sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | chip-seq 1.5.5-3 (arm64) Mon, 18 May 2020 01:36:14 +0000 | +==============================================================================+ Package: chip-seq Version: 1.5.5-3 Source Version: 1.5.5-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-101fc4a1-5ab4-4e81-abbe-713e2b1ce588' with '<>' I: NOTICE: Log filtering will replace 'build/chip-seq-Q8X5vj/resolver-p01eAk' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-17-0805.01.pdiff [11.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-17-1400.37.pdiff [18.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-17-2000.12.pdiff [21.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-17-0805.01.pdiff [20.7 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-17-1400.37.pdiff [16.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-17-2000.12.pdiff [21.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-17-2000.12.pdiff [21.9 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-17-2000.12.pdiff [21.1 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8072 kB] Fetched 8384 kB in 2s (5249 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libperl5.30 libsystemd0 libudev1 perl perl-base perl-modules-5.30 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 9222 kB of archives. After this operation, 59.4 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.2-1 [2806 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.2-1 [4024 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.2-1 [290 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 perl-base amd64 5.30.2-1 [1574 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsystemd0 amd64 245.5-3 [360 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libudev1 amd64 245.5-3 [168 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9222 kB in 0s (112 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12640 files and directories currently installed.) Preparing to unpack .../perl_5.30.2-1_amd64.deb ... Unpacking perl (5.30.2-1) over (5.30.0-10) ... Preparing to unpack .../perl-modules-5.30_5.30.2-1_all.deb ... Unpacking perl-modules-5.30 (5.30.2-1) over (5.30.0-10) ... Preparing to unpack .../libperl5.30_5.30.2-1_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.2-1) over (5.30.0-10) ... Preparing to unpack .../perl-base_5.30.2-1_amd64.deb ... Unpacking perl-base (5.30.2-1) over (5.30.0-10) ... Setting up perl-base (5.30.2-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12640 files and directories currently installed.) Preparing to unpack .../libsystemd0_245.5-3_amd64.deb ... Unpacking libsystemd0:amd64 (245.5-3) over (245.5-2) ... Setting up libsystemd0:amd64 (245.5-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12640 files and directories currently installed.) Preparing to unpack .../libudev1_245.5-3_amd64.deb ... Unpacking libudev1:amd64 (245.5-3) over (245.5-2) ... Setting up libudev1:amd64 (245.5-3) ... Setting up perl-modules-5.30 (5.30.2-1) ... Setting up libperl5.30:amd64 (5.30.2-1) ... Setting up perl (5.30.2-1) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'chip-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/chip-seq.git Please use: git clone https://salsa.debian.org/med-team/chip-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5268 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (dsc) [2020 B] Get:2 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (tar) [5258 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (diff) [8840 B] Fetched 5268 kB in 0s (77.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/chip-seq-Q8X5vj/chip-seq-1.5.5' with '<>' I: NOTICE: Log filtering will replace 'build/chip-seq-Q8X5vj' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [402 B] Get:5 copy:/<>/apt_archive ./ Packages [492 B] Fetched 1851 B in 0s (72.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libicu63 libio-string-perl libitm1:arm64 libitm1-arm64-cross liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 libstdc++-9-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:arm64 libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libicu63 libio-string-perl libitm1:arm64 libitm1-arm64-cross liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:arm64 sensible-utils ucf 0 upgraded, 100 newly installed, 0 to remove and 0 not upgraded. Need to get 78.5 MB of archives. After this operation, 332 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.1.0-1 [197 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-12 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0039 [68.