sbuild (Debian sbuild) 0.81.2 (31 January 2021) on debian-ci-siliconvalley +==============================================================================+ | clustalx 2.1+lgpl-9 (s390x) Sat, 10 Sep 2022 10:35:52 +0000 | +==============================================================================+ Package: clustalx Version: 2.1+lgpl-9 Source Version: 2.1+lgpl-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-ba258925-9410-48bf-ba21-501af92455aa' with '<>' I: NOTICE: Log filtering will replace 'build/clustalx-lGuNQV/resolver-9wRELG' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [192 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-09-10-0203.17-F-2022-09-09-2007.17.pdiff [13.9 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-09-10-0203.17-F-2022-09-09-2007.17.pdiff [13.9 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-09-10-0203.17-F-2022-09-09-2007.17.pdiff [15.1 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-09-10-0203.17-F-2022-09-09-2007.17.pdiff [15.1 kB] Get:6 http://localhost:3142/debian sid/main s390x Packages [8901 kB] Fetched 9249 kB in 3s (3313 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be REMOVED: lsb-base The following packages will be upgraded: sysvinit-utils 1 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. Need to get 31.0 kB of archives. After this operation, 32.8 kB disk space will be freed. Get:1 http://localhost:3142/debian sid/main amd64 sysvinit-utils amd64 3.05-2 [31.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 31.0 kB in 0s (0 B/s) dpkg: lsb-base: dependency problems, but removing anyway as you requested: sysvinit-utils depends on lsb-base (>= 11.0.0~). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13612 files and directories currently installed.) Removing lsb-base (11.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13603 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.05-2_amd64.deb ... Unpacking sysvinit-utils (3.05-2) over (3.04-1) ... Setting up sysvinit-utils (3.05-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'clustalx' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/clustalx.git Please use: git clone https://salsa.debian.org/med-team/clustalx.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 359 kB of source archives. Get:1 http://localhost:3142/debian sid/main clustalx 2.1+lgpl-9 (dsc) [2084 B] Get:2 http://localhost:3142/debian sid/main clustalx 2.1+lgpl-9 (tar) [342 kB] Get:3 http://localhost:3142/debian sid/main clustalx 2.1+lgpl-9 (diff) [15.2 kB] Fetched 359 kB in 3s (128 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/clustalx-lGuNQV/clustalx-2.1+lgpl' with '<>' I: NOTICE: Log filtering will replace 'build/clustalx-lGuNQV' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [420 B] Get:5 copy:/<>/apt_archive ./ Packages [506 B] Fetched 1883 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-12-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file fontconfig fontconfig-config fonts-dejavu-core g++-12-s390x-linux-gnu g++-s390x-linux-gnu gcc-11-base:s390x gcc-12-base:s390x gcc-12-cross-base gcc-12-s390x-linux-gnu gcc-12-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian iso-codes libarchive-zip-perl libasan6:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libavahi-client3 libavahi-client3:s390x libavahi-common-data libavahi-common-data:s390x libavahi-common3 libavahi-common3:s390x libblkid1:s390x libbrotli1 libbrotli1:s390x libbsd0 libbsd0:s390x libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcap2:s390x libcap2-bin libclang1-14 libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:s390x libcrypt1:s390x libcups2 libcups2:s390x libdbus-1-3 libdbus-1-3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdouble-conversion3 libdouble-conversion3:s390x libdrm-amdgpu1 libdrm-amdgpu1:s390x libdrm-common libdrm-nouveau2 libdrm-nouveau2:s390x libdrm-radeon1 libdrm-radeon1:s390x libdrm2 libdrm2:s390x libdw1 libedit2 libedit2:s390x libegl-dev:s390x libegl-mesa0 libegl-mesa0:s390x libegl1 libegl1:s390x libelf1 libelf1:s390x libevdev2 libevdev2:s390x libexpat1 libexpat1:s390x libffi8:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfontconfig1:s390x libfreetype6 libfreetype6:s390x libgbm1 libgbm1:s390x libgcc-11-dev:s390x libgcc-12-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgcrypt20:s390x libgl-dev:s390x libgl1 libgl1:s390x libgl1-mesa-dri libgl1-mesa-dri:s390x libglapi-mesa libglapi-mesa:s390x libglib2.0-0 libglib2.0-0:s390x libglu1-mesa:s390x libglu1-mesa-dev:s390x libglvnd0 libglvnd0:s390x libglx-dev:s390x libglx-mesa0 libglx-mesa0:s390x libglx0 libglx0:s390x libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgpg-error0:s390x libgraphite2-3 libgraphite2-3:s390x libgssapi-krb5-2:s390x libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libgudev-1.0-0:s390x libharfbuzz0b libharfbuzz0b:s390x libhogweed6:s390x libhyphen0 libice6 libice6:s390x libicu71 libicu71:s390x libidn2-0:s390x libinput-bin libinput10 libinput10:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libjpeg62-turbo libjpeg62-turbo:s390x libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libllvm14 libllvm14:s390x liblocale-gettext-perl liblz4-1:s390x liblzma5:s390x libmagic-mgc libmagic1 libmd0 libmd0:s390x libmd4c0 libmd4c0:s390x libmount1:s390x libmpdec3 libmtdev1 libmtdev1:s390x libncursesw6 libnettle8:s390x libnsl-dev:s390x libnsl2:s390x libopengl0:s390x liborc-0.4-0 libp11-kit0:s390x libpcre2-16-0 libpcre2-16-0:s390x libpcre2-8-0:s390x libpipeline1 libpng16-16 libpng16-16:s390x libpthread-stubs0-dev:s390x libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libqt5concurrent5:s390x libqt5core5a libqt5core5a:s390x libqt5dbus5 libqt5dbus5:s390x libqt5designer5 libqt5designercomponents5 libqt5gui5 libqt5gui5:s390x libqt5help5 libqt5network5 libqt5network5:s390x libqt5positioning5 libqt5printsupport5 libqt5printsupport5:s390x libqt5qml5 libqt5qmlmodels5 libqt5quick5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5 libqt5sql5:s390x libqt5sql5-sqlite libqt5test5:s390x libqt5webchannel5 libqt5webkit5 libqt5widgets5 libqt5widgets5:s390x libqt5xml5 libqt5xml5:s390x libreadline8 libselinux1:s390x libsensors-config libsensors5 libsensors5:s390x libsm6 libsm6:s390x libsqlite3-0 libssl3:s390x libstdc++-11-dev:s390x libstdc++-12-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libsystemd0:s390x libtasn1-6:s390x libtinfo6:s390x libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libudev1:s390x libunistring2:s390x libunwind8 libuuid1:s390x libvulkan-dev:s390x libvulkan1:s390x libwacom-common libwacom9 libwacom9:s390x libwayland-client0 libwayland-client0:s390x libwayland-server0 libwayland-server0:s390x libwebp7 libwoff1 libx11-6 libx11-6:s390x libx11-data libx11-dev:s390x libx11-xcb1 libx11-xcb1:s390x libxau-dev:s390x libxau6 libxau6:s390x libxcb-dri2-0 libxcb-dri2-0:s390x libxcb-dri3-0 libxcb-dri3-0:s390x libxcb-glx0 libxcb-glx0:s390x libxcb-icccm4 libxcb-icccm4:s390x libxcb-image0 libxcb-image0:s390x libxcb-keysyms1 libxcb-keysyms1:s390x libxcb-present0 libxcb-present0:s390x libxcb-randr0 libxcb-randr0:s390x libxcb-render-util0 libxcb-render-util0:s390x libxcb-render0 libxcb-render0:s390x libxcb-shape0 libxcb-shape0:s390x libxcb-shm0 libxcb-shm0:s390x libxcb-sync1 libxcb-sync1:s390x libxcb-util1 libxcb-util1:s390x libxcb-xfixes0 libxcb-xfixes0:s390x libxcb-xinerama0 libxcb-xinerama0:s390x libxcb-xinput0 libxcb-xinput0:s390x libxcb-xkb1 libxcb-xkb1:s390x libxcb1 libxcb1:s390x libxcb1-dev:s390x libxdmcp-dev:s390x libxdmcp6 libxdmcp6:s390x libxext-dev:s390x libxext6 libxext6:s390x libxfixes3 libxfixes3:s390x libxkbcommon-x11-0 libxkbcommon-x11-0:s390x libxkbcommon0 libxkbcommon0:s390x libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:s390x libxrender1 libxrender1:s390x libxshmfence1 libxshmfence1:s390x libxslt1.1 libxxf86vm1 libxxf86vm1:s390x libyaml-perl libz3-4 libz3-4:s390x libzstd1:s390x linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db media-types po-debconf python3 python3-minimal python3.10 python3.10-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant qt5-qmake:s390x qt5-qmake-bin qtattributionsscanner-qt5 qtbase5-dev:s390x qtbase5-dev-tools qtchooser qttools5-dev-tools readline-common sensible-utils shared-mime-info ucf x11-common x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-s390x-linux-gnu gcc-12-doc gcc-12-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff isoquery glibc-doc:s390x libc-l10n:s390x locales:s390x libnss-nis:s390x libnss-nisplus:s390x manpages-dev:s390x cups-common cups-common:s390x rng-tools:s390x gnutls-bin:s390x krb5-doc:s390x krb5-user:s390x libvisual-0.4-plugins gstreamer1.0-tools cryptsetup-bin:s390x libthai0 libthai0:s390x qt5-image-formats-plugins qtwayland5 qt5-image-formats-plugins:s390x qtwayland5:s390x qt5-qmltooling-plugins lm-sensors lm-sensors:s390x libstdc++-11-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libwacom-bin libwacom-bin:s390x libx11-doc:s390x libxcb-doc:s390x libxext-doc:s390x libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python3.10-venv python3.10-doc binfmt-support qt5-doc default-libmysqlclient-dev:s390x firebird-dev:s390x libpq-dev:s390x libsqlite3-dev:s390x unixodbc-dev:s390x readline-doc Recommended packages: curl | wget | lynx libpam-cap dbus dbus:s390x libarchive-cpio-perl libglib2.0-data xdg-user-dirs libglib2.0-data:s390x xdg-user-dirs:s390x libgpg-error-l10n:s390x gstreamer1.0-plugins-base krb5-locales:s390x libgpm2 qttranslations5-l10n qttranslations5-l10n:s390x libqt5svg5 qt5-gtk-platformtheme libqt5svg5:s390x qt5-gtk-platformtheme:s390x geoclue-2.0 libqt5sql5-sqlite:s390x | libqt5sql5-mysql:s390x | libqt5sql5-odbc:s390x | libqt5sql5-psql:s390x | libqt5sql5-tds:s390x | libqt5sql5-ibase:s390x libltdl-dev uuid-runtime:s390x mesa-vulkan-drivers:s390x | vulkan-icd:s390x libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl libqt5opengl5-dev:s390x The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-12-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file fontconfig fontconfig-config fonts-dejavu-core g++-12-s390x-linux-gnu g++-s390x-linux-gnu gcc-11-base:s390x gcc-12-base:s390x gcc-12-cross-base gcc-12-s390x-linux-gnu gcc-12-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian iso-codes libarchive-zip-perl libasan6:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libavahi-client3 libavahi-client3:s390x libavahi-common-data libavahi-common-data:s390x libavahi-common3 libavahi-common3:s390x libblkid1:s390x libbrotli1 libbrotli1:s390x libbsd0 libbsd0:s390x libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcap2:s390x libcap2-bin libclang1-14 libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:s390x libcrypt1:s390x libcups2 libcups2:s390x libdbus-1-3 libdbus-1-3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdouble-conversion3 libdouble-conversion3:s390x libdrm-amdgpu1 libdrm-amdgpu1:s390x libdrm-common libdrm-nouveau2 libdrm-nouveau2:s390x libdrm-radeon1 libdrm-radeon1:s390x libdrm2 libdrm2:s390x libdw1 libedit2 libedit2:s390x libegl-dev:s390x libegl-mesa0 libegl-mesa0:s390x libegl1 libegl1:s390x libelf1 libelf1:s390x libevdev2 libevdev2:s390x libexpat1 libexpat1:s390x libffi8:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfontconfig1:s390x libfreetype6 libfreetype6:s390x libgbm1 libgbm1:s390x libgcc-11-dev:s390x libgcc-12-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgcrypt20:s390x libgl-dev:s390x libgl1 libgl1:s390x libgl1-mesa-dri libgl1-mesa-dri:s390x libglapi-mesa libglapi-mesa:s390x libglib2.0-0 libglib2.0-0:s390x libglu1-mesa:s390x libglu1-mesa-dev:s390x libglvnd0 libglvnd0:s390x libglx-dev:s390x libglx-mesa0 libglx-mesa0:s390x libglx0 libglx0:s390x libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgpg-error0:s390x libgraphite2-3 libgraphite2-3:s390x libgssapi-krb5-2:s390x libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libgudev-1.0-0:s390x libharfbuzz0b libharfbuzz0b:s390x libhogweed6:s390x libhyphen0 libice6 libice6:s390x libicu71 libicu71:s390x libidn2-0:s390x libinput-bin libinput10 libinput10:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libjpeg62-turbo libjpeg62-turbo:s390x libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libllvm14 libllvm14:s390x liblocale-gettext-perl liblz4-1:s390x liblzma5:s390x libmagic-mgc libmagic1 libmd0 libmd0:s390x libmd4c0 libmd4c0:s390x libmount1:s390x libmpdec3 libmtdev1 libmtdev1:s390x libncursesw6 libnettle8:s390x libnsl-dev:s390x libnsl2:s390x libopengl0:s390x liborc-0.4-0 libp11-kit0:s390x libpcre2-16-0 libpcre2-16-0:s390x libpcre2-8-0:s390x libpipeline1 libpng16-16 libpng16-16:s390x libpthread-stubs0-dev:s390x libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libqt5concurrent5:s390x libqt5core5a libqt5core5a:s390x libqt5dbus5 libqt5dbus5:s390x libqt5designer5 libqt5designercomponents5 libqt5gui5 libqt5gui5:s390x libqt5help5 libqt5network5 libqt5network5:s390x libqt5positioning5 libqt5printsupport5 libqt5printsupport5:s390x libqt5qml5 libqt5qmlmodels5 libqt5quick5 libqt5quickwidgets5 libqt5sensors5 libqt5sql5 libqt5sql5:s390x libqt5sql5-sqlite libqt5test5:s390x libqt5webchannel5 libqt5webkit5 libqt5widgets5 libqt5widgets5:s390x libqt5xml5 libqt5xml5:s390x libreadline8 libselinux1:s390x libsensors-config libsensors5 libsensors5:s390x libsm6 libsm6:s390x libsqlite3-0 libssl3:s390x libstdc++-11-dev:s390x libstdc++-12-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libsystemd0:s390x libtasn1-6:s390x libtinfo6:s390x libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libudev1:s390x libunistring2:s390x libunwind8 libuuid1:s390x libvulkan-dev:s390x libvulkan1:s390x libwacom-common libwacom9 libwacom9:s390x libwayland-client0 libwayland-client0:s390x libwayland-server0 libwayland-server0:s390x libwebp7 libwoff1 libx11-6 libx11-6:s390x libx11-data libx11-dev:s390x libx11-xcb1 libx11-xcb1:s390x libxau-dev:s390x libxau6 libxau6:s390x libxcb-dri2-0 libxcb-dri2-0:s390x libxcb-dri3-0 libxcb-dri3-0:s390x libxcb-glx0 libxcb-glx0:s390x libxcb-icccm4 libxcb-icccm4:s390x libxcb-image0 libxcb-image0:s390x libxcb-keysyms1 libxcb-keysyms1:s390x libxcb-present0 libxcb-present0:s390x libxcb-randr0 libxcb-randr0:s390x libxcb-render-util0 libxcb-render-util0:s390x libxcb-render0 libxcb-render0:s390x libxcb-shape0 libxcb-shape0:s390x libxcb-shm0 libxcb-shm0:s390x libxcb-sync1 libxcb-sync1:s390x libxcb-util1 libxcb-util1:s390x libxcb-xfixes0 libxcb-xfixes0:s390x libxcb-xinerama0 libxcb-xinerama0:s390x libxcb-xinput0 libxcb-xinput0:s390x libxcb-xkb1 libxcb-xkb1:s390x libxcb1 libxcb1:s390x libxcb1-dev:s390x libxdmcp-dev:s390x libxdmcp6 libxdmcp6:s390x libxext-dev:s390x libxext6 libxext6:s390x libxfixes3 libxfixes3:s390x libxkbcommon-x11-0 libxkbcommon-x11-0:s390x libxkbcommon0 libxkbcommon0:s390x libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxml2:s390x libxrender1 libxrender1:s390x libxshmfence1 libxshmfence1:s390x libxslt1.1 libxxf86vm1 libxxf86vm1:s390x libyaml-perl libz3-4 libz3-4:s390x libzstd1:s390x linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db media-types po-debconf python3 python3-minimal python3.10 python3.10-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant qt5-qmake:s390x qt5-qmake-bin qtattributionsscanner-qt5 qtbase5-dev:s390x qtbase5-dev-tools qtchooser qttools5-dev-tools readline-common sbuild-build-depends-main-dummy:s390x sensible-utils shared-mime-info ucf x11-common x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g:s390x 0 upgraded, 366 newly installed, 0 to remove and 0 not upgraded. Need to get 259 MB of archives. After this operation, 1059 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:3 http://localhost:3142/debian sid/main amd64 libglib2.0-0 amd64 2.73.3-3 [1461 kB] Get:4 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.187-2 [179 kB] Get:5 http://localhost:3142/debian sid/main amd64 libdw1 amd64 0.187-2 [240 kB] Get:6 http://localhost:3142/debian sid/main amd64 libunwind8 amd64 1.3.2-2 [54.