sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | cd-hit 4.8.1-4 (armhf) Sat, 02 Apr 2022 00:07:35 +0000 | +==============================================================================+ Package: cd-hit Version: 4.8.1-4 Source Version: 4.8.1-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-88e6016d-41ab-4a03-ab39-8defe9f3ce52' with '<>' I: NOTICE: Log filtering will replace 'build/cd-hit-ttvZCz/resolver-0NtKSg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-04-01-2012.17-F-2022-04-01-0806.30.pdiff [36.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-04-01-2012.17-F-2022-04-01-0806.30.pdiff [41.1 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2022-04-01-2012.17-F-2022-04-01-0806.30.pdiff [36.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2022-04-01-2012.17-F-2022-04-01-0806.30.pdiff [41.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8802 kB] Fetched 9173 kB in 4s (2317 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2525 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg6.0 amd64 2.4.4 [1029 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 apt amd64 2.4.4 [1496 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2525 kB in 0s (78.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10602 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.4.4_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.4.4) over (2.4.3) ... Setting up libapt-pkg6.0:amd64 (2.4.4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10602 files and directories currently installed.) Preparing to unpack .../archives/apt_2.4.4_amd64.deb ... Unpacking apt (2.4.4) over (2.4.3) ... Setting up apt (2.4.4) ... Processing triggers for libc-bin (2.33-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'cd-hit' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/cd-hit.git Please use: git clone https://salsa.debian.org/med-team/cd-hit.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 956 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main cd-hit 4.8.1-4 (dsc) [2032 B] Get:2 http://debian.oregonstate.edu/debian unstable/main cd-hit 4.8.1-4 (tar) [946 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main cd-hit 4.8.1-4 (diff) [8128 B] Fetched 956 kB in 0s (9101 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/cd-hit-ttvZCz/cd-hit-4.8.1' with '<>' I: NOTICE: Log filtering will replace 'build/cd-hit-ttvZCz' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [415 B] Get:5 copy:/<>/apt_archive ./ Packages [505 B] Fetched 1877 B in 0s (74.7 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-cross-base gcc-12-base:armhf gcc-12-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.34 libpipeline1 libsigsegv2 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.34 po-debconf rpcsvc-proto sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf glibc-doc manpages-dev:armhf gnupg git bzr krb5-doc:armhf krb5-user:armhf libstdc++-11-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:armhf libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:armhf libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-cross-base gcc-12-base:armhf gcc-12-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu67 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev libnsl-dev:armhf libnsl2:armhf libperl5.34 libpipeline1 libsigsegv2 libssl1.1:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.34 po-debconf rpcsvc-proto sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 113 newly installed, 0 to remove and 0 not upgraded. Need to get 109 MB of archives. After this operation, 423 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.34 all 5.34.0-3 [2850 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.34 amd64 5.34.0-3 [4208 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.34.0-3 [297 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.4.0-5 [200 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-3 [295 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-3 [130 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-3 [67.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-6 [175 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.3-1+b1 [144 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.5-1 [37.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.10.2-1 [1411 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.14-1 [37.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-6 [510 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.38-3 [3151 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.27-1.1 [118 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.33-7 [2289 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-19 [1958 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-19 [10.2 MB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.21.7 [1611 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.21.7 [2354 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf-base amd64 11.2.0-18cross1 [208 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-arm-linux-gnueabihf amd64 11.2.0-18cross1 [8044 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:11.2.0-2 [17.