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.34-8 [2790 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-12 [1701 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-12 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu-base amd64 9.3.0-8cross1 [197 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [6544 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-8cross1 [192 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10-20200418-1cross1 [192 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.30-2cross1 [1246 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10-20200418-1cross1 [34.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10-20200418-1cross1 [87.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10-20200418-1cross1 [22.9 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10-20200418-1cross1 [8608 B] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.3.0-8cross1 [347 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10-20200418-1cross1 [125 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10-20200418-1cross1 [285 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10-20200418-1cross1 [408 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10-20200418-1cross1 [122 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-arm64-cross all 9.3.0-8cross1 [887 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [6922 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1460 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.4.19-1cross1 [1153 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.30-2cross1 [2265 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-arm64-cross all 9.3.0-8cross1 [1637 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [7127 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1180 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5 [709 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.1 [187 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.0-1 [24.2 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.0-1 [14.8 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.2-1 [1343 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.1 [1012 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.1.0-1 [34.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.16-1 [90.4 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.30-8 [2468 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-12 [354 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.1.0-1 [9476 B] Get:90 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.6.7-1 [1079 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.16-1 [111 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.30-8 [2281 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.1.0-1 [91.0 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.1.0-1 [23.8 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.1.0-1 [126 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.1.0-1 [293 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.1.0-1 [450 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.1.0-1 [123 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-12 [886 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-12 [1659 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 78.5 MB in 1s (112 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12640 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Setting up linux-libc-dev:arm64 (5.6.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up binutils-aarch64-linux-gnu (2.34-8) ... Setting up cpp-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up file (1:5.38-5) ... Setting up libyaml-perl (1.30-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:arm64 (10.1.0-1) ... Setting up cpp-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.30-2cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-8cross1) ... Setting up gcc-10-cross-base (10-20200418-1cross1) ... Setting up linux-libc-dev-arm64-cross (5.4.19-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:arm64 (9.3.0-12) ... Setting up libgcc-s1-arm64-cross (10-20200418-1cross1) ... Setting up libatomic1-arm64-cross (10-20200418-1cross1) ... Setting up libfile-stripnondeterminism-perl (1.8.0-1) ... Setting up liblsan0-arm64-cross (10-20200418-1cross1) ... Setting up libgomp1-arm64-cross (10-20200418-1cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-12) ... Setting up libtool (2.4.6-14) ... Setting up libtsan0-arm64-cross (10-20200418-1cross1) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.30-2cross1) ... Setting up libasan5-arm64-cross (9.3.0-8cross1) ... Setting up libstdc++6-arm64-cross (10-20200418-1cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (10-20200418-1cross1) ... Setting up ucf (3.0039) ... Setting up g++-9 (9.3.0-12) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (10-20200418-1cross1) ... Setting up libgcc-9-dev-arm64-cross (9.3.0-8cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-9-dev-arm64-cross (9.3.0-8cross1) ... Setting up gcc-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up po-debconf (1.0.21) ... Setting up g++-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libcrypt1:arm64 (1:4.4.16-1) ... Setting up libgcc-s1:arm64 (10.1.0-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.30-8) ... Setting up libcrypt-dev:arm64 (1:4.4.16-1) ... Setting up libc6-dev:arm64 (2.30-8) ... Setting up libstdc++6:arm64 (10.1.0-1) ... Setting up liblsan0:arm64 (10.1.0-1) ... Setting up libitm1:arm64 (10.1.0-1) ... Setting up libtsan0:arm64 (10.1.0-1) ... Setting up debhelper (13.1) ... Setting up libgomp1:arm64 (10.1.0-1) ... Setting up libasan5:arm64 (9.3.0-12) ... Setting up libatomic1:arm64 (10.1.0-1) ... Setting up libubsan1:arm64 (10.1.0-1) ... Setting up libgcc-9-dev:arm64 (9.3.0-12) ... Setting up libstdc++-9-dev:arm64 (9.3.0-12) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-8 dpkg-dev_1.19.7 g++-9_9.3.0-12 gcc-9_9.3.0-12 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-12 libstdc++-9-dev-arm64-cross_9.3.0-8cross1 libstdc++6_10.1.0-1 libstdc++6-arm64-cross_10-20200418-1cross1 linux-libc-dev_5.6.7-1 Package versions: adduser_3.118 apt_2.1.2 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8 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------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: chip-seq Binary: chip-seq, chip-seq-data Architecture: any all Version: 1.5.5-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://ccg.epfl.ch//chipseq Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/chip-seq Vcs-Git: https://salsa.debian.org/med-team/chip-seq.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12) Package-List: chip-seq deb science optional arch=any chip-seq-data deb science optional arch=all Checksums-Sha1: c1d0fe6c413dbfcfc248a9ed2f49838a4b1384ac 5257567 chip-seq_1.5.5.orig.tar.gz 08d2558d0740ecc3cf754e4effad0821503c13fc 8840 chip-seq_1.5.5-3.debian.tar.xz Checksums-Sha256: ce432340e879a629001ecc4c14886e974ec3caea1b723e41f1a7a1a431a2a035 5257567 chip-seq_1.5.5.orig.tar.gz 654d5dadedc5c1fa9e46f65a6ffdc1fa1571715e80f4c1b6e5908a63047e20b1 8840 chip-seq_1.5.5-3.debian.tar.xz Files: 4e08c0558e2304415c766fa0bd3cbebd 5257567 chip-seq_1.5.5.orig.tar.gz 1c60740cc4de88131a34ce223804e7d5 8840 chip-seq_1.5.5-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6AfK0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH9pw//Q+k06DReYj+ySxxsnc8PjyhPAOXtBVJQ Wfl8dGzJBxSDbhoVk8D3U2kPnNkZ93NxJW04YE1VqyzHxWwAYRfLDd/0bR+rTnCy G72eBesSbwHq3IA2UA/aSaLJYhxHNBapKRZE4ecHRCkUqxEME3qRRhDK6t+YBzhW kFrKLcJ+E6urKBUZtVjJuvPxhVNkFf6yFsnblmXe6rSr6NmM6iDUe83yM474vL0s nabkrmIV79lSVnUKzJfmnDP9/4jlgJDiCYk6Zf4SsliTualE2QoWxHVemBODz74m BM6XEzVco47aUHrwgPIQzE1CJaPH4fbm5yfPZrIue4JjnBBCbZPjSALzi882+I0G qzE4GV7Xh+wByeN+H8BNnw3q7v1Shlhb6+rTkPHiA5Vu4oCfDuohdYGrqpyv4RM8 tR+E+MEHsZNxATRFT9Q/yK8tmhZLkwsruj1nEjTTGMK+1HSXERpkOHYw2uDh6BWj 2+MaQdMPgrpoWcf3KZNH6fjzxE4NiuEmVpnB50Y4SAnO7qiOw6sa6tEvJIFxNsOu RvKXzfqJ1kp9y60rugsFZA4xBuVAevhhNMADknkWL9jj5UWrJU7O4c+dtqcOhfZI FfMUFJY+A6AX7XdeaiOqvGCShFZ1HoxLKzxZjcQXfjOTf34D24pcOabTGTguQaJH AeXBodqO+88= =qQRt -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sun Mar 29 10:47:09 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./chip-seq_1.5.5-3.dsc dpkg-source: info: extracting chip-seq in /<> dpkg-source: info: unpacking chip-seq_1.5.5.orig.tar.gz dpkg-source: info: unpacking chip-seq_1.5.5-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_makefile.patch dpkg-source: info: applying data_location.