sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | clonalorigin 1.0-3 (armhf) Thu, 10 Sep 2020 20:59:33 +0000 | +==============================================================================+ Package: clonalorigin Version: 1.0-3 Source Version: 1.0-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-90de1164-b5cb-4e6c-8151-d69faff586bf' with '<>' I: NOTICE: Log filtering will replace 'build/clonalorigin-88I2XL/resolver-bPYqfJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-10-0802.56.pdiff [5685 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-10-1403.14.pdiff [12.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-10-2006.38.pdiff [11.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-09-10-2006.38.pdiff [11.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-10-0802.56.pdiff [6388 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-10-1403.14.pdiff [19.5 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-10-2006.38.pdiff [13.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-09-10-2006.38.pdiff [13.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8110 kB] Fetched 8380 kB in 9s (960 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: sysvinit-utils 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 25.0 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 sysvinit-utils amd64 2.96-5 [25.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.0 kB in 0s (1863 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10442 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-5_amd64.deb ... Unpacking sysvinit-utils (2.96-5) over (2.96-4) ... Setting up sysvinit-utils (2.96-5) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'clonalorigin' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/clonalorigin.git Please use: git clone https://salsa.debian.org/med-team/clonalorigin.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 196 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main clonalorigin 1.0-3 (dsc) [1992 B] Get:2 http://debian.oregonstate.edu/debian unstable/main clonalorigin 1.0-3 (tar) [186 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main clonalorigin 1.0-3 (diff) [8112 B] Fetched 196 kB in 0s (3442 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/clonalorigin-88I2XL/clonalorigin-1.0' with '<>' I: NOTICE: Log filtering will replace 'build/clonalorigin-88I2XL' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), libgsl-dev, rename, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper (>= 11~), libgsl-dev, rename, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [410 B] Get:5 copy:/<>/apt_archive ./ Packages [502 B] Fetched 1869 B in 0s (79.4 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-10-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf-base gcc-10-base:armhf gcc-10-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl25:armhf libgslcblas0:armhf libicu67 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-10-dev libstdc++-10-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.30 po-debconf rename sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf glibc-doc manpages-dev:armhf gnupg git bzr gsl-ref-psdoc:armhf | gsl-doc-pdf:armhf | gsl-doc-info:armhf | gsl-ref-html:armhf libstdc++-10-doc libstdc++-9-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:armhf libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl libio-stringy-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-10-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf gcc-10-arm-linux-gnueabihf-base gcc-10-base:armhf gcc-10-cross-base gcc-9-base:armhf gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armhf-cross libgcc-9-dev:armhf libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl25:armhf libgslcblas0:armhf libicu67 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-10-dev libstdc++-10-dev-armhf-cross libstdc++-9-dev:armhf libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.30 po-debconf rename sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 96.6 MB of archives. After this operation, 394 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main armhf gcc-10-base armhf 10.2.0-6 [199 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armhf gcc-9-base armhf 9.3.0-17 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-3 [801 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.35-2 [2766 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-6 [1737 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-6 [8663 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.1.0-1 [1644 B] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabihf-base amd64 10.2.0-3cross2 [198 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-arm-linux-gnueabihf amd64 10.2.0-3cross2 [7518 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:10.1.0-1 [16.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-3cross2 [195 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.31-1cross2 [1115 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 10.2.0-3cross2 [36.