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-18cross1 [203 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-12-cross-base all 12-20220222-1cross1 [202 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.33-1cross1 [1110 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 12-20220222-1cross1 [36.6 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 12-20220222-1cross1 [94.6 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 12-20220222-1cross1 [6684 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 11.2.0-18cross1 [1963 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 12-20220222-1cross1 [479 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 12-20220222-1cross1 [855 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-armhf-cross all 11.2.0-18cross1 [711 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf amd64 11.2.0-18cross1 [15.9 MB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:11.2.0-2 [1460 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.15.5-1cross1 [1541 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.33-1cross1 [1773 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-armhf-cross all 11.2.0-18cross1 [1972 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-arm-linux-gnueabihf amd64 11.2.0-18cross1 [8922 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:11.2.0-2 [1180 B] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.13+dfsg-1 [709 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.6 [193 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.7-2 [526 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.186-1 [179 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-6 [1310 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.6 [1054 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armhf gcc-12-base armhf 12-20220319-1 [206 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.49.1 [191 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 12-20220319-1 [36.6 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.33-7 [2352 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.4.0-5 [2778 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 12-20220319-1 [6948 B] Get:92 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.16.18-1 [1482 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.27-1.1 [96.0 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.27-1.1 [125 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.46.5-2 [74.8 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.19.2-2+b1 [62.9 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.19.2-2+b1 [110 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-3 [14.4 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1n-1 [1309 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.19.2-2+b1 [319 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.19.2-2+b1 [144 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc3 armhf 1.3.2-2 [72.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc-dev armhf 1.3.2-2 [182 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.33-7 [1805 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 12-20220319-1 [96.9 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 12-20220319-1 [522 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 12-20220319-1 [856 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.4.0-5 [659 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.4.0-5 [1774 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-4 [84.4 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4 [184 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 109 MB in 1s (126 MB/s) Selecting previously unselected package perl-modules-5.34. (Reading database ... 10602 files and directories currently installed.) Preparing to unpack .../000-perl-modules-5.34_5.34.0-3_all.deb ... Unpacking perl-modules-5.34 (5.34.0-3) ... Selecting previously unselected package libperl5.34:amd64. Preparing to unpack .../001-libperl5.34_5.34.0-3_amd64.deb ... Unpacking libperl5.34:amd64 (5.34.0-3) ... Selecting previously unselected package perl. Preparing to unpack .../002-perl_5.34.0-3_amd64.deb ... Unpacking perl (5.34.0-3) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../003-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package gcc-9-base:armhf. Preparing to unpack .../004-gcc-9-base_9.4.0-5_armhf.deb ... Unpacking gcc-9-base:armhf (9.4.0-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... 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Setting up gcc-12-cross-base (12-20220222-1cross1) ... Setting up bsdextrautils (2.37.3-1+b1) ... Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.41-3) ... Setting up libgcc-s1-armhf-cross (12-20220222-1cross1) ... Setting up libmagic1:amd64 (1:5.41-3) ... Setting up linux-libc-dev:armhf (5.16.18-1) ... Setting up gettext-base (0.21-6) ... Setting up file (1:5.41-3) ... Setting up libatomic1-armhf-cross (12-20220222-1cross1) ... Setting up perl-modules-5.34 (5.34.0-3) ... Setting up gcc-12-base:armhf (12-20220319-1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up libstdc++6-armhf-cross (12-20220222-1cross1) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up gcc-11-arm-linux-gnueabihf-base:amd64 (11.2.0-18cross1) ... Setting up libsigsegv2:amd64 (2.14-1) ... Setting up linux-libc-dev-armhf-cross (5.15.5-1cross1) ... Setting up autopoint (0.21-6) ... Setting up libubsan1-armhf-cross (12-20220222-1cross1) ... Setting up gcc-11-cross-base (11.2.0-18cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.27-1.1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.33-7) ... Setting up binutils-arm-linux-gnueabihf (2.38-3) ... Setting up libelf1:amd64 (0.186-1) ... Setting up libxml2:amd64 (2.9.13+dfsg-1) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up gcc-9-base:armhf (9.4.0-5) ... Setting up cpp-11-arm-linux-gnueabihf (11.2.0-18cross1) ... Setting up libgomp1-armhf-cross (12-20220222-1cross1) ... Setting up libperl5.34:amd64 (5.34.0-3) ... Setting up gettext (0.21-6) ... Setting up libtool (2.4.7-2) ... Setting up libc6-dev-armhf-cross (2.33-1cross1) ... Setting up m4 (1.4.18-5) ... Setting up perl (5.34.0-3) ... Setting up libasan6-armhf-cross (11.2.0-18cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.21.7) ... Setting up autoconf (2.71-2) ... Setting up libstdc++-11-dev:amd64 (11.2.0-19) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-19) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.6) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.10.2-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.21.7) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.49.1) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libgcc-11-dev-armhf-cross (11.2.0-18cross1) ... Setting up libstdc++-11-dev-armhf-cross (11.2.0-18cross1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-11-arm-linux-gnueabihf (11.2.0-18cross1) ... Setting up gcc-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up g++-11-arm-linux-gnueabihf (11.2.0-18cross1) ... Setting up g++-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up debhelper (13.6) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (12-20220319-1) ... Setting up libc6:armhf (2.33-7) ... Setting up libstdc++6:armhf (12-20220319-1) ... Setting up libkeyutils1:armhf (1.6.1-3) ... Setting up libssl1.1:armhf (1.1.1n-1) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-4) ... Setting up libcrypt1:armhf (1:4.4.27-1.1) ... Setting up libcom-err2:armhf (1.46.5-2) ... Setting up libgomp1:armhf (12-20220319-1) ... Setting up libkrb5support0:armhf (1.19.2-2+b1) ... Setting up libasan5:armhf (9.4.0-5) ... Setting up libatomic1:armhf (12-20220319-1) ... Setting up libk5crypto3:armhf (1.19.2-2+b1) ... Setting up libubsan1:armhf (12-20220319-1) ... Setting up libcrypt-dev:armhf (1:4.4.27-1.1) ... Setting up libkrb5-3:armhf (1.19.2-2+b1) ... Setting up libgcc-9-dev:armhf (9.4.0-5) ... Setting up libgssapi-krb5-2:armhf (1.19.2-2+b1) ... Setting up libtirpc3:armhf (1.3.2-2) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.33-7) ... Setting up libstdc++-9-dev:armhf (9.4.0-5) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-4) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.33-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.38-3 dpkg-dev_1.21.7 g++-11_11.2.0-19 gcc-11_11.2.0-19 libc6-dev_2.33-7 libstdc++-11-dev_11.2.0-19 libstdc++-11-dev-armhf-cross_11.2.0-18cross1 libstdc++-9-dev_9.4.0-5 libstdc++6_12-20220319-1 libstdc++6-armhf-cross_12-20220222-1cross1 linux-libc-dev_5.16.18-1 Package versions: adduser_3.121 apt_2.4.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-3 binutils-arm-linux-gnueabihf_2.38-3 binutils-common_2.38-3 binutils-x86-64-linux-gnu_2.38-3 bsdextrautils_2.37.3-1+b1 bsdutils_1:2.37.3-1+b1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-19 cpp-11-arm-linux-gnueabihf_11.2.0-18cross1 cpp-8_8.4.0-7 cpp-arm-linux-gnueabihf_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-armhf_12.9 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.6 debian-archive-keyring_2021.1.1 debianutils_5.7-0.1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dpkg_1.21.7 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.7 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.28-1 fdisk_2.37.3-1+b1 file_1:5.41-3 findutils_4.9.0-2 g++_4:11.2.0-2 g++-11_11.2.0-19 g++-11-arm-linux-gnueabihf_11.2.0-18cross1 g++-arm-linux-gnueabihf_4:11.2.0-2 gcc_4:11.2.0-2 gcc-11_11.2.0-19 gcc-11-arm-linux-gnueabihf_11.2.0-18cross1 gcc-11-arm-linux-gnueabihf-base_11.2.0-18cross1 gcc-11-base_11.2.0-19 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libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38-3 libctf0_2.38-3 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.7 libelf1_0.186-1 libext2fs2_1.46.5-2 libfakeroot_1.28-1 libfdisk1_2.37.3-1+b1 libffi6_3.2.1-9 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.23-1 libgcc-11-dev_11.2.0-19 libgcc-11-dev-armhf-cross_11.2.0-18cross1 libgcc-9-dev_9.4.0-5 libgcc-s1_12-20220319-1 libgcc-s1-armhf-cross_12-20220222-1cross1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4+b1 libgomp1_12-20220319-1 libgomp1-armhf-cross_12-20220222-1cross1 libgpg-error0_1.43-3 libgssapi-krb5-2_1.19.2-2+b1 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.24-2 libitm1_12-20220319-1 libk5crypto3_1.19.2-2+b1 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po-debconf_1.0.21+nmu1 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2022a-1 ucf_3.0043 util-linux_2.37.3-1+b1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-4 zlib1g-dev_1:1.2.11.dfsg-4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cd-hit Binary: cd-hit Architecture: any Version: 4.8.1-4 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille , Étienne Mollier Homepage: http://weizhongli-lab.org/cd-hit/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/cd-hit Vcs-Git: https://salsa.debian.org/med-team/cd-hit.