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-101fc4a1-5ab4-4e81-abbe-713e2b1ce588 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package chip-seq dpkg-buildpackage: info: source version 1.5.5-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -rf chipcor chipextract chippart chippeak chipcenter chipscore tools/compactsga tools/countsga tools/featreplace tools/filter_counts tools/bed2sga tools/bed2bed_display tools/sga2bed tools/sga2wig *.o *~ make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[1]: Entering directory '/<>' aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipcor chipcor.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipextract chipextract.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chippart chippart.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashtable.o hashtable.c hashtable.c: In function ‘MurmurHash3_x86_32’: hashtable.c:539:14: warning: this statement may fall through [-Wimplicit-fallthrough=] 539 | case 3: k1 ^= tail[2] << 16; | ~~~^~~~~~~~~~~~~~~~ hashtable.c:540:3: note: here 540 | case 2: k1 ^= tail[1] << 8; | ^~~~ hashtable.c:540:14: warning: this statement may fall through [-Wimplicit-fallthrough=] 540 | case 2: k1 ^= tail[1] << 8; | ~~~^~~~~~~~~~~~~~~ hashtable.c:541:3: note: here 541 | case 1: k1 ^= tail[0]; | ^~~~ aarch64-linux-gnu-gcc -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm -o chippeak chippeak.c hashtable.o aarch64-linux-gnu-gcc -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm -o chipcenter chipcenter.c hashtable.o aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipscore chipscore.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/compactsga tools/compactsga.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/countsga tools/countsga.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/featreplace tools/featreplace.c aarch64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/filter_counts tools/filter_counts.c aarch64-linux-gnu-gcc -o tools/bed2sga tools/bed2sga.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm aarch64-linux-gnu-gcc -o tools/bed2bed_display tools/bed2bed_display.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm aarch64-linux-gnu-gcc -o tools/sga2bed tools/sga2bed.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm aarch64-linux-gnu-gcc -o tools/sga2wig tools/sga2wig.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>' mkdir -p /<>/debian/tmp/usr/bin mv chipcor chipextract chippart chippeak chipcenter chipscore tools/compactsga tools/countsga tools/featreplace tools/filter_counts tools/bed2sga tools/bed2bed_display tools/sga2bed tools/sga2wig /<>/debian/tmp/usr/bin cp -p tools/check_bed.pl tools/chr_replace_sga.pl tools/eland2sga.pl tools/fps2sga.pl tools/gff2sga.pl tools/partit2bed.pl tools/partit2gff.pl tools/sga2fps.pl tools/sga2gff.pl /<>/debian/tmp/usr/bin make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install for perlscript in `grep -lR '#!/usr/local/bin/perl' debian/*/usr` ; do \ sed -i '1s+#!/usr/local/bin/perl+#!/usr/bin/perl+' ${perlscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a debian/rules override_dh_installman make[1]: Entering directory '/<>' dh_installman --language=C make[1]: Leaving directory '/<>' dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package chip-seq: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package chip-seq: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'chip-seq' in '../chip-seq_1.5.5-3_arm64.deb'. dpkg-deb: building package 'chip-seq-dbgsym' in '../chip-seq-dbgsym_1.5.5-3_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../chip-seq_1.5.5-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-05-18T01:36:58Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ chip-seq_1.5.5-3_arm64.changes: ------------------------------- Format: 1.8 Date: Sun, 29 Mar 2020 12:44:42 +0200 Source: chip-seq Binary: chip-seq chip-seq-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.5.5-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: chip-seq - tools performing common ChIP-Seq data analysis tasks Changes: chip-seq (1.5.5-3) unstable; urgency=medium . * Fix arch only build Checksums-Sha1: 4be6c267e2a54b6036997fd7ad3304315b5ed64f 118432 chip-seq-dbgsym_1.5.5-3_arm64.deb 489fc95ebf820cbcec51bf7f452f987013ae8b83 4553 chip-seq_1.5.5-3_arm64.buildinfo e124862c4b984dfb8502b4537f59ebe58204a1e6 