sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | clonalframeml 1.12-3 (armel) Sun, 27 Aug 2023 16:02:17 +0000 | +==============================================================================+ Package: clonalframeml Version: 1.12-3 Source Version: 1.12-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-6183c480-0e7d-4066-b6c8-a4917914b02a' with '<>' I: NOTICE: Log filtering will replace 'build/clonalframeml-b0V11c/resolver-zoBUAS' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [210 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-08-27-1422.24-F-2023-08-27-0204.51.pdiff [68.2 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-08-27-1422.24-F-2023-08-27-0204.51.pdiff [82.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-08-27-1422.24-F-2023-08-27-0204.51.pdiff [68.2 kB] Get:6 http://localhost:3142/debian sid/main armel Packages [9060 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-08-27-1422.24-F-2023-08-27-0204.51.pdiff [82.6 kB] Fetched 9548 kB in 3s (3735 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: usrmerge 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 13.2 kB of archives. After this operation, 2048 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 usrmerge all 36 [13.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.2 kB in 0s (0 B/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14527 files and directories currently installed.) Preparing to unpack .../archives/usrmerge_36_all.deb ... Unpacking usrmerge (36) over (35) ... Setting up usrmerge (36) ... removed '/lib32' rmdir: removing directory, '/usr/lib32' removed '/libx32' rmdir: removing directory, '/usr/libx32' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'clonalframeml' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/clonalframeml.git Please use: git clone https://salsa.debian.org/med-team/clonalframeml.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 107 kB of source archives. Get:1 http://localhost:3142/debian sid/main clonalframeml 1.12-3 (dsc) [1996 B] Get:2 http://localhost:3142/debian sid/main clonalframeml 1.12-3 (tar) [101 kB] Get:3 http://localhost:3142/debian sid/main clonalframeml 1.12-3 (diff) [4400 B] Fetched 107 kB in 1s (117 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/clonalframeml-b0V11c/clonalframeml-1.12' with '<>' I: NOTICE: Log filtering will replace 'build/clonalframeml-b0V11c' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [714 B] Get:5 copy:/<>/apt_archive ./ Packages [757 B] Fetched 2080 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-13-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-13-arm-linux-gnueabi gcc-13-arm-linux-gnueabi-base gcc-13-base:armel gcc-13-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-13-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-13-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel krb5-doc:armel krb5-user:armel libstdc++-11-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl krb5-locales:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-13-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-13-arm-linux-gnueabi gcc-13-arm-linux-gnueabi-base gcc-13-base:armel gcc-13-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-13-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-13-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 86.2 MB of archives. After this operation, 334 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-2 [1176 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-1 [88.7 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-3 [1386 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.41-4 [3242 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabi-base amd64 13.2.0-2cross1 [39.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-13-arm-linux-gnueabi amd64 13.2.0-2cross1 [9271 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:13.2.0-1 [4120 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.37-3cross1 [883 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 13.2.0-2cross1 [38.4 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 13.2.0-2cross1 [105 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 13.2.0-2cross1 [9112 B] Get:29 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 13.2.0-2cross1 [2382 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 13.2.0-2cross1 [533 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 13.2.0-2cross1 [966 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-armel-cross all 13.2.0-2cross1 [773 kB] Get:33 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabi amd64 13.2.0-2cross1 [18.2 MB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:13.2.0-1 [1468 B] Get:35 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armel-cross all 6.3.7-1cross1 [1878 