.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armhf gcc-12-base armhf 12-20220222-1 [206 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.4.0-5 [200 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.3-2 [102 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.17-6 [63.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.17-6 [502 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-2 [295 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-2 [129 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-2 [66.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.3-1+b1 [144 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.5-1 [37.6 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.10.1-1 [1407 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.14-1 [37.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.1 [823 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.38-2 [3153 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.27-1.1 [118 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.33-7 [2289 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-17 [1959 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-17 [10.2 MB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.21.1 [1568 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.21.1 [2171 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-6 [701 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.5.2-1 [345 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b3 [276 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg2-3 [74.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg2-3 [111 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.59+dfsg-1+b1 [233 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.10.0-2 [178 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.81.0-1 [358 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.6-1 [108 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-3 [78.5 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.2-1 [129 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.43.0-1 [136 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 dh-elpa-helper all 2.0.10 [11.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 emacsen-common all 3.0.4 [19.3 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.22.1-1 [1905 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.22.1-1+b1 [7990 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf-base amd64 11.2.0-16cross1 [207 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-arm-linux-gnueabihf amd64 11.2.0-16cross1 [8042 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:11.2.0-2 [17.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-16cross1 [203 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-12-cross-base all 12-20220222-1cross1 [202 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.33-1cross1 [1110 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 12-20220222-1cross1 [36.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 12-20220222-1cross1 [94.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 12-20220222-1cross1 [6684 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 11.2.0-16cross1 [1964 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 12-20220222-1cross1 [479 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 12-20220222-1cross1 [855 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-armhf-cross all 11.2.0-16cross1 [711 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf amd64 11.2.0-16cross1 [15.9 MB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:11.2.0-2 [1460 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.15.5-1cross1 [1541 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.33-1cross1 [1773 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-armhf-cross all 11.2.0-16cross1 [1971 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-arm-linux-gnueabihf amd64 11.2.0-16cross1 [8920 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:11.2.0-2 [1180 B] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.6 [193 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.186-1 [179 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.6 [1054 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 12-20220222-1 [36.5 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.33-7 [2352 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.4.0-5 [2778 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 12-20220222-1 [6924 B] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 12-20220222-1 [522 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-core4 armhf 2.4.1-7 [493 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-core-dev armhf 2.4.1-7 [932 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-seq12 armhf 2.4.1-7 [414 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-phyl12 armhf 2.4.1-6 [1363 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-seq-dev armhf 2.4.1-7 [729 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-phyl-dev armhf 2.4.1-6 [3063 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-popgen8 armhf 2.4.1-6 [194 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armhf libbpp-popgen-dev armhf 2.4.1-6 [282 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.16.10-1 [1466 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.27-1.1 [96.0 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.27-1.1 [125 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.46.5-2 [74.8 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.19.2-2 [62.7 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.19.2-2 [109 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-2 [14.4 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1m-1 [1308 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.19.2-2 [319 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.19.2-2 [144 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc3 armhf 1.3.2-2 [72.7 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc-dev armhf 1.3.2-2 [182 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.33-7 [1805 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.70.4-1 [1405 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main amd64 libeigen3-dev all 3.4.0-2 [1040 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 12-20220222-1 [96.9 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 12-20220222-1 [856 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.4.0-5 [659 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.4.0-5 [1774 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-unidecode-perl all 1.30-1 [103 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main amd64 texinfo amd64 6.8-4+b1 [1827 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 133 MB in 1s (114 MB/s) Selecting previously unselected package perl-modules-5.34. (Reading database ... 