sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | bppsuite 2.4.1-6 (armhf) Mon, 16 Jan 2023 09:32:52 +0000 | +==============================================================================+ Package: bppsuite Version: 2.4.1-6 Source Version: 2.4.1-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-28e09a8d-8975-4755-a463-7d2cffad8909' with '<>' I: NOTICE: Log filtering will replace 'build/bppsuite-5kWjpt/resolver-KXnE1b' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [161 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-01-16-0808.51-F-2023-01-16-0203.33.pdiff [17.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-01-16-0808.51-F-2023-01-16-0203.33.pdiff [68.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-01-16-0808.51-F-2023-01-16-0203.33.pdiff [17.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-01-16-0808.51-F-2023-01-16-0203.33.pdiff [68.6 kB] Get:6 http://localhost:3142/debian sid/main armhf Packages [9062 kB] Fetched 9436 kB in 3s (3646 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'bppsuite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/bppsuite.git Please use: git clone https://salsa.debian.org/med-team/bppsuite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 285 kB of source archives. Get:1 http://localhost:3142/debian sid/main bppsuite 2.4.1-6 (dsc) [2211 B] Get:2 http://localhost:3142/debian sid/main bppsuite 2.4.1-6 (tar) [214 kB] Get:3 http://localhost:3142/debian sid/main bppsuite 2.4.1-6 (diff) [68.4 kB] Fetched 285 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/bppsuite-5kWjpt/bppsuite-2.4.1' with '<>' I: NOTICE: Log filtering will replace 'build/bppsuite-5kWjpt' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [434 B] Get:5 copy:/<>/apt_archive ./ Packages [523 B] Fetched 1914 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cmake cmake-data cpp-12-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-base:armhf gcc-12-arm-linux-gnueabihf gcc-12-arm-linux-gnueabihf-base gcc-12-base:armhf gcc-12-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan6:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbpp-core-dev:armhf libbpp-core4:armhf libbpp-phyl-dev:armhf libbpp-phyl12:armhf libbpp-popgen-dev:armhf libbpp-popgen8:armhf libbpp-seq-dev:armhf libbpp-seq12:armhf libbrotli1 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armhf libgcc-12-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu72 libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1 libncursesw6 libnghttp2-14 libnsl-dev:armhf libnsl2:armhf libpipeline1 libpkgconf3 libproc2-0 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:armhf libstdc++-11-dev:armhf libstdc++-12-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtext-unidecode-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db pkg-config pkgconf pkgconf-bin po-debconf procps sensible-utils tex-common texinfo ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode ninja-build gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf libeigen3-doc libmpfrc++-dev krb5-doc:armhf krb5-user:armhf libstdc++-11-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended Recommended packages: curl | wget | lynx libidn2-0:armhf ca-certificates libarchive-cpio-perl krb5-locales:armhf libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cmake cmake-data cpp-12-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-base:armhf gcc-12-arm-linux-gnueabihf gcc-12-arm-linux-gnueabihf-base gcc-12-base:armhf gcc-12-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan6:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libbpp-core-dev:armhf libbpp-core4:armhf libbpp-phyl-dev:armhf libbpp-phyl12:armhf libbpp-popgen-dev:armhf libbpp-popgen8:armhf libbpp-seq-dev:armhf libbpp-seq12:armhf libbrotli1 libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libeigen3-dev libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armhf libgcc-12-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu72 libio-string-perl libjsoncpp25 libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1 libncursesw6 libnghttp2-14 libnsl-dev:armhf libnsl2:armhf libpipeline1 libpkgconf3 libproc2-0 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1 libssl3:armhf libstdc++-11-dev:armhf libstdc++-12-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtext-unidecode-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db pkg-config pkgconf pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy:armhf sensible-utils tex-common texinfo ucf 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 107 MB of archives. After this operation, 455 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.4-1 [134 kB] Get:4 http://localhost:3142/debian sid/main amd64 libproc2-0 amd64 2:4.0.2-3 [62.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 procps amd64 2:4.0.2-3 [709 kB] Get:6 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-2 [305 kB] Get:8 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-2 [104 kB] Get:9 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-2 [42.4 kB] Get:10 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-10 [160 kB] Get:11 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:12 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-9 [916 kB] Get:13 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-4 [86.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:15 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-1 [1386 kB] Get:16 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:17 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-2 [287 kB] Get:18 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:19 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:21 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-10 [495 kB] Get:22 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabihf amd64 2.40-2 [3229 kB] Get:23 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:24 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b2 [687 kB] Get:25 http://localhost:3142/debian sid/main amd64 libarchive13 amd64 3.6.2-1 [343 kB] Get:26 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b5 [279 kB] Get:27 http://localhost:3142/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:28 http://localhost:3142/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:29 http://localhost:3142/debian sid/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-3 [183 kB] Get:30 http://localhost:3142/debian sid/main amd64 libnghttp2-14 amd64 1.51.0-1 [71.5 kB] Get:31 http://localhost:3142/debian sid/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:32 http://localhost:3142/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:33 http://localhost:3142/debian sid/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:34 http://localhost:3142/debian sid/main amd64 libcurl4 amd64 7.87.0-2 [376 kB] Get:35 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:36 http://localhost:3142/debian sid/main amd64 libjsoncpp25 amd64 1.9.5-4 [78.6 kB] Get:37 http://localhost:3142/debian sid/main amd64 librhash0 amd64 1.4.3-3 [134 kB] Get:38 http://localhost:3142/debian sid/main amd64 libuv1 amd64 1.44.2-1 [140 kB] Get:39 http://localhost:3142/debian sid/main amd64 cmake-data all 3.25.1-1 [2026 kB] Get:40 http://localhost:3142/debian sid/main amd64 cmake amd64 3.25.1-1 [8692 kB] Get:41 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabihf-base amd64 12.2.0-14cross1 [37.7 kB] Get:42 http://localhost:3142/debian sid/main amd64 cpp-12-arm-linux-gnueabihf amd64 12.2.0-14cross1 [8666 kB] Get:43 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabihf amd64 4:12.2.0-3 [3984 B] Get:44 