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 libcap2-bin amd64 1:2.44-1 [32.6 kB] Get:8 http://localhost:3142/debian sid/main amd64 libgstreamer1.0-0 amd64 1.20.3-1 [2293 kB] Get:9 http://localhost:3142/debian sid/main amd64 liborc-0.4-0 amd64 1:0.4.32-2 [192 kB] Get:10 http://localhost:3142/debian sid/main amd64 iso-codes all 4.11.0-1 [2834 kB] Get:11 http://localhost:3142/debian sid/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.20.3-2 [2271 kB] Get:12 http://localhost:3142/debian sid/main amd64 libhyphen0 amd64 2.8.8-7 [32.5 kB] Get:13 http://localhost:3142/debian sid/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:14 http://localhost:3142/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.2-1 [164 kB] Get:15 http://localhost:3142/debian sid/main amd64 libpng16-16 amd64 1.6.37-5 [290 kB] Get:16 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:17 http://localhost:3142/debian sid/main amd64 shared-mime-info amd64 2.2-1 [729 kB] Get:18 http://localhost:3142/debian sid/main amd64 libdouble-conversion3 amd64 3.2.1-1 [41.5 kB] Get:19 http://localhost:3142/debian sid/main amd64 libpcre2-16-0 amd64 10.40-1 [243 kB] Get:20 http://localhost:3142/debian sid/main amd64 libqt5core5a amd64 5.15.4+dfsg-5 [1831 kB] Get:21 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.4.8-1 [109 kB] Get:22 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.0.9-2+b4 [275 kB] Get:23 http://localhost:3142/debian sid/main amd64 libfreetype6 amd64 2.12.1+dfsg-3 [420 kB] Get:24 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:26 http://localhost:3142/debian sid/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:27 http://localhost:3142/debian sid/main amd64 fontconfig-config all 2.13.1-4.4 [281 kB] Get:28 http://localhost:3142/debian sid/main amd64 libfontconfig1 amd64 2.13.1-4.4 [350 kB] Get:29 http://localhost:3142/debian sid/main amd64 fontconfig amd64 2.13.1-4.4 [417 kB] Get:30 http://localhost:3142/debian sid/main amd64 libdrm-common all 2.4.112-3 [15.6 kB] Get:31 http://localhost:3142/debian sid/main amd64 libdrm2 amd64 2.4.112-3 [45.8 kB] Get:32 http://localhost:3142/debian sid/main amd64 libglvnd0 amd64 1.5.0-1 [49.2 kB] Get:33 http://localhost:3142/debian sid/main amd64 libwayland-server0 amd64 1.21.0-1 [35.9 kB] Get:34 http://localhost:3142/debian sid/main amd64 libgbm1 amd64 22.2.0~rc3-1 [78.4 kB] Get:35 http://localhost:3142/debian sid/main amd64 libglapi-mesa amd64 22.2.0~rc3-1 [75.6 kB] Get:36 http://localhost:3142/debian sid/main amd64 libwayland-client0 amd64 1.21.0-1 [28.3 kB] Get:37 http://localhost:3142/debian sid/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:38 http://localhost:3142/debian sid/main amd64 libmd0 amd64 1.0.4-2 [29.5 kB] Get:39 http://localhost:3142/debian sid/main amd64 libbsd0 amd64 0.11.6-1 [114 kB] Get:40 http://localhost:3142/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:41 http://localhost:3142/debian sid/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:42 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.1-2 [308 kB] Get:43 http://localhost:3142/debian sid/main amd64 libx11-6 amd64 2:1.8.1-2 [772 kB] Get:44 http://localhost:3142/debian sid/main amd64 libx11-xcb1 amd64 2:1.8.1-2 [203 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxcb-dri2-0 amd64 1.15-1 [107 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxcb-dri3-0 amd64 1.15-1 [107 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxcb-present0 amd64 1.15-1 [105 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxcb-sync1 amd64 1.15-1 [109 kB] Get:49 http://localhost:3142/debian sid/main amd64 libxcb-xfixes0 amd64 1.15-1 [109 kB] Get:50 http://localhost:3142/debian sid/main amd64 libxshmfence1 amd64 1.3-1 [8820 B] Get:51 http://localhost:3142/debian sid/main amd64 libegl-mesa0 amd64 22.2.0~rc3-1 [148 kB] Get:52 http://localhost:3142/debian sid/main amd64 libegl1 amd64 1.5.0-1 [35.0 kB] Get:53 http://localhost:3142/debian sid/main amd64 libxcb-glx0 amd64 1.15-1 [122 kB] Get:54 http://localhost:3142/debian sid/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:55 http://localhost:3142/debian sid/main amd64 libxext6 amd64 2:1.3.4-1 [53.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libxfixes3 amd64 1:6.0.0-1 [22.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:58 http://localhost:3142/debian sid/main amd64 libdrm-amdgpu1 amd64 2.4.112-3 [29.6 kB] Get:59 http://localhost:3142/debian sid/main amd64 libdrm-nouveau2 amd64 2.4.112-3 [27.9 kB] Get:60 http://localhost:3142/debian sid/main amd64 libdrm-radeon1 amd64 2.4.112-3 [30.6 kB] Get:61 http://localhost:3142/debian sid/main amd64 libedit2 amd64 3.1-20210910-1 [97.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libz3-4 amd64 4.8.12-1+b1 [6997 kB] Get:63 http://localhost:3142/debian sid/main amd64 libllvm14 amd64 1:14.0.6-2 [21.9 MB] Get:64 http://localhost:3142/debian sid/main amd64 libsensors-config all 1:3.6.0-7 [32.3 kB] Get:65 http://localhost:3142/debian sid/main amd64 libsensors5 amd64 1:3.6.0-7 [52.3 kB] Get:66 http://localhost:3142/debian sid/main amd64 libgl1-mesa-dri amd64 22.2.0~rc3-1 [7116 kB] Get:67 http://localhost:3142/debian sid/main amd64 libglx-mesa0 amd64 22.2.0~rc3-1 [188 kB] Get:68 http://localhost:3142/debian sid/main amd64 libglx0 amd64 1.5.0-1 [35.7 kB] Get:69 http://localhost:3142/debian sid/main amd64 libgl1 amd64 1.5.0-1 [89.4 kB] Get:70 http://localhost:3142/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:71 http://localhost:3142/debian sid/main amd64 libharfbuzz0b amd64 2.7.4-1+b1 [1469 kB] Get:72 http://localhost:3142/debian sid/main amd64 x11-common all 1:7.7+23 [252 kB] Get:73 http://localhost:3142/debian sid/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:74 http://localhost:3142/debian sid/main amd64 libevdev2 amd64 1.13.0+dfsg-1 [34.0 kB] Get:75 http://localhost:3142/debian sid/main amd64 libmtdev1 amd64 1.1.6-1 [23.0 kB] Get:76 http://localhost:3142/debian sid/main amd64 libgudev-1.0-0 amd64 237-2 [15.1 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwacom-common all 2.4.0-3 [58.0 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwacom9 amd64 2.4.0-3 [22.5 kB] Get:79 http://localhost:3142/debian sid/main amd64 libinput-bin amd64 1.21.0-1 [26.2 kB] Get:80 http://localhost:3142/debian sid/main amd64 libinput10 amd64 1.21.0-1 [127 kB] Get:81 http://localhost:3142/debian sid/main amd64 libmd4c0 amd64 0.4.8-1 [44.2 kB] Get:82 http://localhost:3142/debian sid/main amd64 libdbus-1-3 amd64 1.14.0-2 [235 kB] Get:83 http://localhost:3142/debian sid/main amd64 libqt5dbus5 amd64 5.15.4+dfsg-5 [237 kB] Get:84 http://localhost:3142/debian sid/main amd64 libqt5network5 amd64 5.15.4+dfsg-5 [698 kB] Get:85 http://localhost:3142/debian sid/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 libxcb-icccm4 amd64 0.4.1-1.1 [27.4 kB] Get:87 http://localhost:3142/debian sid/main amd64 libxcb-util1 amd64 0.4.0-1+b1 [23.2 kB] Get:88 http://localhost:3142/debian sid/main amd64 libxcb-image0 amd64 0.4.0-2 [22.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b2 [16.4 kB] Get:90 http://localhost:3142/debian sid/main amd64 libxcb-randr0 amd64 1.15-1 [117 kB] Get:91 http://localhost:3142/debian sid/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:92 http://localhost:3142/debian sid/main amd64 libxcb-render-util0 amd64 0.3.9-1+b1 [18.3 kB] Get:93 http://localhost:3142/debian sid/main amd64 libxcb-shape0 amd64 1.15-1 [106 kB] Get:94 http://localhost:3142/debian sid/main amd64 libxcb-xinerama0 amd64 1.15-1 [105 kB] Get:95 http://localhost:3142/debian sid/main amd64 libxcb-xinput0 amd64 1.15-1 [130 kB] Get:96 http://localhost:3142/debian sid/main amd64 libxcb-xkb1 amd64 1.15-1 [129 kB] Get:97 http://localhost:3142/debian sid/main amd64 xkb-data all 2.35.1-1 [764 kB] Get:98 http://localhost:3142/debian sid/main amd64 libxkbcommon0 amd64 1.4.1-1 [108 kB] Get:99 http://localhost:3142/debian sid/main amd64 libxkbcommon-x11-0 amd64 1.4.1-1 [17.8 kB] Get:100 http://localhost:3142/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:101 http://localhost:3142/debian sid/main amd64 libqt5gui5 amd64 5.15.4+dfsg-5 [3430 kB] Get:102 http://localhost:3142/debian sid/main amd64 libqt5positioning5 amd64 5.15.4+dfsg-2 [207 kB] Get:103 http://localhost:3142/debian sid/main amd64 libavahi-common-data amd64 0.8-6 [124 kB] Get:104 http://localhost:3142/debian sid/main amd64 libavahi-common3 amd64 0.8-6 [58.7 kB] Get:105 http://localhost:3142/debian sid/main amd64 libavahi-client3 amd64 0.8-6 [62.6 kB] Get:106 http://localhost:3142/debian sid/main amd64 libcups2 amd64 2.4.2-1+b1 [349 kB] Get:107 http://localhost:3142/debian sid/main amd64 libqt5widgets5 amd64 5.15.4+dfsg-5 [2405 kB] Get:108 http://localhost:3142/debian sid/main amd64 libqt5printsupport5 amd64 5.15.4+dfsg-5 [227 kB] Get:109 http://localhost:3142/debian sid/main amd64 libqt5qml5 amd64 5.15.4+dfsg-4 [1348 kB] Get:110 http://localhost:3142/debian sid/main amd64 libqt5qmlmodels5 amd64 5.15.4+dfsg-4 [199 kB] Get:111 http://localhost:3142/debian sid/main amd64 libqt5quick5 amd64 5.15.4+dfsg-4 [1594 kB] Get:112 http://localhost:3142/debian sid/main amd64 libqt5sensors5 amd64 5.15.4-2 [115 kB] Get:113 http://localhost:3142/debian sid/main amd64 libqt5webchannel5 amd64 5.15.4-2 [59.3 kB] Get:114 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.39.3-1 [844 kB] Get:115 http://localhost:3142/debian sid/main amd64 libwebp7 amd64 1.2.2-2+b1 [277 kB] Get:116 http://localhost:3142/debian sid/main amd64 libwoff1 amd64 1.0.2-2 [43.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get:118 http://localhost:3142/debian sid/main amd64 libqt5webkit5 amd64 5.212.0~alpha4-21 [11.9 MB] Get:119 http://localhost:3142/debian sid/main amd64 libpython3.10-minimal amd64 3.10.7-1 [828 kB] Get:120 http://localhost:3142/debian sid/main amd64 python3.10-minimal amd64 3.10.7-1 [1994 kB] Get:121 http://localhost:3142/debian sid/main amd64 python3-minimal amd64 3.10.6-1 [38.7 kB] Get:122 http://localhost:3142/debian sid/main amd64 media-types all 8.0.0 [33.4 kB] Get:123 http://localhost:3142/debian sid/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:124 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.3+20220423-2 [133 kB] Get:125 http://localhost:3142/debian sid/main amd64 readline-common all 8.2~rc2-2 [75.8 kB] Get:126 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2~rc2-2 [173 kB] Get:127 http://localhost:3142/debian sid/main amd64 libpython3.10-stdlib amd64 3.10.7-1 [1685 kB] Get:128 http://localhost:3142/debian sid/main amd64 python3.10 amd64 3.10.7-1 [547 kB] Get:129 http://localhost:3142/debian sid/main amd64 libpython3-stdlib amd64 3.10.6-1 [21.7 kB] Get:130 http://localhost:3142/debian sid/main amd64 python3 amd64 3.10.6-1 [38.2 kB] Get:131 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:132 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:133 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:134 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-9 [175 kB] Get:135 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:136 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:137 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-1 [145 kB] Get:138 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.6-2 [39.4 kB] Get:139 http://localhost:3142/debian sid/main amd64 man-db amd64 2.10.2-3 [1413 kB] Get:140 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:141 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:142 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:143 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:144 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-9 [510 kB] Get:145 http://localhost:3142/debian sid/main amd64 binutils-s390x-linux-gnu amd64 2.38.90.20220713-2 [2389 kB] Get:146 http://localhost:3142/debian sid/main amd64 gcc-12-s390x-linux-gnu-base amd64 12.2.0-1cross1 [208 kB] Get:147 http://localhost:3142/debian sid/main amd64 cpp-12-s390x-linux-gnu amd64 12.2.0-1cross1 [7796 kB] Get:148 http://localhost:3142/debian sid/main amd64 cpp-s390x-linux-gnu amd64 4:12.2.0-1 [17.1 kB] Get:149 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:150 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-1cross1 [203 kB] Get:151 http://localhost:3142/debian sid/main amd64 libc6-s390x-cross all 2.34-3cross1 [1202 kB] Get:152 http://localhost:3142/debian sid/main