sbuild (Debian sbuild) 0.81.2 (31 January 2021) on debian-ci-siliconvalley +==============================================================================+ | cd-hit 4.8.1-4 (ppc64el) Wed, 31 Aug 2022 23:56:35 +0000 | +==============================================================================+ Package: cd-hit Version: 4.8.1-4 Source Version: 4.8.1-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-2b66f69f-4550-47f6-a119-74ac07a2ffb4' with '<>' I: NOTICE: Log filtering will replace 'build/cd-hit-XFcDGy/resolver-mcJ5ZD' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [192 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-08-31-2009.20-F-2022-08-31-2009.20.pdiff [8167 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-08-31-2009.20-F-2022-08-31-2009.20.pdiff [9727 B] Get:4 http://localhost:3142/debian sid/main Sources T-2022-08-31-2009.20-F-2022-08-31-2009.20.pdiff [8167 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-08-31-2009.20-F-2022-08-31-2009.20.pdiff [9727 B] Get:6 http://localhost:3142/debian sid/main ppc64el Packages [9144 kB] Fetched 9481 kB in 2s (4283 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'cd-hit' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/cd-hit.git Please use: git clone https://salsa.debian.org/med-team/cd-hit.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 956 kB of source archives. Get:1 http://localhost:3142/debian sid/main cd-hit 4.8.1-4 (dsc) [2032 B] Get:2 http://localhost:3142/debian sid/main cd-hit 4.8.1-4 (tar) [946 kB] Get:3 http://localhost:3142/debian sid/main cd-hit 4.8.1-4 (diff) [8128 B] Fetched 956 kB in 4s (216 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/cd-hit-XFcDGy/cd-hit-4.8.1' with '<>' I: NOTICE: Log filtering will replace 'build/cd-hit-XFcDGy' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [418 B] Get:5 copy:/<>/apt_archive ./ Packages [506 B] Fetched 1881 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-12-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dmsetup dpkg-cross dwz file g++-12-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-12-base:ppc64el gcc-12-cross-base gcc-12-powerpc64le-linux-gnu gcc-12-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libapparmor1 libarchive-zip-perl libargon2-1 libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcryptsetup12 libdebhelper-perl libdebian-dpkgcross-perl libdevmapper1.02.1 libelf1 libfdisk1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-12-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libicu71 libio-string-perl libip4tc2 libitm1:ppc64el libitm1-ppc64el-cross libjson-c5 libk5crypto3:ppc64el libkeyutils1:ppc64el libkmod2 libkrb5-3:ppc64el libkrb5support0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libnsl-dev:ppc64el libnsl2:ppc64el libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-12-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libsystemd-shared libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sensible-utils systemd ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el krb5-doc:ppc64el krb5-user:ppc64el libstdc++-11-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved libfido2-1 libtss2-esys-3.0.2-0 libtss2-mu0 libtss2-rc0 policykit-1 Recommended packages: curl | wget | lynx libidn2-0:ppc64el libarchive-cpio-perl krb5-locales:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl default-dbus-system-bus | dbus-system-bus systemd-timesyncd | time-daemon The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-12-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dmsetup dpkg-cross dwz file g++-12-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-12-base:ppc64el gcc-12-cross-base gcc-12-powerpc64le-linux-gnu gcc-12-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libapparmor1 libarchive-zip-perl libargon2-1 libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcryptsetup12 libdebhelper-perl libdebian-dpkgcross-perl libdevmapper1.02.1 libelf1 libfdisk1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-12-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libicu71 libio-string-perl libip4tc2 libitm1:ppc64el libitm1-ppc64el-cross libjson-c5 libk5crypto3:ppc64el libkeyutils1:ppc64el libkmod2 libkrb5-3:ppc64el libkrb5support0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libnsl-dev:ppc64el libnsl2:ppc64el libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-12-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libsystemd-shared libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils systemd ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 116 newly installed, 0 to remove and 0 not upgraded. Need to get 101 MB of archives. After this operation, 408 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://localhost:3142/debian sid/main amd64 libargon2-1 amd64 0~20171227-0.3 [20.0 kB] Get:3 http://localhost:3142/debian sid/main amd64 dmsetup amd64 2:1.02.185-1 [92.7 kB] Get:4 http://localhost:3142/debian sid/main amd64 libdevmapper1.02.1 amd64 2:1.02.185-1 [143 kB] Get:5 http://localhost:3142/debian sid/main amd64 libjson-c5 amd64 0.16-1 [44.0 kB] Get:6 http://localhost:3142/debian sid/main amd64 libcryptsetup12 amd64 2:2.5.0-2 [256 kB] Get:7 http://localhost:3142/debian sid/main amd64 libfdisk1 amd64 2.38.1-1 [250 kB] Get:8 http://localhost:3142/debian sid/main amd64 libkmod2 amd64 30+20220630-3 [59.6 kB] Get:9 http://localhost:3142/debian sid/main amd64 libapparmor1 amd64 3.0.7-1 [103 kB] Get:10 http://localhost:3142/debian sid/main amd64 libip4tc2 amd64 1.8.8-1 [34.9 kB] Get:11 http://localhost:3142/debian sid/main amd64 libsystemd-shared amd64 251.4-3 [1698 kB] Get:12 http://localhost:3142/debian sid/main amd64 systemd amd64 251.4-3 [2901 kB] Get:13 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:15 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:16 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:17 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:18 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-9 [175 kB] Get:19 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:20 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:21 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-1 [145 kB] Get:22 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.6-2 [39.4 kB] Get:23 http://localhost:3142/debian sid/main amd64 man-db amd64 2.10.2-2 [1413 kB] Get:24 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:25 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:26 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:27 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:28 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:29 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-9 [510 kB] Get:30 http://localhost:3142/debian sid/main amd64 binutils-powerpc64le-linux-gnu amd64 2.38.90.20220713-2 [2714 kB] Get:31 http://localhost:3142/debian sid/main amd64 gcc-12-powerpc64le-linux-gnu-base amd64 12.2.0-1cross1 [208 kB] Get:32 http://localhost:3142/debian sid/main amd64 cpp-12-powerpc64le-linux-gnu amd64 12.2.0-1cross1 [8566 kB] Get:33 http://localhost:3142/debian sid/main amd64 cpp-powerpc64le-linux-gnu amd64 4:12.2.0-1 [17.2 kB] Get:34 