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:45 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-14cross1 [33.2 kB] Get:46 http://localhost:3142/debian sid/main amd64 libc6-armhf-cross all 2.36-8cross1 [871 kB] Get:47 http://localhost:3142/debian sid/main amd64 libgcc-s1-armhf-cross all 12.2.0-14cross1 [36.5 kB] Get:48 http://localhost:3142/debian sid/main amd64 libgomp1-armhf-cross all 12.2.0-14cross1 [94.6 kB] Get:49 http://localhost:3142/debian sid/main amd64 libatomic1-armhf-cross all 12.2.0-14cross1 [6688 B] Get:50 http://localhost:3142/debian sid/main amd64 libasan8-armhf-cross all 12.2.0-14cross1 [2113 kB] Get:51 http://localhost:3142/debian sid/main amd64 libstdc++6-armhf-cross all 12.2.0-14cross1 [476 kB] Get:52 http://localhost:3142/debian sid/main amd64 libubsan1-armhf-cross all 12.2.0-14cross1 [855 kB] Get:53 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-armhf-cross all 12.2.0-14cross1 [742 kB] Get:54 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabihf amd64 12.2.0-14cross1 [17.0 MB] Get:55 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabihf amd64 4:12.2.0-3 [1480 B] Get:56 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armhf-cross all 6.1.4-1cross1 [1800 kB] Get:57 http://localhost:3142/debian sid/main amd64 libc6-dev-armhf-cross all 2.36-8cross1 [1262 kB] Get:58 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-armhf-cross all 12.2.0-14cross1 [2036 kB] Get:59 http://localhost:3142/debian sid/main amd64 g++-12-arm-linux-gnueabihf amd64 12.2.0-14cross1 [9593 kB] Get:60 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabihf amd64 4:12.2.0-3 [1180 B] Get:61 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:62 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:63 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:64 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:65 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:66 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:67 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:68 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:69 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:71 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:72 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:73 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:74 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:75 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:76 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:77 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:78 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:79 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:80 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:81 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:82 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:83 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:84 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-10 [1300 kB] Get:85 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:86 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:87 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.4 [942 kB] Get:88 http://localhost:3142/debian sid/main armhf gcc-11-base armhf 11.3.0-11 [38.2 kB] Get:89 http://localhost:3142/debian sid/main armhf gcc-12-base armhf 12.2.0-14 [37.5 kB] Get:90 http://localhost:3142/debian sid/main armhf libgcc-s1 armhf 12.2.0-14 [36.6 kB] Get:91 http://localhost:3142/debian sid/main armhf libc6 armhf 2.36-8 [2195 kB] Get:92 http://localhost:3142/debian sid/main armhf libasan6 armhf 11.3.0-11 [1970 kB] Get:93 http://localhost:3142/debian sid/main armhf libatomic1 armhf 12.2.0-14 [7016 B] Get:94 http://localhost:3142/debian sid/main armhf libstdc++6 armhf 12.2.0-14 [519 kB] Get:95 http://localhost:3142/debian sid/main armhf libbpp-core4 armhf 2.4.1-9 [501 kB] Get:96 http://localhost:3142/debian sid/main armhf libbpp-core-dev armhf 2.4.1-9 [943 kB] Get:97 http://localhost:3142/debian sid/main armhf libbpp-seq12 armhf 2.4.1-9 [420 kB] Get:98 http://localhost:3142/debian sid/main armhf libbpp-phyl12 armhf 2.4.1-8 [1384 kB] Get:99 http://localhost:3142/debian sid/main armhf libbpp-seq-dev armhf 2.4.1-9 [733 kB] Get:100 http://localhost:3142/debian sid/main armhf libbpp-phyl-dev armhf 2.4.1-8 [3095 kB] Get:101 http://localhost:3142/debian sid/main armhf libbpp-popgen8 armhf 2.4.1-8 [194 kB] Get:102 http://localhost:3142/debian sid/main armhf libbpp-popgen-dev armhf 2.4.1-8 [283 kB] Get:103 http://localhost:3142/debian sid/main armhf linux-libc-dev armhf 6.1.4-1 [1671 kB] Get:104 http://localhost:3142/debian sid/main armhf libcrypt1 armhf 1:4.4.33-2 [95.6 kB] Get:105 http://localhost:3142/debian sid/main armhf libcrypt-dev armhf 1:4.4.33-2 [125 kB] Get:106 http://localhost:3142/debian sid/main armhf libcom-err2 armhf 1.46.6~rc1-1.1 [15.4 kB] Get:107 http://localhost:3142/debian sid/main armhf libkrb5support0 armhf 1.20.1-1 [29.2 kB] Get:108 http://localhost:3142/debian sid/main armhf libk5crypto3 armhf 1.20.1-1 [74.4 kB] Get:109 http://localhost:3142/debian sid/main armhf libkeyutils1 armhf 1.6.3-2 [7832 B] Get:110 http://localhost:3142/debian sid/main armhf libssl3 armhf 3.0.7-1 [1656 kB] Get:111 http://localhost:3142/debian sid/main armhf libkrb5-3 armhf 1.20.1-1 [287 kB] Get:112 http://localhost:3142/debian sid/main armhf libgssapi-krb5-2 armhf 1.20.1-1 [111 kB] Get:113 http://localhost:3142/debian sid/main armhf libtirpc3 armhf 1.3.3+ds-1 [72.9 kB] Get:114 http://localhost:3142/debian sid/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:115 http://localhost:3142/debian sid/main armhf libtirpc-dev armhf 1.3.3+ds-1 [182 kB] Get:116 http://localhost:3142/debian sid/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:117 http://localhost:3142/debian sid/main armhf libc6-dev armhf 2.36-8 [1265 kB] Get:118 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.0-12 [35.8 kB] Get:119 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.0-12 [29.2 kB] Get:120 http://localhost:3142/debian sid/main amd64 pkgconf amd64 1.8.0-12 [25.7 kB] Get:121 http://localhost:3142/debian sid/main amd64 pkg-config amd64 1.8.0-12 [13.5 kB] Get:122 http://localhost:3142/debian sid/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get:123 http://localhost:3142/debian sid/main armhf libgomp1 armhf 12.2.0-14 [97.0 kB] Get:124 http://localhost:3142/debian sid/main armhf libubsan1 armhf 12.2.0-14 [855 kB] Get:125 http://localhost:3142/debian sid/main armhf libgcc-11-dev armhf 11.3.0-11 [712 kB] Get:126 http://localhost:3142/debian sid/main armhf libstdc++-11-dev armhf 11.3.0-11 [1981 kB] Get:127 http://localhost:3142/debian sid/main amd64 libtext-unidecode-perl all 1.30-3 [101 kB] Get:128 http://localhost:3142/debian sid/main amd64 tex-common all 6.18 [32.5 kB] Get:129 http://localhost:3142/debian sid/main amd64 texinfo amd64 6.8-6+b1 [1816 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 107 MB in 1s (87.3 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15192 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../001-libncursesw6_6.4-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.4-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.2-3_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.2-3_amd64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.44-2_amd64.deb ... Unpacking libmagic-mgc (1:5.44-2) ... 