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 10.2.0-3cross2 [82.9 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 10.2.0-3cross2 [6644 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 10.2.0-3cross2 [303 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 10.2.0-3cross2 [380 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 10.2.0-3cross2 [115 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-armhf-cross all 10.2.0-3cross2 [693 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabihf amd64 10.2.0-3cross2 [14.9 MB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:10.1.0-1 [1476 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.7.6-1cross2 [1198 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.31-1cross2 [1901 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-armhf-cross all 10.2.0-3cross2 [1751 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-arm-linux-gnueabihf amd64 10.2.0-3cross2 [8181 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:10.1.0-1 [1184 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6 [692 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.8 [6644 B] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2 [187 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.180-1+b1 [165 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.4-1 [1341 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2 [1007 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 10.2.0-6 [36.1 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.17-1 [94.9 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.31-3 [2350 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 9.3.0-17 [370 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 10.2.0-6 [6888 B] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.8.7-1 [1144 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.17-1 [113 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.31-3 [1924 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 10.2.0-6 [84.7 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 10.2.0-6 [420 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 10.2.0-6 [116 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-9-dev armhf 9.3.0-17 [661 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armhf libgslcblas0 armhf 2.6+dfsg-2 [80.0 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf libgsl25 armhf 2.6+dfsg-2 [769 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libgsl-dev armhf 2.6+dfsg-2 [963 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-9-dev armhf 9.3.0-17 [1757 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 rename all 1.13-1 [18.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 96.6 MB in 1s (110 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10442 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36-3_amd64.deb ... Unpacking bsdextrautils (2.36-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... 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Setting up gcc-10-arm-linux-gnueabihf-base:amd64 (10.2.0-3cross2) ... Setting up gcc-9-base:armhf (9.3.0-17) ... Setting up libgomp1-armhf-cross (10.2.0-3cross2) ... Setting up libstdc++-10-dev:amd64 (10.2.0-6) ... Setting up g++-10 (10.2.0-6) ... Setting up libtool (2.4.6-14) ... Setting up libgcc-s1-armhf-cross (10.2.0-3cross2) ... Setting up libc6-dev-armhf-cross (2.31-1cross2) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-armhf-cross (10.2.0-3cross2) ... Setting up perl (5.30.3-4) ... Setting up libstdc++6-armhf-cross (10.2.0-3cross2) ... Setting up libasan6-armhf-cross (10.2.0-3cross2) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up cpp-10-arm-linux-gnueabihf (10.2.0-3cross2) ... Setting up libubsan1-armhf-cross (10.2.0-3cross2) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.1.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up libgcc-10-dev-armhf-cross (10.2.0-3cross2) ... Setting up cpp-arm-linux-gnueabihf (4:10.1.0-1) ... Setting up automake (1:1.16.2-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up gcc-10-arm-linux-gnueabihf (10.2.0-3cross2) ... Setting up libstdc++-10-dev-armhf-cross (10.2.0-3cross2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up rename (1.13-1) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up g++-10-arm-linux-gnueabihf (10.2.0-3cross2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up gcc-arm-linux-gnueabihf (4:10.1.0-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up g++-arm-linux-gnueabihf (4:10.1.