10598 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.34_5.34.0-3_all.deb ... Unpacking perl-modules-5.34 (5.34.0-3) ... Selecting previously unselected package libperl5.34:amd64. Preparing to unpack .../001-libperl5.34_5.34.0-3_amd64.deb ... Unpacking libperl5.34:amd64 (5.34.0-3) ... Selecting previously unselected package perl. Preparing to unpack .../002-perl_5.34.0-3_amd64.deb ... Unpacking perl (5.34.0-3) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../003-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package ucf. Preparing to unpack .../005-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package tex-common. Preparing to unpack .../006-tex-common_6.17_all.deb ... Unpacking tex-common (6.17) ... Selecting previously unselected package gcc-12-base:armhf. Preparing to unpack .../007-gcc-12-base_12-20220222-1_armhf.deb ... Unpacking gcc-12-base:armhf (12-20220222-1) ... Selecting previously unselected package gcc-9-base:armhf. Preparing to unpack .../008-gcc-9-base_9.4.0-5_armhf.deb ... Unpacking gcc-9-base:armhf (9.4.0-5) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../009-libncurses6_6.3-2_amd64.deb ... Unpacking libncurses6:amd64 (6.3-2) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../010-libprocps8_2%3a3.3.17-6_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.17-6) ... Selecting previously unselected package procps. Preparing to unpack .../011-procps_2%3a3.3.17-6_amd64.deb ... Unpacking procps (2:3.3.17-6) ... Selecting previously unselected package libmagic-mgc. 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Unpacking bsdextrautils (2.37.3-1+b1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../019-libpipeline1_1.5.5-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.5-1) ... Selecting previously unselected package man-db. Preparing to unpack .../020-man-db_2.10.1-1_amd64.deb ... Unpacking man-db (2.10.1-1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../021-libsigsegv2_2.14-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1) ... Selecting previously unselected package m4. Preparing to unpack .../022-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../023-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../024-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. 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Preparing to unpack .../043-libsasl2-modules-db_2.1.27+dfsg2-3_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg2-3) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../044-libsasl2-2_2.1.27+dfsg2-3_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg2-3) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../045-libldap-2.4-2_2.4.59+dfsg-1+b1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.59+dfsg-1+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../046-libnghttp2-14_1.43.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../047-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../048-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../049-libssh2-1_1.10.0-2_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-2) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../050-libcurl4_7.81.0-1_amd64.deb ... Unpacking libcurl4:amd64 (7.81.0-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../051-libexpat1_2.4.6-1_amd64.deb ... Unpacking libexpat1:amd64 (2.4.6-1) ... Selecting previously unselected package libjsoncpp25:amd64. Preparing to unpack .../052-libjsoncpp25_1.9.5-3_amd64.deb ... Unpacking libjsoncpp25:amd64 (1.9.5-3) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../053-librhash0_1.4.2-1_amd64.deb ... Unpacking librhash0:amd64 (1.4.2-1) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../054-libuv1_1.43.0-1_amd64.deb ... Unpacking libuv1:amd64 (1.43.0-1) ... Selecting previously unselected package dh-elpa-helper. Preparing to unpack .../055-dh-elpa-helper_2.0.10_all.deb ... Unpacking dh-elpa-helper (2.0.10) ... Selecting previously unselected package emacsen-common. Preparing to unpack .../056-emacsen-common_3.0.4_all.deb ... Unpacking emacsen-common (3.0.4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../057-cmake-data_3.22.1-1_all.deb ... Unpacking cmake-data (3.22.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../058-cmake_3.22.1-1+b1_amd64.deb ... Unpacking cmake (3.22.1-1+b1) ... Selecting previously unselected package gcc-11-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../059-gcc-11-arm-linux-gnueabihf-base_11.2.0-16cross1_amd64.deb ... Unpacking gcc-11-arm-linux-gnueabihf-base:amd64 (11.2.0-16cross1) ... Selecting previously unselected package cpp-11-arm-linux-gnueabihf. Preparing to unpack .../060-cpp-11-arm-linux-gnueabihf_11.2.0-16cross1_amd64.deb ... Unpacking cpp-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../061-cpp-arm-linux-gnueabihf_4%3a11.2.0-2_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:11.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../062-cross-config_2.6.18+nmu2_all.deb ... Unpacking cross-config (2.6.18+nmu2) ... Selecting previously unselected package gcc-11-cross-base. Preparing to unpack .../063-gcc-11-cross-base_11.2.0-16cross1_all.deb ... Unpacking gcc-11-cross-base (11.2.0-16cross1) ... Selecting previously unselected package gcc-12-cross-base. Preparing to unpack .../064-gcc-12-cross-base_12-20220222-1cross1_all.deb ... Unpacking gcc-12-cross-base (12-20220222-1cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../065-libc6-armhf-cross_2.33-1cross1_all.deb ... Unpacking libc6-armhf-cross (2.33-1cross1) ... Selecting previously unselected package libgcc-s1-armhf-cross. Preparing to unpack .../066-libgcc-s1-armhf-cross_12-20220222-1cross1_all.deb ... Unpacking libgcc-s1-armhf-cross (12-20220222-1cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../067-libgomp1-armhf-cross_12-20220222-1cross1_all.deb ... Unpacking libgomp1-armhf-cross (12-20220222-1cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../068-libatomic1-armhf-cross_12-20220222-1cross1_all.deb ... Unpacking libatomic1-armhf-cross (12-20220222-1cross1) ... Selecting previously unselected package libasan6-armhf-cross. Preparing to unpack .../069-libasan6-armhf-cross_11.2.0-16cross1_all.deb ... Unpacking libasan6-armhf-cross (11.2.0-16cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../070-libstdc++6-armhf-cross_12-20220222-1cross1_all.deb ... Unpacking libstdc++6-armhf-cross (12-20220222-1cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../071-libubsan1-armhf-cross_12-20220222-1cross1_all.deb ... Unpacking libubsan1-armhf-cross (12-20220222-1cross1) ... Selecting previously unselected package libgcc-11-dev-armhf-cross. Preparing to unpack .../072-libgcc-11-dev-armhf-cross_11.2.0-16cross1_all.deb ... Unpacking libgcc-11-dev-armhf-cross (11.2.0-16cross1) ... Selecting previously unselected package gcc-11-arm-linux-gnueabihf. Preparing to unpack .../073-gcc-11-arm-linux-gnueabihf_11.2.0-16cross1_amd64.deb ... Unpacking gcc-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabihf. Preparing to unpack .../074-gcc-arm-linux-gnueabihf_4%3a11.2.0-2_amd64.deb ... Unpacking gcc-arm-linux-gnueabihf (4:11.2.0-2) ... Selecting previously unselected package linux-libc-dev-armhf-cross. Preparing to unpack .../075-linux-libc-dev-armhf-cross_5.15.5-1cross1_all.deb ... Unpacking linux-libc-dev-armhf-cross (5.15.5-1cross1) ... Selecting previously unselected package libc6-dev-armhf-cross. Preparing to unpack .../076-libc6-dev-armhf-cross_2.33-1cross1_all.deb ... Unpacking libc6-dev-armhf-cross (2.33-1cross1) ... Selecting previously unselected package libstdc++-11-dev-armhf-cross. Preparing to unpack .../077-libstdc++-11-dev-armhf-cross_11.2.0-16cross1_all.deb ... Unpacking libstdc++-11-dev-armhf-cross (11.2.0-16cross1) ... Selecting previously unselected package g++-11-arm-linux-gnueabihf. Preparing to unpack .../078-g++-11-arm-linux-gnueabihf_11.2.0-16cross1_amd64.deb ... Unpacking g++-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Selecting previously unselected package g++-arm-linux-gnueabihf. Preparing to unpack .../079-g++-arm-linux-gnueabihf_4%3a11.2.0-2_amd64.deb ... 