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev Package-List: 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dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_help2man.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-88e6016d-41ab-4a03-ab39-8defe9f3ce52 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package cd-hit dpkg-buildpackage: info: source version 4.8.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f *.o cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454 make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- openmp=yes CC='$(CXX)' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc openmp=yes CC=\$\(CXX\) make[2]: Entering directory '/<>' arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-common.c++ -c cdhit-common.c++:322:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 322 | strcpy( date, __DATE__ ); | ^~~~~~~~ cdhit-common.c++:326:73: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 326 | printf( "Program: CD-HIT, V" CDHIT_VERSION WITH_OPENMP ", %s, " __TIME__ "\n", date ); | ^~~~~~~~ cdhit-common.c++: In member function ‘void SequenceDB::DoClustering(const Options&)’: cdhit-common.c++:3775:63: warning: format ‘%li’ expects argument of type ‘long int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 3775 | printf( "\nApproximated maximum memory consumption: %liM\n", mem ); | ~~^ ~~~ | | | | | size_t {aka unsigned int} | long int | %i In file included from /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/11/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/11/valarray:38, from cdhit-common.h:42, from cdhit-common.c++:28: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/11/valarray:38, from cdhit-common.h:42, from cdhit-common.c++:28: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1819 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1925 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1925 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1861:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1861 | __final_insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1861:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1866 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1871 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1861:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1861 | __final_insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1861:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1866 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1871 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteClustersgz(const char*, const char*, const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteClusters(const char*, const char*, const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteClustersgz(const char*, const char*, const char*, const char*, const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteClusters(const char*, const char*, const char*, const char*, const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteExtra1D(const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h: In member function ‘void SequenceDB::WriteExtra2D(SequenceDB&, const Options&)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1954 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1955 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1956 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_algo.h:1957:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1957 | std::__final_insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-utility.c++ -c cdhit-utility.c++:9:79: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 9 | char cd_hit_ver[] = "\t\t====== CD-HIT version " CDHIT_VERSION " (built on " __DATE__ ") ======"; | ^~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-2d arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est-2d arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-div arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.c++ -c arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-454 make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- PREFIX=debian/cd-hit/usr/lib/cd-hit make -j1 install DESTDIR=/<>/debian/cd-hit AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=debian/cd-hit/usr/lib/cd-hit make[2]: Entering directory '/<>' for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \ install -m 0755 $prog debian/cd-hit/usr/lib/cd-hit; \ done install -m 0755 *.pl debian/cd-hit/usr/lib/cd-hit; make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/cd-hit/usr/share/man/man1/ help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences' \ /<>/cd-hit > /<>/debian/cd-hit/usr/share/man/man1//cd-hit.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences, optimised for 454 data' \ /<>/cd-hit-454 > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-454.