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.37-3cross1 [1290 kB] Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-armel-cross all 13.2.0-2cross1 [2208 kB] Get:38 http://localhost:3142/debian sid/main amd64 g++-13-arm-linux-gnueabi amd64 13.2.0-2cross1 [10.2 MB] Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:13.2.0-1 [1176 B] Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:42 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.10 [3484 B] Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.5 [81.8 kB] Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:63 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13 [1300 kB] Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.5 [952 kB] Get:69 http://localhost:3142/debian sid/main armel gcc-11-base armel 11.4.0-2 [39.2 kB] Get:70 http://localhost:3142/debian sid/main armel gcc-13-base armel 13.2.0-2 [39.3 kB] Get:71 http://localhost:3142/debian sid/main armel libgcc-s1 armel 13.2.0-2 [38.3 kB] Get:72 http://localhost:3142/debian sid/main armel libc6 armel 2.37-7 [2132 kB] Get:73 http://localhost:3142/debian sid/main armel libasan6 armel 11.4.0-2 [1944 kB] Get:74 http://localhost:3142/debian sid/main armel libatomic1 armel 13.2.0-2 [9400 B] Get:75 http://localhost:3142/debian sid/main armel linux-libc-dev armel 6.4.11-1 [1783 kB] Get:76 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.36-2 [96.7 kB] Get:77 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.36-2 [126 kB] Get:78 http://localhost:3142/debian sid/main armel libcom-err2 armel 1.47.0-2 [19.1 kB] Get:79 http://localhost:3142/debian sid/main armel libkrb5support0 armel 1.20.1-3 [29.4 kB] Get:80 http://localhost:3142/debian sid/main armel libk5crypto3 armel 1.20.1-3 [73.7 kB] Get:81 http://localhost:3142/debian sid/main armel libkeyutils1 armel 1.6.3-2 [7864 B] Get:82 http://localhost:3142/debian sid/main armel libssl3 armel 3.0.10-1 [1627 kB] Get:83 http://localhost:3142/debian sid/main armel libkrb5-3 armel 1.20.1-3 [284 kB] Get:84 http://localhost:3142/debian sid/main armel libgssapi-krb5-2 armel 1.20.1-3 [110 kB] Get:85 http://localhost:3142/debian sid/main armel libtirpc3 armel 1.3.3+ds-1 [72.0 kB] Get:86 http://localhost:3142/debian sid/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:87 http://localhost:3142/debian sid/main armel libtirpc-dev armel 1.3.3+ds-1 [182 kB] Get:88 http://localhost:3142/debian sid/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:89 http://localhost:3142/debian sid/main armel libc6-dev armel 2.37-7 [1293 kB] Get:90 http://localhost:3142/debian sid/main armel libgomp1 armel 13.2.0-2 [108 kB] Get:91 http://localhost:3142/debian sid/main armel libstdc++6 armel 13.2.0-2 [581 kB] Get:92 http://localhost:3142/debian sid/main armel libubsan1 armel 13.2.0-2 [966 kB] Get:93 http://localhost:3142/debian sid/main armel libgcc-11-dev armel 11.4.0-2 [705 kB] Get:94 http://localhost:3142/debian sid/main armel libstdc++-11-dev armel 11.4.0-2 [1983 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 86.2 MB in 0s (181 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14527 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-13_amd64.deb ... Unpacking gettext-base (0.21-13) ... 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Setting up libdebhelper-perl (13.11.5) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up linux-libc-dev:armel (6.4.11-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-13) ... Setting up m4 (1.4.19-3) ... Setting up gcc-13-arm-linux-gnueabi-base:amd64 (13.2.0-2cross1) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up linux-libc-dev-armel-cross (6.3.7-1cross1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:armel (13.2.0-2) ... Setting up gcc-13-cross-base (13.2.0-2cross1) ... Setting up autopoint (0.21-13) ... Setting up autoconf (2.71-3) ... Setting up libc6-armel-cross (2.37-3cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libc6-dev-armel-cross (2.37-3cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:amd64 (0.189-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13) ... Setting up cpp-13-arm-linux-gnueabi (13.2.0-2cross1) ... Setting up libgomp1-armel-cross (13.2.0-2cross1) ... Setting up libtool (2.4.7-7) ... Setting up libgcc-s1-armel-cross (13.2.0-2cross1) ... Setting up libstdc++6-armel-cross (13.2.0-2cross1) ... Setting up libatomic1-armel-cross (13.2.0-2cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-arm-linux-gnueabi (4:13.2.0-1) ... Setting up libubsan1-armel-cross (13.2.0-2cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-2) ... Setting up libasan8-armel-cross (13.2.0-2cross1) ... Setting up libgcc-13-dev-armel-cross (13.2.0-2cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up gcc-13-arm-linux-gnueabi (13.2.0-2cross1) ... Setting up man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-13-dev-armel-cross (13.2.0-2cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:13.2.0-1) ... Setting up g++-13-arm-linux-gnueabi (13.2.0-2cross1) ... Setting up debhelper (13.11.5) ... Setting up g++-arm-linux-gnueabi (4:13.2.0-1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-armel (12.10) ... Setting up libgcc-s1:armel (13.2.0-2) ... Setting up libc6:armel (2.37-7) ... Setting up libstdc++6:armel (13.2.0-2) ... Setting up libkeyutils1:armel (1.6.3-2) ... Setting up libcrypt1:armel (1:4.4.36-2) ... Setting up libcom-err2:armel (1.47.0-2) ... Setting up libgomp1:armel (13.2.0-2) ... Setting up libasan6:armel (11.4.0-2) ... Setting up libkrb5support0:armel (1.20.1-3) ... Setting up libatomic1:armel (13.2.0-2) ... Setting up libk5crypto3:armel (1.20.1-3) ... Setting up libubsan1:armel (13.2.0-2) ... Setting up libgcc-11-dev:armel (11.4.0-2) ... Setting up libcrypt-dev:armel (1:4.4.36-2) ... Setting up libssl3:armel (3.0.10-1) ... Setting up libkrb5-3:armel (1.20.1-3) ... Setting up libgssapi-krb5-2:armel (1.20.1-3) ... Setting up libtirpc3:armel (1.3.3+ds-1) ... Setting up libtirpc-dev:armel (1.3.3+ds-1) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libc6-dev:armel (2.37-7) ... Setting up libstdc++-11-dev:armel (11.4.0-2) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.37-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-9-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) amd64 (x86_64) Toolchain package versions: binutils_2.41-4 dpkg-dev_1.21.22 g++-11_11.4.0-2 g++-13_13.2.0-2 gcc-11_11.4.0-2 gcc-13_13.2.0-2 libc6-dev_2.37-7 libstdc++-11-dev_11.4.0-2 libstdc++-13-dev_13.2.0-2 libstdc++-13-dev-armel-cross_13.2.0-2cross1 libstdc++6_13.2.0-2 libstdc++6-armel-cross_13.2.0-2cross1 linux-libc-dev_6.4.11-1 Package versions: adduser_3.137 apt_2.7.3 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b4 binutils_2.41-4 binutils-arm-linux-gnueabi_2.41-4 binutils-common_2.41-4 binutils-x86-64-linux-gnu_2.41-4 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-11_11.4.0-2 cpp-13_13.2.0-2 cpp-13-arm-linux-gnueabi_13.2.0-2cross1 cpp-arm-linux-gnueabi_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-armel_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.5 debian-archive-keyring_2023.4 debianutils_5.8-1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.22 dpkg-cross_2.6.20 dpkg-dev_1.21.22 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.44-3 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-2 g++-13_13.2.0-2 g++-13-arm-linux-gnueabi_13.2.0-2cross1 g++-arm-linux-gnueabi_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-2 gcc-11-base_11.4.0-2 gcc-12-base_12.3.0-8 gcc-13_13.2.0-2 gcc-13-arm-linux-gnueabi_13.2.0-2cross1 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util-linux-extra_2.39.2-1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: clonalframeml Binary: clonalframeml Architecture: any Version: 1.12-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/xavierdidelot/ClonalFrameML Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/clonalframeml Vcs-Git: https://salsa.debian.org/med-team/clonalframeml.git Build-Depends: debhelper-compat (= 13) Package-List: clonalframeml deb science optional arch=any Checksums-Sha1: 08afc8f94272cc06876ab26ac9b2a97c225ffc7d 100944 clonalframeml_1.12.orig.tar.gz 369b549fea4e5408ce209984e6db5e5b0b5b2828 4400 clonalframeml_1.12-3.debian.tar.xz Checksums-Sha256: ef76705c1a0f1343184f956cd0bdc96c2cfdbb998177330b09b6df84c74c2de6 100944 clonalframeml_1.12.orig.tar.gz a13fcb48266c17ca297d0ca386def8bea5bafaf5cf88794a67dc576ac5079226 4400 clonalframeml_1.12-3.debian.tar.xz Files: d4349135906a126b5f1c723d20ad6189 100944 clonalframeml_1.12.orig.tar.gz c71ecf80e6ab06b8612409ed3f006e97 4400 clonalframeml_1.12-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmNhdTMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFw6RAAmVCWw5Fe4kEQcNZAVow97s48/P9EWXDP 5jYIsOatg2ggDqsCaUKkulAyd349X3TR016KxF1ALUDujHpVabNx4QOof9b0GEqa jDrleeHq8MaIDAXCBrS/2ThRjJjIohiY2VUEdoIBpCe+MYlNgz1bbEUujv5GXcDA tDgT1T2Vb5QqTigWl457m2QSgqRTUsds9q5BFaWEbVBfuA28gFBObBpxV446+p0Y W6ONBYQOW6bIvQr/LQO1vh8anPaiDpiYAcNUS9DzOCWrIGov3B4Z/B6fYmqlLsIf s88raEN+jUCDGVTxlL2JMSdQ6LuWLq8E9l9XHw8p7m0zVocLmh78toQvcMDkJglo oAoIzmWGU/f5nDGmlfy7Ixu4hwuCiqFgcIoiBrvdk4/s/lMAcSH11sMk9mRiaeyh Wth0vBj/gThIP1VgdhamwP3vTSp8WJfLWx/po++vTZ/EEvSLXsFKR3aXeenkztvp D0opFVbZee/Q9FhrbXYL553yXKHjaMLrvOEJ277B/gZV8BvOz/Yrjbfh68jrtmOL Zzgybc/dZQGY0RMEcTmtxyMYhCAoMns9fY45ksWah7FMOrSoqLl3s82ZmxmcnUbq waA6BSuy6/hq830VDV2r0woTH2hJ+DtLN5kGZExoj5LGRZrDv2KwRdc1rw9i3eVl 5vMbkjSFw8I= =SGBk -----END PGP SIGNATURE----- gpgv: Signature made Tue Nov 1 19:36:19 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./clonalframeml_1.12-3.dsc: no acceptable signature found dpkg-source: info: extracting