sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | chip-seq 1.5.5-3 (arm64) Tue, 27 Jul 2021 10:35:56 +0000 | +==============================================================================+ Package: chip-seq Version: 1.5.5-3 Source Version: 1.5.5-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-c477eba2-e614-4fcd-a392-06611365d664' with '<>' I: NOTICE: Log filtering will replace 'build/chip-seq-Csm5pc/resolver-c8mX9c' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [161 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-07-27-0801.26-F-2021-07-27-0801.26.pdiff [248 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-07-27-0801.26-F-2021-07-27-0801.26.pdiff [248 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-07-27-0801.26-F-2021-07-27-0801.26.pdiff [692 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-07-27-0801.26-F-2021-07-27-0801.26.pdiff [692 B] Get:6 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8511 kB] Fetched 8800 kB in 3s (3018 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'chip-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/chip-seq.git Please use: git clone https://salsa.debian.org/med-team/chip-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5268 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (dsc) [2020 B] Get:2 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (tar) [5258 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main chip-seq 1.5.5-3 (diff) [8840 B] Fetched 5268 kB in 0s (114 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/chip-seq-Csm5pc/chip-seq-1.5.5' with '<>' I: NOTICE: Log filtering will replace 'build/chip-seq-Csm5pc' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [402 B] Get:5 copy:/<>/apt_archive ./ Packages [491 B] Fetched 1850 B in 0s (73.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libnsl-dev libnsl-dev:arm64 libnsl2:arm64 libperl5.32 libpipeline1 libsigsegv2 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db perl perl-modules-5.32 po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 gnupg git bzr krb5-doc:arm64 krb5-user:arm64 libstdc++-10-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:arm64 libnss-nis:arm64 libnss-nisplus:arm64 libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libnsl-dev libnsl-dev:arm64 libnsl2:arm64 libperl5.32 libpipeline1 libsigsegv2 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db perl perl-modules-5.32 po-debconf sbuild-build-depends-main-dummy:arm64 sensible-utils ucf 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded. Need to get 228 MB of archives. After this operation, 1024 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-7 [145 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-4 [2823 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-4 [4117 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-4 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.2.1-6 [201 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.4.0-1 [199 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-14 [313 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.3-2 [814 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.35.2-2 [2813 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.18-4 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.1-1 [190 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-13 [2344 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.1-6 [1741 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.1-6 [9380 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu-base amd64 10.2.1-6cross1 [202 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-aarch64-linux-gnu amd64 10.2.1-6cross1 [46.6 MB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:10.2.1-1 [16.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu1 [31.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.1-6cross1 [197 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.31-9cross4 [1233 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10.2.1-6cross1 [34.