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Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.41-2) ... Setting up linux-libc-dev:armhf (5.16.10-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.41-2) ... Setting up libatomic1-armhf-cross (12-20220222-1cross1) ... Setting up perl-modules-5.34 (5.34.0-3) ... Setting up gcc-12-base:armhf (12-20220222-1) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg2-3) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up libuv1:amd64 (1.43.0-1) ... Setting up libstdc++6-armhf-cross (12-20220222-1cross1) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up emacsen-common (3.0.4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up dh-elpa-helper (2.0.10) ... Setting up gcc-11-arm-linux-gnueabihf-base:amd64 (11.2.0-16cross1) ... Setting up libncurses6:amd64 (6.3-2) ... Setting up libsigsegv2:amd64 (2.14-1) ... Setting up linux-libc-dev-armhf-cross (5.15.5-1cross1) ... Setting up autopoint (0.21-4) ... Setting up libjsoncpp25:amd64 (1.9.5-3) ... Setting up libubsan1-armhf-cross (12-20220222-1cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg2-3) ... Setting up gcc-11-cross-base (11.2.0-16cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up librhash0:amd64 (1.4.2-1) ... Setting up libcrypt-dev:amd64 (1:4.4.27-1.1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.33-7) ... Setting up libssh2-1:amd64 (1.10.0-2) ... Setting up cmake-data (3.22.1-1) ... Setting up binutils-arm-linux-gnueabihf (2.38-2) ... Setting up libelf1:amd64 (0.186-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-6) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up libprocps8:amd64 (2:3.3.17-6) ... Setting up gcc-9-base:armhf (9.4.0-5) ... Setting up cpp-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Setting up libgomp1-armhf-cross (12-20220222-1cross1) ... Setting up libperl5.34:amd64 (5.34.0-3) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:amd64 (3.5.2-1) ... Setting up libc6-dev-armhf-cross (2.33-1cross1) ... Setting up libldap-2.4-2:amd64 (2.4.59+dfsg-1+b1) ... Setting up m4 (1.4.18-5) ... Setting up perl (5.34.0-3) ... Setting up libasan6-armhf-cross (11.2.0-16cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.21.1) ... Setting up autoconf (2.71-2) ... Setting up libstdc++-11-dev:amd64 (11.2.0-17) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up procps (2:3.3.17-6) ... Setting up libcurl4:amd64 (7.81.0-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up cpp-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-17) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.6) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.10.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.21.1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up tex-common (6.17) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libgcc-11-dev-armhf-cross (11.2.0-16cross1) ... Setting up libstdc++-11-dev-armhf-cross (11.2.0-16cross1) ... Setting up pkg-config (0.29.2-1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up cmake (3.22.1-1+b1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Setting up gcc-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libeigen3-dev (3.4.0-2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up g++-11-arm-linux-gnueabihf (11.2.0-16cross1) ... Setting up g++-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up debhelper (13.6) ... Setting up libxml-simple-perl (2.25-1) ... Setting up texinfo (6.8-4+b1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (12-20220222-1) ... Setting up libc6:armhf (2.33-7) ... Setting up libstdc++6:armhf (12-20220222-1) ... Setting up libkeyutils1:armhf (1.6.1-2) ... Setting up libssl1.1:armhf (1.1.1m-1) ... Setting up libcrypt1:armhf (1:4.4.27-1.1) ... Setting up libcom-err2:armhf (1.46.5-2) ... Setting up libgomp1:armhf (12-20220222-1) ... Setting up libkrb5support0:armhf (1.19.2-2) ... Setting up libasan5:armhf (9.4.0-5) ... Setting up libbpp-core4:armhf (2.4.1-7) ... Setting up libatomic1:armhf (12-20220222-1) ... Setting up libk5crypto3:armhf (1.19.2-2) ... Setting up libubsan1:armhf (12-20220222-1) ... Setting up libcrypt-dev:armhf (1:4.4.27-1.1) ... Setting up libkrb5-3:armhf (1.19.2-2) ... Setting up libbpp-seq12:armhf (2.4.1-7) ... Setting up libbpp-phyl12:armhf (2.4.1-6) ... Setting up libbpp-popgen8:armhf (2.4.1-6) ... Setting up libgcc-9-dev:armhf (9.4.0-5) ... Setting up libbpp-core-dev:armhf (2.4.1-7) ... Setting up libgssapi-krb5-2:armhf (1.19.2-2) ... Setting up libtirpc3:armhf (1.3.2-2) ... Setting up libbpp-seq-dev:armhf (2.4.1-7) ... Setting up libbpp-popgen-dev:armhf (2.4.1-6) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up libbpp-phyl-dev:armhf (2.4.1-6) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.33-7) ... Setting up libstdc++-9-dev:armhf (9.4.0-5) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.33-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.38-2 dpkg-dev_1.21.1 g++-11_11.2.0-17 gcc-11_11.2.0-17 libc6-dev_2.33-7 libstdc++-11-dev_11.2.0-17 libstdc++-11-dev-armhf-cross_11.2.0-16cross1 libstdc++-9-dev_9.4.0-5 libstdc++6_12-20220222-1 libstdc++6-armhf-cross_12-20220222-1cross1 linux-libc-dev_5.16.10-1 Package versions: adduser_3.118 apt_2.4.0 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 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gcc-11-arm-linux-gnueabihf_11.2.0-16cross1 gcc-11-arm-linux-gnueabihf-base_11.2.0-16cross1 gcc-11-base_11.2.0-17 gcc-11-cross-base_11.2.0-16cross1 gcc-12-base_12-20220222-1 gcc-12-cross-base_12-20220222-1cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-5 gcc-arm-linux-gnueabihf_4:11.2.0-2 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-3 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 init-system-helpers_1.62 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.4.0 libarchive-zip-perl_1.68-1 libarchive13_3.5.2-1 libasan5_9.4.0-5 libasan6_11.2.0-17 libasan6-armhf-cross_11.2.0-16cross1 libatomic1_12-20220222-1 libatomic1-armhf-cross_12-20220222-1cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1 libbinutils_2.38-2 libblkid1_2.37.3-1+b1 libbpp-core-dev_2.4.1-7 libbpp-core4_2.4.1-7 libbpp-phyl-dev_2.4.1-6 libbpp-phyl12_2.4.1-6 libbpp-popgen-dev_2.4.1-6 libbpp-popgen8_2.4.1-6 libbpp-seq-dev_2.4.1-7 libbpp-seq12_2.4.1-7 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libgdbm6_1.23-1 libglib2.0-0_2.70.4-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4+b1 libgomp1_12-20220222-1 libgomp1-armhf-cross_12-20220222-1cross1 libgpg-error0_1.43-3 libgssapi-krb5-2_1.19.2-2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.24-2 libitm1_12-20220222-1 libjsoncpp25_1.9.5-3 libk5crypto3_1.19.2-2 libkeyutils1_1.6.1-2 libkrb5-3_1.19.2-2 libkrb5support0_1.19.2-2 libldap-2.4-2_2.4.59+dfsg-1+b1 liblocale-gettext-perl_1.07-4+b2 liblsan0_12-20220222-1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.3-1+b1 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncurses6_6.3-2 libncursesw6_6.3-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libprocps8_2:3.3.17-6 libpsl5_0.21.0-1.2 libquadmath0_12-20220222-1 libreadline8_8.1.2-1 librhash0_1.4.