amd64 libgcc-s1-s390x-cross all 12.2.0-1cross1 [25.1 kB] Get:153 http://localhost:3142/debian sid/main amd64 libgomp1-s390x-cross all 12.2.0-1cross1 [103 kB] Get:154 http://localhost:3142/debian sid/main amd64 libitm1-s390x-cross all 12.2.0-1cross1 [24.8 kB] Get:155 http://localhost:3142/debian sid/main amd64 libatomic1-s390x-cross all 12.2.0-1cross1 [7804 B] Get:156 http://localhost:3142/debian sid/main amd64 libasan8-s390x-cross all 12.2.0-1cross1 [2069 kB] Get:157 http://localhost:3142/debian sid/main amd64 libstdc++6-s390x-cross all 12.2.0-1cross1 [568 kB] Get:158 http://localhost:3142/debian sid/main amd64 libubsan1-s390x-cross all 12.2.0-1cross1 [850 kB] Get:159 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-s390x-cross all 12.2.0-1cross1 [715 kB] Get:160 http://localhost:3142/debian sid/main amd64 gcc-12-s390x-linux-gnu amd64 12.2.0-1cross1 [15.4 MB] Get:161 http://localhost:3142/debian sid/main amd64 gcc-s390x-linux-gnu amd64 4:12.2.0-1 [1448 B] Get:162 http://localhost:3142/debian sid/main amd64 linux-libc-dev-s390x-cross all 5.18.16-1cross1 [1736 kB] Get:163 http://localhost:3142/debian sid/main amd64 libc6-dev-s390x-cross all 2.34-3cross1 [1542 kB] Get:164 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-s390x-cross all 12.2.0-1cross1 [1997 kB] Get:165 http://localhost:3142/debian sid/main amd64 g++-12-s390x-linux-gnu amd64 12.2.0-1cross1 [8718 kB] Get:166 http://localhost:3142/debian sid/main amd64 g++-s390x-linux-gnu amd64 4:12.2.0-1 [1168 B] Get:167 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:168 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:169 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:170 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-2 [21.0 kB] Get:171 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:172 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:173 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:174 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:175 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:176 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-1 [17.3 kB] Get:177 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:178 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:179 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:180 http://localhost:3142/debian sid/main amd64 crossbuild-essential-s390x all 12.9 [6704 B] Get:181 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.9.1 [196 kB] Get:182 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-4 [526 kB] Get:183 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:184 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:185 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-3 [10.4 kB] Get:186 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:187 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:188 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:189 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-9 [1315 kB] Get:190 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:191 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:192 http://localhost:3142/debian sid/main amd64 debhelper all 13.9.1 [1071 kB] Get:193 http://localhost:3142/debian sid/main s390x gcc-11-base s390x 11.3.0-6 [209 kB] Get:194 http://localhost:3142/debian sid/main s390x gcc-12-base s390x 12.2.0-2 [208 kB] Get:195 http://localhost:3142/debian sid/main s390x libgcc-s1 s390x 12.2.0-2 [25.1 kB] Get:196 http://localhost:3142/debian sid/main s390x libc6 s390x 2.34-7 [2442 kB] Get:197 http://localhost:3142/debian sid/main s390x libasan6 s390x 11.3.0-6 [1927 kB] Get:198 http://localhost:3142/debian sid/main s390x libatomic1 s390x 12.2.0-2 [8056 B] Get:199 http://localhost:3142/debian sid/main s390x libavahi-common-data s390x 0.8-6 [124 kB] Get:200 http://localhost:3142/debian sid/main s390x libavahi-common3 s390x 0.8-6 [57.1 kB] Get:201 http://localhost:3142/debian sid/main s390x libcap2 s390x 1:2.44-1 [23.3 kB] Get:202 http://localhost:3142/debian sid/main s390x libgpg-error0 s390x 1.45-2 [78.6 kB] Get:203 http://localhost:3142/debian sid/main s390x libgcrypt20 s390x 1.10.1-2 [627 kB] Get:204 http://localhost:3142/debian sid/main s390x liblz4-1 s390x 1.9.4-1 [59.6 kB] Get:205 http://localhost:3142/debian sid/main s390x liblzma5 s390x 5.2.5-2.1 [166 kB] Get:206 http://localhost:3142/debian sid/main s390x libzstd1 s390x 1.5.2+dfsg-1 [244 kB] Get:207 http://localhost:3142/debian sid/main s390x libsystemd0 s390x 251.4-3 [380 kB] Get:208 http://localhost:3142/debian sid/main s390x libdbus-1-3 s390x 1.14.0-2 [226 kB] Get:209 http://localhost:3142/debian sid/main s390x libavahi-client3 s390x 0.8-6 [59.7 kB] Get:210 http://localhost:3142/debian sid/main s390x libblkid1 s390x 2.38.1-1 [192 kB] Get:211 http://localhost:3142/debian sid/main s390x libbrotli1 s390x 1.0.9-2+b4 [264 kB] Get:212 http://localhost:3142/debian sid/main s390x libmd0 s390x 1.0.4-2 [29.2 kB] Get:213 http://localhost:3142/debian sid/main s390x libbsd0 s390x 0.11.6-1 [113 kB] Get:214 http://localhost:3142/debian sid/main s390x linux-libc-dev s390x 5.19.6-1 [1623 kB] Get:215 http://localhost:3142/debian sid/main s390x libcrypt1 s390x 1:4.4.28-2 [90.1 kB] Get:216 http://localhost:3142/debian sid/main s390x libcrypt-dev s390x 1:4.4.28-2 [118 kB] Get:217 http://localhost:3142/debian sid/main s390x libcom-err2 s390x 1.46.5-2 [75.5 kB] Get:218 http://localhost:3142/debian sid/main s390x libkrb5support0 s390x 1.20-1 [64.8 kB] Get:219 http://localhost:3142/debian sid/main s390x libk5crypto3 s390x 1.20-1 [110 kB] Get:220 http://localhost:3142/debian sid/main s390x libkeyutils1 s390x 1.6.3-1 [15.4 kB] Get:221 http://localhost:3142/debian sid/main s390x libssl3 s390x 3.0.5-2 [1634 kB] Get:222 http://localhost:3142/debian sid/main s390x libkrb5-3 s390x 1.20-1 [342 kB] Get:223 http://localhost:3142/debian sid/main s390x libgssapi-krb5-2 s390x 1.20-1 [155 kB] Get:224 http://localhost:3142/debian sid/main s390x libtirpc3 s390x 1.3.3+ds-1 [78.4 kB] Get:225 http://localhost:3142/debian sid/main s390x libnsl2 s390x 1.3.0-2 [37.3 kB] Get:226 http://localhost:3142/debian sid/main s390x libtirpc-dev s390x 1.3.3+ds-1 [185 kB] Get:227 http://localhost:3142/debian sid/main s390x libnsl-dev s390x 1.3.0-2 [64.6 kB] Get:228 http://localhost:3142/debian sid/main s390x libc6-dev s390x 2.34-7 [1568 kB] Get:229 http://localhost:3142/debian sid/main amd64 libclang1-14 amd64 1:14.0.6-2 [6179 kB] Get:230 http://localhost:3142/debian sid/main s390x libgmp10 s390x 2:6.2.1+dfsg1-1 [551 kB] Get:231 http://localhost:3142/debian sid/main s390x libnettle8 s390x 3.8.1-2 [297 kB] Get:232 http://localhost:3142/debian sid/main s390x libhogweed6 s390x 3.8.1-2 [325 kB] Get:233 http://localhost:3142/debian sid/main s390x libunistring2 s390x 1.0-1 [409 kB] Get:234 http://localhost:3142/debian sid/main s390x libidn2-0 s390x 2.3.3-1+b1 [121 kB] Get:235 http://localhost:3142/debian sid/main s390x libffi8 s390x 3.4.2-4 [21.4 kB] Get:236 http://localhost:3142/debian sid/main s390x libp11-kit0 s390x 0.24.1-1 [345 kB] Get:237 http://localhost:3142/debian sid/main s390x libtasn1-6 s390x 4.18.0-4 [53.8 kB] Get:238 http://localhost:3142/debian sid/main s390x libgnutls30 s390x 3.7.7-2 [1294 kB] Get:239 http://localhost:3142/debian sid/main s390x zlib1g s390x 1:1.2.11.dfsg-4.1 [89.4 kB] Get:240 http://localhost:3142/debian sid/main s390x libcups2 s390x 2.4.2-1+b1 [327 kB] Get:241 http://localhost:3142/debian sid/main s390x libstdc++6 s390x 12.2.0-2 [614 kB] Get:242 http://localhost:3142/debian sid/main s390x libdouble-conversion3 s390x 3.2.1-1 [39.8 kB] Get:243 http://localhost:3142/debian sid/main s390x libdrm2 s390x 2.4.112-3 [43.1 kB] Get:244 http://localhost:3142/debian sid/main s390x libdrm-amdgpu1 s390x 2.4.112-3 [28.7 kB] Get:245 http://localhost:3142/debian sid/main s390x libdrm-nouveau2 s390x 2.4.112-3 [26.9 kB] Get:246 http://localhost:3142/debian sid/main s390x libdrm-radeon1 s390x 2.4.112-3 [30.3 kB] Get:247 http://localhost:3142/debian sid/main s390x libtinfo6 s390x 6.3+20220423-2 [346 kB] Get:248 http://localhost:3142/debian sid/main s390x libedit2 s390x 3.1-20210910-1 [92.3 kB] Get:249 http://localhost:3142/debian sid/main s390x libglvnd0 s390x 1.5.0-1 [80.4 kB] Get:250 http://localhost:3142/debian sid/main s390x libexpat1 s390x 2.4.8-1 [101 kB] Get:251 http://localhost:3142/debian sid/main s390x libwayland-server0 s390x 1.21.0-1 [34.2 kB] Get:252 http://localhost:3142/debian sid/main s390x libgbm1 s390x 22.2.0~rc3-1 [77.4 kB] Get:253 http://localhost:3142/debian sid/main s390x libglapi-mesa s390x 22.2.0~rc3-1 [99.4 kB] Get:254 http://localhost:3142/debian sid/main s390x libwayland-client0 s390x 1.21.0-1 [27.1 kB] Get:255 http://localhost:3142/debian sid/main s390x libxau6 s390x 1:1.0.9-1 [19.5 kB] Get:256 http://localhost:3142/debian sid/main s390x libxdmcp6 s390x 1:1.1.2-3 [26.5 kB] Get:257 http://localhost:3142/debian sid/main s390x libxcb1 s390x 1.15-1 [142 kB] Get:258 http://localhost:3142/debian sid/main s390x libx11-6 s390x 2:1.8.1-2 [744 kB] Get:259 http://localhost:3142/debian sid/main s390x libx11-xcb1 s390x 2:1.8.1-2 [203 kB] Get:260 http://localhost:3142/debian sid/main s390x libxcb-dri2-0 s390x 1.15-1 [107 kB] Get:261 http://localhost:3142/debian sid/main s390x libxcb-dri3-0 s390x 1.15-1 [107 kB] Get:262 http://localhost:3142/debian sid/main s390x libxcb-present0 s390x 1.15-1 [105 kB] Get:263 http://localhost:3142/debian sid/main s390x libxcb-sync1 s390x 1.15-1 [109 kB] Get:264 http://localhost:3142/debian sid/main s390x libxcb-xfixes0 s390x 1.15-1 [109 kB] Get:265 http://localhost:3142/debian sid/main s390x libxshmfence1 s390x 1.3-1 [8840 B] Get:266 http://localhost:3142/debian sid/main s390x libegl-mesa0 s390x 22.2.0~rc3-1 [141 kB] Get:267 http://localhost:3142/debian sid/main s390x libegl1 s390x 1.5.0-1 [33.0 kB] Get:268 http://localhost:3142/debian sid/main s390x libxcb-glx0 s390x 1.15-1 [122 kB] Get:269 http://localhost:3142/debian sid/main s390x libxcb-shm0 s390x 1.15-1 [105 kB] Get:270 http://localhost:3142/debian sid/main s390x libxext6 s390x 2:1.3.4-1 [51.3 kB] Get:271 http://localhost:3142/debian sid/main s390x libxfixes3 s390x 1:6.0.0-1 [21.8 kB] Get:272 http://localhost:3142/debian sid/main s390x libxxf86vm1 s390x 1:1.1.4-1+b2 [20.4 kB] Get:273 http://localhost:3142/debian sid/main s390x libelf1 s390x 0.187-2 [176 kB] Get:274 http://localhost:3142/debian sid/main s390x libicu71 s390x 71.1-3 [8921 kB] Get:275 http://localhost:3142/debian sid/main s390x libxml2 s390x 2.9.14+dfsg-1+b1 [624 kB] Get:276 http://localhost:3142/debian sid/main s390x libz3-4 s390x 4.8.12-1+b1 [6297 kB] Get:277 http://localhost:3142/debian sid/main s390x libllvm14 s390x 1:14.0.6-2 [24.0 MB] Get:278 http://localhost:3142/debian sid/main s390x libsensors5 s390x 1:3.6.0-7 [50.7 kB] Get:279 http://localhost:3142/debian sid/main s390x libgl1-mesa-dri s390x 22.2.0~rc3-1 [4672 kB] Get:280 http://localhost:3142/debian sid/main s390x libglx-mesa0 s390x 22.2.0~rc3-1 [189 kB] Get:281 http://localhost:3142/debian sid/main s390x libglx0 s390x 1.5.0-1 [28.3 kB] Get:282 http://localhost:3142/debian sid/main s390x libgl1 s390x 1.5.0-1 [125 kB] Get:283 http://localhost:3142/debian sid/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:284 http://localhost:3142/debian sid/main amd64 x11proto-dev all 2022.1-1 [599 kB] Get:285 http://localhost:3142/debian sid/main s390x libxau-dev s390x 1:1.0.9-1 [22.8 kB] Get:286 http://localhost:3142/debian sid/main s390x libxdmcp-dev s390x 1:1.1.2-3 [42.3 kB] Get:287 http://localhost:3142/debian sid/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:288 http://localhost:3142/debian sid/main s390x libpthread-stubs0-dev s390x 0.4-1 [5344 B] Get:289 http://localhost:3142/debian sid/main s390x libxcb1-dev s390x 1.15-1 [179 kB] Get:290 http://localhost:3142/debian sid/main s390x libx11-dev s390x 2:1.8.1-2 [812 kB] Get:291 http://localhost:3142/debian sid/main s390x libglx-dev s390x 1.5.0-1 [16.7 kB] Get:292 http://localhost:3142/debian sid/main s390x libgl-dev s390x 1.5.0-1 [101 kB] Get:293 http://localhost:3142/debian sid/main s390x libegl-dev s390x 1.5.0-1 [20.4 kB] Get:294 http://localhost:3142/debian sid/main s390x libevdev2 s390x 1.13.0+dfsg-1 [32.6 kB] Get:295 http://localhost:3142/debian sid/main s390x libpng16-16 s390x 1.6.37-5 [284 kB] Get:296 http://localhost:3142/debian sid/main s390x libfreetype6 s390x 2.12.1+dfsg-3 [395 kB] Get:297 http://localhost:3142/debian sid/main s390x libuuid1 s390x 2.38.1-1 [85.6 kB] Get:298 http://localhost:3142/debian sid/main s390x libfontconfig1 s390x 2.13.1-4.4 [343 kB] Get:299 http://localhost:3142/debian sid/main s390x libgomp1 s390x 12.2.0-2 [105 kB] Get:300 http://localhost:3142/debian sid/main s390x libitm1 s390x 12.2.0-2 [25.2 kB] Get:301 http://localhost:3142/debian sid/main s390x libubsan1 s390x 12.2.0-2 [851 kB] Get:302 http://localhost:3142/debian sid/main s390x libgcc-11-dev s390x 11.3.0-6 [691 kB] Get:303 http://localhost:3142/debian sid/main s390x libpcre2-8-0 s390x 10.40-1 [232 kB] Get:304 http://localhost:3142/debian sid/main s390x libselinux1 s390x 3.4-1+b1 [87.3 kB] Get:305 http://localhost:3142/debian sid/main s390x libmount1 s390x 2.38.1-1 [208 kB] Get:306 http://localhost:3142/debian sid/main s390x libglib2.0-0 s390x 2.73.3-3 [1342 kB] Get:307 http://localhost:3142/debian sid/main s390x libopengl0 s390x 1.5.0-1 [44.3 kB] Get:308 http://localhost:3142/debian sid/main s390x libglu1-mesa s390x 9.0.2-1 [157 kB] Get:309 http://localhost:3142/debian sid/main s390x libglu1-mesa-dev s390x 9.0.2-1 [193 kB] Get:310 http://localhost:3142/debian sid/main s390x libgraphite2-3 s390x 1.3.14-1 [74.4 kB] Get:311 http://localhost:3142/debian sid/main s390x libudev1 s390x 251.4-3 [176 kB] Get:312 http://localhost:3142/debian sid/main s390x libgudev-1.0-0 s390x 237-2 [14.2 kB] Get:313 http://localhost:3142/debian sid/main s390x libharfbuzz0b s390x 2.7.4-1+b1 [1439 kB] Get:314 http://localhost:3142/debian sid/main s390x libice6 s390x 2:1.0.10-1 [54.8 kB] Get:315 http://localhost:3142/debian sid/main s390x libmtdev1 s390x 1.1.6-1 [22.8 kB] Get:316 http://localhost:3142/debian sid/main s390x libwacom9 s390x 2.4.0-3 [21.3 