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences in db1 or db2 format' \ /<>/cd-hit-2d > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-2d.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='run CD-HIT algorithm on RNA/DNA sequences' \ /<>/cd-hit-est > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-est.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='run CD-HIT algorithm on RNA/DNA sequences in db1 or db2 format' \ /<>/cd-hit-est-2d > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-est-2d.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a big clustering job into pieces to run cd-hit-2d or cd-hit-est-2d jobs' \ /<>/cd-hit-2d-para.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-2d-para.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs' \ /<>/cd-hit-para.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-para.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a FASTA file into pieces' \ /<>/cd-hit-div.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-div.1 # psi-cd-hit.pl is throwing some errors which are fixed using sed # ... at least in versions <= 4.6.4 - now help2man does not work at all #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities' \ # /<>/psi-cd-hit.pl | \ # sed -e '/^Name "main::.*" used only once:/d' \ # > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit.1 # help2man does not work at all since version 4.6.4 #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \ # /<>/psi-cd-hit-2d.pl > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d.1 # FIXME: what is the difference between psi-cd-hit-2d.pl and psi-cd-hit-2d-g1.pl ? # help2man does not work at all since version 4.6.4 #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \ # /<>/psi-cd-hit-2d-g1.pl > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d-g1.1 # No help output from # clstr2tree.pl # clstr_merge.pl # clstr_merge_noorder.pl # clstr_reduce.pl # clstr_renumber.pl # clstr_rev.pl # clstr_sort_by.pl # clstr_sort_prot_by # make_multi_seq # psi-cd-hit-local.pl -> even throws several "used only once: possible typo" errors make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress --exclude=.pdf make[1]: Leaving directory '/<>' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est-2d contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-454 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-div contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cd-hit/usr/lib/cd-hit/cd-hit-est contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'cd-hit' in '../cd-hit_4.8.1-4_armhf.deb'. dpkg-deb: building package 'cd-hit-dbgsym' in '../cd-hit-dbgsym_4.8.1-4_armhf.deb'. dpkg-genbuildinfo --build=any -O../cd-hit_4.8.1-4_armhf.buildinfo dpkg-genchanges --build=any -O../cd-hit_4.8.1-4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-04-02T00:08:39Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cd-hit_4.8.1-4_armhf.changes: ----------------------------- Format: 1.8 Date: Fri, 20 Aug 2021 10:39:56 +0200 Source: cd-hit Binary: cd-hit cd-hit-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 4.8.1-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: cd-hit - suite of programs designed to quickly group sequences Closes: 992052 Changes: cd-hit (4.8.1-4) unstable; urgency=medium . * d/watch: fix broken link to github * d/control: add myself to uploaders * d/t/run-unit-test: disable memory limits in tests (Closes: #992052) * Standards-Version: 4.6.0 (routine-update) Checksums-Sha1: 3e6263aac0a280bd04dcbe890194b8dbf23643a0 1620164 cd-hit-dbgsym_4.8.1-4_armhf.deb 9e589236d1dffe72aec7e6fc741c6a6820552a3b 5011 cd-hit_4.8.1-4_armhf.buildinfo e92e5aebda15cab64b8783b3512e75a1f905b9e2 492500 cd-hit_4.8.1-4_armhf.deb Checksums-Sha256: 804edcacdfa252bce4cc3847be2f6fd269223b8824784fed96e3cbd2b72e0c7c 1620164 cd-hit-dbgsym_4.8.1-4_armhf.deb 42f769a3de9fa9ed55f905dd49b48556790da673c16cb4ab5fa5f6dfcf36dffa 5011 cd-hit_4.8.1-4_armhf.buildinfo 52edf5878403a6afd93ad2d0cc4b004c43afa732296d5532edc8faf2df96754b 492500 cd-hit_4.8.1-4_armhf.deb Files: a820d8dec82f0d0e0444731296346026 1620164 debug optional cd-hit-dbgsym_4.8.1-4_armhf.deb d780c79a45e2adcd43606a6d92d45a15 5011 science optional cd-hit_4.8.1-4_armhf.buildinfo e4620fb681ff3c1d86b6678ca89d54e1 492500 science optional cd-hit_4.8.1-4_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: cd-hit Binary: cd-hit cd-hit-dbgsym Architecture: armhf Version: 4.8.1-4 Checksums-Md5: a820d8dec82f0d0e0444731296346026 1620164 cd-hit-dbgsym_4.8.1-4_armhf.deb e4620fb681ff3c1d86b6678ca89d54e1 492500 cd-hit_4.8.1-4_armhf.deb Checksums-Sha1: 3e6263aac0a280bd04dcbe890194b8dbf23643a0 1620164 cd-hit-dbgsym_4.8.1-4_armhf.deb e92e5aebda15cab64b8783b3512e75a1f905b9e2 492500 cd-hit_4.8.1-4_armhf.deb Checksums-Sha256: 804edcacdfa252bce4cc3847be2f6fd269223b8824784fed96e3cbd2b72e0c7c 1620164 cd-hit-dbgsym_4.8.1-4_armhf.deb 52edf5878403a6afd93ad2d0cc4b004c43afa732296d5532edc8faf2df96754b 492500 cd-hit_4.8.1-4_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 02 Apr 2022 00:08:39 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-6), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.5.52), bash (= 5.1-6), binutils (= 2.38-3), binutils-common (= 2.38-3), binutils-x86-64-linux-gnu (= 