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10.2.1-6cross1 [89.5 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10.2.1-6cross1 [23.4 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10.2.1-6cross1 [9240 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-arm64-cross all 10.2.1-6cross1 [1994 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10.2.1-6cross1 [793 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10.2.1-6cross1 [1949 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10.2.1-6cross1 [410 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10.2.1-6cross1 [759 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-arm64-cross all 10.2.1-6cross1 [880 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu amd64 10.2.1-6cross1 [53.2 MB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:10.2.1-1 [1460 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.10.13-1cross4 [1375 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.31-9cross4 [2030 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-arm64-cross all 10.2.1-6cross1 [1682 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-aarch64-linux-gnu amd64 10.2.1-6cross1 [49.7 MB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:10.2.1-1 [1176 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.9 [6708 B] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.183-3 [165 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.3.4 [1049 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.2.1-6 [34.6 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.18-4 [89.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.31-13 [2458 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.4.0-1 [2675 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.2.1-6 [9468 B] Get:93 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.10.46-2 [1342 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.18-4 [108 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.46.2-2 [74.0 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.18.3-6 [64.8 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.18.3-6 [114 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6.1-2 [15.4 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1k-1 [1386 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.18.3-6 [346 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.18.3-6 [155 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main arm64 libtirpc3 arm64 1.3.1-1 [80.0 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main arm64 libnsl2 arm64 1.3.0-2 [36.9 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main arm64 libtirpc-dev arm64 1.3.1-1 [192 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main arm64 libnsl-dev arm64 1.3.0-2 [66.1 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.31-13 [2030 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.2.1-6 [91.6 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.2.1-6 [23.8 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.2.1-6 [794 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.2.1-6 [1957 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.2.1-6 [451 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.2.1-6 [759 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.4.0-1 [881 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.4.0-1 [1669 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 228 MB in 2s (129 MB/s) Selecting previously unselected package bsdextrautils. 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Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up perl-modules-5.32 (5.32.1-4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:arm64 (5.10.46-2) ... Setting up gettext-base (0.21-4) ... Setting up binutils-aarch64-linux-gnu (2.35.2-2) ... Setting up file (1:5.39-3) ... Setting up gcc-10-base:arm64 (10.2.1-6) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libtirpc-dev:amd64 (1.3.1-1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up libc6-arm64-cross (2.31-9cross4) ... Setting up autopoint (0.21-4) ... Setting up libperl5.32:amd64 (5.32.1-4) ... Setting up gcc-10-cross-base (10.2.1-6cross1) ... Setting up linux-libc-dev-arm64-cross (5.10.13-1cross4) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.14) ... Setting up libcrypt-dev:amd64 (1:4.4.18-4) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-13) ... Setting up libelf1:amd64 (0.183-3) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gcc-9-base:arm64 (9.4.0-1) ... Setting up libgcc-s1-arm64-cross (10.2.1-6cross1) ... Setting up gcc-10-aarch64-linux-gnu-base:amd64 (10.2.1-6cross1) ... Setting up libatomic1-arm64-cross (10.2.1-6cross1) ... Setting up liblsan0-arm64-cross (10.2.1-6cross1) ... Setting up libgomp1-arm64-cross (10.2.1-6cross1) ... Setting up gettext (0.21-4) ... Setting up libstdc++-10-dev:amd64 (10.2.1-6) ... Setting up g++-10 (10.2.1-6) ... Setting up libtool (2.4.6-15) ... Setting up libasan6-arm64-cross (10.2.1-6cross1) ... Setting up libtsan0-arm64-cross (10.2.1-6cross1) ... Setting up m4 (1.4.18-5) ... Setting up libc6-dev-arm64-cross (2.31-9cross4) ... Setting up libstdc++6-arm64-cross (10.2.1-6cross1) ... Setting up perl (5.32.1-4) ... Setting up libitm1-arm64-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.69-14) ... Setting up g++ (4:10.2.1-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-6) ... Setting up cpp-10-aarch64-linux-gnu (10.2.1-6cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up libubsan1-arm64-cross (10.2.1-6cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-arm64-cross (10.2.1-6cross1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up cpp-aarch64-linux-gnu (4:10.2.1-1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libstdc++-10-dev-arm64-cross (10.2.1-6cross1) ... Setting up gcc-10-aarch64-linux-gnu (10.2.1-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-10-aarch64-linux-gnu (10.2.1-6cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up gcc-aarch64-linux-gnu (4:10.2.1-1) ... Setting up debhelper (13.3.4) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:10.2.1-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-arm64 (12.9) ... Setting up libcrypt1:arm64 (1:4.4.18-4) ... Setting up libgcc-s1:arm64 (10.2.1-6) ... Setting up libc6:arm64 (2.31-13) ... Setting up libcrypt-dev:arm64 (1:4.4.18-4) ... Setting up libstdc++6:arm64 (10.2.1-6) ... Setting up liblsan0:arm64 (10.2.1-6) ... Setting up libitm1:arm64 (10.2.1-6) ... Setting up libtsan0:arm64 (10.2.1-6) ... Setting up libkeyutils1:arm64 (1.6.1-2) ... Setting up libssl1.1:arm64 (1.1.1k-1) ... Setting up libcom-err2:arm64 (1.46.2-2) ... Setting up libgomp1:arm64 (10.2.1-6) ... Setting up libkrb5support0:arm64 (1.18.3-6) ... Setting up libasan5:arm64 (9.4.0-1) ... Setting up libatomic1:arm64 (10.2.1-6) ... Setting up libk5crypto3:arm64 (1.18.3-6) ... Setting up libubsan1:arm64 (10.2.1-6) ... Setting up libkrb5-3:arm64 (1.18.3-6) ... Setting up libgcc-9-dev:arm64 (9.4.0-1) ... Setting up libgssapi-krb5-2:arm64 (1.18.3-6) ... Setting up libtirpc3:arm64 (1.3.1-1) ... Setting up libtirpc-dev:arm64 (1.3.1-1) ... Setting up libnsl2:arm64 (1.3.0-2) ... Setting up libnsl-dev:arm64 (1.3.0-2) ... Setting up libc6-dev:arm64 (2.31-13) ... Setting up libstdc++-9-dev:arm64 (9.4.0-1) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.31-13) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-2 (2021-06-21) amd64 (x86_64) Toolchain package versions: binutils_2.35.2-2 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-13 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-arm64-cross_10.2.1-6cross1 libstdc++-9-dev_9.4.0-1 libstdc++6_10.2.1-6 libstdc++6-arm64-cross_10.2.1-6cross1 linux-libc-dev_5.10.46-2 Package versions: adduser_3.118 apt_2.2.4 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.51 bash_5.1-3+b1 binutils_2.35.2-2 binutils-aarch64-linux-gnu_2.35.2-2 binutils-common_2.35.2-2 binutils-x86-64-linux-gnu_2.35.2-2 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-aarch64-linux-gnu_10.2.1-6cross1 cpp-8_8.4.0-7 cpp-aarch64-linux-gnu_4:10.2.1-1 cross-config_2.6.18+nmu1 crossbuild-essential-arm64_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.2-2 fakeroot_1.25.3-1.1 fdisk_2.36.1-7 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-aarch64-linux-gnu_10.2.1-6cross1 g++-aarch64-linux-gnu_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-aarch64-linux-gnu_10.2.1-6cross1 gcc-10-aarch64-linux-gnu-base_10.2.1-6cross1 gcc-10-base_10.2.1-6 gcc-10-cross-base_10.2.1-6cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-1 gcc-aarch64-linux-gnu_4:10.2.1-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.2.4 libarchive-zip-perl_1.68-1 libasan5_9.4.0-1 libasan6_10.2.1-6 libasan6-arm64-cross_10.2.1-6cross1 libatomic1_10.2.1-6 libatomic1-arm64-cross_10.2.1-6cross1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2 libblkid1_2.36.1-7 libbz2-1.0_1.0.8-4 libc-bin_2.31-13 libc-dev-bin_2.31-13 libc6_2.31-13 libc6-arm64-cross_2.31-9cross4 libc6-dev_2.31-13 libc6-dev-arm64-cross_2.31-9cross4 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6 libcom-err2_1.46.2-2 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.18-4 libcrypt1_1:4.4.18-4 libctf-nobfd0_2.35.2-2 libctf0_2.35.2-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.3.4 libdebian-dpkgcross-perl_2.6.18+nmu1 libdpkg-perl_1.20.9 libelf1_0.183-3 libext2fs2_1.46.2-2 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-7 