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-s1-armhf-cross (12.2.0-14cross1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:amd64 (1.0.9-2+b5) ... Setting up libnghttp2-14:amd64 (1.51.0-1) ... Setting up libmagic1:amd64 (1:5.44-2) ... Setting up linux-libc-dev:armhf (6.1.4-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-10) ... Setting up m4 (1.4.19-2) ... Setting up file (1:5.44-2) ... Setting up libatomic1-armhf-cross (12.2.0-14cross1) ... Setting up libyaml-perl (1.30-2) ... Setting up gcc-12-base:armhf (12.2.0-14) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libpkgconf3:amd64 (1.8.0-12) ... Setting up libuv1:amd64 (1.44.2-1) ... Setting up libstdc++6-armhf-cross (12.2.0-14cross1) ... Setting up gcc-12-arm-linux-gnueabihf-base:amd64 (12.2.0-14cross1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libproc2-0:amd64 (2:4.0.2-3) ... Setting up linux-libc-dev-armhf-cross (6.1.4-1cross1) ... Setting up autopoint (0.21-10) ... Setting up libjsoncpp25:amd64 (1.9.5-4) ... Setting up libubsan1-armhf-cross (12.2.0-14cross1) ... Setting up pkgconf-bin (1.8.0-12) ... Setting up libncursesw6:amd64 (6.4-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:amd64 (1.4.3-3) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libtext-unidecode-perl (1.30-3) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up binutils-arm-linux-gnueabihf (2.40-2) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgomp1-armhf-cross (12.2.0-14cross1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libasan8-armhf-cross (12.2.0-14cross1) ... Setting up gettext (0.21-10) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:amd64 (3.6.2-1) ... Setting up libc6-dev-armhf-cross (2.36-8cross1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Setting up pkgconf:amd64 (1.8.0-12) ... Setting up cpp-12-arm-linux-gnueabihf (12.2.0-14cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up pkg-config:amd64 (1.8.0-12) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up libgcc-12-dev-armhf-cross (12.2.0-14cross1) ... Setting up groff-base (1.22.4-9) ... Setting up libcurl4:amd64 (7.87.0-2) ... Setting up cpp-arm-linux-gnueabihf (4:12.2.0-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libstdc++-12-dev-armhf-cross (12.2.0-14cross1) ... Setting up gcc-12-arm-linux-gnueabihf (12.2.0-14cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.25.1-1) ... Setting up gcc-arm-linux-gnueabihf (4:12.2.0-3) ... Setting up g++-12-arm-linux-gnueabihf (12.2.0-14cross1) ... Setting up debhelper (13.11.4) ... Setting up libxml-simple-perl (2.25-2) ... Setting up texinfo (6.8-6+b1) ... Setting up g++-arm-linux-gnueabihf (4:12.2.0-3) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (12.2.0-14) ... Setting up libc6:armhf (2.36-8) ... Setting up libstdc++6:armhf (12.2.0-14) ... Setting up libkeyutils1:armhf (1.6.3-2) ... Setting up libssl3:armhf (3.0.7-1) ... Setting up libcrypt1:armhf (1:4.4.33-2) ... Setting up libcom-err2:armhf (1.46.6~rc1-1.1) ... Setting up libgomp1:armhf (12.2.0-14) ... Setting up libasan6:armhf (11.3.0-11) ... Setting up libkrb5support0:armhf (1.20.1-1) ... Setting up libbpp-core4:armhf (2.4.1-9) ... Setting up libatomic1:armhf (12.2.0-14) ... Setting up libk5crypto3:armhf (1.20.1-1) ... Setting up libubsan1:armhf (12.2.0-14) ... Setting up libgcc-11-dev:armhf (11.3.0-11) ... Setting up libcrypt-dev:armhf (1:4.4.33-2) ... Setting up libkrb5-3:armhf (1.20.1-1) ... Setting up libbpp-seq12:armhf (2.4.1-9) ... Setting up libbpp-phyl12:armhf (2.4.1-8) ... Setting up libbpp-popgen8:armhf (2.4.1-8) ... Setting up libbpp-core-dev:armhf (2.4.1-9) ... Setting up libgssapi-krb5-2:armhf (1.20.1-1) ... Setting up libtirpc3:armhf (1.3.3+ds-1) ... Setting up libbpp-seq-dev:armhf (2.4.1-9) ... Setting up libbpp-popgen-dev:armhf (2.4.1-8) ... Setting up libtirpc-dev:armhf (1.3.3+ds-1) ... Setting up libbpp-phyl-dev:armhf (2.4.1-8) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.36-8) ... Setting up libstdc++-11-dev:armhf (11.3.0-11) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.36-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) amd64 (x86_64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.18 g++-11_11.3.0-11 g++-12_12.2.0-14 gcc-11_11.3.0-11 gcc-12_12.2.0-14 libc6-dev_2.36-8 libstdc++-11-dev_11.3.0-11 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-armhf-cross_12.2.0-14cross1 libstdc++6_12.2.0-14 libstdc++6-armhf-cross_12.2.0-14cross1 linux-libc-dev_6.1.4-1 Package versions: adduser_3.130 apt_2.5.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3 base-passwd_3.6.1 bash_5.2.15-2 binutils_2.40-2 binutils-arm-linux-gnueabihf_2.40-2 binutils-common_2.40-2 binutils-x86-64-linux-gnu_2.40-2 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b1 cmake_3.25.1-1 cmake-data_3.25.1-1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-11_11.3.0-11 cpp-12_12.2.0-14 cpp-12-arm-linux-gnueabihf_12.2.0-14cross1 cpp-arm-linux-gnueabihf_4:12.2.0-3 cross-config_2.6.20 crossbuild-essential-armhf_12.9 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2021.1.1 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-3 dpkg_1.21.18 dpkg-cross_2.6.20 dpkg-dev_1.21.18 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1.1 fakeroot_1.30.1-1.1 file_1:5.44-2 findutils_4.9.0-4 g++_4:12.2.0-3 g++-11_11.3.0-11 g++-12_12.2.0-14 g++-12-arm-linux-gnueabihf_12.2.0-14cross1 g++-arm-linux-gnueabihf_4:12.2.0-3 gcc_4:12.2.0-3 gcc-11_11.3.0-11 gcc-11-base_11.3.0-11 gcc-12_12.2.0-14 gcc-12-arm-linux-gnueabihf_12.2.0-14cross1 gcc-12-arm-linux-gnueabihf-base_12.2.0-14cross1 gcc-12-base_12.2.0-14 gcc-12-cross-base_12.2.0-14cross1 gcc-9-base_9.5.0-2+b3 gcc-arm-linux-gnueabihf_4:12.2.0-3 gettext_0.21-10 gettext-base_0.21-10 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libarchive13_3.6.2-1 libasan6_11.3.0-11 libasan8_12.2.0-14 libasan8-armhf-cross_12.2.0-14cross1 libatomic1_12.2.0-14 libatomic1-armhf-cross_12.2.0-14cross1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1+b2 libbinutils_2.40-2 libblkid1_2.38.1-4 libbpp-core-dev_2.4.1-9 libbpp-core4_2.4.1-9 libbpp-phyl-dev_2.4.1-8 libbpp-phyl12_2.4.1-8 libbpp-popgen-dev_2.4.1-8 libbpp-popgen8_2.4.1-8 libbpp-seq-dev_2.4.1-9 libbpp-seq12_2.4.1-9 libbrotli1_1.0.9-2+b5 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-8 libc-dev-bin_2.36-8 libc6_2.36-8 libc6-armhf-cross_2.36-8cross1 libc6-dev_2.36-8 libc6-dev-armhf-cross_2.36-8cross1 libcap-ng0_0.8.3-1+b2 libcap2_1:2.66-3 libcc1-0_12.2.0-14 libcom-err2_1.46.6~rc1-1.1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2 libctf0_2.40-2 libcurl4_7.87.0-2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.266 libdebhelper-perl_13.11.4 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.21.18 libeigen3-dev_3.4.0-4 libelf1_0.188-2.1 libexpat1_2.5.0-1 libext2fs2_1.46.6~rc1-1.1 libfakeroot_1.30.1-1.1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-11 libgcc-12-dev_12.2.0-14 libgcc-12-dev-armhf-cross_12.2.0-14cross1 libgcc-s1_12.2.0-14 libgcc-s1-armhf-cross_12.2.0-14cross1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-14 libgomp1-armhf-cross_12.2.0-14cross1 libgpg-error0_1.46-1 libgprofng0_2.40-2 libgssapi-krb5-2_1.20.1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-14 libjansson4_2.14-2 libjsoncpp25_1.9.5-4 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libldap-2.5-0_2.5.13+dfsg-3 liblocale-gettext-perl_1.07-5 liblsan0_12.2.0-14 liblz4-1_1.9.4-1 liblzma5_5.4.1-0.0 libmagic-mgc_1:5.44-2 libmagic1_1:5.44-2 libmd0_1.0.4-2 libmount1_2.38.1-4 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libncursesw6_6.4-1 libnettle8_3.8.1-2 libnghttp2-14_1.51.