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-1cross1 [203 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-ppc64el-cross all 2.34-3cross1 [1565 kB] Get:37 http://localhost:3142/debian sid/main amd64 libgcc-s1-ppc64el-cross all 12.2.0-1cross1 [31.4 kB] Get:38 http://localhost:3142/debian sid/main amd64 libgomp1-ppc64el-cross all 12.2.0-1cross1 [120 kB] Get:39 http://localhost:3142/debian sid/main amd64 libitm1-ppc64el-cross all 12.2.0-1cross1 [28.4 kB] Get:40 http://localhost:3142/debian sid/main amd64 libatomic1-ppc64el-cross all 12.2.0-1cross1 [9512 B] Get:41 http://localhost:3142/debian sid/main amd64 libasan8-ppc64el-cross all 12.2.0-1cross1 [2181 kB] Get:42 http://localhost:3142/debian sid/main amd64 liblsan0-ppc64el-cross all 12.2.0-1cross1 [980 kB] Get:43 http://localhost:3142/debian sid/main amd64 libtsan2-ppc64el-cross all 12.2.0-1cross1 [2263 kB] Get:44 http://localhost:3142/debian sid/main amd64 libstdc++6-ppc64el-cross all 12.2.0-1cross1 [660 kB] Get:45 http://localhost:3142/debian sid/main amd64 libubsan1-ppc64el-cross all 12.2.0-1cross1 [897 kB] Get:46 http://localhost:3142/debian sid/main amd64 libquadmath0-ppc64el-cross all 12.2.0-1cross1 [149 kB] Get:47 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-ppc64el-cross all 12.2.0-1cross1 [1316 kB] Get:48 http://localhost:3142/debian sid/main amd64 gcc-12-powerpc64le-linux-gnu amd64 12.2.0-1cross1 [16.9 MB] Get:49 http://localhost:3142/debian sid/main amd64 gcc-powerpc64le-linux-gnu amd64 4:12.2.0-1 [1472 B] Get:50 http://localhost:3142/debian sid/main amd64 linux-libc-dev-ppc64el-cross all 5.18.16-1cross1 [1732 kB] Get:51 http://localhost:3142/debian sid/main amd64 libc6-dev-ppc64el-cross all 2.34-3cross1 [1979 kB] Get:52 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-ppc64el-cross all 12.2.0-1cross1 [2123 kB] Get:53 http://localhost:3142/debian sid/main amd64 g++-12-powerpc64le-linux-gnu amd64 12.2.0-1cross1 [9488 kB] Get:54 http://localhost:3142/debian sid/main amd64 g++-powerpc64le-linux-gnu amd64 4:12.2.0-1 [1184 B] Get:55 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:57 http://localhost:3142/debian sid/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:58 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:59 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-2 [21.0 kB] Get:61 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:63 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:64 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:65 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-1 [17.3 kB] Get:67 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:68 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:69 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:70 http://localhost:3142/debian sid/main amd64 crossbuild-essential-ppc64el all 12.9 [6716 B] Get:71 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.9.1 [196 kB] Get:72 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-4 [526 kB] Get:73 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:74 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:75 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-3 [10.4 kB] Get:76 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:77 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:78 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.187-1 [179 kB] Get:79 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:80 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-9 [1315 kB] Get:81 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:82 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:83 http://localhost:3142/debian sid/main amd64 debhelper all 13.9.1 [1071 kB] Get:84 http://localhost:3142/debian sid/main ppc64el gcc-11-base ppc64el 11.3.0-5 [209 kB] Get:85 http://localhost:3142/debian sid/main ppc64el gcc-12-base ppc64el 12.2.0-1 [208 kB] Get:86 http://localhost:3142/debian sid/main amd64 help2man amd64 1.49.2 [202 kB] Get:87 http://localhost:3142/debian sid/main ppc64el libgcc-s1 ppc64el 12.2.0-1 [31.4 kB] Get:88 http://localhost:3142/debian sid/main ppc64el libc6 ppc64el 2.34-7 [2878 kB] Get:89 http://localhost:3142/debian sid/main ppc64el libasan6 ppc64el 11.3.0-5 [2038 kB] Get:90 http://localhost:3142/debian sid/main ppc64el libatomic1 ppc64el 12.2.0-1 [9768 B] Get:91 http://localhost:3142/debian sid/main ppc64el linux-libc-dev ppc64el 5.18.16-1 [1609 kB] Get:92 http://localhost:3142/debian sid/main ppc64el libcrypt1 ppc64el 1:4.4.28-2 [97.6 kB] Get:93 http://localhost:3142/debian sid/main ppc64el libcrypt-dev ppc64el 1:4.4.28-2 [131 kB] Get:94 http://localhost:3142/debian sid/main ppc64el libcom-err2 ppc64el 1.46.5-2 [76.2 kB] Get:95 http://localhost:3142/debian sid/main ppc64el libkrb5support0 ppc64el 1.20-1 [69.6 kB] Get:96 http://localhost:3142/debian sid/main ppc64el libk5crypto3 ppc64el 1.20-1 [123 kB] Get:97 http://localhost:3142/debian sid/main ppc64el libkeyutils1 ppc64el 1.6.3-1 [16.9 kB] Get:98 http://localhost:3142/debian sid/main ppc64el libssl3 ppc64el 3.0.5-2 [2043 kB] Get:99 http://localhost:3142/debian sid/main ppc64el libkrb5-3 ppc64el 1.20-1 [398 kB] Get:100 http://localhost:3142/debian sid/main ppc64el libgssapi-krb5-2 ppc64el 1.20-1 [182 kB] Get:101 http://localhost:3142/debian sid/main ppc64el libtirpc3 ppc64el 1.3.3+ds-1 [96.7 kB] Get:102 http://localhost:3142/debian sid/main ppc64el libnsl2 ppc64el 1.3.0-2 [44.8 kB] Get:103 http://localhost:3142/debian sid/main ppc64el libtirpc-dev ppc64el 1.3.3+ds-1 [209 kB] Get:104 http://localhost:3142/debian sid/main ppc64el libnsl-dev ppc64el 1.3.0-2 [73.6 kB] Get:105 http://localhost:3142/debian sid/main ppc64el libc6-dev ppc64el 2.34-7 [1989 kB] Get:106 http://localhost:3142/debian sid/main ppc64el libgomp1 ppc64el 12.2.0-1 [123 kB] Get:107 http://localhost:3142/debian sid/main ppc64el libitm1 ppc64el 12.2.0-1 [28.9 kB] Get:108 http://localhost:3142/debian sid/main ppc64el liblsan0 ppc64el 12.2.0-1 [980 kB] Get:109 http://localhost:3142/debian sid/main ppc64el libtsan0 ppc64el 11.3.0-5 [2021 kB] Get:110 http://localhost:3142/debian sid/main ppc64el libstdc++6 ppc64el 12.2.0-1 [705 kB] Get:111 http://localhost:3142/debian sid/main ppc64el libubsan1 ppc64el 12.2.0-1 [897 kB] Get:112 http://localhost:3142/debian sid/main ppc64el libquadmath0 ppc64el 12.2.0-1 [149 kB] Get:113 http://localhost:3142/debian sid/main ppc64el libgcc-11-dev ppc64el 11.3.0-5 [1273 kB] Get:114 http://localhost:3142/debian sid/main ppc64el libstdc++-11-dev ppc64el 11.3.0-5 [2058 kB] Get:115 http://localhost:3142/debian sid/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-4.1 [96.0 kB] Get:116 http://localhost:3142/debian sid/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-4.1 [197 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 101 MB in 1s (185 MB/s) Selecting previously unselected package libargon2-1:amd64. 