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-armhf (12.8) ... Setting up libcrypt1:armhf (1:4.4.17-1) ... Setting up libgcc-s1:armhf (10.2.0-6) ... Setting up dh-autoreconf (19) ... Setting up libc6:armhf (2.31-3) ... Setting up libcrypt-dev:armhf (1:4.4.17-1) ... Setting up libc6-dev:armhf (2.31-3) ... Setting up libstdc++6:armhf (10.2.0-6) ... Setting up libgslcblas0:armhf (2.6+dfsg-2) ... Setting up libgsl25:armhf (2.6+dfsg-2) ... Setting up debhelper (13.2) ... Setting up libgomp1:armhf (10.2.0-6) ... Setting up libasan5:armhf (9.3.0-17) ... Setting up libatomic1:armhf (10.2.0-6) ... Setting up libubsan1:armhf (10.2.0-6) ... Setting up libgsl-dev:armhf (2.6+dfsg-2) ... Setting up libgcc-9-dev:armhf (9.3.0-17) ... Setting up libstdc++-9-dev:armhf (9.3.0-17) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.31-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) amd64 (x86_64) Toolchain package versions: binutils_2.35-2 dpkg-dev_1.20.5 g++-10_10.2.0-6 gcc-10_10.2.0-6 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-6 libstdc++-10-dev-armhf-cross_10.2.0-3cross2 libstdc++-9-dev_9.3.0-17 libstdc++6_10.2.0-6 libstdc++6-armhf-cross_10.2.0-3cross2 linux-libc-dev_5.8.7-1 Package versions: adduser_3.118 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 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libdebian-dpkgcross-perl_2.6.15-3.1 libdpkg-perl_1.20.5 libelf1_0.180-1+b1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.36-3 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-6 libgcc-10-dev-armhf-cross_10.2.0-3cross2 libgcc-9-dev_9.3.0-17 libgcc-s1_10.2.0-6 libgcc-s1-armhf-cross_10.2.0-3cross2 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-1 libgomp1_10.2.0-6 libgomp1-armhf-cross_10.2.0-3cross2 libgpg-error0_1.38-2 libgsl-dev_2.6+dfsg-2 libgsl25_2.6+dfsg-2 libgslcblas0_2.6+dfsg-2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-6 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-6 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libquadmath0_10.2.0-6 libseccomp2_2.4.3-1+b1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3 libss2_1.45.6-1 libstdc++-10-dev_10.2.0-6 libstdc++-10-dev-armhf-cross_10.2.0-3cross2 libstdc++-9-dev_9.3.0-17 libstdc++6_10.2.0-6 libstdc++6-armhf-cross_10.2.0-3cross2 libsub-override-perl_0.09-2 libsystemd0_246.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.2.0-6 libubsan1_10.2.0-6 libubsan1-armhf-cross_10.2.0-3cross2 libuchardet0_0.0.7-1 libudev1_246.4-1 libunistring2_0.9.10-4 libuuid1_2.36-3 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.7-1 linux-libc-dev-armhf-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 po-debconf_1.0.21 rename_1.13-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.36-3 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: clonalorigin Binary: clonalorigin Architecture: any Version: 1.0-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/xavierdidelot/clonalorigin Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/clonalorigin Vcs-Git: https://salsa.debian.org/med-team/clonalorigin.git Build-Depends: debhelper (>= 11~), libgsl-dev, rename Package-List: clonalorigin deb science optional arch=any Checksums-Sha1: a7bc183ea6aea575a5f5fa9217d9112d2ff4884f 185865 clonalorigin_1.0.orig.tar.gz 37ece5357786bdb20e455f09b734aa9a325798dd 8112 clonalorigin_1.0-3.debian.tar.xz Checksums-Sha256: 73962415160b8b496c81d3e9cbbf68f76c02caf4dd6b41860f01d493b71c6e3a 185865 clonalorigin_1.0.orig.tar.gz 92372f6c73ec9b47577b212bc6ff4a2f1e25d46c5870e78d4d0c24c050e2d180 8112 clonalorigin_1.0-3.debian.tar.xz Files: 310a0c5714e7629c052ab4da50c90f44 185865 clonalorigin_1.0.orig.tar.gz c7ce717ec116d4c1472c0ab5ca22dc8f 8112 clonalorigin_1.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- 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14:43:18 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./clonalorigin_1.0-3.dsc dpkg-source: info: extracting clonalorigin in /<> dpkg-source: info: unpacking clonalorigin_1.0.orig.tar.gz dpkg-source: info: unpacking clonalorigin_1.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying portability.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-90de1164-b5cb-4e6c-8151-d69faff586bf SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package clonalorigin dpkg-buildpackage: info: source version 1.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=warg dh_auto_clean -O--sourcedirectory=warg dh_autoreconf_clean -O--sourcedirectory=warg dh_clean -O--sourcedirectory=warg debian/rules build-arch dh build-arch --sourcedirectory=warg dh_update_autotools_config -a -O--sourcedirectory=warg dh_autoreconf -a -O--sourcedirectory=warg configure.ac:41: installing 'config/compile' configure.ac:9: installing 'config/install-sh' configure.ac:9: installing 'config/missing' Makefile.am: installing './INSTALL' src/Makefile.am: installing 'config/depcomp' parallel-tests: installing 'config/test-driver' dh_auto_configure -a -O--sourcedirectory=warg cd warg && ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 0.2.5... cross compiling; assumed OK... yes checking how to run the C preprocessor... arm-linux-gnueabihf-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for floor... no checking for pow... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating scripts/Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build -a -O--sourcedirectory=warg cd warg && make -j1 make[1]: Entering directory '/<>/warg' Making all in src make[2]: Entering directory '/<>/warg/src' make all-am make[3]: Entering directory '/<>/warg/src' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-data.o `test -f 'data.cpp' || echo './'`data.cpp data.cpp: In constructor ‘weakarg::Data::Data(std::string)’: data.cpp:50:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 50 | }else if(getNumber(tmpname)!