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg2-3 libsasl2-modules-db_2.1.27+dfsg2-3 libseccomp2_2.5.3-2 libselinux1_3.3-1+b1 libsemanage-common_3.3-1 libsemanage1_3.1-2 libsemanage2_3.3-1+b1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1+b1 libss2_1.46.5-2 libssh2-1_1.10.0-2 libssl1.1_1.1.1m-1 libstdc++-11-dev_11.2.0-17 libstdc++-11-dev-armhf-cross_11.2.0-16cross1 libstdc++-9-dev_9.4.0-5 libstdc++6_12-20220222-1 libstdc++6-armhf-cross_12-20220222-1cross1 libsub-override-perl_0.09-2 libsystemd0_250.3-2 libtasn1-6_4.18.0-4 libtext-unidecode-perl_1.30-1 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-17 libubsan1_12-20220222-1 libubsan1-armhf-cross_12-20220222-1cross1 libuchardet0_0.0.7-1 libudev1_250.3-2 libunistring2_1.0-1 libuuid1_2.37.3-1+b1 libuv1_1.43.0-1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-6 libxxhash0_0.8.1-1 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.16.10-1 linux-libc-dev-armhf-cross_5.15.5-1cross1 login_1:4.11.1+dfsg1-1 logsave_1.46.5-2 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.1-1 mawk_1.3.4.20200120-3+b1 mount_2.37.3-1+b1 ncurses-base_6.3-2 ncurses-bin_6.3-2 passwd_1:4.11.1+dfsg1-1 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.28_5.28.1-6 perl-modules-5.34_5.34.0-3 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 procps_2:3.3.17-6 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tex-common_6.17 texinfo_6.8-4+b1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.3-1+b1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: bppsuite Binary: bppsuite, bppsuite-examples Architecture: any all Version: 2.4.1-4 Maintainer: Debian Med Packaging Team Uploaders: Julien Dutheil , Andreas Tille , Pranav Ballaney Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/bppsuite Vcs-Git: https://salsa.debian.org/med-team/bppsuite.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev Package-List: bppsuite deb science optional arch=any bppsuite-examples deb science optional arch=all Checksums-Sha1: 7ca13e39f3db596709d5eac1abee2f18c5147966 214404 bppsuite_2.4.1.orig.tar.gz 58dca6ab9681fcc6958858d9ed3045b3ddb27885 67820 bppsuite_2.4.1-4.debian.tar.xz Checksums-Sha256: 0485adcc17e37439069d27e4fac144e5ae38036ba21f31e6d21f070ce4ea5199 214404 bppsuite_2.4.1.orig.tar.gz 58846022e9b29545d84fb2d79d339e8e0717fc62444f90b3027b5b697c267265 67820 bppsuite_2.4.1-4.debian.tar.xz Files: d254ffd9e121b408aed36f49e62920d1 214404 bppsuite_2.4.1.orig.tar.gz d0e016130b3a42c61890a66651447aed 67820 bppsuite_2.4.1-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmIMrx0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG2CA/9F3cOZ1o1n64ozpw7CiKpUZhuoKL28Rt5 AfMQLRHkbiPcl2Ewdd1xpliZ3uz2GDTfapmirb3OJHH55HhugUPg2aEr1BX6whTJ hiR+HbDjVNbtqoXg8XNBKGuIzau+NeiFqbF4LEEbwgJbX3qLBefKVUP6PQX5Kho2 RzyI7CAewTg3Ur8FLQAcEWDulLaL93WiXw+LsOKdeCA1qaXt9wF+ipkxlQDHOPmN j7Q/PwRbtVeTEqR3ZifZik4dCR/TQU1hrUNXNOswI7PBu+LSOtmKXiO8NQ6Hrxgo gAZXzbmeq+yQoLw9q9TNd3wmVxUnd+m0cxIwzpVJd3Np+lAjtbOAPkaFKZueisDp tqmcx405aWKpLDX8ximzBfLEJM1TZSOtGbIXQHGOuY0s56UbWckfpHM5ePARJ6xW cuXD7dcKkkLdZD5Jtm0PNQVtp3xLejAMPsLcx8fgj9eh1UVkwQBOS3fteMjgmFgC Wyx7ivk3Twe7xxAQ0Boy0sLfK/Av+MBOokQadlifeY3NomKg328quaAdZY7gDjUu SoTsM6kei98E1QIiHQI+9nzuaCL8jE1h+MGkJTj3qqu4FPPQ9CvLJxshRtR5c7Qb YOHLtXv7viIxLGLyLdildM8cGsJ/FTyh3aBAPOKjRTtSfhysbSbSWPOWoV2T+U4/ LecgNiMZKXo= =Ngqy -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.9hHNG0Mp/trustedkeys.kbx': General error gpgv: Signature made Wed Feb 16 08:00:29 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./bppsuite_2.4.1-4.dsc dpkg-source: info: extracting bppsuite in /<> dpkg-source: info: unpacking bppsuite_2.4.1.orig.tar.gz dpkg-source: info: unpacking bppsuite_2.4.1-4.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-479e19fa-a2db-4d6b-9fde-315d1f437931 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package bppsuite dpkg-buildpackage: info: source version 2.4.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DCMAKE_BUILD_TYPE=RelWithDebInfo cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabihf-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabihf-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=RelWithDebInfo .. CMake Deprecation Warning at CMakeLists.txt:7 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The CXX compiler identification is GNU 11.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-phyl.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-popgen 8.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-popgen.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 -- includes: /usr/include -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabihf make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles /<>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppml.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 2%] Building CXX object bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o -MF CMakeFiles/bppml.dir/bppML.cpp.o.d -o CMakeFiles/bppml.dir/bppML.cpp.o -c /<>/bppSuite/bppML.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppML.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppML.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 5%] Linking CXX executable bppml cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppml.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppml.dir/bppML.cpp.o -o bppml /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 5%] Built target bppml make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppseqgen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 7%] Building CXX object bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -MF CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o.d -o CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -c /<>/bppSuite/bppSeqGen.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppSeqGen.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In constructor ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator > >; = void; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:653:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 653 | vector(_InputIterator __first, _InputIterator __last, | ^~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:653:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppSeqGen.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppSeqGen.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In function ‘void readTreesCoaSim(std::ifstream&, std::vector&, std::vector >&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/bppSuite/bppSeqGen.cpp: In function ‘int main(int, char**)’: /<>/bppSuite/bppSeqGen.cpp:550:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 550 | tmpRates = vector(rates.begin() + previousPos, rates.begin() + currentPos); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/bppSuite/bppSeqGen.cpp:575:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 575 | tmpRates = vector(rates.begin() + previousPos + 1, rates.begin() + currentPos); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Linking CXX executable bppseqgen cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppseqgen.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -o bppseqgen /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 10%] Built target bppseqgen make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppdist.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 13%] Building CXX object bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o -MF CMakeFiles/bppdist.dir/bppDist.cpp.o.d -o CMakeFiles/bppdist.dir/bppDist.cpp.o -c /<>/bppSuite/bppDist.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppDist.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppDist.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Linking CXX executable bppdist cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppdist.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppdist.dir/bppDist.cpp.o -o bppdist /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 15%] Built target bppdist make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpppars.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 18%] Building CXX object bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o -MF CMakeFiles/bpppars.dir/bppPars.cpp.o.d -o CMakeFiles/bpppars.dir/bppPars.cpp.o -c /<>/bppSuite/bppPars.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPars.cpp:51: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPars.cpp:51: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 21%] Linking CXX executable bpppars cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpppars.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpppars.dir/bppPars.cpp.o -o bpppars /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 21%] Built target bpppars make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppseqman.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 23%] Building CXX object bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -MF CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o.d -o CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -c /<>/bppSuite/bppSeqMan.cpp [ 26%] Linking CXX executable bppseqman cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppseqman.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -o bppseqman /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 26%] Built target bppseqman make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppconsense.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 28%] Building CXX object bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o -MF CMakeFiles/bppconsense.dir/bppConsense.cpp.o.d -o CMakeFiles/bppconsense.dir/bppConsense.cpp.o -c /<>/bppSuite/bppConsense.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppConsense.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppConsense.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 31%] Linking CXX executable bppconsense cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppconsense.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppconsense.dir/bppConsense.cpp.o -o bppconsense /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 31%] Built target bppconsense make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppancestor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 34%] Building CXX object bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -MF CMakeFiles/bppancestor.dir/bppAncestor.cpp.o.d -o CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -c /<>/bppSuite/bppAncestor.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppAncestor.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppAncestor.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 36%] Linking CXX executable bppancestor cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppancestor.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -o bppancestor /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 36%] Built target bppancestor make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppmixedlikelihoods.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 39%] Building CXX object bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -MF CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o.d -o CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -c /<>/bppSuite/bppMixedLikelihoods.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In function ‘int main(int, char**)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Linking CXX executable bppmixedlikelihoods cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppmixedlikelihoods.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -o bppmixedlikelihoods /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 42%] Built target bppmixedlikelihoods make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppreroot.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 44%] Building CXX object bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -MF CMakeFiles/bppreroot.dir/bppReRoot.cpp.o.d -o CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -c /<>/bppSuite/bppReRoot.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /<>/bppSuite/bppReRoot.cpp:48: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /<>/bppSuite/bppReRoot.cpp:48: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 47%] Linking CXX executable bppreroot cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppreroot.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -o bppreroot /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 47%] Built target bppreroot make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpptreedraw.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 50%] Building CXX object bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -MF CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o.d -o CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -c /<>/bppSuite/bppTreeDraw.cpp [ 52%] Linking CXX executable bpptreedraw cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpptreedraw.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -o bpptreedraw /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 52%] Built target bpptreedraw make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppalnscore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 55%] Building CXX object bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -MF CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o.d -o CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -c /<>/bppSuite/bppAlnScore.cpp [ 57%] Linking CXX executable bppalnscore cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppalnscore.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -o bppalnscore /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 57%] Built target bppalnscore make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpppopstats.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 60%] Building CXX object bppSuite/CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -MF CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o.d -o CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -c /<>/bppSuite/bppPopStats.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPopStats.cpp:52: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPopStats.cpp:52: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 63%] Linking CXX executable bpppopstats cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpppopstats.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -o bpppopstats /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 63%] Built target bpppopstats make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/doc /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/doc /<>/obj-arm-linux-gnueabihf/doc/CMakeFiles/info.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 65%] Generating info page cd /<>/obj-arm-linux-gnueabihf/doc && /usr/bin/makeinfo --no-split -o /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info /<>/doc/bppsuite.texi [ 68%] Compressing info page cd /<>/obj-arm-linux-gnueabihf/doc && /bin/gzip -c -n -9 /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info > /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info.gz make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 68%] Built target info make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/man /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/man /<>/obj-arm-linux-gnueabihf/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 71%] Compressing manpage bppalnscore.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppalnscore.1 > /<>/obj-arm-linux-gnueabihf/man/bppalnscore.1.gz [ 73%] Compressing manpage bppancestor.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppancestor.1 > /<>/obj-arm-linux-gnueabihf/man/bppancestor.1.gz [ 76%] Compressing manpage bppconsense.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppconsense.1 > /<>/obj-arm-linux-gnueabihf/man/bppconsense.1.gz [ 78%] Compressing manpage bppdist.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppdist.1 > /<>/obj-arm-linux-gnueabihf/man/bppdist.1.gz [ 81%] Compressing manpage bppmixedlikelihoods.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppmixedlikelihoods.1 > /<>/obj-arm-linux-gnueabihf/man/bppmixedlikelihoods.1.gz [ 84%] Compressing manpage bppml.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppml.1 > /<>/obj-arm-linux-gnueabihf/man/bppml.1.gz [ 86%] Compressing manpage bpppars.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bpppars.1 > /<>/obj-arm-linux-gnueabihf/man/bpppars.1.gz [ 89%] Compressing manpage bpppopstats.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bpppopstats.1 > /<>/obj-arm-linux-gnueabihf/man/bpppopstats.1.gz [ 92%] Compressing manpage bppreroot.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppreroot.1 > /<>/obj-arm-linux-gnueabihf/man/bppreroot.1.gz [ 94%] Compressing manpage bppseqgen.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppseqgen.1 > /<>/obj-arm-linux-gnueabihf/man/bppseqgen.1.gz [ 97%] Compressing manpage bppseqman.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bppseqman.1 > /<>/obj-arm-linux-gnueabihf/man/bppseqman.1.gz [100%] Compressing manpage bpptreedraw.1 cd /<>/obj-arm-linux-gnueabihf/man && /bin/gzip -c -n -9 /<>/man/bpptreedraw.1 > /<>/obj-arm-linux-gnueabihf/man/bpptreedraw.1.gz make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [100%] Built target man make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a cd obj-arm-linux-gnueabihf && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/debian/tmp/usr/bin/bppml -- Installing: /<>/debian/tmp/usr/bin/bppseqgen -- Installing: /<>/debian/tmp/usr/bin/bppdist -- Installing: /<>/debian/tmp/usr/bin/bpppars -- Installing: /<>/debian/tmp/usr/bin/bppseqman -- Installing: /<>/debian/tmp/usr/bin/bppconsense -- Installing: /<>/debian/tmp/usr/bin/bppancestor -- Installing: /<>/debian/tmp/usr/bin/bppmixedlikelihoods -- Installing: /<>/debian/tmp/usr/bin/bppreroot -- Installing: /<>/debian/tmp/usr/bin/bpptreedraw -- Installing: /<>/debian/tmp/usr/bin/bppalnscore -- Installing: /<>/debian/tmp/usr/bin/bpppopstats -- Installing: /<>/debian/tmp/usr/share/info/bppsuite.info.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppalnscore.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppancestor.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppconsense.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppdist.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppmixedlikelihoods.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppml.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpppars.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpppopstats.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppreroot.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppseqgen.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppseqman.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpptreedraw.1.gz make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -name "*.dnd" -exec chmod -x \{\} \; make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppreroot contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppconsense contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpppopstats contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppseqman contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpppars contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppancestor contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpptreedraw contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppmixedlikelihoods contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppdist contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppseqgen contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppml contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppalnscore contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'bppsuite' in '../bppsuite_2.4.1-4_armhf.deb'. dpkg-deb: building package 'bppsuite-dbgsym' in '../bppsuite-dbgsym_2.4.1-4_armhf.deb'. dpkg-genbuildinfo --build=any -O../bppsuite_2.4.1-4_armhf.buildinfo dpkg-genchanges --build=any -O../bppsuite_2.4.1-4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-02-25T01:29:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bppsuite_2.4.1-4_armhf.changes: ------------------------------- Format: 1.8 Date: Wed, 16 Feb 2022 08:50:02 +0100 Source: bppsuite Binary: bppsuite bppsuite-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.4.1-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: bppsuite - Bio++ program suite Changes: bppsuite (2.4.1-4) unstable; urgency=medium . * Fix watchfile to detect new versions on github * Exclude tag v3.0.0 to be considered a new version (see https://github.com/BioPP/bppsuite/issues/14#issuecomment-1041137412) * Standards-Version: 4.6.0 (routine-update) * Build-Depends: libeigen3-dev * Enable uscan to create a sensible download name Checksums-Sha1: 8ef11586d8001b624ba58db411fcb8b3c736240f 6563196 bppsuite-dbgsym_2.4.1-4_armhf.deb cacd068f28aec2b399da6c544826574f630745b4 6300 bppsuite_2.4.1-4_armhf.buildinfo 06d0ef30d34a95d9801ce75223cb3da8b08e1f7f 320600 bppsuite_2.4.1-4_armhf.deb Checksums-Sha256: 4f8712ddc6bf3c7b00dec32e5d9592ca0888396ed618a9aba53f964717b11d0a 6563196 bppsuite-dbgsym_2.4.1-4_armhf.deb e153b48c62c5a85119aaab40de4409d5c2e844054161371ea412541978120e71 6300 bppsuite_2.4.1-4_armhf.buildinfo 6ae8145254f9dc26a90994eeded72058a28e41b7621d9f23ea22530c90bf29da 320600 bppsuite_2.4.1-4_armhf.deb Files: e5ee4e6428938ec4b2d508810bc0223f 6563196 debug optional bppsuite-dbgsym_2.4.1-4_armhf.deb fb776219b417f137a7feb1d90dd19c57 6300 science optional bppsuite_2.4.1-4_armhf.buildinfo bc7c7d18953d827fb3ca13bf51fddd6a 320600 science optional bppsuite_2.4.1-4_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: bppsuite Binary: bppsuite bppsuite-dbgsym