clonalframeml in /<> dpkg-source: info: unpacking clonalframeml_1.12.orig.tar.gz dpkg-source: info: unpacking clonalframeml_1.12-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-6183c480-0e7d-4066-b6c8-a4917914b02a SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package clonalframeml dpkg-buildpackage: info: source version 1.12-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src cd src && make -j1 clean make[1]: Entering directory '/<>/src' rm -f main.o make[1]: Leaving directory '/<>/src' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src debian/rules override_dh_auto_build make[1]: Entering directory '/<>' # upstream is querying Git for a revision which is not possible here # that's why we are using the Debian revision echo '#define ClonalFrameML_GITRevision "v1.12-3"' > src/version.h dh_auto_build cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabi-pkg-config CXX=arm-linux-gnueabi-g\+\+ CC=arm-linux-gnueabi-gcc make[2]: Entering directory '/<>/src' arm-linux-gnueabi-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c -o main.o main.cpp In file included from main.cpp:19: main.h:80:57: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 80 | class orderNewickNodesByStatusLabelAndAge : public std::binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/13/string:49, from /usr/arm-linux-gnueabi/include/c++/13/bits/locale_classes.h:40, from /usr/arm-linux-gnueabi/include/c++/13/bits/ios_base.h:41, from /usr/arm-linux-gnueabi/include/c++/13/ios:44, from /usr/arm-linux-gnueabi/include/c++/13/ostream:40, from /usr/arm-linux-gnueabi/include/c++/13/iostream:41, from main.h:21: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/13/vector:72, from myutils/newick.h:11, from main.h:23: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector ClonalFrameBaumWelch::maximize_likelihood(const std::vector&)’ at main.h:219:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector ClonalFrameBaumWelch::maximize_likelihood(const std::vector&)’ at main.h:220:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector ClonalFrameBaumWelch::maximize_likelihood(const std::vector&)’ at main.h:221:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘std::vector ClonalFrameBaumWelch::maximize_likelihood(const std::vector&)’ at main.h:239:24: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘ClonalFrameBaumWelch::ClonalFrameBaumWelch(const marginal_tree&, const myutils::Matrix&, const std::vector&, const std::vector&, double, const std::vector&, std::vector >&, const std::vector&, const std::vector&, int, bool, bool)’ at main.h:191:27: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘ClonalFrameBaumWelchRhoPerBranch::ClonalFrameBaumWelchRhoPerBranch(const marginal_tree&, const myutils::Matrix&, const std::vector&, const std::vector&, double, const std::vector&, std::vector >&, const std::vector&, const std::vector&, int, bool, bool)’ at main.h:309:27: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void ClonalFrameBaumWelchRhoPerBranch::maximize_likelihood(const std::vector&)’ at main.h:335:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void ClonalFrameBaumWelchRhoPerBranch::maximize_likelihood(const std::vector&)’ at main.h:337:23: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void ClonalFrameBaumWelchRhoPerBranch::maximize_likelihood(const std::vector&)’ at main.h:338:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void ClonalFrameBaumWelchRhoPerBranch::maximize_likelihood(const std::vector&)’ at main.h:340:23: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘myutils::RTRV myutils::ArgumentWizard::function_get_vector(T, std::string&) [with T = double]’ at myutils/argumentwizard.h:199:18, inlined from ‘void myutils::ArgumentWizard::read_data(std::string&)’ at myutils/argumentwizard.h:231:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘marginal_tree convert_unrooted_NewickTree_to_marginal_tree(myutils::NewickTree&, std::vector >&, std::vector >&)’ at main.cpp:847:25: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘marginal_tree convert_rooted_NewickTree_to_marginal_tree(myutils::NewickTree&, std::vector >&, std::vector >&)’ at main.cpp:667:25: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, const char**)’ at main.cpp:165:23: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, const char**)’ at main.cpp:175:21: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, const char**)’ at main.cpp:189:28: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, const char**)’ at main.cpp:236:24: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wl,-z,relro -Wl,-z,now -o ClonalFrameML main.o make[2]: Leaving directory '/<>/src' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=src" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src dh_auto_install --destdir=debian/clonalframeml/ -a -O--sourcedirectory=src dh_install -a -O--sourcedirectory=src dh_installdocs -a -O--sourcedirectory=src dh_installchangelogs -a -O--sourcedirectory=src dh_installman -a -O--sourcedirectory=src dh_installsystemduser -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dpkg-shlibdeps: warning: debian/clonalframeml/usr/bin/ClonalFrameML contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src dpkg-deb: building package 'clonalframeml' in '../clonalframeml_1.12-3_armel.deb'. dpkg-deb: building package 'clonalframeml-dbgsym' in '../clonalframeml-dbgsym_1.12-3_armel.deb'. dpkg-genbuildinfo --build=any -O../clonalframeml_1.12-3_armel.buildinfo dpkg-genchanges --build=any -O../clonalframeml_1.12-3_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-08-27T16:02:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ clonalframeml_1.12-3_armel.changes: ----------------------------------- Format: 1.8 Date: Tue, 01 Nov 2022 20:09:07 +0100 Source: clonalframeml Binary: clonalframeml clonalframeml-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 1.12-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: clonalframeml - Efficient Inference of Recombination in Whole Bacterial Genomes Changes: clonalframeml (1.12-3) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: b15b239ed7e08f191daac52354a208c102c9a476 885240 clonalframeml-dbgsym_1.12-3_armel.deb b546597e1d400aca78a08d648b288d819ae5479a 5275 clonalframeml_1.12-3_armel.buildinfo fb25acd928222096c21da8b9803fbf06889d2db8 91300 clonalframeml_1.12-3_armel.deb Checksums-Sha256: 892d606b87c215c6a978232415c25bf0e5fc3c075717c71bdf0b33521490f54c 885240 clonalframeml-dbgsym_1.12-3_armel.deb d222a874c4be60c0200ba2879630de81e08362c64b1839ff90aa763793bb64db 5275 clonalframeml_1.12-3_armel.buildinfo 43362c361faf127525eda72b0f1477b2cefcdfaee0b171f6796e3ee1e19d3535 91300 clonalframeml_1.12-3_armel.deb Files: d1b32f0d907a80c20264e5309a51e1c2 885240 debug optional clonalframeml-dbgsym_1.12-3_armel.deb be69914717f0475d123b441b2a7c8d76 5275 science optional clonalframeml_1.12-3_armel.buildinfo c968163e1e8efbe369c44d7410e02ab0 91300 science optional clonalframeml_1.12-3_armel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: clonalframeml Binary: clonalframeml clonalframeml-dbgsym Architecture: armel Version: 1.12-3 Checksums-Md5: d1b32f0d907a80c20264e5309a51e1c2 885240 clonalframeml-dbgsym_1.12-3_armel.deb c968163e1e8efbe369c44d7410e02ab0 91300 clonalframeml_1.12-3_armel.deb Checksums-Sha1: b15b239ed7e08f191daac52354a208c102c9a476 885240 clonalframeml-dbgsym_1.12-3_armel.deb fb25acd928222096c21da8b9803fbf06889d2db8 91300 clonalframeml_1.12-3_armel.deb Checksums-Sha256: 892d606b87c215c6a978232415c25bf0e5fc3c075717c71bdf0b33521490f54c 885240 clonalframeml-dbgsym_1.12-3_armel.deb 43362c361faf127525eda72b0f1477b2cefcdfaee0b171f6796e3ee1e19d3535 91300 clonalframeml_1.12-3_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 27 Aug 2023 16:02:55 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.1), bash (= 5.2.15-2+b4), binutils (= 2.41-4), binutils-common (= 2.41-4), binutils-x86-64-linux-gnu (= 2.41-4), bsdextrautils (= 2.39.2-1), bsdutils (= 1:2.39.2-1), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-2), cpp-13 (= 13.2.0-2), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.5), debianutils (= 5.8-1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.22), dpkg-dev (= 1.21.22), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-2), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-2), gcc-11-base (= 11.4.0-2), gcc-13 (= 13.2.0-2), 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1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.07-1), tar (= 1.34+dfsg-1.2), usrmerge (= 36), util-linux (= 2.39.2-1), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1667329747" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ clonalframeml-dbgsym_1.12-3_armel.deb ------------------------------------- new Debian package, version 2.0. size 885240 bytes: control archive=536 bytes. 392 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: clonalframeml-dbgsym Source: clonalframeml Version: 1.12-3 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 900 Depends: clonalframeml (= 1.12-3) Section: debug Priority: optional Description: debug symbols for clonalframeml Build-Ids: 688b136a3ffe958f1d9d78a8540b44dc96c3e315 drwxr-xr-x root/root 0 2022-11-01 19:09 ./ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/lib/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/lib/debug/.build-id/68/ -rw-r--r-- root/root 911168 2022-11-01 19:09 ./usr/lib/debug/.build-id/68/8b136a3ffe958f1d9d78a8540b44dc96c3e315.debug drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-11-01 19:09 ./usr/share/doc/clonalframeml-dbgsym -> clonalframeml clonalframeml_1.12-3_armel.deb ------------------------------ new Debian package, version 2.0. size 91300 bytes: control archive=1192 bytes. 