kB] Get:317 http://localhost:3142/debian sid/main s390x libinput10 s390x 1.21.0-1 [112 kB] Get:318 http://localhost:3142/debian sid/main s390x libjpeg62-turbo s390x 1:2.1.2-1 [147 kB] Get:319 http://localhost:3142/debian sid/main s390x libmd4c0 s390x 0.4.8-1 [43.9 kB] Get:320 http://localhost:3142/debian sid/main s390x libpcre2-16-0 s390x 10.40-1 [220 kB] Get:321 http://localhost:3142/debian sid/main s390x libqt5core5a s390x 5.15.4+dfsg-5 [1720 kB] Get:322 http://localhost:3142/debian sid/main s390x libqt5concurrent5 s390x 5.15.4+dfsg-5 [66.8 kB] Get:323 http://localhost:3142/debian sid/main s390x libqt5dbus5 s390x 5.15.4+dfsg-5 [222 kB] Get:324 http://localhost:3142/debian sid/main amd64 libqt5xml5 amd64 5.15.4+dfsg-5 [147 kB] Get:325 http://localhost:3142/debian sid/main amd64 libqt5designer5 amd64 5.15.4-2+b1 [2757 kB] Get:326 http://localhost:3142/debian sid/main amd64 libqt5designercomponents5 amd64 5.15.4-2+b1 [738 kB] Get:327 http://localhost:3142/debian sid/main s390x libqt5network5 s390x 5.15.4+dfsg-5 [638 kB] Get:328 http://localhost:3142/debian sid/main s390x libsm6 s390x 2:1.2.3-1 [34.2 kB] Get:329 http://localhost:3142/debian sid/main s390x libxcb-icccm4 s390x 0.4.1-1.1 [27.3 kB] Get:330 http://localhost:3142/debian sid/main s390x libxcb-util1 s390x 0.4.0-1+b1 [23.1 kB] Get:331 http://localhost:3142/debian sid/main s390x libxcb-image0 s390x 0.4.0-2 [23.1 kB] Get:332 http://localhost:3142/debian sid/main s390x libxcb-keysyms1 s390x 0.4.0-1+b2 [16.5 kB] Get:333 http://localhost:3142/debian sid/main s390x libxcb-randr0 s390x 1.15-1 [117 kB] Get:334 http://localhost:3142/debian sid/main s390x libxcb-render0 s390x 1.15-1 [115 kB] Get:335 http://localhost:3142/debian sid/main s390x libxcb-render-util0 s390x 0.3.9-1+b1 [18.1 kB] Get:336 http://localhost:3142/debian sid/main s390x libxcb-shape0 s390x 1.15-1 [106 kB] Get:337 http://localhost:3142/debian sid/main s390x libxcb-xinerama0 s390x 1.15-1 [105 kB] Get:338 http://localhost:3142/debian sid/main s390x libxcb-xinput0 s390x 1.15-1 [130 kB] Get:339 http://localhost:3142/debian sid/main s390x libxcb-xkb1 s390x 1.15-1 [128 kB] Get:340 http://localhost:3142/debian sid/main s390x libxkbcommon0 s390x 1.4.1-1 [101 kB] Get:341 http://localhost:3142/debian sid/main s390x libxkbcommon-x11-0 s390x 1.4.1-1 [17.1 kB] Get:342 http://localhost:3142/debian sid/main s390x libxrender1 s390x 1:0.9.10-1.1 [32.0 kB] Get:343 http://localhost:3142/debian sid/main s390x libqt5gui5 s390x 5.15.4+dfsg-5 [2988 kB] Get:344 http://localhost:3142/debian sid/main amd64 libqt5sql5 amd64 5.15.4+dfsg-5 [147 kB] Get:345 http://localhost:3142/debian sid/main amd64 libqt5help5 amd64 5.15.4-2+b1 [156 kB] Get:346 http://localhost:3142/debian sid/main s390x libqt5widgets5 s390x 5.15.4+dfsg-5 [2260 kB] Get:347 http://localhost:3142/debian sid/main s390x libqt5printsupport5 s390x 5.15.4+dfsg-5 [217 kB] Get:348 http://localhost:3142/debian sid/main amd64 libqt5quickwidgets5 amd64 5.15.4+dfsg-4 [49.5 kB] Get:349 http://localhost:3142/debian sid/main s390x libqt5sql5 s390x 5.15.4+dfsg-5 [140 kB] Get:350 http://localhost:3142/debian sid/main amd64 libqt5sql5-sqlite amd64 5.15.4+dfsg-5 [82.0 kB] Get:351 http://localhost:3142/debian sid/main s390x libqt5test5 s390x 5.15.4+dfsg-5 [160 kB] Get:352 http://localhost:3142/debian sid/main s390x libqt5xml5 s390x 5.15.4+dfsg-5 [141 kB] Get:353 http://localhost:3142/debian sid/main s390x libstdc++-11-dev s390x 11.3.0-6 [1929 kB] Get:354 http://localhost:3142/debian sid/main s390x libvulkan1 s390x 1.3.224.0-1 [107 kB] Get:355 http://localhost:3142/debian sid/main s390x libvulkan-dev s390x 1.3.224.0-1 [981 kB] Get:356 http://localhost:3142/debian sid/main s390x libxext-dev s390x 2:1.3.4-1 [105 kB] Get:357 http://localhost:3142/debian sid/main amd64 qtchooser amd64 66-2 [26.3 kB] Get:358 http://localhost:3142/debian sid/main amd64 qdoc-qt5 amd64 5.15.4-2+b1 [597 kB] Get:359 http://localhost:3142/debian sid/main amd64 qhelpgenerator-qt5 amd64 5.15.4-2+b1 [65.3 kB] Get:360 http://localhost:3142/debian sid/main amd64 qt5-assistant amd64 5.15.4-2+b1 [357 kB] Get:361 http://localhost:3142/debian sid/main amd64 qt5-qmake-bin amd64 5.15.4+dfsg-5 [1045 kB] Get:362 http://localhost:3142/debian sid/main s390x qt5-qmake s390x 5.15.4+dfsg-5 [246 kB] Get:363 http://localhost:3142/debian sid/main amd64 qtattributionsscanner-qt5 amd64 5.15.4-2+b1 [38.5 kB] Get:364 http://localhost:3142/debian sid/main amd64 qtbase5-dev-tools amd64 5.15.4+dfsg-5 [781 kB] Get:365 http://localhost:3142/debian sid/main s390x qtbase5-dev s390x 5.15.4+dfsg-5 [1138 kB] Get:366 http://localhost:3142/debian sid/main amd64 qttools5-dev-tools amd64 5.15.4-2+b1 [1036 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 259 MB in 1s (194 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 13607 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../001-libglib2.0-0_2.73.3-3_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.73.3-3) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../002-libelf1_0.187-2_amd64.deb ... Unpacking libelf1:amd64 (0.187-2) ... Selecting previously unselected package libdw1:amd64. Preparing to unpack .../003-libdw1_0.187-2_amd64.deb ... Unpacking libdw1:amd64 (0.187-2) ... Selecting previously unselected package libunwind8:amd64. Preparing to unpack .../004-libunwind8_1.3.2-2_amd64.deb ... Unpacking libunwind8:amd64 (1.3.2-2) ... Selecting previously unselected package libcap2-bin. Preparing to unpack .../005-libcap2-bin_1%3a2.44-1_amd64.deb ... Unpacking libcap2-bin (1:2.44-1) ... 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Setting up libqt5core5a:amd64 (5.15.4+dfsg-5) ... Setting up libxcb-dri2-0:amd64 (1.15-1) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up libllvm14:amd64 (1:14.0.6-2) ... Setting up libdrm2:amd64 (2.4.112-3) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up libqt5dbus5:amd64 (5.15.4+dfsg-5) ... Setting up libxcb-randr0:amd64 (1.15-1) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up libx11-6:amd64 (2:1.8.1-2) ... Setting up libharfbuzz0b:amd64 (2.7.4-1+b1) ... Setting up libqt5sensors5:amd64 (5.15.4-2) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.8-6) ... Setting up libgstreamer1.0-0:amd64 (1.20.3-1) ... Setcap worked! gst-ptp-helper is not suid! Setting up libpython3-stdlib:amd64 (3.10.6-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.112-3) ... Setting up libxcb-dri3-0:amd64 (1.15-1) ... Setting up libinput10:amd64 (1.21.0-1) ... Setting up libx11-xcb1:amd64 (2:1.8.1-2) ... Setting up libdrm-nouveau2:amd64 (2.4.112-3) ... Setting up libubsan1-s390x-cross (12.2.0-1cross1) ... Setting up python3.10 (3.10.7-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libgbm1:amd64 (22.2.0~rc3-1) ... Setting up libdrm-radeon1:amd64 (2.4.112-3) ... Setting up fontconfig-config (2.13.1-4.4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libqt5positioning5:amd64 (5.15.4+dfsg-2) ... Setting up libgl1-mesa-dri:amd64 (22.2.0~rc3-1) ... Setting up libxext6:amd64 (2:1.3.4-1) ... Setting up libclang1-14 (1:14.0.6-2) ... Setting up libgstreamer-plugins-base1.0-0:amd64 (1.20.3-2) ... Setting up python3 (3.10.6-1) ... Setting up man-db (2.10.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... egrep: warning: egrep is obsolescent; using grep -E egrep: warning: egrep is obsolescent; using grep -E update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Setting up libqt5network5:amd64 (5.15.4+dfsg-5) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libqt5sql5:amd64 (5.15.4+dfsg-5) ... Setting up qtbase5-dev-tools (5.15.4+dfsg-5) ... Setting up libqt5xml5:amd64 (5.15.4+dfsg-5) ... Setting up libegl-mesa0:amd64 (22.2.0~rc3-1) ... Setting up libxfixes3:amd64 (1:6.0.0-1) ... Setting up libqt5qml5:amd64 (5.15.4+dfsg-4) ... Setting up qtattributionsscanner-qt5 (5.15.4-2+b1) ... Setting up libqt5webchannel5:amd64 (5.15.4-2) ... Setting up libgcc-12-dev-s390x-cross (12.2.0-1cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version egrep: warning: egrep is obsolescent; using grep -E grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Setting up libcups2:amd64 (2.4.2-1+b1) ... Setting up libegl1:amd64 (1.5.0-1) ... Setting up libfontconfig1:amd64 (2.13.1-4.4) ... Setting up fontconfig (2.13.1-4.4) ... Regenerating fonts cache... done. Setting up libqt5qmlmodels5:amd64 (5.15.4+dfsg-4) ... Setting up libstdc++-12-dev-s390x-cross (12.2.0-1cross1) ... Setting up libglx-mesa0:amd64 (22.2.0~rc3-1) ... Setting up libqt5sql5-sqlite:amd64 (5.15.4+dfsg-5) ... Setting up libglx0:amd64 (1.5.0-1) ... Setting up qdoc-qt5 (5.15.4-2+b1) ... Setting up debhelper (13.9.1) ... Setting up gcc-12-s390x-linux-gnu (12.2.0-1cross1) ... Setting up libgl1:amd64 (1.5.0-1) ... Setting up gcc-s390x-linux-gnu (4:12.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-12-s390x-linux-gnu (12.2.0-1cross1) ... Setting up libqt5gui5:amd64 (5.15.4+dfsg-5) ... Setting up g++-s390x-linux-gnu (4:12.2.0-1) ... Setting up libqt5widgets5:amd64 (5.15.4+dfsg-5) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libqt5help5:amd64 (5.15.4-2+b1) ... Setting up libqt5printsupport5:amd64 (5.15.4+dfsg-5) ... Setting up libqt5quick5:amd64 (5.15.4+dfsg-4) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up libqt5designer5:amd64 (5.15.4-2+b1) ... Setting up qhelpgenerator-qt5 (5.15.4-2+b1) ... Setting up libqt5webkit5:amd64 (5.212.0~alpha4-21) ... Setting up libqt5designercomponents5:amd64 (5.15.4-2+b1) ... Setting up libqt5quickwidgets5:amd64 (5.15.4+dfsg-4) ... Setting up qt5-assistant (5.15.4-2+b1) ... Setting up qttools5-dev-tools (5.15.4-2+b1) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-s390x (12.9) ... Setting up libgcc-s1:s390x (12.2.0-2) ... Setting up libc6:s390x (2.34-7) ... Setting up libudev1:s390x (251.4-3) ... Setting up libffi8:s390x (3.4.2-4) ... Setting up libdrm2:s390x (2.4.112-3) ... Setting up libmd0:s390x (1.0.4-2) ... Setting up libxshmfence1:s390x (1.3-1) ... Setting up libtasn1-6:s390x (4.18.0-4) ... Setting up libmd4c0:s390x (0.4.8-1) ... Setting up libbsd0:s390x (0.11.6-1) ... Setting up libevdev2:s390x (1.13.0+dfsg-1) ... Setting up libblkid1:s390x (2.38.1-1) ... Setting up libstdc++6:s390x (12.2.0-2) ... Setting up libitm1:s390x (12.2.0-2) ... Setting up libtinfo6:s390x (6.3+20220423-2) ... Setting up libdrm-amdgpu1:s390x (2.4.112-3) ... Setting up libxkbcommon0:s390x (1.4.1-1) ... Setting up libwayland-client0:s390x (1.21.0-1) ... Setting up libexpat1:s390x (2.4.8-1) ... Setting up libgraphite2-3:s390x (1.3.14-1) ... Setting up libicu71:s390x (71.1-3) ... Setting up libwayland-server0:s390x (1.21.0-1) ... Setting up libzstd1:s390x (1.5.2+dfsg-1) ... Setting up libice6:s390x (2:1.0.10-1) ... Setting up libxau6:s390x (1:1.0.9-1) ... Setting up libxdmcp6:s390x (1:1.1.2-3) ... Setting up libdouble-conversion3:s390x (3.2.1-1) ... Setting up libkeyutils1:s390x (1.6.3-1) ... Setting up libdrm-nouveau2:s390x (2.4.112-3) ... Setting up libxcb1:s390x (1.15-1) ... Setting up libxcb-xfixes0:s390x (1.15-1) ... Setting up libxau-dev:s390x (1:1.0.9-1) ... Setting up liblzma5:s390x (5.2.5-2.1) ... Setting up libgpg-error0:s390x (1.45-2) ... Setting up libxcb-xinput0:s390x (1.15-1) ... Setting up libgbm1:s390x (22.2.0~rc3-1) ... Setting up libxcb-render0:s390x (1.15-1) ... Setting up libdrm-radeon1:s390x (2.4.112-3) ... Setting up liblz4-1:s390x (1.9.4-1) ... Setting up libglvnd0:s390x (1.5.0-1) ... Setting up libxcb-glx0:s390x (1.15-1) ... Setting up libbrotli1:s390x (1.0.9-2+b4) ... Setting up libedit2:s390x (3.1-20210910-1) ... Setting up libxcb-keysyms1:s390x (0.4.0-1+b2) ... Setting up libxcb-shape0:s390x (1.15-1) ... Setting up libavahi-common3:s390x (0.8-6) ... Setting up libssl3:s390x (3.0.5-2) ... Setting up libunistring2:s390x (1.0-1) ... Setting up libgcrypt20:s390x (1.10.1-2) ... Setting up libxcb-render-util0:s390x (0.3.9-1+b1) ... Setting up zlib1g:s390x (1:1.2.11.dfsg-4.1) ... Setting up libcrypt1:s390x (1:4.4.28-2) ... Setting up libidn2-0:s390x (2.3.3-1+b1) ... Setting up libxcb-shm0:s390x (1.15-1) ... Setting up libxcb-icccm4:s390x (0.4.1-1.1) ... Setting up libcom-err2:s390x (1.46.5-2) ... Setting up libgomp1:s390x (12.2.0-2) ... Setting up libpcre2-16-0:s390x (10.40-1) ... Setting up libcap2:s390x (1:2.44-1) ... Setting up libopengl0:s390x (1.5.0-1) ... Setting up libasan6:s390x (11.3.0-6) ... Setting up libxcb-util1:s390x (0.4.0-1+b1) ... Setting up libxcb-xkb1:s390x (1.15-1) ... Setting up libxcb-image0:s390x (0.4.0-2) ... Setting up libkrb5support0:s390x (1.20-1) ... Setting up libxcb-present0:s390x (1.15-1) ... Setting up libxdmcp-dev:s390x (1:1.1.2-3) ... Setting up libz3-4:s390x (4.8.12-1+b1) ... Setting up libxcb-xinerama0:s390x (1.15-1) ... Setting up libjpeg62-turbo:s390x (1:2.1.2-1) ... Setting up libnettle8:s390x (3.8.1-2) ... Setting up libxcb-sync1:s390x (1.15-1) ... Setting up libgmp10:s390x (2:6.2.1+dfsg1-1) ... Setting up libp11-kit0:s390x (0.24.1-1) ... Setting up libxkbcommon-x11-0:s390x (1.4.1-1) ... Setting up libpng16-16:s390x (1.6.37-5) ... Setting up libatomic1:s390x (12.2.0-2) ... Setting up libuuid1:s390x (2.38.1-1) ... Setting up libsensors5:s390x (1:3.6.0-7) ... Setting up libpcre2-8-0:s390x (10.40-1) ... Setting up libk5crypto3:s390x (1.20-1) ... Setting up libglapi-mesa:s390x (22.2.0~rc3-1) ... Setting up libmtdev1:s390x (1.1.6-1) ... Setting up libvulkan1:s390x (1.3.224.0-1) ... Setting up libubsan1:s390x (12.2.0-2) ... Setting up libxcb-dri2-0:s390x (1.15-1) ... Setting up libgcc-11-dev:s390x (11.3.0-6) ... Setting up libcrypt-dev:s390x (1:4.4.28-2) ... Setting up libxcb-randr0:s390x (1.15-1) ... Setting up libx11-6:s390x (2:1.8.1-2) ... Setting up libkrb5-3:s390x (1.20-1) ... Setting up libglu1-mesa:s390x (9.0.2-1) ... Setting up libelf1:s390x (0.187-2) ... Setting up libsm6:s390x (2:1.2.3-1) ... Setting up libxml2:s390x (2.9.14+dfsg-1+b1) ... Setting up libxcb-dri3-0:s390x (1.15-1) ... Setting up libx11-xcb1:s390x (2:1.8.1-2) ... Setting up libvulkan-dev:s390x (1.3.224.0-1) ... Setting up libhogweed6:s390x (3.8.1-2) ... Setting up libxcb1-dev:s390x (1.15-1) ... Setting up libxrender1:s390x (1:0.9.10-1.1) ... Setting up libx11-dev:s390x (2:1.8.1-2) ... Setting up libxext6:s390x (2:1.3.4-1) ... Setting up libsystemd0:s390x (251.4-3) ... Setting up libxxf86vm1:s390x (1:1.1.4-1+b2) ... Setting up libselinux1:s390x (3.4-1+b1) ... Setting up libegl-mesa0:s390x (22.2.0~rc3-1) ... Setting up libgnutls30:s390x (3.7.7-2) ... Setting up libfreetype6:s390x (2.12.1+dfsg-3) ... Setting up libxfixes3:s390x (1:6.0.0-1) ... Setting up libdbus-1-3:s390x (1.14.0-2) ... Setting up libgssapi-krb5-2:s390x (1.20-1) ... Setting up libxext-dev:s390x (2:1.3.4-1) ... Setting up libllvm14:s390x (1:14.0.6-2) ... Setting up libmount1:s390x (2.38.1-1) ... Setting up libegl1:s390x (1.5.0-1) ... Setting up libfontconfig1:s390x (2.13.1-4.4) ... Setting up libavahi-client3:s390x (0.8-6) ... Setting up libtirpc3:s390x (1.3.3+ds-1) ... Setting up libglib2.0-0:s390x (2.73.3-3) ... /var/lib/dpkg/info/libglib2.0-0:s390x.postinst: 42: /usr/lib/s390x-linux-gnu/glib-2.0/glib-compile-schemas: Exec format error /var/lib/dpkg/info/libglib2.0-0:s390x.postinst: 43: /usr/lib/s390x-linux-gnu/glib-2.0/gio-querymodules: Exec format error Setting up libgl1-mesa-dri:s390x (22.2.0~rc3-1) ... Setting up libtirpc-dev:s390x (1.3.3+ds-1) ... Setting up libqt5core5a:s390x (5.15.4+dfsg-5) ... Setting up libcups2:s390x (2.4.2-1+b1) ... Setting up libqt5dbus5:s390x (5.15.4+dfsg-5) ... Setting up libnsl2:s390x (1.3.0-2) ... Setting up libharfbuzz0b:s390x (2.7.4-1+b1) ... Setting up libqt5test5:s390x (5.15.4+dfsg-5) ... Setting up libqt5concurrent5:s390x (5.15.4+dfsg-5) ... Setting up libgudev-1.0-0:s390x (237-2) ... Setting up libglx-mesa0:s390x (22.2.0~rc3-1) ... Setting up libglx0:s390x (1.5.0-1) ... Setting up libwacom9:s390x (2.4.0-3) ... Setting up libqt5network5:s390x (5.15.4+dfsg-5) ... Setting up libqt5sql5:s390x (5.15.4+dfsg-5) ... Setting up libqt5xml5:s390x (5.15.4+dfsg-5) ... Setting up libgl1:s390x (1.5.0-1) ... Setting up libnsl-dev:s390x (1.3.0-2) ... Setting up libc6-dev:s390x (2.34-7) ... Setting up libglx-dev:s390x (1.5.0-1) ... Setting up libgl-dev:s390x (1.5.0-1) ... Setting up libinput10:s390x (1.21.0-1) ... Setting up libegl-dev:s390x (1.5.0-1) ... Setting up libqt5gui5:s390x (5.15.4+dfsg-5) ... Setting up libqt5widgets5:s390x (5.15.4+dfsg-5) ... Setting up libqt5printsupport5:s390x (5.15.4+dfsg-5) ... Setting up libglu1-mesa-dev:s390x (9.0.2-1) ... Setting up libstdc++-11-dev:s390x (11.3.0-6) ... Setting up qtbase5-dev:s390x (5.15.4+dfsg-5) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-15-amd64 #1 SMP Debian 5.10.120-1 (2022-06-09) amd64 (x86_64) Toolchain package versions: binutils_2.38.90.20220713-2 dpkg-dev_1.21.9 g++-11_11.3.0-6 g++-12_12.2.0-2 gcc-11_11.3.0-6 gcc-12_12.2.0-2 libc6-dev_2.34-7 libstdc++-11-dev_11.3.0-6 libstdc++-12-dev_12.2.0-2 libstdc++-12-dev-s390x-cross_12.2.0-1cross1 libstdc++6_12.2.0-2 libstdc++6-s390x-cross_12.2.0-1cross1 linux-libc-dev_5.19.6-1 Package versions: adduser_3.129 apt_2.5.2 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.6.0 bash_5.2~rc2-2 binutils_2.38.90.20220713-2 binutils-common_2.38.90.20220713-2 binutils-s390x-linux-gnu_2.38.90.20220713-2 binutils-x86-64-linux-gnu_2.38.90.20220713-2 bsdextrautils_2.38.1-1 bsdutils_1:2.38.1-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:12.2.0-1 cpp-11_11.3.0-6 cpp-12_12.2.0-2 cpp-12-s390x-linux-gnu_12.2.0-1cross1 cpp-s390x-linux-gnu_4:12.2.0-1 cross-config_2.6.18+nmu2 crossbuild-essential-s390x_12.9 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.9.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dpkg_1.21.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.9 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 fontconfig_2.13.1-4.4 fontconfig-config_2.13.1-4.4 fonts-dejavu-core_2.37-2 g++_4:12.2.0-1 g++-11_11.3.0-6 g++-12_12.2.0-2 g++-12-s390x-linux-gnu_12.2.0-1cross1 g++-s390x-linux-gnu_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-6 gcc-11-base_11.3.0-6 gcc-12_12.2.0-2 gcc-12-base_12.2.0-2 gcc-12-cross-base_12.2.0-1cross1 gcc-12-s390x-linux-gnu_12.2.0-1cross1 gcc-12-s390x-linux-gnu-base_12.2.0-1cross1 gcc-9-base_9.5.0-2 gcc-s390x-linux-gnu_4:12.2.0-1 gettext_0.21-9 gettext-base_0.21-9 gpgv_2.2.39-1 grep_3.8-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.5 iso-codes_4.11.0-1 libacl1_2.3.1-1 libapt-pkg6.0_2.5.2 libarchive-zip-perl_1.68-1 libasan6_11.3.0-6 libasan8_12.2.0-2 libasan8-s390x-cross_12.2.0-1cross1 libatomic1_12.2.0-2 libatomic1-s390x-cross_12.2.0-1cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libavahi-client3_0.8-6 libavahi-common-data_0.8-6 libavahi-common3_0.8-6 libbinutils_2.38.90.20220713-2 libblkid1_2.38.1-1 libbrotli1_1.0.9-2+b4 libbsd0_0.11.6-1 libbz2-1.0_1.0.8-5 libc-bin_2.34-7 libc-dev-bin_2.34-7 libc6_2.34-7 libc6-dev_2.34-7 libc6-dev-s390x-cross_2.34-3cross1 libc6-s390x-cross_2.34-3cross1 libcap-ng0_0.8.3-1+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-2 libclang1-14_1:14.0.6-2 libcom-err2_1.46.5-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.38.90.20220713-2 libctf0_2.38.90.20220713-2 libcups2_2.4.2-1+b1 libdb5.3_5.3.28+dfsg1-0.10 libdbus-1-3_1.14.0-2 libdebconfclient0_0.264 libdebhelper-perl_13.9.1 libdebian-dpkgcross-perl_2.6.18+nmu2 libdouble-conversion3_3.2.1-1 libdpkg-perl_1.21.9 libdrm-amdgpu1_2.4.112-3 libdrm-common_2.4.112-3 libdrm-nouveau2_2.4.112-3 libdrm-radeon1_2.4.112-3 libdrm2_2.4.112-3 libdw1_0.187-2 libedit2_3.1-20210910-1 libegl-dev_1.5.0-1 libegl-mesa0_22.2.0~rc3-1 libegl1_1.5.0-1 libelf1_0.187-2 libevdev2_1.13.0+dfsg-1 libexpat1_2.4.8-1 libext2fs2_1.46.5-2 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.27-1 libfontconfig1_2.13.1-4.4 libfreetype6_2.12.1+dfsg-3 libgbm1_22.2.0~rc3-1 libgcc-11-dev_11.3.0-6 libgcc-12-dev_12.2.0-2 libgcc-12-dev-s390x-cross_12.2.0-1cross1 libgcc-s1_12.2.0-2 libgcc-s1-s390x-cross_12.2.0-1cross1 libgcrypt20_1.10.1-2 libgdbm-compat4_1.23-2 libgdbm6_1.23-2 libgl-dev_1.5.0-1 libgl1_1.5.0-1 libgl1-mesa-dri_22.2.0~rc3-1 libglapi-mesa_22.2.0~rc3-1 libglib2.0-0_2.73.3-3 libglu1-mesa_9.0.2-1 libglu1-mesa-dev_9.0.2-1 libglvnd0_1.5.0-1 libglx-dev_1.5.0-1 libglx-mesa0_22.2.0~rc3-1 libglx0_1.5.0-1 libgmp10_2:6.2.1+dfsg1-1 libgnutls30_3.7.7-2 libgomp1_12.2.0-2 libgomp1-s390x-cross_12.2.0-1cross1 libgpg-error0_1.45-2 libgprofng0_2.38.90.20220713-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20-1 libgstreamer-plugins-base1.0-0_1.20.3-2 libgstreamer1.0-0_1.20.3-1 libgudev-1.0-0_237-2 libharfbuzz0b_2.7.4-1+b1 libhogweed6_3.8.1-2 libhyphen0_2.8.8-7 libice6_2:1.0.10-1 libicu71_71.1-3 libidn2-0_2.3.3-1+b1 libinput-bin_1.21.0-1 libinput10_1.21.0-1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-2 libitm1-s390x-cross_12.2.0-1cross1 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MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: clustalx Binary: clustalx Architecture: any Version: 2.1+lgpl-9 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Charles Plessy , Andreas Tille Homepage: http://www.clustal.org/clustal2/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/clustalx Vcs-Git: https://salsa.debian.org/med-team/clustalx.git Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools Package-List: clustalx deb science optional arch=any Checksums-Sha1: 63196a4e113a22e5e575f223d76b7406f4f70795 341649 clustalx_2.1+lgpl.orig.tar.gz b7b02b1250b121b5162e6aa0e43a931c1518401e 15224 clustalx_2.1+lgpl-9.debian.tar.xz Checksums-Sha256: e10adb728c320598a165ca529f1aa3d2560061de0236e0a0926eaca9554afa05 341649 clustalx_2.1+lgpl.orig.tar.gz a72891b756770c26939b8dc96afd800dd2156057a47caa5f4085b53d362e8011 15224 clustalx_2.1+lgpl-9.debian.tar.xz Files: 5b1f2f1cc8e939411ab0f934cafa072a 341649 clustalx_2.1+lgpl.orig.tar.gz 6a04d1877358fa582cf4897c5296c45c 15224 clustalx_2.1+lgpl-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/KtjoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHcRg/8DE5lfxYDBGiO+4AQDpadrU1LFY+oeF8K 8FMaXTtrHFs3XOzd6Hph9Xv52WksJe5rDy9235r19UVhCrvCnq3VmcqTFgus/fCQ ZjPaxMDpllLS5vJIRqySjE8mJpW7i1nFnbv7WEfTF1pUfzdS1QHOnMTVLPfJE7P0 V2z6/5cF+apO/ifBubKGcjtpX35JtppnwOfWZ2tYG6RbXjag0ZyKsx+joZtmzu8E MnF/lLqNdIXccon5v8nndh961W3VLDAdn4hQy5emD135zF3ggqgRrGnknXnVVZZA o3JL8W7HHkDpgYBMDWNBrhlEvg0C6XweQS58gBxOs6+/hRTrxnBLXOc9+6780Bax jlp0o1h9qUD60fNYqjJnmuyVR3bBkfxZVYxIkNp1qslrxK4CaPN7yYIIg1g9bIt6 4jlgj2WGgvDF1PbZ1GwqqOqDiJbdhtKmUV2dD3R+5hde4Sl4msuK2ydtb7yVkvnm dD3GOhuipZSCJl4J/LW0IeVZ2535nUkJda2sW19tfWGB7+WajkeD4ZXnCw+xRoL3 cjU67dhnc97DXyDOcjFHdcduZH/jOTgDNxqL5zAV/oHHiewPg9Ey3gnX1/QSXfPc iNz2XPyn+vbU3vJW1t9zwKdyc+M5+upY9wXNgc7tWhMwFeaD0wT+3ekh4Xsa0Ukm WzSDicww5io= =5xFa -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.lk0u4M1V/trustedkeys.kbx': General error gpgv: Signature made Fri Dec 4 22:20:42 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./clustalx_2.1+lgpl-9.dsc dpkg-source: info: extracting clustalx in /<> dpkg-source: info: unpacking clustalx_2.1+lgpl.orig.tar.gz dpkg-source: info: unpacking clustalx_2.1+lgpl-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardcode-accessory-file-locations.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying qt5.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-ba258925-9410-48bf-ba21-501af92455aa SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package clustalx dpkg-buildpackage: info: source version 2.1+lgpl-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean dh_auto_clean debian/rules override_dh_clean make[1]: Entering directory '/<>' rm -f moc_* dh_clean make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure s390x-linux-gnu-qmake -makefile -spec linux-g\+\+ "QMAKE_CFLAGS_RELEASE=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CFLAGS_DEBUG=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CXXFLAGS_RELEASE=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CXXFLAGS_DEBUG=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_LFLAGS_RELEASE=-Wl,-z,relro -Wl,-z,now" "QMAKE_LFLAGS_DEBUG=-Wl,-z,relro -Wl,-z,now" QMAKE_STRIP=: PREFIX=/usr Info: creating stash file /<>/.qmake.stash # did not found a better way to push hardening flags into Makefile sed -i -e "s:CFLAGS *= .*:& -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security:" \ -e "s:CXXFLAGS *= .*:& -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security:" \ -e "s:LFLAGS *= .*:& -Wl,-z,relro -Wl,-z,now:" Makefile make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentFormatOptions.o AlignmentFormatOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentParameters.o AlignmentParameters.cpp In file included from clustalW/substitutionMatrix/globalmatrix.h:8, from AlignmentParameters.cpp:22: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ AlignmentParameters.cpp: In member function ‘virtual void AlignmentParameters::showEvent(QShowEvent*)’: AlignmentParameters.cpp:48:49: warning: unused parameter ‘event’ [-Wunused-parameter] 48 | void AlignmentParameters::showEvent(QShowEvent* event) | ~~~~~~~~~~~~^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentViewerWidget.o AlignmentViewerWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentViewerWidget.h:36, from AlignmentViewerWidget.cpp:66: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from AlignmentViewerWidget.cpp:68: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtCore/qdebug.h:54, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborcommon.h:45, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborvalue.h:45, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborarray.h:43, from /usr/include/s390x-linux-gnu/qt5/QtCore/QtCore:38, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgets:3, from AlignmentViewerWidget.cpp:63: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ AlignmentViewerWidget.cpp: In member function ‘int AlignmentViewerWidget::makeGapPenaltyData()’: AlignmentViewerWidget.cpp:588:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 588 | for(i = 0; i < len && i < gapMask->size(); i++) | ~~^~~~~~~~~~~~~~~~~ AlignmentViewerWidget.cpp: In member function ‘int AlignmentViewerWidget::makeSecStructData()’: AlignmentViewerWidget.cpp:645:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 645 | for (i = 0; i < len && i < _secStructMask->size();i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~ AlignmentViewerWidget.cpp:652:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 652 | for(i = 0; i < len && i < ssMask.size(); i++) | ~~^~~~~~~~~~~~~~~ AlignmentViewerWidget.cpp: In member function ‘virtual void AlignmentViewerWidget::resizeEvent(QResizeEvent*)’: AlignmentViewerWidget.cpp:781:58: warning: unused parameter ‘event’ [-Wunused-parameter] 781 | void AlignmentViewerWidget::resizeEvent ( QResizeEvent * event ) | ~~~~~~~~~~~~~~~^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentWidget.o AlignmentWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentWidget.h:41, from AlignmentWidget.cpp:49: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ AlignmentWidget.h: In constructor ‘AlignmentWidget::AlignmentWidget(int, int, QFont*, QWidget*)’: AlignmentWidget.h:170:10: warning: ‘AlignmentWidget::blackAndWhite’ will be initialized after [-Wreorder] 170 | bool blackAndWhite; | ^~~~~~~~~~~~~ AlignmentWidget.h:161:27: warning: ‘std::vector >* AlignmentWidget::selectedColoredRes’ [-Wreorder] 161 | std::vector* selectedColoredRes; | ^~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:65:1: warning: when initialized here [-Wreorder] 65 | AlignmentWidget::AlignmentWidget(int boxwidth, int boxsize, QFont* font, QWidget *parent) | ^~~~~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::calculatePixMaps()’: AlignmentWidget.cpp:225:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 225 | for(unsigned int j = 0; j < lengthLongestSeq; j++) | ~~^~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:235:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 235 | if(code >= 0 && code < conservationPixmaps->size()) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:268:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | if(codeForAA >=0 && codeForAA < lowScoreColoredRes->size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:280:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 280 | if(codeForAA >=0 && codeForAA < exceptionalColoredRes->size()) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:291:86: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 291 | if(colMask.getRowSize() > (i - extraRow) && colMask.getColSize() > j) | ~~~~~~~~~~~~~~~~~~~~~^~~ AlignmentWidget.cpp:215:9: warning: unused variable ‘codeForSpace’ [-Wunused-variable] 215 | int codeForSpace = clustalw::userParameters->resIndex( | ^~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::generateSecStructurePixmaps()’: AlignmentWidget.cpp:333:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 333 | if(i < secStructPixmaps->size() && i < secStructInfo.size()) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:344:34: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 344 | fontMetrics.width(secStructInfo[i])/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/s390x-linux-gnu/qt5/QtGui/QtGui:26, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgets:3, from AlignmentWidget.cpp:48: /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::drawContents(QPainter*, int, int, int, int)’: AlignmentWidget.cpp:569:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 569 | if(selectedRes >= selectedColoredRes->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::calcConserveInfo()’: AlignmentWidget.cpp:689:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 689 | for(int j = 1; j <= strongGroup.size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:693:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 693 | for(int j = 1; j <= weakGroup.size(); j++) | ~~^~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:700:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 700 | if((i + _fRes - 1 < (*alignment)[j].size()) && | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:701:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 701 | (i + _fRes - 1 < (*alignment)[_fSeq].size())) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:725:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 725 | for(int k = 1; k <= strongGroup.size(); k++) | ~~^~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:737:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 737 | for(int k = 1; k <= weakGroup.size(); k++) | ~~^~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:760:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 760 | for(int k = 1; k <= strongGroup.size(); k++) | ~~^~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:771:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 771 | for(int k = 1; k <= weakGroup.size(); k++) | ~~^~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::makeColorMask(clustalw::Array2D*, ColorParameters*)’: AlignmentWidget.cpp:878:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 878 | if(res + 1 < (*alignment)[currentSeq].size() && (lastSeq >= currentSeq)) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘QString AlignmentWidget::initConsensus()’: AlignmentWidget.cpp:927:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 927 | if(res + 1 < (*alignment)[currentSeq].size() && (lastSeq >= currentSeq)) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp: In member function ‘void AlignmentWidget::generatePixMaps()’: AlignmentWidget.cpp:1039:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1039 | for(int j = 0; j < aminoAcid.size(); j++) | ~~^~~~~~~~~~~~~~~~~~ AlignmentWidget.cpp:1051:49: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1051 | fontMetrics.width(currentChar)/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ AlignmentWidget.cpp:1079:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1079 | fontMetrics.width(currentChar)/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ AlignmentWidget.cpp:1089:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1089 | fontMetrics.width(currentChar)/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ AlignmentWidget.cpp:1099:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1099 | fontMetrics.width(currentChar)/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ AlignmentWidget.cpp:1118:30: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1118 | fontMetrics.width(currentChar)/2, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here 110 | int width(QChar) const; | ^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignOutputFileNames.o AlignOutputFileNames.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from AlignOutputFileNames.h:10, from AlignOutputFileNames.cpp:26: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ AlignOutputFileNames.h:106:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 106 | auto_ptr outFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qicon.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qpushbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QPushButton:1, from AlignOutputFileNames.cpp:16: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o BootstrapTreeDialog.o BootstrapTreeDialog.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from BootstrapTreeDialog.h:11, from BootstrapTreeDialog.cpp:18: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ BootstrapTreeDialog.h:70:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr treeFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qicon.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qpushbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QPushButton:1, from BootstrapTreeDialog.cpp:8: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ColorFileXmlParser.o ColorFileXmlParser.cpp ColorFileXmlParser.cpp:74:13: warning: multi-line comment [-Wcomment] 74 | // tr("colorrules not found in the parameter file, using\ | ^ In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from ColorParameters.h:11, from ColorFileXmlParser.h:9, from ColorFileXmlParser.cpp:3: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ ColorFileXmlParser.cpp: In member function ‘int ColorFileXmlParser::parseRGBIndex(const QDomElement&, QTreeWidgetItem*)’: ColorFileXmlParser.cpp:85:46: warning: unused parameter ‘parentItem’ [-Wunused-parameter] 85 | QTreeWidgetItem *parentItem) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~ ColorFileXmlParser.cpp: In member function ‘void ColorFileXmlParser::parseConsensus(const QDomElement&, QTreeWidgetItem*)’: ColorFileXmlParser.cpp:138:86: warning: unused parameter ‘parentItem’ [-Wunused-parameter] 138 | void ColorFileXmlParser::parseConsensus(const QDomElement &element, QTreeWidgetItem *parentItem) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~ ColorFileXmlParser.cpp: In member function ‘int ColorFileXmlParser::parseColorRule(const QDomElement&, QTreeWidgetItem*)’: ColorFileXmlParser.cpp:175:85: warning: unused parameter ‘parentItem’ [-Wunused-parameter] 175 | int ColorFileXmlParser::parseColorRule(const QDomElement &element, QTreeWidgetItem *parentItem) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ColorParameters.o ColorParameters.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from ColorParameters.h:11, from ColorParameters.cpp:1: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ ColorParameters.cpp: In member function ‘QColor ColorParameters::getResidueColor(QChar, QChar)’: ColorParameters.cpp:160:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 160 | for(i = 0; i < colorPar.size(); i++) | ~~^~~~~~~~~~~~~~~~~ ColorParameters.cpp:174:26: warning: unused variable ‘temp’ [-Wunused-variable] 174 | char temp = colorPar[i].consensusConditionList[j].toLatin1(); | ^~~~ ColorParameters.cpp:157:10: warning: unused variable ‘showRes’ [-Wunused-variable] 157 | char showRes = res.toLatin1(); | ^~~~~~~ ColorParameters.cpp:158:10: warning: unused variable ‘showCon’ [-Wunused-variable] 158 | char showCon = consensus.toLatin1(); | ^~~~~~~ ColorParameters.cpp: In member function ‘int ColorParameters::getResidueColorNum(QChar, QChar)’: ColorParameters.cpp:197:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 197 | for(i = 0; i < colorPar.size(); i++) | ~~^~~~~~~~~~~~~~~~~ ColorParameters.cpp:211:26: warning: unused variable ‘temp’ [-Wunused-variable] 211 | char temp = colorPar[i].consensusConditionList[j].toLatin1(); | ^~~~ ColorParameters.cpp:194:10: warning: unused variable ‘showRes’ [-Wunused-variable] 194 | char showRes = res.toLatin1(); | ^~~~~~~ ColorParameters.cpp:195:10: warning: unused variable ‘showCon’ [-Wunused-variable] 195 | char showCon = consensus.toLatin1(); | ^~~~~~~ ColorParameters.cpp: In member function ‘void ColorParameters::printColorInfo()’: ColorParameters.cpp:229:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | for(int i = 0; i < colors.size(); i++) | ~~^~~~~~~~~~~~~~~ ColorParameters.cpp: In member function ‘int ColorParameters::getIndexOfColor(QColor)’: ColorParameters.cpp:238:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 238 | for(int i = 0; i < colors.size(); i++) | ~~^~~~~~~~~~~~~~~ ColorParameters.cpp: In member function ‘QColor ColorParameters::getColorFromNum(int)’: ColorParameters.cpp:251:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | if(colorNum > 0 && colorNum - 1 < colorPar.size()) | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ColumnScoreParams.o ColumnScoreParams.cpp In file included from clustalW/substitutionMatrix/globalmatrix.h:8, from ColumnScoreParams.cpp:23: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ ColumnScoreParams.cpp: In member function ‘virtual void ColumnScoreParams::showEvent(QShowEvent*)’: ColumnScoreParams.cpp:51:47: warning: unused parameter ‘event’ [-Wunused-parameter] 51 | void ColumnScoreParams::showEvent(QShowEvent* event) | ~~~~~~~~~~~~^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o FileDialog.o FileDialog.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o HardCodedColorScheme.o HardCodedColorScheme.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from HardCodedColorScheme.cpp:1: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o HelpDisplayWidget.o HelpDisplayWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HelpDisplayWidget.h:18, from HelpDisplayWidget.cpp:15: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ HelpDisplayWidget.cpp: In member function ‘std::string* HelpDisplayWidget::loadHelpInformation(char)’: HelpDisplayWidget.cpp:147:29: warning: catching polymorphic type ‘class std::ios_base::failure’ by value [-Wcatch-value=] 147 | catch(ifstream::failure e) | ^ HelpDisplayWidget.cpp:61:13: warning: variable ‘number’ set but not used [-Wunused-but-set-variable] 61 | int i, number, nlines; | ^~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o HistogramWidget.o HistogramWidget.cpp HistogramWidget.cpp: In member function ‘void HistogramWidget::drawContents(QPainter*, int, int, int, int)’: HistogramWidget.cpp:180:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 180 | if(column >= 0 && column < arrayOfHeights->size()) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ HistogramWidget.cpp:198:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 198 | if(column >= 0 && column < arrayOfHeights->size()) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ HistogramWidget.cpp:208:47: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 208 | (fontMetrics.width(QString::number(rulerNum))) / 2; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qwidget.h:50, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qframe.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qlabel.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QLabel:1, from HistogramWidget.h:29, from HistogramWidget.cpp:23: /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ HistogramWidget.cpp:241:61: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 241 | (fontMetrics.width(QString::number(0))) / 2, yPos, boxWidth, | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o KeyController.o KeyController.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o LowScoringSegParams.o LowScoringSegParams.cpp In file included from clustalW/substitutionMatrix/globalmatrix.h:8, from LowScoringSegParams.cpp:22: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ LowScoringSegParams.cpp: In member function ‘virtual void LowScoringSegParams::showEvent(QShowEvent*)’: LowScoringSegParams.cpp:51:49: warning: unused parameter ‘event’ [-Wunused-parameter] 51 | void LowScoringSegParams::showEvent(QShowEvent* event) | ~~~~~~~~~~~~^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o main.o main.cpp In file included from main.cpp:21: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/Clustal.h:18, from mainwindow.h:45, from main.cpp:24: clustalW/fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpalette.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qwidget.h:48, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QWidget:1, from QTUtility.h:10, from main.cpp:22: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/Clustal.h:20: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o mainwindow.o mainwindow.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentViewerWidget.h:36, from mainwindow.h:37, from mainwindow.cpp:98: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/Clustal.h:18, from mainwindow.h:45: clustalW/fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtCore/qdebug.h:54, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborcommon.h:45, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborvalue.h:45, from /usr/include/s390x-linux-gnu/qt5/QtCore/qcborarray.h:43, from /usr/include/s390x-linux-gnu/qt5/QtCore/QtCore:38, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgets:3, from mainwindow.cpp:90: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/Clustal.h:20: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from mainwindow.cpp:99: WritePostscriptFile.h:88:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 88 | auto_ptr params; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from mainwindow.cpp:100: AlignOutputFileNames.h:106:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 106 | auto_ptr outFileNames; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from mainwindow.cpp:101: TreeOutputFileNames.h:73:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 73 | auto_ptr treeFileNames; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from mainwindow.cpp:102: BootstrapTreeDialog.h:70:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr treeFileNames; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ mainwindow.cpp: In member function ‘virtual void MainWindow::showEvent(QShowEvent*)’: mainwindow.cpp:198:40: warning: unused parameter ‘event’ [-Wunused-parameter] 198 | void MainWindow::showEvent(QShowEvent* event) | ~~~~~~~~~~~~^~~~~ mainwindow.cpp: In member function ‘void MainWindow::writeViewer1AsPostscript(int)’: mainwindow.cpp:1454:47: warning: unused parameter ‘type’ [-Wunused-parameter] 1454 | void MainWindow::writeViewer1AsPostscript(int type) | ~~~~^~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o PairwiseParams.o PairwiseParams.cpp In file included from clustalW/substitutionMatrix/globalmatrix.h:8, from PairwiseParams.cpp:23: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ PairwiseParams.cpp: In member function ‘virtual void PairwiseParams::showEvent(QShowEvent*)’: PairwiseParams.cpp:74:44: warning: unused parameter ‘event’ [-Wunused-parameter] 74 | void PairwiseParams::showEvent(QShowEvent* event) | ~~~~~~~~~~~~^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o PostscriptFileParams.o PostscriptFileParams.