2.38-3), bsdextrautils (= 2.37.3-1+b1), bsdutils (= 1:2.37.3-1+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-19), dash (= 0.5.11+git20210903+057cd650a4ed-8), debconf (= 1.5.79), debhelper (= 13.6), debianutils (= 5.7-0.1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.7-5), dpkg (= 1.21.7), dpkg-dev (= 1.21.7), dwz (= 0.14-1), file (= 1:5.41-3), findutils (= 4.9.0-2), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-19), gcc (= 4:11.2.0-2), gcc-11 (= 11.2.0-19), gcc-11-base (= 11.2.0-19), gcc-12-base (= 12-20220319-1), gettext (= 0.21-6), gettext-base (= 0.21-6), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.10-4), help2man (= 1.49.1), hostname (= 3.23), init-system-helpers (= 1.62), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-19), libatomic1 (= 12-20220319-1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libbinutils (= 2.38-3), libblkid1 (= 2.37.3-1+b1), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.33-7), libc-dev-bin (= 2.33-7), libc6 (= 2.33-7), libc6-dev (= 2.33-7), libcap-ng0 (= 0.7.9-2.2+b2), libcap2 (= 1:2.44-1), libcc1-0 (= 12-20220319-1), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.27-1.1), libcrypt1 (= 1:4.4.27-1.1), libctf-nobfd0 (= 2.38-3), libctf0 (= 2.38-3), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.6), libdpkg-perl (= 1.21.7), libelf1 (= 0.186-1), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.2.0-19), libgcc-s1 (= 12-20220319-1), libgcrypt20 (= 1.9.4-5), libgdbm-compat4 (= 1.23-1), libgdbm6 (= 1.23-1), libgmp10 (= 2:6.2.1+dfsg-3), libgomp1 (= 12-20220319-1), libgpg-error0 (= 1.43-3), libgssapi-krb5-2 (= 1.19.2-2+b1), libicu67 (= 67.1-7), libisl23 (= 0.24-2), libitm1 (= 12-20220319-1), libk5crypto3 (= 1.19.2-2+b1), libkeyutils1 (= 1.6.1-3), libkrb5-3 (= 1.19.2-2+b1), libkrb5support0 (= 1.19.2-2+b1), liblocale-gettext-perl (= 1.07-4+b2), liblsan0 (= 12-20220319-1), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-3), libmagic1 (= 1:5.41-3), libmount1 (= 2.37.3-1+b1), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-11), libpam-modules-bin (= 1.4.0-11), libpam-runtime (= 1.4.0-11), libpam0g (= 1.4.0-11), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libperl5.34 (= 5.34.0-3), libpipeline1 (= 1.5.5-1), libquadmath0 (= 12-20220319-1), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b2), libsigsegv2 (= 2.14-1), libsmartcols1 (= 2.37.3-1+b1), libssl1.1 (= 1.1.1n-1), libstdc++-11-dev (= 11.2.0-19), libstdc++6 (= 12-20220319-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 250.4-1), libtinfo6 (= 6.3-2), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.7-2), libtsan0 (= 11.2.0-19), libubsan1 (= 12-20220319-1), libuchardet0 (= 0.0.7-1), libudev1 (= 250.4-1), libunistring2 (= 1.0-1), libuuid1 (= 2.37.3-1+b1), libxml2 (= 2.9.13+dfsg-1), libzstd1 (= 1.4.9+dfsg-1), linux-libc-dev (= 5.16.18-1), login (= 1:4.11.1+dfsg1-2), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.10.2-1), mawk (= 1.3.4.20200120-3+b1), ncurses-base (= 6.3-2), ncurses-bin (= 6.3-2), patch (= 2.7.6-7), perl (= 5.34.0-3), perl-base (= 5.34.0-3), perl-modules-5.34 (= 5.34.0-3), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.01-1), tar (= 1.34+dfsg-1), util-linux (= 2.37.3-1+b1), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-4), zlib1g-dev (= 1:1.2.11.dfsg-4) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1629448796" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ cd-hit-dbgsym_4.8.1-4_armhf.deb ------------------------------- new Debian package, version 2.0. size 1620164 bytes: control archive=852 bytes. 572 bytes, 12 lines control 722 bytes, 7 lines md5sums Package: cd-hit-dbgsym Source: cd-hit Version: 4.8.1-4 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1808 Depends: cd-hit (= 4.8.1-4) Section: debug Priority: optional Description: debug symbols for cd-hit Build-Ids: 01a1083d307f95ccbf00e970104a580f39069318 6c475625a3a8f5c574fc4db2f9e4c7680df19701 8ecfd673b313ee6f837d7b18d3bcd43230fccde2 a8b3f285b83abe5629a57bd9d10d2d751e97b921 de26c89f32b0a5204c914cc470ff018c3da827fa ed03522d23b49b9956a61ddd25d81dd3a3e57620 drwxr-xr-x root/root 0 2021-08-20 08:39 ./ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/01/ -rw-r--r-- root/root 278524 2021-08-20 08:39 ./usr/lib/debug/.build-id/01/a1083d307f95ccbf00e970104a580f39069318.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/6c/ -rw-r--r-- root/root 281308 2021-08-20 08:39 ./usr/lib/debug/.build-id/6c/475625a3a8f5c574fc4db2f9e4c7680df19701.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/8e/ -rw-r--r-- root/root 277676 2021-08-20 08:39 ./usr/lib/debug/.build-id/8e/cfd673b313ee6f837d7b18d3bcd43230fccde2.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/a8/ -rw-r--r-- root/root 288392 2021-08-20 08:39 ./usr/lib/debug/.build-id/a8/b3f285b83abe5629a57bd9d10d2d751e97b921.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/de/ -rw-r--r-- root/root 279092 2021-08-20 08:39 ./usr/lib/debug/.build-id/de/26c89f32b0a5204c914cc470ff018c3da827fa.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/ed/ -rw-r--r-- root/root 282800 2021-08-20 08:39 ./usr/lib/debug/.build-id/ed/03522d23b49b9956a61ddd25d81dd3a3e57620.