99864 chip-seq_1.5.5-3_arm64.deb Checksums-Sha256: 790e0cd936a51affa1cce80c332995344b53da95af813271e4c0d0b0615bd47f 118432 chip-seq-dbgsym_1.5.5-3_arm64.deb 4b96edd1873d16a2e835829f607d80df05c22156bb8412df66d9d4916f0e9ef5 4553 chip-seq_1.5.5-3_arm64.buildinfo a3a879545903f5a0b6b054305fd5b5f5fdbe8e2478eb7aa941c15e91c2ec850c 99864 chip-seq_1.5.5-3_arm64.deb Files: c456de744f0fbb6bb95e1fab5e7bb4c2 118432 debug optional chip-seq-dbgsym_1.5.5-3_arm64.deb 3b77b878090a70680c2c1bbd7414a4dc 4553 science optional chip-seq_1.5.5-3_arm64.buildinfo 4dcda138b716e874f3b44de236374285 99864 science optional chip-seq_1.5.5-3_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: chip-seq Binary: chip-seq chip-seq-data Architecture: arm64 Version: 1.5.5-3 Checksums-Md5: c456de744f0fbb6bb95e1fab5e7bb4c2 118432 chip-seq-dbgsym_1.5.5-3_arm64.deb 4dcda138b716e874f3b44de236374285 99864 chip-seq_1.5.5-3_arm64.deb Checksums-Sha1: 4be6c267e2a54b6036997fd7ad3304315b5ed64f 118432 chip-seq-dbgsym_1.5.5-3_arm64.deb e124862c4b984dfb8502b4537f59ebe58204a1e6 99864 chip-seq_1.5.5-3_arm64.deb Checksums-Sha256: 790e0cd936a51affa1cce80c332995344b53da95af813271e4c0d0b0615bd47f 118432 chip-seq-dbgsym_1.5.5-3_arm64.deb a3a879545903f5a0b6b054305fd5b5f5fdbe8e2478eb7aa941c15e91c2ec850c 99864 chip-seq_1.5.5-3_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 18 May 2020 01:36:58 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-8), binutils-common (= 2.34-8), binutils-x86-64-linux-gnu (= 2.34-8), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.35.1-5), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-12), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.0-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-12), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-1), gcc-9 (= 9.3.0-12), gcc-9-base (= 9.3.0-12), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-12), libatomic1 (= 10.1.0-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-8), libblkid1 (= 2.35.1-5), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10.1.0-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-8), libctf0 (= 2.34-8), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13.1), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.0-1), libgcc-9-dev (= 9.3.0-12), libgcc-s1 (= 10.1.0-1), libgcc1 (= 1:10.1.0-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.2-1), libgmp10 (= 2:6.2.0+dfsg-4), libgomp1 (= 10.1.0-1), libgpg-error0 (= 1.37-1), libicu63 (= 63.2-3), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-1), liblsan0 (= 10.1.0-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.1-5), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.2-1), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10.1.0-1), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.1-5), libstdc++-9-dev (= 9.3.0-12), libstdc++6 (= 10.1.0-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.5-3), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-1), libubsan1 (= 10.1.0-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.5-3), libunistring2 (= 0.9.10-2), libuuid1 (= 2.35.1-5), libxml2 (= 2.9.10+dfsg-5), linux-libc-dev (= 5.6.7-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-2+b1), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.2-1), perl-base (= 5.30.2-1), perl-modules-5.30 (= 5.30.2-1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.1-5), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1585478682" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ chip-seq-dbgsym_1.5.5-3_arm64.deb --------------------------------- new Debian package, version 2.0. size 118432 bytes: control archive=1236 bytes. 907 bytes, 12 lines control 1570 bytes, 15 lines md5sums Package: chip-seq-dbgsym Source: chip-seq Version: 1.5.5-3 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 274 Depends: chip-seq (= 1.5.5-3) Section: debug Priority: optional Description: debug symbols for chip-seq Build-Ids: 008ba84c65ab9ab34bf67c2526219b8e40ecaf2a 0aac1953114ce501e6c24e0fd1fb8993986bd8d7 115ffbd8a61149024553c6732500237df5113b37 23b4fc3501472ce425f75de65a959750a49a1011 2efa827df90e3f485f1fca934fef6689d4061001 3e2fba5da7fab20845bfaa2b10fb45eb2e1dab3b 503e3dc0a3a1487bcb7a02303466c47190c9ff97 5d35989002910450699fb7e6cf4734b67e93bbe7 816272029965b072f3e7f7938ac16d6d40a5190c 8ef660520f3e9ed57c20b26ead67aabf3a57ff2b 919486c9b06a17b8b0bb21cc50bd36a87816a70b f370b91b4873fbac2f49ce8a2efb88e64036c840 f4daa8b531935620e0b2a4b873785275c57eba56 f85e8e91af50711f0ba3cbda88205cefc911ba3f drwxr-xr-x root/root 0 2020-03-29 10:44 ./ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/00/ -rw-r--r-- root/root 18424 2020-03-29 10:44 ./usr/lib/debug/.build-id/00/8ba84c65ab9ab34bf67c2526219b8e40ecaf2a.