libffi6_3.2.1-9 libffi7_3.3-6 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-6 libgcc-10-dev-arm64-cross_10.2.1-6cross1 libgcc-9-dev_9.4.0-1 libgcc-s1_10.2.1-6 libgcc-s1-arm64-cross_10.2.1-6cross1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_10.2.1-6 libgomp1-arm64-cross_10.2.1-6cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.0-5 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.23-1 libitm1_10.2.1-6 libitm1-arm64-cross_10.2.1-6cross1 libk5crypto3_1.18.3-6 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-6 libkrb5support0_1.18.3-6 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.1-6 liblsan0-arm64-cross_10.2.1-6cross1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-7 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncursesw6_6.2+20201114-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-9 libpam-modules-bin_1.4.0-9 libpam-runtime_1.4.0-9 libpam0g_1.4.0-9 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libquadmath0_10.2.1-6 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libss2_1.46.2-2 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-arm64-cross_10.2.1-6cross1 libstdc++-9-dev_9.4.0-1 libstdc++6_10.2.1-6 libstdc++6-arm64-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.3-6 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 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util-linux_2.36.1-7 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: chip-seq Binary: chip-seq, chip-seq-data Architecture: any all Version: 1.5.5-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://ccg.epfl.ch//chipseq Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/chip-seq Vcs-Git: https://salsa.debian.org/med-team/chip-seq.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12) Package-List: chip-seq deb science optional arch=any chip-seq-data deb science optional arch=all Checksums-Sha1: c1d0fe6c413dbfcfc248a9ed2f49838a4b1384ac 5257567 chip-seq_1.5.5.orig.tar.gz 08d2558d0740ecc3cf754e4effad0821503c13fc 8840 chip-seq_1.5.5-3.debian.tar.xz Checksums-Sha256: ce432340e879a629001ecc4c14886e974ec3caea1b723e41f1a7a1a431a2a035 5257567 chip-seq_1.5.5.orig.tar.gz 654d5dadedc5c1fa9e46f65a6ffdc1fa1571715e80f4c1b6e5908a63047e20b1 8840 chip-seq_1.5.5-3.debian.tar.xz Files: 4e08c0558e2304415c766fa0bd3cbebd 5257567 chip-seq_1.5.5.orig.tar.gz 1c60740cc4de88131a34ce223804e7d5 8840 chip-seq_1.5.5-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6AfK0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH9pw//Q+k06DReYj+ySxxsnc8PjyhPAOXtBVJQ Wfl8dGzJBxSDbhoVk8D3U2kPnNkZ93NxJW04YE1VqyzHxWwAYRfLDd/0bR+rTnCy G72eBesSbwHq3IA2UA/aSaLJYhxHNBapKRZE4ecHRCkUqxEME3qRRhDK6t+YBzhW kFrKLcJ+E6urKBUZtVjJuvPxhVNkFf6yFsnblmXe6rSr6NmM6iDUe83yM474vL0s nabkrmIV79lSVnUKzJfmnDP9/4jlgJDiCYk6Zf4SsliTualE2QoWxHVemBODz74m BM6XEzVco47aUHrwgPIQzE1CJaPH4fbm5yfPZrIue4JjnBBCbZPjSALzi882+I0G qzE4GV7Xh+wByeN+H8BNnw3q7v1Shlhb6+rTkPHiA5Vu4oCfDuohdYGrqpyv4RM8 tR+E+MEHsZNxATRFT9Q/yK8tmhZLkwsruj1nEjTTGMK+1HSXERpkOHYw2uDh6BWj 2+MaQdMPgrpoWcf3KZNH6fjzxE4NiuEmVpnB50Y4SAnO7qiOw6sa6tEvJIFxNsOu RvKXzfqJ1kp9y60rugsFZA4xBuVAevhhNMADknkWL9jj5UWrJU7O4c+dtqcOhfZI FfMUFJY+A6AX7XdeaiOqvGCShFZ1HoxLKzxZjcQXfjOTf34D24pcOabTGTguQaJH AeXBodqO+88= =qQRt -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.T_pSEp5N/trustedkeys.kbx': General error gpgv: Signature made Sun Mar 29 10:47:09 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./chip-seq_1.5.5-3.dsc dpkg-source: info: extracting chip-seq in /<> dpkg-source: info: unpacking chip-seq_1.5.5.orig.tar.gz dpkg-source: info: unpacking chip-seq_1.5.5-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_makefile.patch dpkg-source: info: applying data_location.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-c477eba2-e614-4fcd-a392-06611365d664 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package chip-seq dpkg-buildpackage: info: source version 1.5.5-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -rf chipcor chipextract chippart chippeak chipcenter chipscore tools/compactsga tools/countsga tools/featreplace tools/filter_counts tools/bed2sga tools/bed2bed_display tools/sga2bed tools/sga2wig *.o *~ make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[1]: Entering directory '/<>' aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipcor chipcor.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipextract chipextract.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chippart chippart.