=which){ | ~~~~~~~~~~~~~~~~~~^~~~~~~ data.cpp: In member function ‘void weakarg::Data::subset(std::vector, int)’: data.cpp:169:14: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 169 | if (num<=0 &&seed>=0 || num<0) return; | ~~~~~~~^~~~~~~~~ data.cpp:177:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 177 | for(int i=0;i=0) {if(!tried[numv[i]]) {regions.push_back(numv[i]);tried[numv[i]]=true;}else{cerr<<"Warning: Duplicate blocks of "<, int>::value_type’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 177 | for(int i=0;i=0) {if(!tried[numv[i]]) {regions.push_back(numv[i]);tried[numv[i]]=true;}else{cerr<<"Warning: Duplicate blocks of "<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-rng.o `test -f 'rng.cpp' || echo './'`rng.cpp rng.cpp: In function ‘long unsigned int weakarg::makerng(bool)’: rng.cpp:16:14: warning: variable ‘rng_seed’ set but not used [-Wunused-but-set-variable] 16 | long int rng_seed; | ^~~~~~~~ rng.cpp: In function ‘int weakarg::loadrng(std::string)’: rng.cpp:66:14: warning: variable ‘rng_seed’ set but not used [-Wunused-but-set-variable] 66 | long int rng_seed; | ^~~~~~~~ rng.cpp: In function ‘long unsigned int weakarg::seedrng(long unsigned int)’: rng.cpp:40:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 40 | fread(&tseed,sizeof(tseed),1,devrandom); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-wargxml.o `test -f 'wargxml.cpp' || echo './'`wargxml.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-move.o `test -f 'move.cpp' || echo './'`move.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-metropolis.o `test -f 'metropolis.cpp' || echo './'`metropolis.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moveaddedge.o `test -f 'moveaddedge.cpp' || echo './'`moveaddedge.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moveageclonal.o `test -f 'moveageclonal.cpp' || echo './'`moveageclonal.cpp moveageclonal.cpp: In member function ‘virtual int weakarg::MoveAgeClonal::move()’: moveageclonal.cpp:126:43: warning: ‘movetemp’ may be used uninitialized in this function [-Wmaybe-uninitialized] 126 | if(movetemp!=NULL) delete(movetemp); | ^ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movedelta.o `test -f 'movedelta.cpp' || echo './'`movedelta.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moveedgechange.o `test -f 'moveedgechange.cpp' || echo './'`moveedgechange.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moveregraftclonal.o `test -f 'moveregraftclonal.cpp' || echo './'`moveregraftclonal.cpp moveregraftclonal.cpp: In member function ‘virtual int weakarg::MoveRegraftClonal::move()’: moveregraftclonal.cpp:43:9: warning: unused variable ‘notmovednode’ [-Wunused-variable] 43 | int notmovednode=rectree->otherChild(origfather,which); | ^~~~~~~~~~~~ moveregraftclonal.cpp: In member function ‘void weakarg::MoveRegraftClonal::regraft(int, int)’: moveregraftclonal.cpp:157:54: warning: unused variable ‘wnode’ [-Wunused-variable] 157 | Node *fanode=rectree->getNode(which)->getFather(), *wnode=rectree->getNode(which), *wtonode=rectree->getNode(whichto); | ^~~~~ moveregraftclonal.cpp:157:86: warning: unused variable ‘wtonode’ [-Wunused-variable] 157 | Node *fanode=rectree->getNode(which)->getFather(), *wnode=rectree->getNode(which), *wtonode=rectree->getNode(whichto); | ^~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moveremedge.o `test -f 'moveremedge.cpp' || echo './'`moveremedge.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-moverho.o `test -f 'moverho.cpp' || echo './'`moverho.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movescaletree.o `test -f 'movescaletree.cpp' || echo './'`movescaletree.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movegreedytree.o `test -f 'movegreedytree.cpp' || echo './'`movegreedytree.cpp movegreedytree.cpp: In member function ‘void weakarg::MoveGreedyTree::applyChanges(std::vector)’: movegreedytree.cpp:230:19: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 230 | int whichto=-1,tmp; | ^~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movesitechange.o `test -f 'movesitechange.cpp' || echo './'`movesitechange.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from data.h:3, from param.h:3, from move.h:4, from movesitechange.h:4, from movesitechange.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘std::vector weakarg::MoveSiteChange::calcPost(std::vector*, std::vector*, int, int, int, int, bool)’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movetheta.o `test -f 'movetheta.cpp' || echo './'`movetheta.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-movetimechange.o `test -f 'movetimechange.cpp' || echo './'`movetimechange.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-mpiutils.o `test -f 'mpiutils.cpp' || echo './'`mpiutils.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-node.o `test -f 'node.cpp' || echo './'`node.