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Selecting previously unselected package liblsan0:ppc64el. Preparing to unpack .../106-liblsan0_12.2.0-1_ppc64el.deb ... Unpacking liblsan0:ppc64el (12.2.0-1) ... Selecting previously unselected package libtsan0:ppc64el. Preparing to unpack .../107-libtsan0_11.3.0-5_ppc64el.deb ... Unpacking libtsan0:ppc64el (11.3.0-5) ... Selecting previously unselected package libstdc++6:ppc64el. Preparing to unpack .../108-libstdc++6_12.2.0-1_ppc64el.deb ... Unpacking libstdc++6:ppc64el (12.2.0-1) ... Selecting previously unselected package libubsan1:ppc64el. Preparing to unpack .../109-libubsan1_12.2.0-1_ppc64el.deb ... Unpacking libubsan1:ppc64el (12.2.0-1) ... Selecting previously unselected package libquadmath0:ppc64el. Preparing to unpack .../110-libquadmath0_12.2.0-1_ppc64el.deb ... Unpacking libquadmath0:ppc64el (12.2.0-1) ... Selecting previously unselected package libgcc-11-dev:ppc64el. Preparing to unpack .../111-libgcc-11-dev_11.3.0-5_ppc64el.deb ... 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Setting up libicu71:amd64 (71.1-3) ... Setting up gcc-11-base:ppc64el (11.3.0-5) ... Setting up libfile-which-perl (1.27-1) ... Setting up libapparmor1:amd64 (3.0.7-1) ... Setting up gcc-12-cross-base (12.2.0-1cross1) ... Setting up bsdextrautils (2.38.1-1) ... Setting up gcc-12-powerpc64le-linux-gnu-base:amd64 (12.2.0-1cross1) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libargon2-1:amd64 (0~20171227-0.3) ... Setting up libc6-ppc64el-cross (2.34-3cross1) ... Setting up libdebhelper-perl (13.9.1) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:ppc64el (5.18.16-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-9) ... Setting up m4 (1.4.19-1) ... Setting up file (1:5.41-4) ... Setting up libgomp1-ppc64el-cross (12.2.0-1cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up gcc-12-base:ppc64el (12.2.0-1) ... Setting up libxml-sax-base-perl (1.09-2) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up cpp-12-powerpc64le-linux-gnu (12.2.0-1cross1) ... Setting up autopoint (0.21-9) ... Setting up autoconf (2.71-2) ... Setting up libitm1-ppc64el-cross (12.2.0-1cross1) ... Setting up libfdisk1:amd64 (2.38.1-1) ... Setting up libatomic1-ppc64el-cross (12.2.0-1cross1) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (5.18.16-1cross1) ... Setting up libsub-override-perl (0.09-3) ... Setting up libgcc-s1-ppc64el-cross (12.2.0-1cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.38.90.20220713-2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libelf1:amd64 (0.187-1) ... Setting up libjson-c5:amd64 (0.16-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1+b1) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up cpp-powerpc64le-linux-gnu (4:12.2.0-1) ... Setting up libkmod2:amd64 (30+20220630-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up gettext (0.21-9) ... Setting up libc6-dev-ppc64el-cross (2.34-3cross1) ... Setting up libtool (2.4.7-4) ... Setting up libquadmath0-ppc64el-cross (12.2.0-1cross1) ... Setting up libasan8-ppc64el-cross (12.2.0-1cross1) ... Setting up liblsan0-ppc64el-cross (12.2.0-1cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libtsan2-ppc64el-cross (12.2.0-1cross1) ... Setting up help2man (1.49.2) ... Setting up dh-autoreconf (20) ... Setting up libsystemd-shared:amd64 (251.4-3) ... Setting up ucf (3.0043) ... Setting up libstdc++6-ppc64el-cross (12.2.0-1cross1) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libubsan1-ppc64el-cross (12.2.0-1cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libgcc-12-dev-ppc64el-cross (12.2.0-1cross1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-12-powerpc64le-linux-gnu (12.2.0-1cross1) ... Setting up libstdc++-12-dev-ppc64el-cross (12.2.0-1cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:12.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-12-powerpc64le-linux-gnu (12.2.0-1cross1) ... Setting up g++-powerpc64le-linux-gnu (4:12.2.0-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-ppc64el (12.9) ... Setting up libgcc-s1:ppc64el (12.2.0-1) ... Setting up libc6:ppc64el (2.34-7) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.185-1) ... Setting up dmsetup (2:1.02.185-1) ... Setting up libcryptsetup12:amd64 (2:2.5.0-2) ... Setting up libstdc++6:ppc64el (12.2.0-1) ... Setting up liblsan0:ppc64el (12.2.0-1) ... Setting up libitm1:ppc64el (12.2.0-1) ... Setting up libtsan0:ppc64el (11.3.0-5) ... Setting up libkeyutils1:ppc64el (1.6.3-1) ... Setting up libssl3:ppc64el (3.0.5-2) ... Setting up zlib1g:ppc64el (1:1.2.11.dfsg-4.1) ... Setting up libcrypt1:ppc64el (1:4.4.28-2) ... Setting up systemd (251.4-3) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service → /lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target → /lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /lib/systemd/system/systemd-pstore.service. Initializing machine ID from random generator. Setting up libcom-err2:ppc64el (1.46.5-2) ... Setting up libgomp1:ppc64el (12.2.0-1) ... Setting up man-db (2.10.2-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libasan6:ppc64el (11.3.0-5) ... Setting up libkrb5support0:ppc64el (1.20-1) ... Setting up libquadmath0:ppc64el (12.2.0-1) ... Setting up libatomic1:ppc64el (12.2.0-1) ... Setting up libk5crypto3:ppc64el (1.20-1) ... Setting up libubsan1:ppc64el (12.2.0-1) ... Setting up libgcc-11-dev:ppc64el (11.3.0-5) ... Setting up libcrypt-dev:ppc64el (1:4.4.28-2) ... Setting up libkrb5-3:ppc64el (1.20-1) ... Setting up debhelper (13.9.1) ... Setting up libgssapi-krb5-2:ppc64el (1.20-1) ... Setting up libtirpc3:ppc64el (1.3.3+ds-1) ... Setting up libtirpc-dev:ppc64el (1.3.3+ds-1) ... Setting up libnsl2:ppc64el (1.3.0-2) ... Setting up libnsl-dev:ppc64el (1.3.0-2) ... Setting up libc6-dev:ppc64el (2.34-7) ... Setting up libstdc++-11-dev:ppc64el (11.3.0-5) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-4.1) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-15-amd64 #1 SMP Debian 5.10.120-1 (2022-06-09) amd64 (x86_64) Toolchain package versions: binutils_2.38.90.20220713-2 dpkg-dev_1.21.9 g++-11_11.3.0-5 g++-12_12.2.0-1 gcc-11_11.3.0-5 gcc-12_12.2.0-1 libc6-dev_2.34-7 libstdc++-11-dev_11.3.0-5 libstdc++-12-dev_12.2.0-1 libstdc++-12-dev-ppc64el-cross_12.2.0-1cross1 libstdc++6_12.2.0-1 libstdc++6-ppc64el-cross_12.2.0-1cross1 linux-libc-dev_5.18.16-1 Package versions: adduser_3.128 apt_2.5.2 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.6.0 bash_5.2~rc2-2 binutils_2.38.90.20220713-2 binutils-common_2.38.90.20220713-2 binutils-powerpc64le-linux-gnu_2.38.90.20220713-2 binutils-x86-64-linux-gnu_2.38.90.20220713-2 bsdextrautils_2.38.1-1 bsdutils_1:2.38.1-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:12.2.0-1 cpp-11_11.3.0-5 cpp-12_12.2.0-1 cpp-12-powerpc64le-linux-gnu_12.2.0-1cross1 cpp-powerpc64le-linux-gnu_4:12.2.0-1 cross-config_2.6.18+nmu2 crossbuild-essential-ppc64el_12.9 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.9.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dmsetup_2:1.02.185-1 dpkg_1.21.