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashtable.o hashtable.c hashtable.c: In function ‘MurmurHash3_x86_32’: hashtable.c:539:14: warning: this statement may fall through [-Wimplicit-fallthrough=] 539 | case 3: k1 ^= tail[2] << 16; | ~~~^~~~~~~~~~~~~~~~ hashtable.c:540:3: note: here 540 | case 2: k1 ^= tail[1] << 8; | ^~~~ hashtable.c:540:14: warning: this statement may fall through [-Wimplicit-fallthrough=] 540 | case 2: k1 ^= tail[1] << 8; | ~~~^~~~~~~~~~~~~~~ hashtable.c:541:3: note: here 541 | case 1: k1 ^= tail[0]; | ^~~~ aarch64-linux-gnu-gcc -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm -o chippeak chippeak.c hashtable.o aarch64-linux-gnu-gcc -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm -o chipcenter chipcenter.c hashtable.o aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o chipscore chipscore.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/compactsga tools/compactsga.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/countsga tools/countsga.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/featreplace tools/featreplace.c aarch64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu99 -W -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -o tools/filter_counts tools/filter_counts.c aarch64-linux-gnu-gcc -o tools/bed2sga tools/bed2sga.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm aarch64-linux-gnu-gcc -o tools/bed2bed_display tools/bed2bed_display.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm tools/bed2bed_display.c: In function ‘main’: tools/bed2bed_display.c:564:7: warning: ‘__builtin_memcpy’ writing 6 bytes into a region of size 5 [-Wstringop-overflow=] 564 | strcpy(options.visibility, "dense"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tools/bed2bed_display.c:557:31: note: at offset 0 to an object with size 5 allocated by ‘malloc’ here 557 | if ((options.visibility = malloc(5 * sizeof(char))) == NULL) { | ^~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -o tools/sga2bed tools/sga2bed.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm aarch64-linux-gnu-gcc -o tools/sga2wig tools/sga2wig.c hashtable.o -Wl,-z,relro -O3 -std=gnu99 -fPIC -lm make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>' mkdir -p /<>/debian/tmp/usr/bin mv chipcor chipextract chippart chippeak chipcenter chipscore tools/compactsga tools/countsga tools/featreplace tools/filter_counts tools/bed2sga tools/bed2bed_display tools/sga2bed tools/sga2wig /<>/debian/tmp/usr/bin cp -p tools/check_bed.pl tools/chr_replace_sga.pl tools/eland2sga.pl tools/fps2sga.pl tools/gff2sga.pl tools/partit2bed.pl tools/partit2gff.pl tools/sga2fps.pl tools/sga2gff.pl /<>/debian/tmp/usr/bin make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install for perlscript in `grep -lR '#!/usr/local/bin/perl' debian/*/usr` ; do \ sed -i '1s+#!/usr/local/bin/perl+#!/usr/bin/perl+' ${perlscript} ; \ done make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a debian/rules override_dh_installman make[1]: Entering directory '/<>' dh_installman --language=C make[1]: Leaving directory '/<>' dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package chip-seq: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package chip-seq: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'chip-seq' in '../chip-seq_1.5.5-3_arm64.deb'. dpkg-deb: building package 'chip-seq-dbgsym' in '../chip-seq-dbgsym_1.5.5-3_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../chip-seq_1.5.5-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-07-27T10:37:02Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ chip-seq_1.5.5-3_arm64.changes: ------------------------------- Format: 1.8 Date: Sun, 29 Mar 2020 12:44:42 +0200 Source: chip-seq Binary: chip-seq chip-seq-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.5.5-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: chip-seq - tools performing common ChIP-Seq data analysis tasks Changes: chip-seq (1.5.5-3) unstable; urgency=medium . * Fix arch only build Checksums-Sha1: 6ce37b91c7841bfe536e2b41b799be2d58b9e7c2 118172 chip-seq-dbgsym_1.5.5-3_arm64.deb b2b9f310930f8ca9e810fc95d9f186a2e0c516b4 4796 chip-seq_1.5.5-3_arm64.buildinfo 27535a2d6415fbf767d85af541cdc38752929b1b 98668 chip-seq_1.5.5-3_arm64.deb Checksums-Sha256: 088fe9db2984faaf5972e1234a62970b5b5056e58c6f66b841695796c8570afa 118172 chip-seq-dbgsym_1.5.5-3_arm64.deb eb762f11f015cfea621b3d27e02185ffa2f3b5bf1b2ac4d0b05c1796eb365004 4796 chip-seq_1.5.5-3_arm64.buildinfo 