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from PostscriptFileParams.h:4, from PostscriptFileParams.cpp:1: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ProteinGapParameters.o ProteinGapParameters.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o PSPrinter.o PSPrinter.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from ColorParameters.h:11, from PSPrinter.h:11, from PSPrinter.cpp:20: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ PSPrinter.cpp: In member function ‘void PSPrinter::writePSFile(PostscriptFileParams*)’: PSPrinter.cpp:207:55: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 207 | if(res.isLetter() && resNumber.size() > i - data->firstSeq) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ PSPrinter.cpp:307:67: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 307 | if(res.isLetter() && resNumber.size() > seq) | ~~~~~~~~~~~~~~~~~^~~~~ PSPrinter.cpp:421:67: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 421 | if(res.isLetter() && resNumber.size() > i) | ~~~~~~~~~~~~~~~~~^~~ PSPrinter.cpp:55:9: warning: unused variable ‘err’ [-Wunused-variable] 55 | int err; | ^~~ PSPrinter.cpp:73:9: warning: unused variable ‘gapPos1’ [-Wunused-variable] 73 | int gapPos1 = clustalw::userParameters->getGapPos1(); // Mark: 22-1-2007 new local | ^~~~~~~ PSPrinter.cpp:74:9: warning: unused variable ‘gapPos2’ [-Wunused-variable] 74 | int gapPos2 = clustalw::userParameters->getGapPos2(); // Mark: 22-1-2007 new local | ^~~~~~~ PSPrinter.cpp: In member function ‘void PSPrinter::printHeaderLine(std::ofstream*, int, int, int)’: PSPrinter.cpp:587:32: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 587 | if(data->nameHeader.size() > ix) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ PSPrinter.cpp: In member function ‘void PSPrinter::printFooterLine(std::ofstream*, int, int)’: PSPrinter.cpp:730:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 730 | for(i = fr; i <= lr && i < ruler.length(); i++) | ~~^~~~~~~~~~~~~~~~ PSPrinter.cpp: In member function ‘void PSPrinter::printQualityCurve(std::ofstream*, int, int, int)’: PSPrinter.cpp:789:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 789 | for(i = fr + 1; i <= lr && i < data->histogram->size(); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ PSPrinter.cpp:781:14: warning: unused variable ‘psY’ [-Wunused-variable] 781 | int psX, psY, curveBottom; | ^~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o QTUtility.o QTUtility.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Resources.o Resources.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SaveSeqFile.o SaveSeqFile.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from SaveSeqFile.h:9, from SaveSeqFile.cpp:23: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from SaveSeqFile.cpp:26: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qicon.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qpushbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QPushButton:1, from SaveSeqFile.cpp:14: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SearchForString.o SearchForString.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SecStructOptions.o SecStructOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SeqNameWidget.o SeqNameWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from SeqNameWidget.h:41, from SeqNameWidget.cpp:59: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ SeqNameWidget.cpp: In member function ‘virtual void SeqNameWidget::paintEvent(QPaintEvent*)’: SeqNameWidget.cpp:375:11: warning: variable ‘redrawRect’ set but not used [-Wunused-but-set-variable] 375 | QRect redrawRect = event->rect(); | ^~~~~~~~~~ SeqNameWidget.cpp: In member function ‘int SeqNameWidget::setMaxNameLength()’: SeqNameWidget.cpp:443:43: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 443 | int length = fontMetrics.width(QString(name.c_str())); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/s390x-linux-gnu/qt5/QtGui/QtGui:26, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QtWidgets:3, from SeqNameWidget.cpp:58: /usr/include/s390x-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o TreeFormatOptions.o TreeFormatOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o TreeOutputFileNames.o TreeOutputFileNames.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from TreeOutputFileNames.h:10, from TreeOutputFileNames.cpp:17: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ TreeOutputFileNames.h:73:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 73 | auto_ptr treeFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qicon.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qpushbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QPushButton:1, from TreeOutputFileNames.cpp:7: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o WritePostscriptFile.o WritePostscriptFile.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from WritePostscriptFile.h:10, from WritePostscriptFile.cpp:24: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ WritePostscriptFile.h:88:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 88 | auto_ptr params; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:71, from /usr/include/s390x-linux-gnu/qt5/QtCore/qsharedpointer.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qpixmap.h:48, from /usr/include/s390x-linux-gnu/qt5/QtGui/qicon.h:46, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/qpushbutton.h:44, from /usr/include/s390x-linux-gnu/qt5/QtWidgets/QPushButton:1, from WritePostscriptFile.cpp:14: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from WritePostscriptFile.cpp:27: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Clustal.o clustalW/Clustal.cpp In file included from clustalW/fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/fileInput/../alignment/Alignment.h:42, from clustalW/fileInput/FileReader.h:12, from clustalW/Clustal.h:18, from clustalW/Clustal.cpp:27: clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/fileInput/FileReader.h:11: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/Clustal.h:20: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/Clustal.cpp:33: clustalW/tree/TreeInterface.h:38:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 38 | auto_ptr getWeightsAndStepsFromDistMat(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:57:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 57 | auto_ptr getWeightsAndStepsFromTree(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:102:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 102 | auto_ptr getWeightsAndStepsFromDistMatNJ(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:108:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | auto_ptr getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:133:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 133 | auto_ptr getWeightsAndStepsFromTreeNJ(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:138:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 138 | auto_ptr getWeightsAndStepsFromDistMatUPGMA(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:142:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 142 | auto_ptr generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/Clustal.cpp: In member function ‘void clustalw::Clustal::align(std::string*, bool)’: clustalW/Clustal.cpp:162:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 162 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/Clustal.cpp: In member function ‘void clustalw::Clustal::doAlignUseOldTree(std::string*)’: clustalW/Clustal.cpp:837:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 837 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Help.o clustalW/Help.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Alignment.o clustalW/alignment/Alignment.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from clustalW/alignment/Alignment.cpp:25: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetProfile1()’: clustalW/alignment/Alignment.cpp:47:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 47 | register int sl; /* which have code = gap_pos2 */ | ^~ clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetProfile2()’: clustalW/alignment/Alignment.cpp:122:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 122 | register int sl; /* which have code = gap_pos2 */ | ^~ clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetAlign()’: clustalW/alignment/Alignment.cpp:617:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 617 | register int sl; | ^~ clustalW/alignment/Alignment.cpp: In member function ‘bool clustalw::Alignment::keepPortionOfSeqArray(int, int)’: clustalW/alignment/Alignment.cpp:1715:24: warning: variable ‘posToAddTo’ set but not used [-Wunused-but-set-variable] 1715 | SeqArray::iterator posToAddTo = sectionToRealign.begin(); | ^~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentOutput.o clustalW/alignment/AlignmentOutput.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from clustalW/alignment/AlignmentOutput.h:24, from clustalW/alignment/AlignmentOutput.cpp:27: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/alignment/AlignmentOutput.h:20: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.cpp:512:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 512 | bool AlignmentOutput::openExplicitFile(auto_ptr& outFile, string fileName) | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.cpp:535:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 535 | string AlignmentOutput::openOutputFile(auto_ptr& outFile, string prompt, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::fastaOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:673:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 673 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::gcgOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:868:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 868 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::phylipOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:1027:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 1027 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::nexusOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:1156:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 1156 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::gdeOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:1445:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 1445 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::nbrfOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:1560:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 1560 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::clustalOut(clustalw::Alignment*, clustalw::outputRegion)’: clustalW/alignment/AlignmentOutput.cpp:2095:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 2095 | catch(VectorOutOfRange e) | ^ clustalW/alignment/AlignmentOutput.cpp:2102:21: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=] 2102 | catch(exception e) | ^ clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::findRangeValues(clustalw::Alignment*, clustalw::rangeNum*, int, int, int)’: clustalW/alignment/AlignmentOutput.cpp:2351:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=] 2351 | catch(VectorOutOfRange e) | ^ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ObjectiveScore.o clustalW/alignment/ObjectiveScore.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/ObjectiveScore.h:15, from clustalW/alignment/ObjectiveScore.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Sequence.o clustalW/alignment/Sequence.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ClustalFileParser.o clustalW/fileInput/ClustalFileParser.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o EMBLFileParser.o clustalW/fileInput/EMBLFileParser.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o FileParser.o clustalW/fileInput/FileParser.cpp clustalW/fileInput/FileParser.cpp: In member function ‘void clustalw::FileParser::fillCharTab()’: clustalW/fileInput/FileParser.cpp:37:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 37 | register int i; | ^ clustalW/fileInput/FileParser.cpp:38:19: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 38 | register char c; | ^ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o FileReader.o clustalW/fileInput/FileReader.cpp In file included from clustalW/fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/fileInput/../alignment/Alignment.h:42, from clustalW/fileInput/FileReader.h:12, from clustalW/fileInput/FileReader.cpp:29: clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/fileInput/FileReader.h:11: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/fileInput/FileReader.cpp: In member function ‘int clustalw::FileReader::readSeqs(clustalw::Alignment*, int, std::string*)’: clustalW/fileInput/FileReader.cpp:155:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 155 | auto_ptr fileParser; // Means we dont need to delete it! | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/fileInput/FileReader.cpp: At global scope: clustalW/fileInput/FileReader.cpp:426:42: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 426 | void FileReader::checkInfile(int *nseqs, auto_ptr& fileParser) | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/fileInput/FileReader.cpp: In member function ‘void clustalw::FileReader::checkInfile(int*, std::auto_ptr&)’: clustalW/fileInput/FileReader.cpp:555:21: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=] 555 | catch(exception ex) | ^~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o GDEFileParser.o clustalW/fileInput/GDEFileParser.