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/ -rw-r--r-- root/root 142444 2021-08-20 08:39 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/cd-hit.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit-dbgsym -> cd-hit cd-hit_4.8.1-4_armhf.deb ------------------------ new Debian package, version 2.0. size 492500 bytes: control archive=2152 bytes. 914 bytes, 17 lines control 3461 bytes, 52 lines md5sums Package: cd-hit Version: 4.8.1-4 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1104 Depends: libc6 (>= 2.7), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), perl:any Section: science Priority: optional Homepage: http://weizhongli-lab.org/cd-hit/ Description: suite of programs designed to quickly group sequences cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information. drwxr-xr-x root/root 0 2021-08-20 08:39 ./ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/bin/ lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit -> ../lib/cd-hit/cd-hit lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d -> ../lib/cd-hit/cd-hit-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d-para -> ../lib/cd-hit/cd-hit-2d-para.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-454 -> ../lib/cd-hit/cd-hit-454 lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-div -> ../lib/cd-hit/cd-hit-div.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est -> ../lib/cd-hit/cd-hit-est lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est-2d -> ../lib/cd-hit/cd-hit-est-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-para -> ../lib/cd-hit/cd-hit-para.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit -> cd-hit lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-2d -> cd-hit-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-454 -> cd-hit-454 lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est -> cd-hit-est lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est-2d -> cd-hit-est-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr2tree -> ../lib/cd-hit/clstr2tree.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge -> ../lib/cd-hit/clstr_merge.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge_noorder -> ../lib/cd-hit/clstr_merge_noorder.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_reduce -> ../lib/cd-hit/clstr_reduce.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_renumber -> ../lib/cd-hit/clstr_renumber.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_rev -> ../lib/cd-hit/clstr_rev.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_by -> ../lib/cd-hit/clstr_sort_by.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_prot_by -> ../lib/cd-hit/clstr_sort_prot_by.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/make_multi_seq -> ../lib/cd-hit/make_multi_seq.pl drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/cd-hit/ -rwxr-xr-x root/root 3152 2021-08-20 08:39 ./usr/lib/cd-hit/FET.pl -rwxr-xr-x root/root 92812 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit -rwxr-xr-x root/root 92812 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d -rwxr-xr-x root/root 12596 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d-para.pl -rwxr-xr-x root/root 92896 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-454 -rwxr-xr-x root/root 2126 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-clstr_2_blm8.pl -rwxr-xr-x root/root 92812 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div -rwxr-xr-x root/root 992 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div.pl -rwxr-xr-x root/root 92812 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est -rwxr-xr-x root/root 92812 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est-2d -rwxr-xr-x root/root 11859 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-para.pl -rwxr-xr-x root/root 952 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2tree.pl -rwxr-xr-x root/root 1209 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2txt.pl -rwxr-xr-x root/root 4503 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2xml.pl -rwxr-xr-x root/root 464 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_cut.pl -rwxr-xr-x root/root 3258 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list.pl -rwxr-xr-x root/root 1129 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list_sort.pl -rwxr-xr-x root/root 3199 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_merge.pl -rwxr-xr-x root/root 2162 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_merge_noorder.pl -rwxr-xr-x root/root 3465 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_quality_eval.pl -rwxr-xr-x root/root 2335 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_quality_eval_by_link.pl -rwxr-xr-x root/root 1000 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reduce.pl -rwxr-xr-x root/root 196 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_renumber.pl -rwxr-xr-x root/root 554 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rep.pl -rwxr-xr-x root/root 1160 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reps_faa_rev.pl -rwxr-xr-x root/root 1620 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rev.pl -rwxr-xr-x root/root 387 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select.pl -rwxr-xr-x root/root 555 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select_rep.pl -rwxr-xr-x root/root 779 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_histogram.pl -rwxr-xr-x root/root 725 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_stat.pl -rwxr-xr-x root/root 806 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sort_by.pl -rwxr-xr-x root/root 1291 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sort_prot_by.pl -rwxr-xr-x root/root 2928 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sql_tbl.pl -rwxr-xr-x root/root 1103 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sql_tbl_sort.pl -rwxr-xr-x root/root 1670 2021-08-20 08:39 ./usr/lib/cd-hit/make_multi_seq.pl -rwxr-xr-x root/root 3668 2021-08-20 08:39 ./usr/lib/cd-hit/plot_2d.pl -rwxr-xr-x root/root 2190 2021-08-20 08:39 ./usr/lib/cd-hit/plot_len1.pl drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc-base/ -rw-r--r-- root/root 753 2021-08-10 20:30 ./usr/share/doc-base/cd-hit.cd-hit drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/ -rw-r--r-- root/root 771 2021-08-10 20:30 ./usr/share/doc/cd-hit/README.Debian -rw-r--r-- root/root 421458 2019-02-28 20:13 ./usr/share/doc/cd-hit/cdhit-user-guide.pdf -rw-r--r-- root/root 2516 2021-08-20 08:39 ./usr/share/doc/cd-hit/changelog.Debian.gz -rw-r--r-- root/root 962 2019-02-28 20:13 ./usr/share/doc/cd-hit/changelog.gz -rw-r--r-- root/root 1151 2021-08-20 08:39 ./usr/share/doc/cd-hit/copyright drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/examples/ -rw-r--r-- root/root 2269 2021-08-10 20:30 ./usr/share/doc/cd-hit/examples/example.fa drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/man1/ -rw-r--r-- root/root 1145 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d-para.1.gz -rw-r--r-- root/root 269 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d.1.gz -rw-r--r-- root/root 273 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-454.1.gz -rw-r--r-- root/root 227 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-div.1.gz -rw-r--r-- root/root 288 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est-2d.1.gz -rw-r--r-- root/root 266 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est.1.gz -rw-r--r-- root/root 1109 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-para.1.gz -rw-r--r-- root/root 250 2021-08-20 08:39 ./usr/share/man/man1/cd-hit.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [545 B] Get:5 copy:/<>/apt_archive ./ Packages [634 B] Fetched 2142 B in 0s (82.5 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 7586 kB of archives. After this operation, 22.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-3+b1 [548 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.38.2-1 [829 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-3+b1 [928 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b4 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b4 [25.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b4 [45.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b8 [37.7 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.27-1+b1 [129 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2+b1 [40.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-1+b6 [104 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b3 [26.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b4 [28.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b4 [12.1 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b2 [13.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b8 [17.5 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.023+ds-1 [99.7 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.023+ds-1 [104 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.22-1 [51.2 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b3 [27.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b9 [8800 B] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b4 [75.8 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1+b1 [35.9 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.23-2 [90.0 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.114.0 [1382 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7586 kB in 0s (32.5 MB/s) Selecting previously unselected package diffstat. (Reading database ... 21245 files and directories currently installed.) Preparing to unpack .../000-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../001-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../002-gpgconf_2.2.27-3+b1_amd64.deb ... Unpacking gpgconf (2.2.27-3+b1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../003-libsqlite3-0_3.38.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.38.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../004-gpg_2.2.27-3+b1_amd64.deb ... Unpacking gpg (2.2.27-3+b1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../005-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 17216 Build-Time: 29 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 20 Job: cd-hit_4.8.1-4 Lintian: pass Machine Architecture: amd64 Package: cd-hit Package-Time: 64 Source-Version: 4.8.1-4 Space: 17216 Status: successful Version: 4.8.1-4 -------------------------------------------------------------------------------- Finished at 2022-04-02T00:08:39Z Build needed 00:01:04, 17216k disk space