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-6 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libpkgconf3_1.8.0-12 libproc2-0_2:4.0.2-3 libpsl5_0.21.0-1.2 libquadmath0_12.2.0-14 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: bppsuite Binary: bppsuite, bppsuite-examples Architecture: any all Version: 2.4.1-6 Maintainer: Debian Med Packaging Team Uploaders: Julien Dutheil , Andreas Tille , Pranav Ballaney Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/bppsuite Vcs-Git: https://salsa.debian.org/med-team/bppsuite.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, texinfo, libbpp-phyl-dev, libbpp-popgen-dev, libeigen3-dev Package-List: bppsuite deb science optional arch=any bppsuite-examples deb science optional arch=all Checksums-Sha1: 7ca13e39f3db596709d5eac1abee2f18c5147966 214404 bppsuite_2.4.1.orig.tar.gz 7a0e92d7f4507603343063c144f135f6deba97d2 68364 bppsuite_2.4.1-6.debian.tar.xz Checksums-Sha256: 0485adcc17e37439069d27e4fac144e5ae38036ba21f31e6d21f070ce4ea5199 214404 bppsuite_2.4.1.orig.tar.gz dea25d4226951831a6220666f727b9b19d518db994fdc95b234dba97b5eff2b1 68364 bppsuite_2.4.1-6.debian.tar.xz Files: d254ffd9e121b408aed36f49e62920d1 214404 bppsuite_2.4.1.orig.tar.gz 351c3fdaa455c3a163c17e8abfd45bdf 68364 bppsuite_2.4.1-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmO9qpMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGu2w/+P+AI/bnAEtvL5bOUMOScrMzMDAvxM4Wz eHNlIp/TcSzL0Rrwqulfq/QSS4i2mDJSUKkGhq/B8QjZTvsc48mweYz+RXjFaIhQ GsblkcugtvIfY/3osO7L40HWKhMnAX8u0cPjb0YyuXpIb+MsiCYxpR/4pX9EwweS AVD0Y5u+DwcQr+FZFVRgIXxjcU0iK/sP0KMVjfyyDbBk8470EA9ZXQFDmiw0rG4a YUB0xjzy/kAAYWi0oPPS9L+JSpTg182ShmIui3dYwbmE5MBQEoJpoUFxf1J7AVaH CrOHXyXirpQGlEMw8iZssO//1OLb3nrM27SAm79Yk1O8uMDbXUSxhCFuP560vEY5 lombzY2voM6wjp+Tb3h7+IB7Rqt6IK1CxBrMJ/3sFoViBGtNP/4xBhNeokQV4/eN D7j1T9ilJcwejUikNwhE2O57pa8uAi3BQxB11RQOJbiL8pG/lLXGtYN9NBIMz5t1 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CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-28e09a8d-8975-4755-a463-7d2cffad8909 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package bppsuite dpkg-buildpackage: info: source version 2.4.1-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DCMAKE_BUILD_TYPE=RelWithDebInfo cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabihf-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabihf-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabihf-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=RelWithDebInfo .. CMake Deprecation Warning at CMakeLists.txt:7 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The CXX compiler identification is GNU 12.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found /usr/bin/gzip compression program, using file extension .gz -- bpp-core 4.1.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 -- includes: /usr/include -- bpp-seq 12.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 -- includes: /usr/include -- bpp-phyl 12.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-phyl.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 -- includes: /usr/include -- bpp-popgen 8.0.0 found: -- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-popgen.a -- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 -- includes: /usr/include -- Found /usr/bin/makeinfo: 'info' and 'html' target enabled (builds info/html doc) -- Found texi2dvi: 'pdf' target enabled (builds pdf doc) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabihf make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles /<>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppml.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppml.dir/build.make bppSuite/CMakeFiles/bppml.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 2%] Building CXX object bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppml.dir/bppML.cpp.o -MF CMakeFiles/bppml.dir/bppML.cpp.o.d -o CMakeFiles/bppml.dir/bppML.cpp.o -c /<>/bppSuite/bppML.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppML.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 5%] Linking CXX executable bppml cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppml.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppml.dir/bppML.cpp.o -o bppml /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 5%] Built target bppml make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppseqgen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppseqgen.dir/build.make bppSuite/CMakeFiles/bppseqgen.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 7%] Building CXX object bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -MF CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o.d -o CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -c /<>/bppSuite/bppSeqGen.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppSeqGen.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h: In constructor ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = __gnu_cxx::__normal_iterator > >; = void; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:702:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 702 | vector(_InputIterator __first, _InputIterator __last, | ^~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:702:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void readTreesCoaSim(std::ifstream&, std::vector&, std::vector >&)’ at /<>/bppSuite/bppSeqGen.cpp:171:18: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /<>/bppSuite/bppSeqGen.cpp: In function ‘int main(int, char**)’: /<>/bppSuite/bppSeqGen.cpp:550:20: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 550 | tmpRates = vector(rates.begin() + previousPos, rates.begin() + currentPos); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/bppSuite/bppSeqGen.cpp:575:22: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 575 | tmpRates = vector(rates.begin() + previousPos + 1, rates.begin() + currentPos); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 10%] Linking CXX executable bppseqgen cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppseqgen.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppseqgen.dir/bppSeqGen.cpp.o -o bppseqgen /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 10%] Built target bppseqgen make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppdist.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppdist.dir/build.make bppSuite/CMakeFiles/bppdist.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 13%] Building CXX object bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppdist.dir/bppDist.cpp.o -MF CMakeFiles/bppdist.dir/bppDist.cpp.o.d -o CMakeFiles/bppdist.dir/bppDist.cpp.o -c /<>/bppSuite/bppDist.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /usr/include/Bpp/Numeric/Prob/DiscreteDistribution.h:43, from /<>/bppSuite/bppDist.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Linking CXX executable bppdist cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppdist.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppdist.dir/bppDist.cpp.o -o bppdist /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 15%] Built target bppdist make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpppars.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpppars.dir/build.make bppSuite/CMakeFiles/bpppars.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 18%] Building CXX object bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpppars.dir/bppPars.cpp.o -MF CMakeFiles/bpppars.dir/bppPars.cpp.o.d -o CMakeFiles/bpppars.dir/bppPars.cpp.o -c /<>/bppSuite/bppPars.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPars.cpp:51: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 21%] Linking CXX executable bpppars cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpppars.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpppars.dir/bppPars.cpp.o -o bpppars /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 21%] Built target bpppars make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppseqman.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppseqman.dir/build.make bppSuite/CMakeFiles/bppseqman.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 23%] Building CXX object bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -MF CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o.d -o CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -c /<>/bppSuite/bppSeqMan.cpp [ 26%] Linking CXX executable bppseqman cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppseqman.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppseqman.dir/bppSeqMan.cpp.o -o bppseqman /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 26%] Built target bppseqman make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppconsense.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppconsense.dir/build.make bppSuite/CMakeFiles/bppconsense.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 28%] Building CXX object bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppconsense.dir/bppConsense.cpp.o -MF CMakeFiles/bppconsense.dir/bppConsense.cpp.o.d -o CMakeFiles/bppconsense.dir/bppConsense.cpp.o -c /<>/bppSuite/bppConsense.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppConsense.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 31%] Linking CXX executable bppconsense cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppconsense.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppconsense.dir/bppConsense.cpp.o -o bppconsense /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 31%] Built target bppconsense make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppancestor.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppancestor.dir/build.make bppSuite/CMakeFiles/bppancestor.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 34%] Building CXX object bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -MF CMakeFiles/bppancestor.dir/bppAncestor.cpp.o.d -o CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -c /<>/bppSuite/bppAncestor.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppAncestor.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 36%] Linking CXX executable bppancestor cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppancestor.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppancestor.dir/bppAncestor.cpp.o -o bppancestor /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 36%] Built target bppancestor make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppmixedlikelihoods.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build.make bppSuite/CMakeFiles/bppmixedlikelihoods.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 39%] Building CXX object bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -MF CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o.d -o CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -c /<>/bppSuite/bppMixedLikelihoods.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppMixedLikelihoods.cpp:50: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, char**)’ at /<>/bppSuite/bppMixedLikelihoods.cpp:441:29: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1294:21, inlined from ‘int main(int, char**)’ at /<>/bppSuite/bppMixedLikelihoods.cpp:517:25: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 42%] Linking CXX executable bppmixedlikelihoods cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppmixedlikelihoods.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppmixedlikelihoods.dir/bppMixedLikelihoods.cpp.o -o bppmixedlikelihoods /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 42%] Built target bppmixedlikelihoods make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppreroot.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppreroot.dir/build.make bppSuite/CMakeFiles/bppreroot.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 44%] Building CXX object bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -MF CMakeFiles/bppreroot.dir/bppReRoot.cpp.o.d -o CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -c /<>/bppSuite/bppReRoot.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Numeric/VectorExceptions.h:47, from /usr/include/Bpp/Numeric/VectorTools.h:43, from /<>/bppSuite/bppReRoot.cpp:48: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 47%] Linking CXX executable bppreroot cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppreroot.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppreroot.dir/bppReRoot.cpp.o -o bppreroot /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 47%] Built target bppreroot make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpptreedraw.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpptreedraw.dir/build.make bppSuite/CMakeFiles/bpptreedraw.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 50%] Building CXX object bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -MF CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o.d -o CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -c /<>/bppSuite/bppTreeDraw.cpp [ 52%] Linking CXX executable bpptreedraw cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpptreedraw.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpptreedraw.dir/bppTreeDraw.cpp.o -o bpptreedraw /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 52%] Built target bpptreedraw make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bppalnscore.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bppalnscore.dir/build.make bppSuite/CMakeFiles/bppalnscore.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 55%] Building CXX object bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -MF CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o.d -o CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -c /<>/bppSuite/bppAlnScore.cpp [ 57%] Linking CXX executable bppalnscore cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bppalnscore.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bppalnscore.dir/bppAlnScore.cpp.o -o bppalnscore /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 57%] Built target bppalnscore make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/bppSuite /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/bppSuite /<>/obj-arm-linux-gnueabihf/bppSuite/CMakeFiles/bpppopstats.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f bppSuite/CMakeFiles/bpppopstats.dir/build.make bppSuite/CMakeFiles/bpppopstats.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 60%] Building CXX object bppSuite/CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -fPIE -MD -MT bppSuite/CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -MF CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o.d -o CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -c /<>/bppSuite/bppPopStats.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from /usr/include/Bpp/Io/FileTools.h:46, from /usr/include/Bpp/App/ApplicationTools.h:44, from /<>/bppSuite/bppPopStats.cpp:52: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector > bpp::TreeTemplate::getBranchLengths() [with N = bpp::Node]’ at /usr/include/Bpp/Phyl/TreeTemplate.h:351:69: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 63%] Linking CXX executable bpppopstats cd /<>/obj-arm-linux-gnueabihf/bppSuite && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpppopstats.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabihf-g++ -std=c++11 -Wall -Weffc++ -Wshadow -Wconversion -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bpppopstats.dir/bppPopStats.cpp.o -o bpppopstats /usr/lib/arm-linux-gnueabihf/libbpp-phyl.