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-param.o `test -f 'param.cpp' || echo './'`param.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-recedge.o `test -f 'recedge.cpp' || echo './'`recedge.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-rectree.o `test -f 'rectree.cpp' || echo './'`rectree.cpp rectree.cpp: In member function ‘int weakarg::RecTree::moveNodeTime(int, int*, double, int, std::vector*, std::vector*)’: rectree.cpp:1112:7: warning: variable ‘newfather’ set but not used [-Wunused-but-set-variable] 1112 | int newfather,notnewfather; | ^~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from node.h:4, from tree.h:3, from rectree.h:3, from rectree.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void weakarg::RecTree::chooseNodePath(int, double, std::vector*, std::vector*)’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-tree.o `test -f 'tree.cpp' || echo './'`tree.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from node.h:4, from tree.h:3, from tree.cpp:1: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void weakarg::Tree::makeFromNewick(std::string, bool)’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o warg-weakarg.o `test -f 'weakarg.cpp' || echo './'`weakarg.cpp weakarg.cpp:40:13: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 40 | ret.append(__DATE__); | ^~~~~~~~ weakarg.cpp:42:13: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 42 | ret.append(__TIME__); | ^~~~~~~~ weakarg.cpp: In function ‘int main(int, char**)’: weakarg.cpp:127:10: warning: variable ‘setregions’ set but not used [-Wunused-but-set-variable] 127 | bool setregions=false; | ^~~~~~~~~~ weakarg.cpp: In function ‘std::vector weakarg::readInputFiles(weakarg::Data*&, weakarg::RecTree*&, std::vector&, std::vector&, std::vector&, std::vector >, std::string, int)’: weakarg.cpp:342:7: warning: variable ‘setregions’ set but not used [-Wunused-but-set-variable] 342 | bool setregions=false; | ^~~~~~~~~~ weakarg.cpp: In function ‘bool weakarg::initializeTree(weakarg::Data*&, weakarg::RecTree*&, std::vector >, std::string)’: weakarg.cpp:404:2: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 404 | if(readparams) p->setTheta(pars[2]);p->setRho(pars[0]);p->setDelta(pars[2]); | ^~ weakarg.cpp:404:38: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 404 | if(readparams) p->setTheta(pars[2]);p->setRho(pars[0]);p->setDelta(pars[2]); | ^ In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:72, from node.h:4, from tree.h:3, from rectree.h:3, from weakarg.cpp:6: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/10/vector:67, from node.h:4, from tree.h:3, from rectree.h:3, from weakarg.cpp:6: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h: In function ‘weakarg::ProgramOptions& weakarg::opt()’: /usr/arm-linux-gnueabihf/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -I/usr/include -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -funroll-loops -fomit-frame-pointer -ftree-vectorize -funsafe-math-optimizations -Wl,-z,relro -Wl,-z,now -o warg warg-data.o warg-rng.o warg-wargxml.o warg-move.o warg-metropolis.o warg-moveaddedge.o warg-moveageclonal.o warg-movedelta.o warg-moveedgechange.o warg-moveregraftclonal.o warg-moveremedge.o warg-moverho.o warg-movescaletree.o warg-movegreedytree.o warg-movesitechange.o warg-movetheta.o warg-movetimechange.o warg-mpiutils.o warg-node.o warg-param.o warg-recedge.o warg-rectree.o warg-tree.o warg-weakarg.o -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm make[3]: Leaving directory '/<>/warg/src' make[2]: Leaving directory '/<>/warg/src' Making all in scripts make[2]: Entering directory '/<>/warg/scripts' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/<>/warg/scripts' make[2]: Entering directory '/<>/warg' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>/warg' make[1]: Leaving directory '/<>/warg' dh_auto_test -a -O--sourcedirectory=warg create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --sourcedirectory=warg dh_testroot -a -O--sourcedirectory=warg dh_prep -a -O--sourcedirectory=warg dh_auto_install -a -O--sourcedirectory=warg cd warg && make -j1 install DESTDIR=/<>/debian/clonalorigin AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>/warg' Making install in src make[2]: Entering directory '/<>/warg/src' make[3]: Entering directory '/<>/warg/src' /bin/mkdir -p '/<>/debian/clonalorigin/usr/bin' /usr/bin/install -c warg '/<>/debian/clonalorigin/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/warg/src' make[2]: Leaving directory '/<>/warg/src' Making install in scripts make[2]: Entering directory '/<>/warg/scripts' make[3]: Entering directory '/<>/warg/scripts' /bin/mkdir -p '/<>/debian/clonalorigin/usr/bin' /usr/bin/install -c blocksplit.pl computeMedians.pl makeMauveWargFile.pl '/<>/debian/clonalorigin/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/warg/scripts' make[2]: Leaving directory '/<>/warg/scripts' make[2]: Entering directory '/<>/warg' make[3]: Entering directory '/<>/warg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/warg' make[2]: Leaving directory '/<>/warg' make[1]: Leaving directory '/<>/warg' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install rename 's/\.pl//' debian/clonalorigin/usr/bin/*.pl make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=warg dh_installchangelogs -a -O--sourcedirectory=warg dh_installman -a -O--sourcedirectory=warg dh_installinit -a -O--sourcedirectory=warg dh_perl -a -O--sourcedirectory=warg dh_link -a -O--sourcedirectory=warg dh_strip_nondeterminism -a -O--sourcedirectory=warg dh_compress -a -O--sourcedirectory=warg dh_fixperms -a -O--sourcedirectory=warg dh_missing -a -O--sourcedirectory=warg dh_strip -a -O--sourcedirectory=warg dh_makeshlibs -a -O--sourcedirectory=warg dh_shlibdeps -a -O--sourcedirectory=warg dpkg-shlibdeps: warning: debian/clonalorigin/usr/bin/warg contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a -O--sourcedirectory=warg dh_gencontrol -a -O--sourcedirectory=warg dpkg-gencontrol: warning: package clonalorigin: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package clonalorigin: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a -O--sourcedirectory=warg dh_builddeb -a -O--sourcedirectory=warg dpkg-deb: building package 'clonalorigin' in '../clonalorigin_1.0-3_armhf.deb'. dpkg-deb: building package 'clonalorigin-dbgsym' in '../clonalorigin-dbgsym_1.0-3_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../clonalorigin_1.0-3_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-09-10T21:01:04Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ clonalorigin_1.0-3_armhf.changes: --------------------------------- Format: 1.8 Date: Wed, 02 Jan 2019 15:29:03 +0100 Source: clonalorigin Binary: clonalorigin clonalorigin-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: clonalorigin - inference of homologous recombination in bacteria using whole gen Changes: clonalorigin (1.0-3) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.3.0 Checksums-Sha1: f1454e0234edf32d6960c6e7f21cd25d2b6c02cc 2174868 clonalorigin-dbgsym_1.0-3_armhf.deb 8b6bdead59df127d58145b44e6891dfe1d8c388a 4624 clonalorigin_1.0-3_armhf.buildinfo cbaea273886ff6b84c6cd62944f76e867d6ef642 136436 clonalorigin_1.0-3_armhf.deb Checksums-Sha256: 3f16b3f050e37de1482eca8fed7a891c2e9caa0bcf579d95f4c8a0dac1232b91 2174868 clonalorigin-dbgsym_1.0-3_armhf.deb 171deeb47227b720f1ac657b871ce4b8be04d62e994647934436c4b14ad45bac 4624 clonalorigin_1.0-3_armhf.buildinfo afcf1e35524414e827c27106e25f7fe1687233f330f21055207d6e9442ac19be 136436 clonalorigin_1.0-3_armhf.deb Files: e684408687c5927303e1295d02d71108 2174868 debug optional clonalorigin-dbgsym_1.0-3_armhf.deb 8cdd77a5323fa20cec91909457838424 4624 science optional clonalorigin_1.0-3_armhf.buildinfo 3564690d640ffae223df52b3ac1f0a83 136436 science optional clonalorigin_1.0-3_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: clonalorigin Binary: clonalorigin clonalorigin-dbgsym Architecture: armhf Version: 1.0-3 Checksums-Md5: e684408687c5927303e1295d02d71108 2174868 clonalorigin-dbgsym_1.0-3_armhf.deb 3564690d640ffae223df52b3ac1f0a83 136436 clonalorigin_1.0-3_armhf.deb Checksums-Sha1: f1454e0234edf32d6960c6e7f21cd25d2b6c02cc 2174868 clonalorigin-dbgsym_1.0-3_armhf.deb cbaea273886ff6b84c6cd62944f76e867d6ef642 136436 clonalorigin_1.0-3_armhf.deb Checksums-Sha256: 3f16b3f050e37de1482eca8fed7a891c2e9caa0bcf579d95f4c8a0dac1232b91 2174868 clonalorigin-dbgsym_1.0-3_armhf.deb afcf1e35524414e827c27106e25f7fe1687233f330f21055207d6e9442ac19be 136436 clonalorigin_1.0-3_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 10 Sep 2020 21:01:04 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-3), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-7), binutils (= 2.35-2), binutils-common (= 2.35-2), binutils-x86-64-linux-gnu (= 2.35-2), bsdextrautils (= 2.36-3), bsdutils (= 1:2.36-3), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-3), cpp (= 4:10.1.0-1), cpp-10 (= 10.2.0-6), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2), debianutils (= 4.11.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:10.1.0-1), g++-10 (= 10.2.0-6), gcc (= 4:10.1.0-1), gcc-10 (= 10.2.0-6), gcc-10-base (= 10.2.0-6), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-6), libatomic1 (= 10.2.0-6), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.35-2), libblkid1 (= 2.36-3), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-3), libc-dev-bin (= 2.31-3), libc6 (= 2.31-3), libc6-dev (= 2.31-3), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-6), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35-2), libctf0 (= 2.35-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.253), libdebhelper-perl (= 13.2), libdpkg-perl (= 1.20.5), libelf1 (= 0.180-1+b1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-6), libgcc-s1 (= 10.2.0-6), libgcrypt20 (= 1.8.6-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.64.4-1), libgmp10 (= 2:6.2.0+dfsg-6), libgomp1 (= 10.2.0-6), libgpg-error0 (= 1.38-2), libgsl-dev (= 2.6+dfsg-2), libgsl25 (= 2.6+dfsg-2), libgslcblas0 (= 2.6+dfsg-2), libicu67 (= 