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/0a/ -rw-r--r-- root/root 11776 2020-03-29 10:44 ./usr/lib/debug/.build-id/0a/ac1953114ce501e6c24e0fd1fb8993986bd8d7.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/11/ -rw-r--r-- root/root 19192 2020-03-29 10:44 ./usr/lib/debug/.build-id/11/5ffbd8a61149024553c6732500237df5113b37.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 12888 2020-03-29 10:44 ./usr/lib/debug/.build-id/23/b4fc3501472ce425f75de65a959750a49a1011.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/2e/ -rw-r--r-- root/root 16400 2020-03-29 10:44 ./usr/lib/debug/.build-id/2e/fa827df90e3f485f1fca934fef6689d4061001.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/3e/ -rw-r--r-- root/root 12288 2020-03-29 10:44 ./usr/lib/debug/.build-id/3e/2fba5da7fab20845bfaa2b10fb45eb2e1dab3b.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/50/ -rw-r--r-- root/root 16632 2020-03-29 10:44 ./usr/lib/debug/.build-id/50/3e3dc0a3a1487bcb7a02303466c47190c9ff97.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/5d/ -rw-r--r-- root/root 16624 2020-03-29 10:44 ./usr/lib/debug/.build-id/5d/35989002910450699fb7e6cf4734b67e93bbe7.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/81/ -rw-r--r-- root/root 17928 2020-03-29 10:44 ./usr/lib/debug/.build-id/81/6272029965b072f3e7f7938ac16d6d40a5190c.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/8e/ -rw-r--r-- root/root 39920 2020-03-29 10:44 ./usr/lib/debug/.build-id/8e/f660520f3e9ed57c20b26ead67aabf3a57ff2b.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/91/ -rw-r--r-- root/root 17192 2020-03-29 10:44 ./usr/lib/debug/.build-id/91/9486c9b06a17b8b0bb21cc50bd36a87816a70b.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/f3/ -rw-r--r-- root/root 12480 2020-03-29 10:44 ./usr/lib/debug/.build-id/f3/70b91b4873fbac2f49ce8a2efb88e64036c840.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/f4/ -rw-r--r-- root/root 17144 2020-03-29 10:44 ./usr/lib/debug/.build-id/f4/daa8b531935620e0b2a4b873785275c57eba56.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/f8/ -rw-r--r-- root/root 15992 2020-03-29 10:44 ./usr/lib/debug/.build-id/f8/5e8e91af50711f0ba3cbda88205cefc911ba3f.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 4016 2020-03-29 10:44 ./usr/lib/debug/.dwz/aarch64-linux-gnu/chip-seq.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq-dbgsym -> chip-seq chip-seq_1.5.5-3_arm64.deb -------------------------- new Debian package, version 2.0. size 99864 bytes: control archive=2216 bytes. 1369 bytes, 29 lines control 2826 bytes, 46 lines md5sums Package: chip-seq Version: 1.5.5-3 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 456 Depends: libc6 (>= 2.17), chip-seq-data, libmath-round-perl Section: science Priority: optional Homepage: https://ccg.epfl.ch//chipseq Description: tools performing common ChIP-Seq data analysis tasks The ChIP-Seq software provides a set of tools performing common genome- wide ChIP- seq analysis tasks, including positional correlation analysis, peak detection, and genome partitioning into signal-rich and signal-poor regions. These tools exist as stand-alone C programs and perform the following tasks: . 1. Positional correlation analysis and generation of an aggregation plot (AP) (chipcor), 2. Extraction of specific genome annotation features around reference anchor points (chipextract), 3. Read centering or shifting (chipcenter), 4. Narrow peak caller using a fixed width peak size (chippeak), 5. Broad peak caller used for large regions of enrichment (chippart), 6. Feature selection tool based on a read count threshold (chipscore). . Because the ChIP-Seq tools are primarily optimized for speed, they use their own compact format for ChIP-seq data representation called SGA (Simplified Genome Annotation). SGA is a line-oriented, tab-delimited plain text format. drwxr-xr-x root/root 0 2020-03-29 10:44 ./ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/bin/ -rwxr-xr-x root/root 23392 2020-03-29 10:44 ./usr/bin/bed2bed_display -rwxr-xr-x root/root 31576 2020-03-29 10:44 ./usr/bin/bed2sga -rwxr-xr-x root/root 1721 2020-03-29 10:44 ./usr/bin/check_bed.pl -rwxr-xr-x root/root 27024 2020-03-29 10:44 ./usr/bin/chipcenter -rwxr-xr-x root/root 27064 2020-03-29 10:44 ./usr/bin/chipcor -rwxr-xr-x root/root 51600 2020-03-29 10:44 ./usr/bin/chipextract -rwxr-xr-x root/root 22936 2020-03-29 10:44 ./usr/bin/chippart -rwxr-xr-x root/root 31152 2020-03-29 10:44 ./usr/bin/chippeak -rwxr-xr-x root/root 22944 2020-03-29 10:44 ./usr/bin/chipscore -rwxr-xr-x root/root 920 2020-03-29 10:44 ./usr/bin/chr_replace_sga.pl -rwxr-xr-x root/root 10560 2020-03-29 10:44 ./usr/bin/compactsga -rwxr-xr-x root/root 14696 2020-03-29 10:44 ./usr/bin/countsga -rwxr-xr-x root/root 4397 2020-03-29 10:44 ./usr/bin/eland2sga.pl -rwxr-xr-x root/root 14680 2020-03-29 10:44 ./usr/bin/featreplace -rwxr-xr-x root/root 14680 2020-03-29 10:44 ./usr/bin/filter_counts -rwxr-xr-x root/root 3005 2015-12-10 14:18 ./usr/bin/fps2sga.pl -rwxr-xr-x root/root 19480 2020-03-29 10:44 ./usr/bin/gff2sga.pl -rwxr-xr-x root/root 9591 2020-03-29 10:44 ./usr/bin/partit2bed.pl -rwxr-xr-x root/root 1512 2020-03-29 10:44 ./usr/bin/partit2gff.pl -rwxr-xr-x root/root 31584 2020-03-29 10:44 ./usr/bin/sga2bed -rwxr-xr-x root/root 4910 2020-03-29 10:44 ./usr/bin/sga2fps.pl -rwxr-xr-x root/root 10560 2020-03-29 10:44 ./usr/bin/sga2gff.pl -rwxr-xr-x root/root 31800 2020-03-29 10:44 ./usr/bin/sga2wig drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq/ -rw-r--r-- root/root 286 2020-03-29 10:44 ./usr/share/doc/chip-seq/changelog.Debian.gz -rw-r--r-- root/root 1111 2020-03-29 10:44 ./usr/share/doc/chip-seq/copyright drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq/examples/ -rw-r--r-- root/root 462 2020-03-29 10:44 ./usr/share/doc/chip-seq/examples/H3K4me3.sga drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 117 2020-03-29 10:44 ./usr/share/lintian/overrides/chip-seq drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/man/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/man/man1/ -rw-r--r-- root/root 918 2020-03-29 10:44 ./usr/share/man/man1/bed2bed_display.1.gz -rw-r--r-- root/root 839 2020-03-29 10:44 ./usr/share/man/man1/bed2sga.1.gz -rw-r--r-- root/root 883 2020-03-29 10:44 ./usr/share/man/man1/chipcenter.1.gz -rw-r--r-- root/root 1287 2020-03-29 10:44 ./usr/share/man/man1/chipcor.1.gz -rw-r--r-- root/root 1154 2020-03-29 10:44 ./usr/share/man/man1/chipextract.1.gz -rw-r--r-- root/root 1193 2020-03-29 10:44 ./usr/share/man/man1/chippart.1.gz -rw-r--r-- root/root 1206 2020-03-29 10:44 ./usr/share/man/man1/chippeak.1.gz -rw-r--r-- root/root 1178 2020-03-29 10:44 ./usr/share/man/man1/chipscore.1.gz -rw-r--r-- root/root 463 2020-03-29 10:44 ./usr/share/man/man1/compactsga.1.gz -rw-r--r-- root/root 628 2020-03-29 10:44 ./usr/share/man/man1/countsga.1.gz -rw-r--r-- root/root 508 2020-03-29 10:44 ./usr/share/man/man1/featreplace.1.gz -rw-r--r-- root/root 616 2020-03-29 10:44 ./usr/share/man/man1/filter_counts.1.gz -rw-r--r-- root/root 502 2020-03-29 10:44 ./usr/share/man/man1/fps2sga.pl.1.gz -rw-r--r-- root/root 524 2020-03-29 10:44 ./usr/share/man/man1/gff2sga.pl.1.gz -rw-r--r-- root/root 589 2020-03-29 10:44 ./usr/share/man/man1/partit2bed.pl.1.gz -rw-r--r-- root/root 936 2020-03-29 10:44 ./usr/share/man/man1/sga2bed.1.gz -rw-r--r-- root/root 503 2020-03-29 10:44 ./usr/share/man/man1/sga2fps.pl.1.gz -rw-r--r-- root/root 494 2020-03-29 10:44 ./usr/share/man/man1/sga2gff.pl.1.gz -rw-r--r-- root/root 1433 2020-03-29 10:44 ./usr/share/man/man1/sga2wig.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [534 B] Get:5 copy:/<>/apt_archive ./ Packages [618 B] Fetched 2115 B in 0s (81.4 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: libclass-xsaccessor-perl : Depends: perl (< 5.30.1~) but 5.30.2-1 is to be installed E: Error, pkgProblemResolver::Resolve generated breaks, this may be caused by held packages. apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 23372 Build-Time: 15 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 17 Job: chip-seq_1.5.5-3 Lintian: error Machine Architecture: amd64 Package: chip-seq Package-Time: 44 Source-Version: 1.5.5-3 Space: 23372 Status: successful Version: 1.5.5-3 -------------------------------------------------------------------------------- Finished at 2020-05-18T01:36:58Z Build needed 00:00:44, 23372k disk space