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 63%] Built target bpppopstats make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/doc /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/doc /<>/obj-arm-linux-gnueabihf/doc/CMakeFiles/info.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f doc/CMakeFiles/info.dir/build.make doc/CMakeFiles/info.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 65%] Generating info page cd /<>/obj-arm-linux-gnueabihf/doc && /usr/bin/makeinfo --no-split -o /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info /<>/doc/bppsuite.texi [ 68%] Compressing info page cd /<>/obj-arm-linux-gnueabihf/doc && /usr/bin/gzip -c -n -9 /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info > /<>/obj-arm-linux-gnueabihf/doc/bppsuite.info.gz make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [ 68%] Built target info make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' cd /<>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/man /<>/obj-arm-linux-gnueabihf /<>/obj-arm-linux-gnueabihf/man /<>/obj-arm-linux-gnueabihf/man/CMakeFiles/man.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' make -f man/CMakeFiles/man.dir/build.make man/CMakeFiles/man.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabihf' [ 71%] Compressing manpage bppalnscore.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppalnscore.1 > /<>/obj-arm-linux-gnueabihf/man/bppalnscore.1.gz [ 73%] Compressing manpage bppancestor.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppancestor.1 > /<>/obj-arm-linux-gnueabihf/man/bppancestor.1.gz [ 76%] Compressing manpage bppconsense.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppconsense.1 > /<>/obj-arm-linux-gnueabihf/man/bppconsense.1.gz [ 78%] Compressing manpage bppdist.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppdist.1 > /<>/obj-arm-linux-gnueabihf/man/bppdist.1.gz [ 81%] Compressing manpage bppmixedlikelihoods.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppmixedlikelihoods.1 > /<>/obj-arm-linux-gnueabihf/man/bppmixedlikelihoods.1.gz [ 84%] Compressing manpage bppml.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppml.1 > /<>/obj-arm-linux-gnueabihf/man/bppml.1.gz [ 86%] Compressing manpage bpppars.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bpppars.1 > /<>/obj-arm-linux-gnueabihf/man/bpppars.1.gz [ 89%] Compressing manpage bpppopstats.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bpppopstats.1 > /<>/obj-arm-linux-gnueabihf/man/bpppopstats.1.gz [ 92%] Compressing manpage bppreroot.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppreroot.1 > /<>/obj-arm-linux-gnueabihf/man/bppreroot.1.gz [ 94%] Compressing manpage bppseqgen.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppseqgen.1 > /<>/obj-arm-linux-gnueabihf/man/bppseqgen.1.gz [ 97%] Compressing manpage bppseqman.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bppseqman.1 > /<>/obj-arm-linux-gnueabihf/man/bppseqman.1.gz [100%] Compressing manpage bpptreedraw.1 cd /<>/obj-arm-linux-gnueabihf/man && /usr/bin/gzip -c -n -9 /<>/man/bpptreedraw.1 > /<>/obj-arm-linux-gnueabihf/man/bpptreedraw.1.gz make[3]: Leaving directory '/<>/obj-arm-linux-gnueabihf' [100%] Built target man make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a cd obj-arm-linux-gnueabihf && make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/debian/tmp/usr/bin/bppml -- Installing: /<>/debian/tmp/usr/bin/bppseqgen -- Installing: /<>/debian/tmp/usr/bin/bppdist -- Installing: /<>/debian/tmp/usr/bin/bpppars -- Installing: /<>/debian/tmp/usr/bin/bppseqman -- Installing: /<>/debian/tmp/usr/bin/bppconsense -- Installing: /<>/debian/tmp/usr/bin/bppancestor -- Installing: /<>/debian/tmp/usr/bin/bppmixedlikelihoods -- Installing: /<>/debian/tmp/usr/bin/bppreroot -- Installing: /<>/debian/tmp/usr/bin/bpptreedraw -- Installing: /<>/debian/tmp/usr/bin/bppalnscore -- Installing: /<>/debian/tmp/usr/bin/bpppopstats -- Installing: /<>/debian/tmp/usr/share/info/bppsuite.info.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppalnscore.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppancestor.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppconsense.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppdist.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppmixedlikelihoods.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppml.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpppars.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpppopstats.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppreroot.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppseqgen.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bppseqman.1.gz -- Installing: /<>/debian/tmp/usr/share/man/man1/bpptreedraw.1.gz make[1]: Leaving directory '/<>/obj-arm-linux-gnueabihf' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian -name "*.dnd" -exec chmod -x \{\} \; make[1]: Leaving directory '/<>' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppancestor contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppml contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpptreedraw contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppseqman contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppmixedlikelihoods contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpppopstats contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppreroot contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppconsense contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bpppars contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppdist contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppseqgen contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/bppsuite/usr/bin/bppalnscore contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'bppsuite' in '../bppsuite_2.4.1-6_armhf.deb'. dpkg-deb: building package 'bppsuite-dbgsym' in '../bppsuite-dbgsym_2.4.1-6_armhf.deb'. dpkg-genbuildinfo --build=any -O../bppsuite_2.4.1-6_armhf.buildinfo dpkg-genchanges --build=any -O../bppsuite_2.4.1-6_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-01-16T09:34:50Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ bppsuite_2.4.1-6_armhf.changes: ------------------------------- Format: 1.8 Date: Tue, 10 Jan 2023 18:55:38 +0100 Source: bppsuite Binary: bppsuite bppsuite-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.4.1-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: bppsuite - Bio++ program suite Changes: bppsuite (2.4.1-6) unstable; urgency=medium . * Relax autopkgtest for arm64 * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: a02948a0803dbf6d8444c24d2020d3fa58dee25d 6730080 bppsuite-dbgsym_2.4.1-6_armhf.deb 04316be88b19e4ed2e984ed0067bc925231ab0b2 6579 bppsuite_2.4.1-6_armhf.buildinfo 1ff4cd27fbb8372de27724d73055c27ee8da5a8b 322212 bppsuite_2.4.1-6_armhf.deb Checksums-Sha256: 522d44b4dc4411f7d8f419a11bd3ee5026c3e4da81c0ab7e31d94490a9b9d621 6730080 bppsuite-dbgsym_2.4.1-6_armhf.deb 25532f8110e60368e28eb7262850e701e9ff4ea7eb779ae84c44b40ef0068e56 6579 bppsuite_2.4.1-6_armhf.buildinfo e031e4eba142628e51984a387e875c1f7784dbef907f30baf06ac576710b1bd1 322212 bppsuite_2.4.1-6_armhf.deb Files: 45377d0b928cd21db981c18e3278d696 6730080 debug optional bppsuite-dbgsym_2.4.1-6_armhf.deb 7c334b72a9bd81f58baf6b3018eb07fd 6579 science optional bppsuite_2.4.1-6_armhf.buildinfo 188d0ec76fbbdf464ea701ac37ff0312 322212 science optional bppsuite_2.4.1-6_armhf.deb /<>/bppsuite_2.4.1-6_armhf.changes.new could not be renamed to /<>/bppsuite_2.4.1-6_armhf.