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.9 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1 g++-11_11.3.0-5 g++-12_12.2.0-1 g++-12-powerpc64le-linux-gnu_12.2.0-1cross1 g++-powerpc64le-linux-gnu_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-5 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libcom-err2_1.46.5-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libcryptsetup12_2:2.5.0-2 libctf-nobfd0_2.38.90.20220713-2 libctf0_2.38.90.20220713-2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.9.1 libdebian-dpkgcross-perl_2.6.18+nmu2 libdevmapper1.02.1_2:1.02.185-1 libdpkg-perl_1.21.9 libelf1_0.187-1 libext2fs2_1.46.5-2 libfakeroot_1.29-1 libfdisk1_2.38.1-1 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.27-1 libgcc-11-dev_11.3.0-5 libgcc-12-dev_12.2.0-1 libgcc-12-dev-ppc64el-cross_12.2.0-1cross1 libgcc-s1_12.2.0-1 libgcc-s1-ppc64el-cross_12.2.0-1cross1 libgcrypt20_1.10.1-2 libgdbm-compat4_1.23-1+b1 libgdbm6_1.23-1+b1 libgmp10_2:6.2.1+dfsg1-1 libgnutls30_3.7.7-2 libgomp1_12.2.0-1 libgomp1-ppc64el-cross_12.2.0-1cross1 libgpg-error0_1.45-2 libgprofng0_2.38.90.20220713-2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu71_71.1-3 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ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-5 perl-base_5.34.0-5 perl-modules-5.34_5.34.0-5 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 systemd_251.4-3 sysvinit-utils_3.04-1 tar_1.34+dfsg-1 tzdata_2022c-1 ucf_3.0043 util-linux_2.38.1-1 util-linux-extra_2.38.1-1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cd-hit Binary: cd-hit Architecture: any Version: 4.8.1-4 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille , Étienne Mollier Homepage: http://weizhongli-lab.org/cd-hit/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/cd-hit Vcs-Git: https://salsa.debian.org/med-team/cd-hit.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev Package-List: cd-hit deb science optional arch=any Checksums-Sha1: 12c401562cd506296ccafa301e1fd8a29b210470 945639 cd-hit_4.8.1.orig.tar.gz 0c7096447908bdbb0cb5795b02171c585d3618f0 8128 cd-hit_4.8.1-4.debian.tar.xz Checksums-Sha256: f8bc3cdd7aebb432fcd35eed0093e7a6413f1e36bbd2a837ebc06e57cdb20b70 945639 cd-hit_4.8.1.orig.tar.gz 827e471b3724e5680aebf69c155d825aa812be549bf0536defc29668f3abbbe1 8128 cd-hit_4.8.1-4.debian.tar.xz Files: b997bcc5a07703ca9bd3f84818114c37 945639 cd-hit_4.8.1.orig.tar.gz 40beb397b78cc269ea9dc48f9fa22c88 8128 cd-hit_4.8.1-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmEfbYsUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqkXBAAwMJobCyKBNsZS2dmYUeOST550IJT CeDXSEggmWF9Mw5Rkmazj7TWBRkk0YlhVPhCcJqHiVOnF2ZqP/39oRq7Gr9ZxRvd 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signature ./cd-hit_4.8.1-4.dsc dpkg-source: info: extracting cd-hit in /<> dpkg-source: info: unpacking cd-hit_4.8.1.orig.tar.gz dpkg-source: info: unpacking cd-hit_4.8.1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_help2man.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-2b66f69f-4550-47f6-a119-74ac07a2ffb4 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package cd-hit dpkg-buildpackage: info: source version 4.8.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f *.o cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454 make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- openmp=yes CC='$(CXX)' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=powerpc64le-linux-gnu-pkg-config CXX=powerpc64le-linux-gnu-g\+\+ CC=powerpc64le-linux-gnu-gcc openmp=yes CC=\$\(CXX\) make[2]: Entering directory '/<>' powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-common.c++ -c cdhit-common.c++:322:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 322 | strcpy( date, __DATE__ ); | ^~~~~~~~ cdhit-common.c++:326:73: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 326 | printf( "Program: CD-HIT, V" CDHIT_VERSION WITH_OPENMP ", %s, " __TIME__ "\n", date ); | ^~~~~~~~ powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-utility.c++ -c cdhit-utility.c++:9:79: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 9 | char cd_hit_ver[] = "\t\t====== CD-HIT version " CDHIT_VERSION " (built on " __DATE__ ") ======"; | ^~~~~~~~ powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-2d powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-est-2d.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-est-2d powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-div.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-div powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.c++ -c powerpc64le-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DWITH_ZLIB -O2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security cdhit-454.o cdhit-common.o cdhit-utility.o -Wl,-z,relro -Wl,-z,now -lz -o cd-hit-454 make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- PREFIX=debian/cd-hit/usr/lib/cd-hit make -j1 install DESTDIR=/<>/debian/cd-hit AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=debian/cd-hit/usr/lib/cd-hit make[2]: Entering directory '/<>' for prog in cd-hit cd-hit-est cd-hit-2d cd-hit-est-2d cd-hit-div cd-hit-454; do \ install -m 0755 $prog debian/cd-hit/usr/lib/cd-hit; \ done install -m 0755 *.pl debian/cd-hit/usr/lib/cd-hit; make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/cd-hit/usr/share/man/man1/ help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences' \ /<>/cd-hit > /<>/debian/cd-hit/usr/share/man/man1//cd-hit.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences, optimised for 454 data' \ /<>/cd-hit-454 > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-454.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='quickly group sequences in db1 or db2 format' \ /<>/cd-hit-2d > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-2d.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='run CD-HIT algorithm on RNA/DNA sequences' \ /<>/cd-hit-est > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-est.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='run CD-HIT algorithm on RNA/DNA sequences in db1 or db2 format' \ /<>/cd-hit-est-2d > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-est-2d.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a big clustering job into pieces to run cd-hit-2d or cd-hit-est-2d jobs' \ /<>/cd-hit-2d-para.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-2d-para.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs' \ /<>/cd-hit-para.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-para.1 help2man --no-info --no-discard-stderr --version-string='4.8.1' \ --name='divide a FASTA file into pieces' \ /<>/cd-hit-div.pl > /<>/debian/cd-hit/usr/share/man/man1//cd-hit-div.1 # psi-cd-hit.pl is throwing some errors which are fixed using sed # ... at least in versions <= 4.6.4 - now help2man does not work at all #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities' \ # /<>/psi-cd-hit.pl | \ # sed -e '/^Name "main::.