2b1f0d5241814f755bce805f86a41b87639182e6b1028ba93804d4cb9ef96019 98668 chip-seq_1.5.5-3_arm64.deb Files: a0f1dbc203e8be36e6e49ea2af9a7ad4 118172 debug optional chip-seq-dbgsym_1.5.5-3_arm64.deb f4c0fb2101fff24d6318285b1141ee72 4796 science optional chip-seq_1.5.5-3_arm64.buildinfo 658ba7a3872ebe9ebdf1b942edd6ad59 98668 science optional chip-seq_1.5.5-3_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: chip-seq Binary: chip-seq chip-seq-dbgsym Architecture: arm64 Version: 1.5.5-3 Checksums-Md5: a0f1dbc203e8be36e6e49ea2af9a7ad4 118172 chip-seq-dbgsym_1.5.5-3_arm64.deb 658ba7a3872ebe9ebdf1b942edd6ad59 98668 chip-seq_1.5.5-3_arm64.deb Checksums-Sha1: 6ce37b91c7841bfe536e2b41b799be2d58b9e7c2 118172 chip-seq-dbgsym_1.5.5-3_arm64.deb 27535a2d6415fbf767d85af541cdc38752929b1b 98668 chip-seq_1.5.5-3_arm64.deb Checksums-Sha256: 088fe9db2984faaf5972e1234a62970b5b5056e58c6f66b841695796c8570afa 118172 chip-seq-dbgsym_1.5.5-3_arm64.deb 2b1f0d5241814f755bce805f86a41b87639182e6b1028ba93804d4cb9ef96019 98668 chip-seq_1.5.5-3_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 27 Jul 2021 10:37:01 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 11.1), base-passwd (= 3.5.51), bash (= 5.1-3+b1), binutils (= 2.35.2-2), binutils-common (= 2.35.2-2), binutils-x86-64-linux-gnu (= 2.35.2-2), bsdextrautils (= 2.36.1-7), bsdutils (= 1:2.36.1-7), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.2.1-6), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.77), debhelper (= 13.3.4), debianutils (= 4.11.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.2.1-6), gcc (= 4:10.2.1-1), gcc-10 (= 10.2.1-6), gcc-10-base (= 10.2.1-6), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.6-1), groff-base (= 1.22.4-6), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.1-6), libatomic1 (= 10.2.1-6), libattr1 (= 1:2.4.48-6), libaudit-common (= 1:3.0-2), libaudit1 (= 1:3.0-2), libbinutils (= 2.35.2-2), libblkid1 (= 2.36.1-7), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-13), libc-dev-bin (= 2.31-13), libc6 (= 2.31-13), libc6-dev (= 2.31-13), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.1-6), libcom-err2 (= 1.46.2-2), libcrypt-dev (= 1:4.4.18-4), libcrypt1 (= 1:4.4.18-4), libctf-nobfd0 (= 2.35.2-2), libctf0 (= 2.35.2-2), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.260), libdebhelper-perl (= 13.3.4), libdpkg-perl (= 1.20.9), libelf1 (= 0.183-3), libfile-stripnondeterminism-perl (= 1.12.0-1), libgcc-10-dev (= 10.2.1-6), libgcc-s1 (= 10.2.1-6), libgcrypt20 (= 1.8.7-6), libgdbm-compat4 (= 1.19-2), libgdbm6 (= 1.19-2), libgmp10 (= 2:6.2.1+dfsg-1), libgomp1 (= 10.2.1-6), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-6), libicu67 (= 67.1-7), libisl23 (= 0.23-1), libitm1 (= 10.2.1-6), libk5crypto3 (= 1.18.3-6), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-6), libkrb5support0 (= 1.18.3-6), liblsan0 (= 10.2.1-6), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-7), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-9), libpam-modules-bin (= 1.4.0-9), libpam-runtime (= 1.4.0-9), libpam0g (= 1.4.0-9), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-4), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.1-6), libseccomp2 (= 2.5.1-1), libselinux1 (= 3.1-3), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.36.1-7), libssl1.1 (= 1.1.1k-1), libstdc++-10-dev (= 10.2.1-6), libstdc++6 (= 10.2.1-6), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.3-6), libtinfo6 (= 6.2+20201114-2), libtirpc-common (= 1.3.1-1), libtirpc-dev (= 1.3.1-1), libtirpc3 (= 1.3.1-1), libtool (= 2.4.6-15), libtsan0 (= 10.2.1-6), libubsan1 (= 10.2.1-6), libuchardet0 (= 0.0.7-1), libudev1 (= 247.3-6), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-7), libxml2 (= 2.9.10+dfsg-6.7), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.10.46-2), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), patch (= 2.7.6-7), perl (= 5.32.1-4), perl-base (= 5.32.1-4), perl-modules-5.32 (= 5.32.1-4), po-debconf (= 1.0.21+nmu1), sed (= 4.7-1), sensible-utils (= 0.0.14), sysvinit-utils (= 2.96-7), tar (= 1.34+dfsg-1), util-linux (= 2.36.1-7), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1585478682" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ chip-seq-dbgsym_1.5.5-3_arm64.deb --------------------------------- new Debian package, version 2.0. size 118172 bytes: control archive=1232 bytes. 