67.1-4), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-6), liblsan0 (= 10.2.0-6), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-6), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-3), libstdc++-10-dev (= 10.2.0-6), libstdc++6 (= 10.2.0-6), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.4-1), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-6), libubsan1 (= 10.2.0-6), libuchardet0 (= 0.0.7-1), libudev1 (= 246.4-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3), libxml2 (= 2.9.10+dfsg-6), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.7-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), rename (= 1.13-1), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-3), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1546439343" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ clonalorigin-dbgsym_1.0-3_armhf.deb ----------------------------------- new Debian package, version 2.0. size 2174868 bytes: control archive=540 bytes. 387 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: clonalorigin-dbgsym Source: clonalorigin Version: 1.0-3 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 2189 Depends: clonalorigin (= 1.0-3) Section: debug Priority: optional Description: debug symbols for clonalorigin Build-Ids: 517c8b7f27fc84cd2b7d80d675da189d1d2db7fb drwxr-xr-x root/root 0 2019-01-02 14:29 ./ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/lib/debug/.build-id/51/ -rw-r--r-- root/root 2231244 2019-01-02 14:29 ./usr/lib/debug/.build-id/51/7c8b7f27fc84cd2b7d80d675da189d1d2db7fb.debug drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-02 14:29 ./usr/share/doc/clonalorigin-dbgsym -> clonalorigin clonalorigin_1.0-3_armhf.deb ---------------------------- new Debian package, version 2.0. size 136436 bytes: control archive=1164 bytes. 1072 bytes, 20 lines control 507 bytes, 8 lines md5sums Package: clonalorigin Version: 1.0-3 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 269 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgsl25 (>= 2.6), libstdc++6 (>= 5.2) Section: science Priority: optional Homepage: https://github.com/xavierdidelot/clonalorigin Description: inference of homologous recombination in bacteria using whole genome sequences Bacteria, unlike us, can reproduce on their own. They do however have mechanisms that transfer DNA between organisms, a process more formally known as recombination. The mechanisms by which recombination takes place have been studied extensively in the laboratory but much remains to be understood concerning how, when and where recombination takes place within natural populations of bacteria and how it helps them to adapt to new environments. ClonalOrigin performs a comparative analysis of the sequences of a sample of bacterial genomes in order to reconstruct the recombination events that have taken place in their ancestry. drwxr-xr-x root/root 0 2019-01-02 14:29 ./ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/bin/ -rwxr-xr-x root/root 430 2019-01-02 14:29 ./usr/bin/blocksplit lrwxrwxrwx root/root 0 2019-01-02 14:29 ./usr/bin/clonalorigin -> warg -rwxr-xr-x root/root 3039 2019-01-02 14:29 ./usr/bin/computeMedians -rwxr-xr-x root/root 1111 2019-01-02 14:29 ./usr/bin/makeMauveWargFile -rwxr-xr-x root/root 252548 2019-01-02 14:29 ./usr/bin/warg drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/doc/clonalorigin/ -rw-r--r-- root/root 504 2019-01-02 14:29 ./usr/share/doc/clonalorigin/README.Debian -rw-r--r-- root/root 288 2019-01-02 14:29 ./usr/share/doc/clonalorigin/changelog.Debian.gz -rw-r--r-- root/root 514 2019-01-02 14:29 ./usr/share/doc/clonalorigin/copyright drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-02 14:29 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2019-01-02 14:29 ./usr/share/man/man1/clonalorigin.1.gz -> warg.1.gz -rw-r--r-- root/root 1604 2019-01-02 14:29 ./usr/share/man/man1/warg.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [541 B] Get:5 copy:/<>/apt_archive ./ Packages [630 B] Fetched 2134 B in 0s (91.1 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 7529 kB of archives. After this operation, 22.1 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.23-1 [128 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.07-3+b5 [22.9 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4 [38.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1 [21.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.6-1 [36.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b6 [17.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2 [45.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1 [98.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1 [103 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1 [12.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010006-1 [339 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.93.0 [1281 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7529 kB in 0s (33.8 MB/s) Selecting previously unselected package readline-common. (Reading database ... 