*" used only once:/d' \ # > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit.1 # help2man does not work at all since version 4.6.4 #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \ # /<>/psi-cd-hit-2d.pl > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d.1 # FIXME: what is the difference between psi-cd-hit-2d.pl and psi-cd-hit-2d-g1.pl ? # help2man does not work at all since version 4.6.4 #help2man --no-info --no-discard-stderr --version-string='4.8.1' \ # --name='runs similar algorithm like CD-HIT but using BLAST to calculate similarities in db1 or db2 format' \ # /<>/psi-cd-hit-2d-g1.pl > /<>/debian/cd-hit/usr/share/man/man1//psi-cd-hit-2d-g1.1 # No help output from # clstr2tree.pl # clstr_merge.pl # clstr_merge_noorder.pl # clstr_reduce.pl # clstr_renumber.pl # clstr_rev.pl # clstr_sort_by.pl # clstr_sort_prot_by # make_multi_seq # psi-cd-hit-local.pl -> even throws several "used only once: possible typo" errors make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress --exclude=.pdf make[1]: Leaving directory '/<>' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'cd-hit' in '../cd-hit_4.8.1-4_ppc64el.deb'. dpkg-deb: building package 'cd-hit-dbgsym' in '../cd-hit-dbgsym_4.8.1-4_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../cd-hit_4.8.1-4_ppc64el.buildinfo dpkg-genchanges --build=any -O../cd-hit_4.8.1-4_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-08-31T23:57:19Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cd-hit_4.8.1-4_ppc64el.changes: ------------------------------- Format: 1.8 Date: Fri, 20 Aug 2021 10:39:56 +0200 Source: cd-hit Binary: cd-hit cd-hit-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 4.8.1-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: cd-hit - suite of programs designed to quickly group sequences Closes: 992052 Changes: cd-hit (4.8.1-4) unstable; urgency=medium . * d/watch: fix broken link to github * d/control: add myself to uploaders * d/t/run-unit-test: disable memory limits in tests (Closes: #992052) * Standards-Version: 4.6.0 (routine-update) Checksums-Sha1: a12c376e7669e5dd6fa58b2b50449f990ee1e2e7 1649972 cd-hit-dbgsym_4.8.1-4_ppc64el.deb cda463da84df36f0de7c58671a9bc2f61a0e769c 5569 cd-hit_4.8.1-4_ppc64el.buildinfo 78c9349cfc197e178efcae2922c13386b6cc95ba 513708 cd-hit_4.8.1-4_ppc64el.deb Checksums-Sha256: 90f0c16146eef1f1d014019c331594c3e2955734f8f8bf13d1edfbad359b5a49 1649972 cd-hit-dbgsym_4.8.1-4_ppc64el.deb c04d683ad07b00bef23c2a56aba755ce568773476dcd194aaefcedf1c8a71970 5569 cd-hit_4.8.1-4_ppc64el.buildinfo c739512bc90a31e7eb7de66e637b46a58786e285efb519d03d8b5c85308e0f98 513708 cd-hit_4.8.1-4_ppc64el.deb Files: a96d54f1969d39ced5bb99d3f62a4474 1649972 debug optional cd-hit-dbgsym_4.8.1-4_ppc64el.deb 3c92424328b461e0c144d9292a81d694 5569 science optional cd-hit_4.8.1-4_ppc64el.buildinfo 6a910b234ede34a42d9549830a7d1103 513708 science optional cd-hit_4.8.1-4_ppc64el.deb /<>/cd-hit_4.8.1-4_ppc64el.changes.new could not be renamed to /<>/cd-hit_4.8.1-4_ppc64el.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: cd-hit Binary: cd-hit cd-hit-dbgsym Architecture: ppc64el Version: 4.8.1-4 Checksums-Md5: a96d54f1969d39ced5bb99d3f62a4474 1649972 cd-hit-dbgsym_4.8.1-4_ppc64el.deb 6a910b234ede34a42d9549830a7d1103 513708 cd-hit_4.8.1-4_ppc64el.deb Checksums-Sha1: a12c376e7669e5dd6fa58b2b50449f990ee1e2e7 1649972 cd-hit-dbgsym_4.8.1-4_ppc64el.deb 78c9349cfc197e178efcae2922c13386b6cc95ba 513708 cd-hit_4.8.1-4_ppc64el.deb Checksums-Sha256: 90f0c16146eef1f1d014019c331594c3e2955734f8f8bf13d1edfbad359b5a49 1649972 cd-hit-dbgsym_4.8.1-4_ppc64el.deb c739512bc90a31e7eb7de66e637b46a58786e285efb519d03d8b5c85308e0f98 513708 cd-hit_4.8.1-4_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 31 Aug 2022 23:57:18 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-9), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.6.0), bash (= 5.2~rc2-2), binutils (= 2.38.90.20220713-2), binutils-common (= 2.38.90.20220713-2), binutils-x86-64-linux-gnu (= 2.38.90.20220713-2), bsdextrautils (= 2.38.1-1), bsdutils (= 1:2.38.1-1), build-essential (= 12.9), bzip2 (= 1.0.8-5), coreutils (= 8.32-4.1), cpp (= 4:12.2.0-1), cpp-11 (= 11.3.0-5), cpp-12 (= 12.2.0-1), dash (= 0.5.11+git20210903+057cd650a4ed-8), debconf (= 1.5.79), debhelper (= 13.9.1), debianutils (= 5.7-0.3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dmsetup (= 2:1.02.185-1), dpkg (= 1.21.9), dpkg-dev (= 1.21.9), dwz (= 0.14-1), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:12.2.0-1), g++-12 (= 12.2.0-1), gcc (= 4:12.2.0-1), gcc-11 (= 11.3.0-5), gcc-11-base (= 11.3.0-5), gcc-12 (= 12.2.0-1), gcc-12-base (= 12.2.0-1), gettext (= 0.21-9), gettext-base (= 0.21-9), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.12-1), help2man (= 1.49.2), hostname (= 3.23), init-system-helpers (= 1.64), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libapparmor1 (= 3.0.7-1), libarchive-zip-perl (= 1.68-1), libargon2-1 (= 0~20171227-0.3), libasan6 (= 11.3.0-5), libasan8 (= 12.2.0-1), libatomic1 (= 12.2.0-1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libbinutils (= 2.38.90.20220713-2), libblkid1 (= 2.38.1-1), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.34-7), libc-dev-bin (= 2.34-7), libc6 (= 2.34-7), libc6-dev (= 2.34-7), libcap-ng0 (= 0.8.3-1+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 12.2.0-1), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.28-2), libcrypt1 (= 1:4.4.28-2), libcryptsetup12 (= 2:2.5.0-2), libctf-nobfd0 (= 2.38.90.20220713-2), libctf0 (= 2.38.90.20220713-2), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264), libdebhelper-perl (= 13.9.1), libdevmapper1.02.1 (= 2:1.02.185-1), libdpkg-perl (= 1.21.9), libelf1 (= 0.187-1), libfdisk1 (= 2.38.1-1), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.3.0-5), libgcc-12-dev (= 12.2.0-1), libgcc-s1 (= 12.2.0-1), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-1+b1), libgdbm6 (= 1.23-1+b1), libgmp10 (= 2:6.2.1+dfsg1-1), libgomp1 (= 12.2.0-1), libgpg-error0 (= 1.45-2), libgprofng0 (= 2.38.90.20220713-2), libgssapi-krb5-2 (= 1.20-1), libicu71 (= 71.1-3), libip4tc2 (= 1.8.8-1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-1), libjson-c5 (= 0.16-1), libk5crypto3 (= 1.20-1), libkeyutils1 (= 1.6.3-1), libkmod2 (= 30+20220630-3), libkrb5-3 (= 1.20-1), libkrb5support0 (= 1.20-1), liblocale-gettext-perl (= 1.07-4+b2), liblsan0 (= 12.2.0-1), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38.1-1), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.5.2-2), libpam-modules-bin (= 1.5.2-2), libpam-runtime (= 1.5.2-2), libpam0g (= 1.5.2-2), libpcre2-8-0 (= 10.40-1), libpcre3 (= 2:8.39-14), libperl5.34 (= 5.34.0-5), libpipeline1 (= 1.5.6-2), libquadmath0 (= 12.2.0-1), libseccomp2 (= 2.5.4-1+b1), libselinux1 (= 3.4-1+b1), libsmartcols1 (= 2.38.1-1), libssl3 (= 3.0.5-2), libstdc++-12-dev (= 12.2.0-1), libstdc++6 (= 12.2.0-1), libsub-override-perl (= 0.09-3), libsystemd-shared (= 251.4-3), libsystemd0 (= 251.4-3), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-5), libtsan2 (= 12.2.0-1), libubsan1 (= 12.2.0-1), libuchardet0 (= 0.0.7-1), libudev1 (= 251.4-3), libunistring2 (= 1.0-1), libuuid1 (= 2.38.1-1), libxml2 (= 2.9.14+dfsg-1+b1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.18.16-1), login (= 1:4.11.1+dfsg1-2), lsb-base (= 11.2), m4 (= 1.4.19-1), make (= 4.3-4.1), man-db (= 2.10.2-2), mawk (= 1.3.4.20200120-3.1), mount (= 2.38.1-1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.34.0-5), perl-base (= 5.34.0-5), perl-modules-5.34 (= 5.34.0-5), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), systemd (= 251.4-3), sysvinit-utils (= 3.04-1), tar (= 1.34+dfsg-1), util-linux (= 2.38.1-1), util-linux-extra (= 2.38.1-1), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4.1), zlib1g-dev (= 1:1.2.11.dfsg-4.