907 bytes, 12 lines control 1570 bytes, 15 lines md5sums Package: chip-seq-dbgsym Source: chip-seq Version: 1.5.5-3 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 273 Depends: chip-seq (= 1.5.5-3) Section: debug Priority: optional Description: debug symbols for chip-seq Build-Ids: 0152f3dce91b4fcb0da1aabfe6d2935056f467c9 33df1a6731bf27367eeed3d9687b320e849c3df8 56f761b8cc7ba8998b4a9a7dec595790b7dd88ba 638b8c065b8649979b2b4a19cb8f8ab21a4ba665 779b5ff51571081763bd01b74b5af89b4053a77b 86916f39034c006f9937c2a9660c354b7bae1c3e 99d7be98b638b07cfeee0f20d7d2a45cc86184a0 a6046596a560c3de64eee0e054472a5392289ccc ab8438c2c1ccbf5871d8052a9bee1b7c98440c15 e01641cb517492a7f7e16447e14f702c8c21eefd e03db275b5feb9742b99471e75925c8d51ea3b90 e3fdd444779bb78831537714878f0e42be5b634a eb5a2fa9db11f00d3b034696469e1442a395dfe9 f030e465b3c9bfd27cf6f9894bb895921559efd9 drwxr-xr-x root/root 0 2020-03-29 10:44 ./ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/01/ -rw-r--r-- root/root 12424 2020-03-29 10:44 ./usr/lib/debug/.build-id/01/52f3dce91b4fcb0da1aabfe6d2935056f467c9.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/33/ -rw-r--r-- root/root 16640 2020-03-29 10:44 ./usr/lib/debug/.build-id/33/df1a6731bf27367eeed3d9687b320e849c3df8.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/56/ -rw-r--r-- root/root 39736 2020-03-29 10:44 ./usr/lib/debug/.build-id/56/f761b8cc7ba8998b4a9a7dec595790b7dd88ba.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/63/ -rw-r--r-- root/root 16664 2020-03-29 10:44 ./usr/lib/debug/.build-id/63/8b8c065b8649979b2b4a19cb8f8ab21a4ba665.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/77/ -rw-r--r-- root/root 18280 2020-03-29 10:44 ./usr/lib/debug/.build-id/77/9b5ff51571081763bd01b74b5af89b4053a77b.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/86/ -rw-r--r-- root/root 17224 2020-03-29 10:44 ./usr/lib/debug/.build-id/86/916f39034c006f9937c2a9660c354b7bae1c3e.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/99/ -rw-r--r-- root/root 19064 2020-03-29 10:44 ./usr/lib/debug/.build-id/99/d7be98b638b07cfeee0f20d7d2a45cc86184a0.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.build-id/a6/ -rw-r--r-- root/root 17176 2020-03-29 10:44 ./usr/lib/debug/.build-id/a6/046596a560c3de64eee0e054472a5392289ccc.debug drwxr-xr-x root/root 0 2020-03-29 10:44 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./usr/lib/debug/.build-id/f0/30e465b3c9bfd27cf6f9894bb895921559efd9.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 3872 2020-03-29 10:44 ./usr/lib/debug/.dwz/aarch64-linux-gnu/chip-seq.debug drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq-dbgsym -> chip-seq chip-seq_1.5.5-3_arm64.deb -------------------------- new Debian package, version 2.0. size 98668 bytes: control archive=2220 bytes. 1369 bytes, 29 lines control 2826 bytes, 46 lines md5sums Package: chip-seq Version: 1.5.5-3 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 452 Depends: libc6 (>= 2.17), chip-seq-data, libmath-round-perl Section: science Priority: optional Homepage: https://ccg.epfl.ch//chipseq Description: tools performing common ChIP-Seq data analysis tasks The ChIP-Seq software provides a set of tools performing common genome- wide ChIP- seq analysis tasks, including positional correlation analysis, peak detection, and genome partitioning into signal-rich and signal-poor regions. These tools exist as stand-alone C programs and perform the following tasks: . 1. Positional correlation analysis and generation of an aggregation plot (AP) (chipcor), 2. Extraction of specific genome annotation features around reference anchor points (chipextract), 3. Read centering or shifting (chipcenter), 4. Narrow peak caller using a fixed width peak size (chippeak), 5. Broad peak caller used for large regions of enrichment (chippart), 6. Feature selection tool based on a read count threshold (chipscore). . Because the ChIP-Seq tools are primarily optimized for speed, they use their own compact format for ChIP-seq data representation called SGA (Simplified Genome Annotation). SGA is a line-oriented, tab-delimited plain text format. drwxr-xr-x root/root 0 2020-03-29 10:44 ./ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/bin/ -rwxr-xr-x root/root 23392 2020-03-29 10:44 ./usr/bin/bed2bed_display -rwxr-xr-x root/root 31576 2020-03-29 10:44 ./usr/bin/bed2sga -rwxr-xr-x root/root 1721 2020-03-29 10:44 ./usr/bin/check_bed.pl -rwxr-xr-x root/root 27024 2020-03-29 10:44 ./usr/bin/chipcenter -rwxr-xr-x root/root 27064 2020-03-29 10:44 ./usr/bin/chipcor -rwxr-xr-x root/root 47504 2020-03-29 10:44 ./usr/bin/chipextract -rwxr-xr-x root/root 22936 2020-03-29 10:44 ./usr/bin/chippart -rwxr-xr-x root/root 31152 2020-03-29 10:44 ./usr/bin/chippeak -rwxr-xr-x root/root 22944 2020-03-29 10:44 ./usr/bin/chipscore -rwxr-xr-x root/root 920 2020-03-29 10:44 ./usr/bin/chr_replace_sga.pl -rwxr-xr-x root/root 10560 2020-03-29 10:44 ./usr/bin/compactsga -rwxr-xr-x root/root 14696 2020-03-29 10:44 ./usr/bin/countsga -rwxr-xr-x root/root 4397 2020-03-29 10:44 ./usr/bin/eland2sga.pl -rwxr-xr-x root/root 14680 2020-03-29 10:44 ./usr/bin/featreplace -rwxr-xr-x root/root 14680 2020-03-29 10:44 ./usr/bin/filter_counts -rwxr-xr-x root/root 3005 2015-12-10 14:18 ./usr/bin/fps2sga.pl -rwxr-xr-x root/root 19480 2020-03-29 10:44 ./usr/bin/gff2sga.pl -rwxr-xr-x root/root 9591 2020-03-29 10:44 ./usr/bin/partit2bed.pl -rwxr-xr-x root/root 1512 2020-03-29 10:44 ./usr/bin/partit2gff.pl -rwxr-xr-x root/root 31584 2020-03-29 10:44 ./usr/bin/sga2bed -rwxr-xr-x root/root 4910 2020-03-29 10:44 ./usr/bin/sga2fps.pl -rwxr-xr-x root/root 10560 2020-03-29 10:44 ./usr/bin/sga2gff.pl -rwxr-xr-x root/root 31800 2020-03-29 10:44 ./usr/bin/sga2wig drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq/ -rw-r--r-- root/root 286 2020-03-29 10:44 ./usr/share/doc/chip-seq/changelog.Debian.gz -rw-r--r-- root/root 1111 2020-03-29 10:44 ./usr/share/doc/chip-seq/copyright drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/doc/chip-seq/examples/ -rw-r--r-- root/root 462 2020-03-29 10:44 ./usr/share/doc/chip-seq/examples/H3K4me3.sga drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 117 2020-03-29 10:44 ./usr/share/lintian/overrides/chip-seq drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/man/ drwxr-xr-x root/root 0 2020-03-29 10:44 ./usr/share/man/man1/ -rw-r--r-- root/root 918 2020-03-29 10:44 ./usr/share/man/man1/bed2bed_display.1.gz -rw-r--r-- root/root 839 2020-03-29 10:44 ./usr/share/man/man1/bed2sga.1.gz -rw-r--r-- root/root 883 2020-03-29 10:44 ./usr/share/man/man1/chipcenter.1.gz -rw-r--r-- root/root 1287 2020-03-29 10:44 ./usr/share/man/man1/chipcor.1.gz -rw-r--r-- root/root 1154 2020-03-29 10:44 ./usr/share/man/man1/chipextract.1.gz -rw-r--r-- root/root 1193 2020-03-29 10:44 ./usr/share/man/man1/chippart.1.gz -rw-r--r-- root/root 1206 2020-03-29 10:44 ./usr/share/man/man1/chippeak.1.gz -rw-r--r-- root/root 1178 2020-03-29 10:44 ./usr/share/man/man1/chipscore.1.gz -rw-r--r-- root/root 463 2020-03-29 10:44 ./usr/share/man/man1/compactsga.1.gz -rw-r--r-- root/root 628 2020-03-29 10:44 ./usr/share/man/man1/countsga.1.gz -rw-r--r-- root/root 508 2020-03-29 10:44 ./usr/share/man/man1/featreplace.1.gz -rw-r--r-- root/root 616 2020-03-29 10:44 ./usr/share/man/man1/filter_counts.1.gz -rw-r--r-- root/root 502 2020-03-29 10:44 ./usr/share/man/man1/fps2sga.pl.1.gz -rw-r--r-- root/root 524 2020-03-29 10:44 ./usr/share/man/man1/gff2sga.pl.1.gz -rw-r--r-- root/root 589 2020-03-29 10:44 ./usr/share/man/man1/partit2bed.pl.1.gz -rw-r--r-- root/root 936 2020-03-29 10:44 ./usr/share/man/man1/sga2bed.1.gz -rw-r--r-- root/root 503 2020-03-29 10:44 ./usr/share/man/man1/sga2fps.pl.1.gz -rw-r--r-- root/root 494 2020-03-29 10:44 ./usr/share/man/man1/sga2gff.pl.1.gz -rw-r--r-- root/root 1433 2020-03-29 10:44 ./usr/share/man/man1/sga2wig.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [534 B] Get:5 copy:/<>/apt_archive ./ Packages [617 B] Fetched 2114 B in 0s (89.6 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded. Need to get 7624 kB of archives. After this operation, 21.7 MB of additional disk space will be used. 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libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1+b1 [13.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012002-1 [351 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-3 [88.5 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7624 kB in 0s (33.0 MB/s) Selecting previously unselected package readline-common. 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Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-13) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 23364 Build-Time: 16 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 38 Job: chip-seq_1.5.5-3 Lintian: pass Machine Architecture: amd64 Package: chip-seq Package-Time: 66 Source-Version: 1.5.5-3 Space: 23364 Status: successful Version: 1.5.5-3 -------------------------------------------------------------------------------- Finished at 2021-07-27T10:37:02Z Build needed 00:01:06, 23364k disk space