21128 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../06-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../07-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../20-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../21-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../22-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../23-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../24-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../25-libcpanel-json-xs-perl_4.23-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.23-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../26-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../27-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../28-libiterator-perl_0.03+ds1-1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../29-libiterator-util-perl_0.02+ds1-1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../30-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../31-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../32-libparams-util-perl_1.07-3+b5_amd64.deb ... Unpacking libparams-util-perl (1.07-3+b5) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../33-libsub-install-perl_0.928-1_all.deb ... Unpacking libsub-install-perl (0.928-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../34-libdata-optlist-perl_0.110-1_all.deb ... Unpacking libdata-optlist-perl (0.110-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../35-libsub-exporter-perl_0.987-1_all.deb ... Unpacking libsub-exporter-perl (0.987-1) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../36-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../37-libdata-messagepack-perl_1.00-4_amd64.deb ... Unpacking libdata-messagepack-perl (1.00-4) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../38-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../39-libdata-validate-domain-perl_0.10-1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../40-libdevel-size-perl_0.83-1+b1_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b1) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../41-libemail-address-xs-perl_1.04-1+b2_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b2) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../42-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../43-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../44-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../45-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../46-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../47-libfont-ttf-perl_1.06-1_all.deb ... Unpacking libfont-ttf-perl (1.06-1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../48-libhtml-html5-entities-perl_0.004-1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../49-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../50-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../51-libjson-maybexs-perl_1.004002-1_all.deb ... Unpacking libjson-maybexs-perl (1.004002-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../52-liblist-compare-perl_0.55-1_all.deb ... Unpacking liblist-compare-perl (0.55-1) ... Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../53-liblist-utilsby-perl_0.11-1_all.deb ... Unpacking liblist-utilsby-perl (0.11-1) ... Selecting previously unselected package liblzo2-2:amd64. Preparing to unpack .../54-liblzo2-2_2.10-2_amd64.deb ... Unpacking liblzo2-2:amd64 (2.10-2) ... Selecting previously unselected package libmarkdown2:amd64. Preparing to unpack .../55-libmarkdown2_2.2.6-1_amd64.deb ... Unpacking libmarkdown2:amd64 (2.2.6-1) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../56-librole-tiny-perl_2.001004-1_all.deb ... Unpacking librole-tiny-perl (2.001004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../57-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../58-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../59-libmoo-perl_2.004000-1_all.deb ... Unpacking libmoo-perl (2.004000-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../60-libmoox-aliases-perl_0.001006-1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../61-libmouse-perl_2.5.10-1_amd64.deb ... Unpacking libmouse-perl (2.5.10-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../62-libpackage-stash-perl_0.38-1_all.deb ... Unpacking libpackage-stash-perl (0.38-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../63-libsub-identify-perl_0.14-1+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b2) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../64-libsub-name-perl_0.26-1_amd64.deb ... Unpacking libsub-name-perl (0.26-1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../65-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 27976 Build-Time: 54 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 20 Job: clonalorigin_1.0-3 Lintian: pass Machine Architecture: amd64 Package: clonalorigin Package-Time: 91 Source-Version: 1.0-3 Space: 27976 Status: successful Version: 1.0-3 -------------------------------------------------------------------------------- Finished at 2020-09-10T21:01:04Z Build needed 00:01:31, 27976k disk space