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1629448796" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ cd-hit-dbgsym_4.8.1-4_ppc64el.deb --------------------------------- new Debian package, version 2.0. size 1649972 bytes: control archive=856 bytes. 574 bytes, 12 lines control 724 bytes, 7 lines md5sums Package: cd-hit-dbgsym Source: cd-hit Version: 4.8.1-4 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 1861 Depends: cd-hit (= 4.8.1-4) Section: debug Priority: optional Description: debug symbols for cd-hit Build-Ids: 3aca1bddcb2ac25fa5b4af5073a645b11a50e113 85eda53a5af947b67766feff3df886076ac6c4a5 87d3b1372665fcdee0c8c72414971e29e111b580 a5277547b84ffefec3dd205d5f505b00c15d5ea8 c63794c2f01f6f795d884988a65b4b405033fa3d d7ab0f00527aa181ec7b8820192bfa5c2e1518d0 drwxr-xr-x root/root 0 2021-08-20 08:39 ./ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/3a/ -rw-r--r-- root/root 297744 2021-08-20 08:39 ./usr/lib/debug/.build-id/3a/ca1bddcb2ac25fa5b4af5073a645b11a50e113.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/85/ -rw-r--r-- root/root 291112 2021-08-20 08:39 ./usr/lib/debug/.build-id/85/eda53a5af947b67766feff3df886076ac6c4a5.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/87/ -rw-r--r-- root/root 292896 2021-08-20 08:39 ./usr/lib/debug/.build-id/87/d3b1372665fcdee0c8c72414971e29e111b580.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/a5/ -rw-r--r-- root/root 286904 2021-08-20 08:39 ./usr/lib/debug/.build-id/a5/277547b84ffefec3dd205d5f505b00c15d5ea8.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/c6/ -rw-r--r-- root/root 287392 2021-08-20 08:39 ./usr/lib/debug/.build-id/c6/3794c2f01f6f795d884988a65b4b405033fa3d.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.build-id/d7/ -rw-r--r-- root/root 288064 2021-08-20 08:39 ./usr/lib/debug/.build-id/d7/ab0f00527aa181ec7b8820192bfa5c2e1518d0.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 140112 2021-08-20 08:39 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/cd-hit.debug drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit-dbgsym -> cd-hit cd-hit_4.8.1-4_ppc64el.deb -------------------------- new Debian package, version 2.0. size 513708 bytes: control archive=2156 bytes. 917 bytes, 17 lines control 3461 bytes, 52 lines md5sums Package: cd-hit Version: 4.8.1-4 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 1806 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), perl:any Section: science Priority: optional Homepage: http://weizhongli-lab.org/cd-hit/ Description: suite of programs designed to quickly group sequences cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information. drwxr-xr-x root/root 0 2021-08-20 08:39 ./ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/bin/ lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit -> ../lib/cd-hit/cd-hit lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d -> ../lib/cd-hit/cd-hit-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-2d-para -> ../lib/cd-hit/cd-hit-2d-para.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-454 -> ../lib/cd-hit/cd-hit-454 lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-div -> ../lib/cd-hit/cd-hit-div.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est -> ../lib/cd-hit/cd-hit-est lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-est-2d -> ../lib/cd-hit/cd-hit-est-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cd-hit-para -> ../lib/cd-hit/cd-hit-para.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit -> cd-hit lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-2d -> cd-hit-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-454 -> cd-hit-454 lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est -> cd-hit-est lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/cdhit-est-2d -> cd-hit-est-2d lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr2tree -> ../lib/cd-hit/clstr2tree.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge -> ../lib/cd-hit/clstr_merge.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_merge_noorder -> ../lib/cd-hit/clstr_merge_noorder.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_reduce -> ../lib/cd-hit/clstr_reduce.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_renumber -> ../lib/cd-hit/clstr_renumber.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_rev -> ../lib/cd-hit/clstr_rev.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_by -> ../lib/cd-hit/clstr_sort_by.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/clstr_sort_prot_by -> ../lib/cd-hit/clstr_sort_prot_by.pl lrwxrwxrwx root/root 0 2021-08-20 08:39 ./usr/bin/make_multi_seq -> ../lib/cd-hit/make_multi_seq.pl drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/lib/cd-hit/ -rwxr-xr-x root/root 3152 2021-08-20 08:39 ./usr/lib/cd-hit/FET.pl -rwxr-xr-x root/root 212728 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit -rwxr-xr-x root/root 212728 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d -rwxr-xr-x root/root 12596 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-2d-para.pl -rwxr-xr-x root/root 212808 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-454 -rwxr-xr-x root/root 2126 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-clstr_2_blm8.pl -rwxr-xr-x root/root 212728 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div -rwxr-xr-x root/root 992 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-div.pl -rwxr-xr-x root/root 212728 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est -rwxr-xr-x root/root 212728 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-est-2d -rwxr-xr-x root/root 11859 2021-08-20 08:39 ./usr/lib/cd-hit/cd-hit-para.pl -rwxr-xr-x root/root 952 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2tree.pl -rwxr-xr-x root/root 1209 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2txt.pl -rwxr-xr-x root/root 4503 2021-08-20 08:39 ./usr/lib/cd-hit/clstr2xml.pl -rwxr-xr-x root/root 464 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_cut.pl -rwxr-xr-x root/root 3258 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list.pl -rwxr-xr-x root/root 1129 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_list_sort.pl -rwxr-xr-x root/root 3199 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_merge.pl -rwxr-xr-x root/root 2162 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_merge_noorder.pl -rwxr-xr-x root/root 3465 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_quality_eval.pl -rwxr-xr-x root/root 2335 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_quality_eval_by_link.pl -rwxr-xr-x root/root 1000 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reduce.pl -rwxr-xr-x root/root 196 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_renumber.pl -rwxr-xr-x root/root 554 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rep.pl -rwxr-xr-x root/root 1160 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_reps_faa_rev.pl -rwxr-xr-x root/root 1620 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_rev.pl -rwxr-xr-x root/root 387 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select.pl -rwxr-xr-x root/root 555 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_select_rep.pl -rwxr-xr-x root/root 779 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_histogram.pl -rwxr-xr-x root/root 725 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_size_stat.pl -rwxr-xr-x root/root 806 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sort_by.pl -rwxr-xr-x root/root 1291 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sort_prot_by.pl -rwxr-xr-x root/root 2928 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sql_tbl.pl -rwxr-xr-x root/root 1103 2021-08-20 08:39 ./usr/lib/cd-hit/clstr_sql_tbl_sort.pl -rwxr-xr-x root/root 1670 2021-08-20 08:39 ./usr/lib/cd-hit/make_multi_seq.pl -rwxr-xr-x root/root 3668 2021-08-20 08:39 ./usr/lib/cd-hit/plot_2d.pl -rwxr-xr-x root/root 2190 2021-08-20 08:39 ./usr/lib/cd-hit/plot_len1.pl drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc-base/ -rw-r--r-- root/root 753 2021-08-10 20:30 ./usr/share/doc-base/cd-hit.cd-hit drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/ -rw-r--r-- root/root 771 2021-08-10 20:30 ./usr/share/doc/cd-hit/README.Debian -rw-r--r-- root/root 421458 2019-02-28 20:13 ./usr/share/doc/cd-hit/cdhit-user-guide.pdf -rw-r--r-- root/root 2516 2021-08-20 08:39 ./usr/share/doc/cd-hit/changelog.Debian.gz -rw-r--r-- root/root 962 2019-02-28 20:13 ./usr/share/doc/cd-hit/changelog.gz -rw-r--r-- root/root 1151 2021-08-20 08:39 ./usr/share/doc/cd-hit/copyright drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/doc/cd-hit/examples/ -rw-r--r-- root/root 2269 2021-08-10 20:30 ./usr/share/doc/cd-hit/examples/example.fa drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/ drwxr-xr-x root/root 0 2021-08-20 08:39 ./usr/share/man/man1/ -rw-r--r-- root/root 1145 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d-para.1.gz -rw-r--r-- root/root 417 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-2d.1.gz -rw-r--r-- root/root 423 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-454.1.gz -rw-r--r-- root/root 227 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-div.1.gz -rw-r--r-- root/root 278 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est-2d.1.gz -rw-r--r-- root/root 266 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-est.1.gz -rw-r--r-- root/root 1109 2021-08-20 08:39 ./usr/share/man/man1/cd-hit-para.1.gz -rw-r--r-- root/root 250 2021-08-20 08:39 ./usr/share/man/man1/cd-hit.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [546 B] Get:5 copy:/<>/apt_archive ./ Packages [635 B] Fetched 2144 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 14.3 MB of archives. After this operation, 52.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.3 [19.9 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2~rc2-2 [75.8 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.5-2 [1421 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-4 [51.3 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2~rc2-2 [173 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.35-3 [578 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.39.2-1 [838 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.35-3 [961 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.11.0-1 [2834 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-2 [14.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2 [11.2 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-2 [13.1 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2 [25.6 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-2 [8044 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.62-2 [45.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-1+b2 [124 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-5 [13.1 kB] Get:28 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:29 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.12-1 [93.7 kB] Get:30 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.78-1 [105 kB] Get:31 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.54-1 [224 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:33 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.13-2 [19.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4 [37.5 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.928-2 [11.0 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.32-1 [130 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libexporter-tiny-perl all 1.004000-1 [38.7 kB] Get:48 http://localhost:3142/debian sid/main amd64 liblist-moreutils-xs-perl amd64 0.430-3 [40.3 kB] Get:49 http://localhost:3142/debian sid/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-2 [33.7 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:54 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:55 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2 [104 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:58 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:59 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2 [25.8 kB] Get:60 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1 [29.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-2 [13.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:64 http://localhost:3142/debian sid/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:65 http://localhost:3142/debian sid/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:66 http://localhost:3142/debian sid/main amd64 libfile-find-rule-perl all 0.34-2 [28.4 kB] Get:67 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:69 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:71 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:72 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:73 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.37-1 [80.9 kB] Get:74 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.10-1 [24.0 kB] Get:75 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-2 [21.6 kB] Get:76 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:77 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:78 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:79 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:80 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2 [343 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.074-2 [220 kB] Get:82 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:83 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:84 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:85 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.67-1 [194 kB] Get:86 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:88 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:89 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:90 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:91 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:93 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:94 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-4 [42.