1491 bytes, 27 lines control 282 bytes, 4 lines md5sums Package: clonalframeml Version: 1.12-3 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 248 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libstdc++6 (>= 13.1) Section: science Priority: optional Homepage: https://github.com/xavierdidelot/ClonalFrameML Description: Efficient Inference of Recombination in Whole Bacterial Genomes ClonalFrameML is a software package that performs efficient inference of recombination in bacterial genomes. ClonalFrameML was created by Xavier Didelot and Daniel Wilson. ClonalFrameML can be applied to any type of aligned sequence data, but is especially aimed at analysis of whole genome sequences. It is able to compare hundreds of whole genomes in a matter of hours on a standard Desktop computer. There are three main outputs from a run of ClonalFrameML: a phylogeny with branch lengths corrected to account for recombination, an estimation of the key parameters of the recombination process, and a genomic map of where recombination took place for each branch of the phylogeny. . ClonalFrameML is a maximum likelihood implementation of the Bayesian software ClonalFrame which was previously described by Didelot and Falush (2007). The recombination model underpinning ClonalFrameML is exactly the same as for ClonalFrame, but this new implementation is a lot faster, is able to deal with much larger genomic dataset, and does not suffer from MCMC convergence issues drwxr-xr-x root/root 0 2022-11-01 19:09 ./ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/bin/ -rwxr-xr-x root/root 239108 2022-11-01 19:09 ./usr/bin/ClonalFrameML drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/doc/clonalframeml/ -rw-r--r-- root/root 528 2022-11-01 19:09 ./usr/share/doc/clonalframeml/changelog.Debian.gz -rw-r--r-- root/root 1830 2022-11-01 19:09 ./usr/share/doc/clonalframeml/copyright drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/man/ drwxr-xr-x root/root 0 2022-11-01 19:09 ./usr/share/man/man1/ -rw-r--r-- root/root 1683 2022-11-01 19:09 ./usr/share/man/man1/ClonalFrameML.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1296 B] Get:5 copy:/<>/apt_archive ./ Packages [1375 B] Fetched 3286 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:armel t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.10-1 [1415 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.42.0-1 [859 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.19-2 [91.0 kB] Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.57-1 [221 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.29-1 [16.5 kB] Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1 [131 kB] Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-2 [81.8 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:73 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:74 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:75 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:76 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:79 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:82 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:97 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:100 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:111 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:113 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:121 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:123 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:124 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:125 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:126 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.7 MB in 0s (80.8 MB/s) Selecting previously unselected package netbase. 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.42.0-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.29-1) ... Setting up libsereal-encoder-perl (5.004+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.38-1) ... Setting up libipc-system-simple-perl (1.30-2) ... 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Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.57-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.37-7) ... Processing triggers for man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 9264 Build-Time: 16 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 11 Job: clonalframeml_1.12-3 Lintian: pass Machine Architecture: amd64 Package: clonalframeml Package-Time: 39 Source-Version: 1.12-3 Space: 9264 Status: successful Version: 1.12-3 -------------------------------------------------------------------------------- Finished at 2023-08-27T16:02:56Z Build needed 00:00:39, 9264k disk space