Architecture: armhf Version: 2.4.1-4 Checksums-Md5: e5ee4e6428938ec4b2d508810bc0223f 6563196 bppsuite-dbgsym_2.4.1-4_armhf.deb bc7c7d18953d827fb3ca13bf51fddd6a 320600 bppsuite_2.4.1-4_armhf.deb Checksums-Sha1: 8ef11586d8001b624ba58db411fcb8b3c736240f 6563196 bppsuite-dbgsym_2.4.1-4_armhf.deb 06d0ef30d34a95d9801ce75223cb3da8b08e1f7f 320600 bppsuite_2.4.1-4_armhf.deb Checksums-Sha256: 4f8712ddc6bf3c7b00dec32e5d9592ca0888396ed618a9aba53f964717b11d0a 6563196 bppsuite-dbgsym_2.4.1-4_armhf.deb 6ae8145254f9dc26a90994eeded72058a28e41b7621d9f23ea22530c90bf29da 320600 bppsuite_2.4.1-4_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 25 Feb 2022 01:29:29 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.5.52), bash (= 5.1-6), binutils (= 2.38-2), binutils-common (= 2.38-2), binutils-x86-64-linux-gnu (= 2.38-2), bsdextrautils (= 2.37.3-1+b1), bsdutils (= 1:2.37.3-1+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5), cmake (= 3.22.1-1+b1), cmake-data (= 3.22.1-1), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-17), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.6), debianutils (= 5.7-0.1), dh-autoreconf (= 20), dh-elpa-helper (= 2.0.10), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.1), dpkg-dev (= 1.21.1), dwz (= 0.14-1), emacsen-common (= 3.0.4), file (= 1:5.41-2), findutils (= 4.9.0-2), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-17), gcc (= 4:11.2.0-2), gcc-11 (= 11.2.0-17), gcc-11-base (= 11.2.0-17), gcc-12-base (= 12-20220222-1), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.62), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.5.2-1), libasan6 (= 11.2.0-17), libatomic1 (= 12-20220222-1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1), libbinutils (= 2.38-2), libblkid1 (= 2.37.3-1+b1), libbpp-core-dev (= 2.4.1-7), libbpp-core4 (= 2.4.1-7), libbpp-phyl-dev (= 2.4.1-6), libbpp-phyl12 (= 2.4.1-6), libbpp-popgen-dev (= 2.4.1-6), libbpp-popgen8 (= 2.4.1-6), libbpp-seq-dev (= 2.4.1-7), libbpp-seq12 (= 2.4.1-7), libbrotli1 (= 1.0.9-2+b3), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-7), libc-dev-bin (= 2.33-7), libc6 (= 2.33-7), libc6-dev (= 2.33-7), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 12-20220222-1), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1.1), libcrypt1 (= 1:4.4.27-1.1), libctf-nobfd0 (= 2.38-2), libctf0 (= 2.38-2), libcurl4 (= 7.81.0-1), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.6), libdpkg-perl (= 1.21.1), libeigen3-dev (= 3.4.0-2), libelf1 (= 0.186-1), libexpat1 (= 2.4.6-1), libffi8 (= 3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.2.0-17), libgcc-s1 (= 12-20220222-1), libgcrypt20 (= 1.9.4-5), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libglib2.0-0 (= 2.70.4-1), libgmp10 (= 2:6.2.1+dfsg-3), libgnutls30 (= 3.7.3-4+b1), libgomp1 (= 12-20220222-1), libgpg-error0 (= 1.43-3), libgssapi-krb5-2 (= 1.19.2-2), libhogweed6 (= 3.7.3-1), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 12-20220222-1), libjsoncpp25 (= 1.9.5-3), libk5crypto3 (= 1.19.2-2), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.19.2-2), libkrb5support0 (= 1.19.2-2), libldap-2.4-2 (= 2.4.59+dfsg-1+b1), liblsan0 (= 12-20220222-1), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmount1 (= 2.37.3-1+b1), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.3-2), libncursesw6 (= 6.3-2), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.0-6), libpam-modules (= 1.4.0-11), libpam-modules-bin (= 1.4.0-11), libpam-runtime (= 1.4.0-11), libpam0g (= 1.4.0-11), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libperl5.34 (= 5.34.0-3), libpipeline1 (= 1.5.5-1), libprocps8 (= 2:3.3.17-6), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 12-20220222-1), librhash0 (= 1.4.2-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg2-3), libsasl2-modules-db (= 2.1.27+dfsg2-3), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b1), libsigsegv2 (= 2.14-1), libsmartcols1 (= 2.37.3-1+b1), libssh2-1 (= 1.10.0-2), libssl1.1 (= 1.1.1m-1), libstdc++-11-dev (= 11.2.0-17), libstdc++6 (= 12-20220222-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 250.3-2), libtasn1-6 (= 4.18.0-4), libtext-unidecode-perl (= 1.30-1), libtinfo6 (= 6.3-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-17), libubsan1 (= 12-20220222-1), libuchardet0 (= 0.0.7-1), libudev1 (= 250.3-2), libunistring2 (= 1.0-1), libuuid1 (= 2.37.3-1+b1), libuv1 (= 1.43.0-1), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-1), libxml-namespacesupport-perl (= 1.12-1.1), libxml-sax-base-perl (= 1.09-1.1), libxml-sax-perl (= 1.02+dfsg-3), libxml2 (= 2.9.12+dfsg-6), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.16.10-1), login (= 1:4.11.1+dfsg1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.10.1-1), mawk (= 1.3.4.20200120-3+b1), ncurses-base (= 6.3-2), ncurses-bin (= 6.3-2), patch (= 2.7.6-7), perl (= 5.34.0-3), perl-base (= 5.34.0-3), perl-modules-5.34 (= 5.34.0-3), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-6), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.01-1), tar (= 1.34+dfsg-1), tex-common (= 6.17), texinfo (= 6.8-4+b1), ucf (= 3.0043), util-linux (= 2.37.3-1+b1), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1644997802" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ bppsuite-dbgsym_2.4.1-4_armhf.deb --------------------------------- new Debian package, version 2.0. size 6563196 bytes: control archive=1144 bytes. 826 bytes, 12 lines control 1360 bytes, 13 lines md5sums Package: bppsuite-dbgsym Source: bppsuite Version: 2.4.1-4 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 7007 Depends: bppsuite (= 2.4.1-4) Section: debug Priority: optional Description: debug symbols for bppsuite Build-Ids: 0742d8386d6c710f5a50c798af7d88961ca63371 28eb1be36596ba9f31c1a4181fe7bacd0af71cd5 369d794fec382dbc9e1ef45ba97887ab94580577 4472d30d7c5e6f772161ec26e26ac008330aa4d3 4e0d0b5d59f438b3ed3811210caa534cb9ded9db 609816ac09e02db0681b88a59747a6067f3ee101 666c2dc00c7d93ba856dcd3e617ca59c6e104cad b1090138ba22af593ea8013a54ceeaf1b19e8c45 b7e0a0f17dcd01687ad55fc992c090fe0b7bb7f8 c555542fdf22ba3133e8e91eb539c3b127afa205 d48074379c3757b9c451606ecb7d124a12f4a718 d7db3aab07b0f3df378f45b64b1f6b5ddf8802cb drwxr-xr-x root/root 0 2022-02-16 07:50 ./ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/07/ -rw-r--r-- root/root 743104 2022-02-16 07:50 ./usr/lib/debug/.build-id/07/42d8386d6c710f5a50c798af7d88961ca63371.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/28/ -rw-r--r-- root/root 386512 2022-02-16 07:50 ./usr/lib/debug/.build-id/28/eb1be36596ba9f31c1a4181fe7bacd0af71cd5.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/36/ -rw-r--r-- root/root 539716 2022-02-16 07:50 ./usr/lib/debug/.build-id/36/9d794fec382dbc9e1ef45ba97887ab94580577.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/44/ -rw-r--r-- root/root 464848 2022-02-16 07:50 ./usr/lib/debug/.build-id/44/72d30d7c5e6f772161ec26e26ac008330aa4d3.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/4e/ -rw-r--r-- root/root 898976 2022-02-16 07:50 ./usr/lib/debug/.build-id/4e/0d0b5d59f438b3ed3811210caa534cb9ded9db.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/60/ -rw-r--r-- root/root 663336 2022-02-16 07:50 ./usr/lib/debug/.build-id/60/9816ac09e02db0681b88a59747a6067f3ee101.