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:97 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-3 [18.8 kB] Get:98 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:100 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:101 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:102 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:103 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:104 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-2 [11.9 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2 [13.7 kB] Get:107 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:108 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:109 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1 [17.5 kB] Get:110 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:111 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:112 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:113 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 4.025+ds-1 [103 kB] Get:114 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 4.025+ds-1 [104 kB] Get:115 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-2 [10.7 kB] Get:116 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.25-1 [53.3 kB] Get:117 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:118 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2 [27.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5 [8656 B] Get:120 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:122 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:123 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2 [73.0 kB] Get:124 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:125 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.15-1 [120 kB] Get:126 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:127 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1+b1 [35.9 kB] Get:128 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-4 [64.0 kB] Get:129 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:130 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:131 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:132 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-27 [172 kB] Get:133 http://localhost:3142/debian sid/main amd64 lintian all 2.115.3 [1417 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.3 MB in 0s (110 MB/s) Selecting previously unselected package netbase. (Reading database ... 20650 files and directories currently installed.) Preparing to unpack .../000-netbase_6.3_all.deb ... Unpacking netbase (6.3) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2~rc2-2_all.deb ... Unpacking readline-common (8.2~rc2-2) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.5-2_amd64.deb ... Unpacking openssl (3.0.5-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-4_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-4) ... Selecting previously unselected package libreadline8:amd64. 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Unpacking libapt-pkg-perl (0.1.40+b1) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../013-libb-hooks-op-check-perl_0.22-2_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../014-libdynaloader-functions-perl_0.003-2_all.deb ... Unpacking libdynaloader-functions-perl (0.003-2) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../015-libdevel-callchecker-perl_0.008-1+b3_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b3) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../016-libparams-classify-perl_0.015-2_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... 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Unpacking sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b1) ... Setting up liblz1:amd64 (1.13-4) ... Setting up libberkeleydb-perl:amd64 (0.64-1+b2) ... Setting up plzip (1.10-4) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-1+b3) ... Setting up libmouse-perl (2.5.10-1+b2) ... Setting up libdata-messagepack-perl (1.02-1) ... Setting up libdynaloader-functions-perl (0.003-2) ... Setting up libtext-glob-perl (0.11-2) ... Setting up libclass-method-modifiers-perl (2.13-2) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b2) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-2) ... Setting up libcpanel-json-xs-perl:amd64 (4.32-1) ... Setting up libhtml-tagset-perl (3.20-5) ... Setting up libdevel-size-perl (0.83-2) ... Setting up unzip (6.0-27) ... Setting up libsqlite3-0:amd64 (3.39.2-1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.83+ds-1+b1) ... Setting up libio-interactive-perl (1.023-1) ... Setting up libtry-tiny-perl (0.31-1) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-3) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2) ... Setting up libencode-locale-perl (1.05-2) ... Setting up libassuan0:amd64 (2.5.5-4) ... Setting up libconfig-tiny-perl (2.28-1) ... Setting up libsereal-encoder-perl:amd64 (4.025+ds-1) ... Setting up liblist-utilsby-perl (0.12-1) ... Setting up libnet-netmask-perl (2.0001-1) ... Setting up libsub-install-perl (0.928-2) ... Setting up libnumber-compare-perl (0.03-2) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.25-1) ... Setting up libfile-find-rule-perl (0.34-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-2) ... Setting up libperlio-utf8-strict-perl (0.009-1+b1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-2) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2) ... Setting up liblist-moreutils-xs-perl (0.430-3) ... Setting up libparams-util-perl (1.102-1+b2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-2) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:amd64 (0.26-2) ... Setting up libsyntax-keyword-try-perl (0.27-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-2) ... Setting up netbase (6.3) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-4) ... Setting up libsort-versions-perl (1.62-2) ... Setting up libexporter-tiny-perl (1.004000-1) ... Setting up libterm-readkey-perl (2.38-2) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.5-2) ... Setting up libtext-levenshteinxs-perl (0.03-5) ... Setting up libperlio-gzip-perl (0.20-1) ... Setting up readline-common (8.2~rc2-2) ... Setting up libhtml-html5-entities-perl (0.004-2) ... Setting up libsereal-decoder-perl (4.025+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.12-1) ... Setting up iso-codes (4.11.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.05-1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:amd64 (8.2~rc2-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.78-1) ... Setting up gpgconf (2.2.35-3) ... Setting up libio-socket-ssl-perl (2.074-2) ... Setting up gpg (2.2.35-3) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libhttp-message-perl (6.37-1) ... Setting up libhtml-form-perl (6.10-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl:amd64 (0.015-2) ... Setting up libcgi-pm-perl (4.54-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.15-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.3) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... Processing triggers for man-db (2.10.2-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 20612 Build-Time: 18 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 12 Job: cd-hit_4.8.1-4 Lintian: pass Machine Architecture: amd64 Package: cd-hit Package-Time: 44 Source-Version: 4.8.1-4 Space: 20612 Status: successful Version: 4.8.1-4 -------------------------------------------------------------------------------- Finished at 2022-08-31T23:57:19Z Build needed 00:00:44, 20612k disk space