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: bppsuite Binary: bppsuite bppsuite-dbgsym Architecture: armhf Version: 2.4.1-6 Checksums-Md5: 45377d0b928cd21db981c18e3278d696 6730080 bppsuite-dbgsym_2.4.1-6_armhf.deb 188d0ec76fbbdf464ea701ac37ff0312 322212 bppsuite_2.4.1-6_armhf.deb Checksums-Sha1: a02948a0803dbf6d8444c24d2020d3fa58dee25d 6730080 bppsuite-dbgsym_2.4.1-6_armhf.deb 1ff4cd27fbb8372de27724d73055c27ee8da5a8b 322212 bppsuite_2.4.1-6_armhf.deb Checksums-Sha256: 522d44b4dc4411f7d8f419a11bd3ee5026c3e4da81c0ab7e31d94490a9b9d621 6730080 bppsuite-dbgsym_2.4.1-6_armhf.deb e031e4eba142628e51984a387e875c1f7784dbef907f30baf06ac576710b1bd1 322212 bppsuite_2.4.1-6_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 16 Jan 2023 09:34:49 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-10), autotools-dev (= 20220109.1), base-files (= 12.3), base-passwd (= 3.6.1), bash (= 5.2.15-2), binutils (= 2.40-2), binutils-common (= 2.40-2), binutils-x86-64-linux-gnu (= 2.40-2), bsdextrautils (= 2.38.1-4), bsdutils (= 1:2.38.1-4), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), cmake (= 3.25.1-1), cmake-data (= 3.25.1-1), coreutils (= 9.1-1), cpp (= 4:12.2.0-3), cpp-11 (= 11.3.0-11), cpp-12 (= 12.2.0-14), dash (= 0.5.12-2), debconf (= 1.5.82), debhelper (= 13.11.4), debianutils (= 5.7-0.4), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-3), dpkg (= 1.21.18), dpkg-dev (= 1.21.18), dwz (= 0.15-1), file (= 1:5.44-2), findutils (= 4.9.0-4), g++ (= 4:12.2.0-3), g++-12 (= 12.2.0-14), gcc (= 4:12.2.0-3), gcc-11 (= 11.3.0-11), gcc-11-base (= 11.3.0-11), gcc-12 (= 12.2.0-14), gcc-12-base (= 12.2.0-14), gettext (= 0.21-10), gettext-base (= 0.21-10), grep (= 3.8-3), groff-base (= 1.22.4-9), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-2), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.6.2-1), libasan6 (= 11.3.0-11), libasan8 (= 12.2.0-14), libatomic1 (= 12.2.0-14), libattr1 (= 1:2.5.1-3), libaudit-common (= 1:3.0.7-1.1), libaudit1 (= 1:3.0.7-1.1+b2), libbinutils (= 2.40-2), libblkid1 (= 2.38.1-4), libbpp-core-dev (= 2.4.1-9), libbpp-core4 (= 2.4.1-9), libbpp-phyl-dev (= 2.4.1-8), libbpp-phyl12 (= 2.4.1-8), libbpp-popgen-dev (= 2.4.1-8), libbpp-popgen8 (= 2.4.1-8), libbpp-seq-dev (= 2.4.1-9), libbpp-seq12 (= 2.4.1-9), libbrotli1 (= 1.0.9-2+b5), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.36-8), libc-dev-bin (= 2.36-8), libc6 (= 2.36-8), libc6-dev (= 2.36-8), libcap-ng0 (= 0.8.3-1+b2), libcap2 (= 1:2.66-3), libcc1-0 (= 12.2.0-14), libcom-err2 (= 1.46.6~rc1-1.1), libcrypt-dev (= 1:4.4.33-2), libcrypt1 (= 1:4.4.33-2), libctf-nobfd0 (= 2.40-2), libctf0 (= 2.40-2), libcurl4 (= 7.87.0-2), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.266), libdebhelper-perl (= 13.11.4), libdpkg-perl (= 1.21.18), libeigen3-dev (= 3.4.0-4), libelf1 (= 0.188-2.1), libexpat1 (= 2.5.0-1), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.3.0-11), libgcc-12-dev (= 12.2.0-14), libgcc-s1 (= 12.2.0-14), libgcrypt20 (= 1.10.1-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgnutls30 (= 3.7.8-4), libgomp1 (= 12.2.0-14), libgpg-error0 (= 1.46-1), libgprofng0 (= 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2.9.14+dfsg-1.1+b2), libzstd1 (= 1.5.2+dfsg2-3), linux-libc-dev (= 6.1.4-1), login (= 1:4.13+dfsg1-1), m4 (= 1.4.19-2), make (= 4.3-4.1), man-db (= 2.11.2-1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.4-1), ncurses-bin (= 6.4-1), patch (= 2.7.6-7), perl (= 5.36.0-7), perl-base (= 5.36.0-7), perl-modules-5.36 (= 5.36.0-7), pkg-config (= 1.8.0-12), pkgconf (= 1.8.0-12), pkgconf-bin (= 1.8.0-12), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.2-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.17+nmu1), sysvinit-utils (= 3.06-2), tar (= 1.34+dfsg-1.1), tex-common (= 6.18), texinfo (= 6.8-6+b1), ucf (= 3.0043), usrmerge (= 35), util-linux (= 2.38.1-4), util-linux-extra (= 2.38.1-4), xz-utils (= 5.4.1-0.0), zlib1g (= 1:1.2.13.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1673373338" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ bppsuite-dbgsym_2.4.1-6_armhf.deb --------------------------------- new Debian package, version 2.0. size 6730080 bytes: control archive=1144 bytes. 826 bytes, 12 lines control 1360 bytes, 13 lines md5sums Package: bppsuite-dbgsym Source: bppsuite Version: 2.4.1-6 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 7180 Depends: bppsuite (= 2.4.1-6) Section: debug Priority: optional Description: debug symbols for bppsuite Build-Ids: 3fa4e52b5751134921e601264e9f041d72313800 50b239ce24e0e745029edf6f613be5a6e4a2e0e9 5386a742929dbd9500b67f8baea0e9fa5d3c8ebd 6560b8c521b624ce724c30ccd9179becbac798e7 7f0684c70d213bf4945550d91052512f53ca6146 82642ac69075dba348590d51d4cbaef7c3af69b3 8a4ec52a6f4a5c6d6c5f886ec4cce376ee284fd2 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439032 2023-01-10 17:55 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/bppsuite.debug drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-01-10 17:55 ./usr/share/doc/bppsuite-dbgsym -> bppsuite bppsuite_2.4.1-6_armhf.deb -------------------------- new Debian package, version 2.0. size 322212 bytes: control archive=1876 bytes. 1582 bytes, 33 lines control 1887 bytes, 30 lines md5sums Package: bppsuite Version: 2.4.1-6 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1269 Depends: libbpp-core4 (>= 2.4.1), libbpp-phyl12 (>= 2.4.1), libbpp-popgen8 (>= 2.4.1), libbpp-seq12 (>= 2.4.1), libc6 (>= 2.34), libgcc-s1 (>= 3.5), libstdc++6 (>= 11) Suggests: bppsuite-examples Section: science Priority: optional Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page Description: Bio++ program suite The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software. . The following programs are included: - BppML for maximum likelihood analysis, - BppSeqGen for sequences simulation, - BppAncestor for ancestral states reconstruction, - BppDist for distance methods, - BppPars for parsimony analysis, - BppSeqMan for file conversion and sequence manipulation, - BppConsense for building consensus tree and computing bootstrap values, - BppReRoot for tree rerooting. - BppTreeDraw for tree drawing. - BppAlnScore for comparing alignments and computing alignment scores. - BppMixedLikelihoods for computing site per site likelihoods of components of mixture models. - BppPopGen for population genetics analyses. drwxr-xr-x root/root 0 2023-01-10 17:55 ./ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/bin/ -rwxr-xr-x root/root 50836 2023-01-10 17:55 ./usr/bin/bppalnscore -rwxr-xr-x root/root 128660 2023-01-10 17:55 ./usr/bin/bppancestor -rwxr-xr-x root/root 63124 2023-01-10 17:55 ./usr/bin/bppconsense -rwxr-xr-x root/root 153236 2023-01-10 17:55 ./usr/bin/bppdist -rwxr-xr-x root/root 91796 2023-01-10 17:55 ./usr/bin/bppmixedlikelihoods -rwxr-xr-x root/root 153236 2023-01-10 17:55 ./usr/bin/bppml -rwxr-xr-x root/root 75412 2023-01-10 17:55 ./usr/bin/bpppars -rwxr-xr-x root/root 173716 2023-01-10 17:55 ./usr/bin/bpppopstats -rwxr-xr-x root/root 75412 2023-01-10 17:55 ./usr/bin/bppreroot -rwxr-xr-x root/root 140948 2023-01-10 17:55 ./usr/bin/bppseqgen -rwxr-xr-x root/root 50836 2023-01-10 17:55 ./usr/bin/bppseqman -rwxr-xr-x root/root 54932 2023-01-10 17:55 ./usr/bin/bpptreedraw drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/doc/bppsuite/ -rw-r--r-- root/root 278 2023-01-10 17:55 ./usr/share/doc/bppsuite/README.test -rw-r--r-- root/root 94 2023-01-10 17:55 ./usr/share/doc/bppsuite/README.test_data -rw-r--r-- root/root 870 2023-01-10 17:55 ./usr/share/doc/bppsuite/changelog.Debian.gz -rw-r--r-- root/root 2541 2018-08-16 09:31 ./usr/share/doc/bppsuite/changelog.gz -rw-r--r-- root/root 23164 2023-01-10 17:55 ./usr/share/doc/bppsuite/copyright drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/info/ -rw-r--r-- root/root 29945 2023-01-10 17:55 ./usr/share/info/bppsuite.info.gz drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/man/ drwxr-xr-x root/root 0 2023-01-10 17:55 ./usr/share/man/man1/ -rw-r--r-- root/root 402 2023-01-10 17:55 ./usr/share/man/man1/bppalnscore.1.gz -rw-r--r-- root/root 390 2023-01-10 17:55 ./usr/share/man/man1/bppancestor.1.gz -rw-r--r-- root/root 361 2023-01-10 17:55 ./usr/share/man/man1/bppconsense.1.gz -rw-r--r-- root/root 383 2023-01-10 17:55 ./usr/share/man/man1/bppdist.1.gz -rw-r--r-- root/root 494 2023-01-10 17:55 ./usr/share/man/man1/bppmixedlikelihoods.1.gz -rw-r--r-- root/root 370 2023-01-10 17:55 ./usr/share/man/man1/bppml.1.gz -rw-r--r-- root/root 361 2023-01-10 17:55 ./usr/share/man/man1/bpppars.1.gz -rw-r--r-- root/root 371 2023-01-10 17:55 ./usr/share/man/man1/bpppopstats.1.gz -rw-r--r-- root/root 357 2023-01-10 17:55 ./usr/share/man/man1/bppreroot.1.gz -rw-r--r-- root/root 388 2023-01-10 17:55 ./usr/share/man/man1/bppseqgen.1.gz -rw-r--r-- root/root 465 2023-01-10 17:55 ./usr/share/man/man1/bppseqman.1.gz -rw-r--r-- root/root 429 2023-01-10 17:55 ./usr/share/man/man1/bpptreedraw.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [563 B] Get:5 copy:/<>/apt_archive ./ Packages [649 B] Fetched 2175 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 14.0 MB of archives. After this operation, 51.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.7-1 [1400 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-5 [48.5 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.40.1-1 [838 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1 [948 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.12.0-1 [2888 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:29 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:30 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.80-1 [101 kB] Get:31 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:33 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.13-2 [19.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.32-1+b1 [130 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:48 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:53 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:57 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:58 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:59 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:60 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:62 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:64 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:65 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.10-1 [24.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:72 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:73 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:74 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:75 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.078-1 [217 kB] Get:76 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:77 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:79 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.67-1 [194 kB] Get:80 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:81 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:82 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:83 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:84 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-4 [42.0 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:92 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:93 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006006-3 [21.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:97 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:98 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:100 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:101 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:102 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:104 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:105 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.001+ds-1+b1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.001+ds-2 [105 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:110 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.31-1 [57.4 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.28-1 [28.6 kB] Get:112 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:114 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:117 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:118 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.15-1 [120 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.84+ds-1+b1 [34.7 kB] Get:122 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-4 [64.0 kB] Get:123 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:124 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:125 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:126 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-27 [172 kB] Get:127 http://localhost:3142/debian sid/main amd64 lintian all 2.115.3 [1417 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.0 MB in 0s (156 MB/s) Selecting previously unselected package netbase. (Reading database ... 27018 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.7-1_amd64.deb ... Unpacking openssl (3.0.7-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-5_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-5) ... Selecting previously unselected package libreadline8:amd64. 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Setting up liblz1:amd64 (1.13-4) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up plzip (1.10-4) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.13-2) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.32-1+b1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-27) ... Setting up libsqlite3-0:amd64 (3.40.1-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.84+ds-1+b1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.5-5) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libsereal-encoder-perl (5.001+ds-2) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.31-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:amd64 (0.26-2+b1) ... Setting up libsyntax-keyword-try-perl (0.28-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b2) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-3) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.7-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.001+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.17-1) ... Setting up iso-codes (4.12.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.80-1) ... Setting up gpgconf (2.2.40-1) ... Setting up libio-socket-ssl-perl (2.078-1) ... Setting up gpg (2.2.40-1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhtml-form-perl (6.10-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.15-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.3) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.36-8) ... Processing triggers for man-db (2.11.2-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 123324 Build-Time: 95 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 13 Job: bppsuite_2.4.1-6 Lintian: pass Machine Architecture: amd64 Package: bppsuite Package-Time: 118 Source-Version: 2.4.1-6 Space: 123324 Status: successful Version: 2.4.1-6 -------------------------------------------------------------------------------- Finished at 2023-01-16T09:34:50Z Build needed 00:01:58, 123324k disk space