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/66/ -rw-r--r-- root/root 589120 2022-02-16 07:50 ./usr/lib/debug/.build-id/66/6c2dc00c7d93ba856dcd3e617ca59c6e104cad.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/b1/ -rw-r--r-- root/root 309484 2022-02-16 07:50 ./usr/lib/debug/.build-id/b1/090138ba22af593ea8013a54ceeaf1b19e8c45.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/b7/ -rw-r--r-- root/root 629064 2022-02-16 07:50 ./usr/lib/debug/.build-id/b7/e0a0f17dcd01687ad55fc992c090fe0b7bb7f8.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/c5/ -rw-r--r-- root/root 625448 2022-02-16 07:50 ./usr/lib/debug/.build-id/c5/55542fdf22ba3133e8e91eb539c3b127afa205.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/d4/ -rw-r--r-- root/root 318828 2022-02-16 07:50 ./usr/lib/debug/.build-id/d4/8074379c3757b9c451606ecb7d124a12f4a718.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.build-id/d7/ -rw-r--r-- root/root 479724 2022-02-16 07:50 ./usr/lib/debug/.build-id/d7/db3aab07b0f3df378f45b64b1f6b5ddf8802cb.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/ -rw-r--r-- root/root 497508 2022-02-16 07:50 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/bppsuite.debug drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-02-16 07:50 ./usr/share/doc/bppsuite-dbgsym -> bppsuite bppsuite_2.4.1-4_armhf.deb -------------------------- new Debian package, version 2.0. size 320600 bytes: control archive=1880 bytes. 1582 bytes, 33 lines control 1887 bytes, 30 lines md5sums Package: bppsuite Version: 2.4.1-4 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1254 Depends: libbpp-core4 (>= 2.4.1), libbpp-phyl12 (>= 2.4.1), libbpp-popgen8 (>= 2.4.1), libbpp-seq12 (>= 2.4.1), libc6 (>= 2.32), libgcc-s1 (>= 3.5), libstdc++6 (>= 11) Suggests: bppsuite-examples Section: science Priority: optional Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Description: Bio++ program suite The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software. . The following programs are included: - BppML for maximum likelihood analysis, - BppSeqGen for sequences simulation, - BppAncestor for ancestral states reconstruction, - BppDist for distance methods, - BppPars for parsimony analysis, - BppSeqMan for file conversion and sequence manipulation, - BppConsense for building consensus tree and computing bootstrap values, - BppReRoot for tree rerooting. - BppTreeDraw for tree drawing. - BppAlnScore for comparing alignments and computing alignment scores. - BppMixedLikelihoods for computing site per site likelihoods of components of mixture models. - BppPopGen for population genetics analyses. drwxr-xr-x root/root 0 2022-02-16 07:50 ./ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/bin/ -rwxr-xr-x root/root 46740 2022-02-16 07:50 ./usr/bin/bppalnscore -rwxr-xr-x root/root 124564 2022-02-16 07:50 ./usr/bin/bppancestor -rwxr-xr-x root/root 63124 2022-02-16 07:50 ./usr/bin/bppconsense -rwxr-xr-x root/root 153236 2022-02-16 07:50 ./usr/bin/bppdist -rwxr-xr-x root/root 91796 2022-02-16 07:50 ./usr/bin/bppmixedlikelihoods -rwxr-xr-x root/root 149140 2022-02-16 07:50 ./usr/bin/bppml -rwxr-xr-x root/root 75412 2022-02-16 07:50 ./usr/bin/bpppars -rwxr-xr-x root/root 169620 2022-02-16 07:50 ./usr/bin/bpppopstats -rwxr-xr-x root/root 75412 2022-02-16 07:50 ./usr/bin/bppreroot -rwxr-xr-x root/root 140948 2022-02-16 07:50 ./usr/bin/bppseqgen -rwxr-xr-x root/root 50836 2022-02-16 07:50 ./usr/bin/bppseqman -rwxr-xr-x root/root 54932 2022-02-16 07:50 ./usr/bin/bpptreedraw drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/doc/bppsuite/ -rw-r--r-- root/root 278 2022-02-16 07:50 ./usr/share/doc/bppsuite/README.test -rw-r--r-- root/root 94 2022-02-16 07:50 ./usr/share/doc/bppsuite/README.test_data -rw-r--r-- root/root 1994 2022-02-16 07:50 ./usr/share/doc/bppsuite/changelog.Debian.gz -rw-r--r-- root/root 2541 2018-08-16 09:31 ./usr/share/doc/bppsuite/changelog.gz -rw-r--r-- root/root 23164 2022-02-16 07:50 ./usr/share/doc/bppsuite/copyright drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/info/ -rw-r--r-- root/root 29945 2022-02-16 07:50 ./usr/share/info/bppsuite.info.gz drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/man/ drwxr-xr-x root/root 0 2022-02-16 07:50 ./usr/share/man/man1/ -rw-r--r-- root/root 402 2022-02-16 07:50 ./usr/share/man/man1/bppalnscore.1.gz -rw-r--r-- root/root 390 2022-02-16 07:50 ./usr/share/man/man1/bppancestor.1.gz -rw-r--r-- root/root 361 2022-02-16 07:50 ./usr/share/man/man1/bppconsense.1.gz -rw-r--r-- root/root 383 2022-02-16 07:50 ./usr/share/man/man1/bppdist.1.gz -rw-r--r-- root/root 494 2022-02-16 07:50 ./usr/share/man/man1/bppmixedlikelihoods.1.gz -rw-r--r-- root/root 370 2022-02-16 07:50 ./usr/share/man/man1/bppml.1.gz -rw-r--r-- root/root 361 2022-02-16 07:50 ./usr/share/man/man1/bpppars.1.gz -rw-r--r-- root/root 371 2022-02-16 07:50 ./usr/share/man/man1/bpppopstats.1.gz -rw-r--r-- root/root 357 2022-02-16 07:50 ./usr/share/man/man1/bppreroot.1.gz -rw-r--r-- root/root 388 2022-02-16 07:50 ./usr/share/man/man1/bppseqgen.1.gz -rw-r--r-- root/root 465 2022-02-16 07:50 ./usr/share/man/man1/bppseqman.1.gz -rw-r--r-- root/root 429 2022-02-16 07:50 ./usr/share/man/man1/bpptreedraw.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [563 B] Get:5 copy:/<>/apt_archive ./ Packages [651 B] Fetched 2177 B in 0s (80.1 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. 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Setting up libnetaddr-ip-perl (4.079+dfsg-1+b6) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.21-1+b1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1.1) ... Setting up libperlio-utf8-strict-perl (0.009-1+b1) ... Setting up libio-prompt-tiny-perl (0.003-1) ... Setting up lzip (1.23-1) ... update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.lzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b4) ... Setting up libb-hooks-op-check-perl (0.22-1+b4) ... Setting up liblist-moreutils-xs-perl (0.430-2+b1) ... Setting up libparams-util-perl (1.102-1+b2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b2) ... Setting up libsyntax-keyword-try-perl (0.26-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.27-3) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b8) ... Setting up libsort-versions-perl (1.62-1) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libterm-readkey-perl (2.38-1+b3) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b9) ... Setting up libperlio-gzip-perl (0.19-1+b8) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.023+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.27-3) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b4) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b4) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.25-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.114.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.10.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.33-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 123152 Build-Time: 133 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 26 Job: bppsuite_2.4.1-4 Lintian: pass Machine Architecture: amd64 Package: bppsuite Package-Time: 173 Source-Version: 2.4.1-4 Space: 123152 Status: successful Version: 2.4.1-4 -------------------------------------------------------------------------------- Finished at 2022-02-25T01:29:30Z Build needed 00:02:53, 123152k disk space