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o InFileStream.o clustalW/fileInput/InFileStream.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o MSFFileParser.o clustalW/fileInput/MSFFileParser.cpp clustalW/fileInput/MSFFileParser.cpp: In member function ‘virtual std::vector clustalw::MSFFileParser::getSeqRange(int, int, std::string*)’: clustalW/fileInput/MSFFileParser.cpp:34:79: warning: unused parameter ‘offendingSeq’ [-Wunused-parameter] 34 | vector MSFFileParser::getSeqRange(int firstSeq, int no, string *offendingSeq) | ~~~~~~~~^~~~~~~~~~~~ clustalW/fileInput/MSFFileParser.cpp: In member function ‘virtual void clustalw::MSFFileParser::getSecStructure(std::vector&, std::vector&, std::string&, int&, int)’: clustalW/fileInput/MSFFileParser.cpp:246:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter] 246 | void MSFFileParser::getSecStructure(vector& gapPenaltyMask, vector& secStructMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ clustalW/fileInput/MSFFileParser.cpp:246:81: warning: unused parameter ‘secStructMask’ [-Wunused-parameter] 246 | void MSFFileParser::getSecStructure(vector& gapPenaltyMask, vector& secStructMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/MSFFileParser.cpp:247:45: warning: unused parameter ‘secStructName’ [-Wunused-parameter] 247 | string& secStructName, int &structPenalties, int length) | ~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/MSFFileParser.cpp:247:86: warning: unused parameter ‘length’ [-Wunused-parameter] 247 | string& secStructName, int &structPenalties, int length) | ~~~~^~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o PearsonFileParser.o clustalW/fileInput/PearsonFileParser.cpp clustalW/fileInput/PearsonFileParser.cpp: In member function ‘virtual clustalw::Sequence clustalw::PearsonFileParser::getSeq(int, std::string*)’: clustalW/fileInput/PearsonFileParser.cpp:199:60: warning: unused parameter ‘offendingSeq’ [-Wunused-parameter] 199 | Sequence PearsonFileParser::getSeq(int seqNum, string *offendingSeq) | ~~~~~~~~^~~~~~~~~~~~ clustalW/fileInput/PearsonFileParser.cpp: In member function ‘virtual void clustalw::PearsonFileParser::getSecStructure(std::vector&, std::vector&, std::string&, int&, int)’: clustalW/fileInput/PearsonFileParser.cpp:444:55: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter] 444 | void PearsonFileParser::getSecStructure(vector& gapPenaltyMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ clustalW/fileInput/PearsonFileParser.cpp:445:40: warning: unused parameter ‘secStructMask’ [-Wunused-parameter] 445 | vector& secStructMask, string& secStructName, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/PearsonFileParser.cpp:445:63: warning: unused parameter ‘secStructName’ [-Wunused-parameter] 445 | vector& secStructMask, string& secStructName, | ~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/PearsonFileParser.cpp:446:53: warning: unused parameter ‘length’ [-Wunused-parameter] 446 | int &structPenalties, int length) | ~~~~^~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o PIRFileParser.o clustalW/fileInput/PIRFileParser.cpp clustalW/fileInput/PIRFileParser.cpp: In member function ‘virtual void clustalw::PIRFileParser::getSecStructure(std::vector&, std::vector&, std::string&, int&, int)’: clustalW/fileInput/PIRFileParser.cpp:292:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter] 292 | void PIRFileParser::getSecStructure(vector& gapPenaltyMask, vector& secStructMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ clustalW/fileInput/PIRFileParser.cpp:292:81: warning: unused parameter ‘secStructMask’ [-Wunused-parameter] 292 | void PIRFileParser::getSecStructure(vector& gapPenaltyMask, vector& secStructMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/PIRFileParser.cpp:293:45: warning: unused parameter ‘secStructName’ [-Wunused-parameter] 293 | string& secStructName, int &structPenalties, int length) | ~~~~~~~~^~~~~~~~~~~~~ clustalW/fileInput/PIRFileParser.cpp:293:86: warning: unused parameter ‘length’ [-Wunused-parameter] 293 | string& secStructName, int &structPenalties, int length) | ~~~~^~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o RSFFileParser.o clustalW/fileInput/RSFFileParser.cpp clustalW/fileInput/RSFFileParser.cpp: In member function ‘virtual void clustalw::RSFFileParser::getSecStructure(std::vector&, std::vector&, std::string&, int&, int)’: clustalW/fileInput/RSFFileParser.cpp:240:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter] 240 | void RSFFileParser::getSecStructure(vector& gapPenaltyMask, vector& secStructMask, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ClustalWResources.o clustalW/general/ClustalWResources.cpp clustalW/general/ClustalWResources.cpp: In member function ‘std::string clustalw::ClustalWResources::findFile(std::string, clustalw::ClustalWResourcePathType) const’: clustalW/general/ClustalWResources.cpp:106:12: warning: array subscript 1 is above array bounds of ‘char [1]’ [-Warray-bounds] 106 | delim[1] = 0; | ~~~~~~~^ clustalW/general/ClustalWResources.cpp:104:10: note: while referencing ‘delim’ 104 | char delim[1]; | ^~~~~ clustalW/general/ClustalWResources.cpp:105:14: warning: writing 2 bytes into a region of size 1 [-Wstringop-overflow=] 105 | delim[0] = DIRDELIM; | ~~~~~~~~~^~~~~~~~~~ clustalW/general/ClustalWResources.cpp:104:10: note: destination object ‘delim’ of size 1 104 | char delim[1]; | ^~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o DebugLog.o clustalW/general/DebugLog.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o OutputFile.o clustalW/general/OutputFile.cpp In file included from clustalW/general/OutputFile.cpp:9: clustalW/general/OutputFile.h:26:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | std::auto_ptr file; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/general/OutputFile.h:8: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Stats.o clustalW/general/Stats.cpp In file included from clustalW/general/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/general/../alignment/Alignment.h:42, from clustalW/general/Stats.cpp:15: clustalW/general/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/general/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SymMatrix.o clustalW/general/SymMatrix.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o UserParameters.o clustalW/general/UserParameters.cpp clustalW/general/UserParameters.cpp: In constructor ‘clustalw::UserParameters::UserParameters(bool)’: clustalW/general/UserParameters.cpp:33:37: warning: unused parameter ‘log’ [-Wunused-parameter] 33 | UserParameters::UserParameters(bool log) | ~~~~~^~~ clustalW/general/UserParameters.cpp: In member function ‘int clustalw::UserParameters::resIndex(std::string, char)’: clustalW/general/UserParameters.cpp:475:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 475 | register int i; | ^ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Utility.o clustalW/general/Utility.cpp clustalW/general/Utility.cpp: In member function ‘char* clustalw::Utility::rTrim(char*)’: clustalW/general/Utility.cpp:53:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 53 | register int p; | ^ clustalW/general/Utility.cpp: In member function ‘bool clustalw::Utility::lineType(char*, const char*)’: clustalW/general/Utility.cpp:251:8: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 251 | int n; | ^ clustalW/general/Utility.cpp: In member function ‘virtual void clustalw::Utility::setInfoLabelPtr(QLabel*)’: clustalW/general/Utility.cpp:519:39: warning: unused parameter ‘ptrToLabelObj’ [-Wunused-parameter] 519 | void Utility::setInfoLabelPtr(QLabel* ptrToLabelObj) | ~~~~~~~~^~~~~~~~~~~~~ clustalW/general/Utility.cpp: In member function ‘double clustalw::Utility::getReal(const char*, double, double, double)’: clustalW/general/Utility.cpp:183:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 183 | fgets(line, MAXLINE, stdin); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ clustalW/general/Utility.cpp: In member function ‘int clustalw::Utility::getInt(const char*, int, int, int)’: clustalW/general/Utility.cpp:221:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 221 | fgets(line, MAXLINE, stdin); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o VectorOutOfRange.o clustalW/general/VectorOutOfRange.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o CommandLineParser.o clustalW/interface/CommandLineParser.cpp In file included from clustalW/interface/../fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/interface/../fileInput/../alignment/Alignment.h:42, from clustalW/interface/../fileInput/FileReader.h:12, from clustalW/interface/../Clustal.h:18, from clustalW/interface/CommandLineParser.h:18, from clustalW/interface/CommandLineParser.cpp:13: clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/interface/../fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/interface/../fileInput/FileReader.h:11: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/interface/../Clustal.h:20: clustalW/interface/../alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o InteractiveMenu.o clustalW/interface/InteractiveMenu.cpp In file included from clustalW/interface/../fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/interface/../fileInput/../alignment/Alignment.h:42, from clustalW/interface/../fileInput/FileReader.h:12, from clustalW/interface/../Clustal.h:18, from clustalW/interface/InteractiveMenu.h:15, from clustalW/interface/InteractiveMenu.cpp:23: clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/interface/../fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/interface/../fileInput/FileReader.h:11: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/interface/../Clustal.h:20: clustalW/interface/../alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/../alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/interface/InteractiveMenu.cpp: In constructor ‘clustalw::InteractiveMenu::InteractiveMenu()’: clustalW/interface/InteractiveMenu.cpp:41:11: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] 41 | catch(bad_alloc) | ^~~~~~~~~ clustalW/interface/InteractiveMenu.cpp: In member function ‘int clustalw::InteractiveMenu::secStrOutputOptions()’: clustalW/interface/InteractiveMenu.cpp:520:36: warning: this statement may fall through [-Wimplicit-fallthrough=] 520 | clustalObj->getHelp('C'); | ~~~~~~~~~~~~~~~~~~~^~~~~ clustalW/interface/InteractiveMenu.cpp:521:13: note: here 521 | case 'Q': | ^~~~ clustalW/interface/InteractiveMenu.cpp: In member function ‘void clustalw::InteractiveMenu::doSystem()’: clustalW/interface/InteractiveMenu.cpp:1190:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1190 | system(lin1.c_str()); | ~~~~~~^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Iteration.o clustalW/multipleAlign/Iteration.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/Iteration.h:8, from clustalW/multipleAlign/Iteration.cpp:13: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/multipleAlign/Iteration.cpp:17: clustalW/multipleAlign/../tree/TreeInterface.h:38:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 38 | auto_ptr getWeightsAndStepsFromDistMat(vector* seqWeights, | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/multipleAlign/../tree/TreeInterface.h:17: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:57:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 57 | auto_ptr getWeightsAndStepsFromTree(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:102:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 102 | auto_ptr getWeightsAndStepsFromDistMatNJ(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:108:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | auto_ptr getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:133:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 133 | auto_ptr getWeightsAndStepsFromTreeNJ(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:138:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 138 | auto_ptr getWeightsAndStepsFromDistMatUPGMA(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/../tree/TreeInterface.h:142:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 142 | auto_ptr generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/multipleAlign/Iteration.cpp: In member function ‘bool clustalw::Iteration::removeFirstIterate(clustalw::Alignment*)’: clustalW/multipleAlign/Iteration.cpp:170:9: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 170 | int count; | ^~~~~ clustalW/multipleAlign/Iteration.cpp:231:24: warning: ignoring return value of ‘char* tmpnam(char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 231 | tmpnam (buffer); | ~~~~~~~^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o LowScoreSegProfile.o clustalW/multipleAlign/LowScoreSegProfile.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/LowScoreSegProfile.h:13, from clustalW/multipleAlign/LowScoreSegProfile.cpp:9: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o MSA.o clustalW/multipleAlign/MSA.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/ProfileBase.h:14, from clustalW/multipleAlign/MSA.h:10, from clustalW/multipleAlign/MSA.cpp:16: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/MSA.cpp: In member function ‘int clustalw::MSA::multiSeqAlign(clustalw::Alignment*, clustalw::DistMatrix*, std::vector*, clustalw::AlignmentSteps*, int)’: clustalW/multipleAlign/MSA.cpp:340:11: warning: unused variable ‘alignmentScore’ [-Wunused-variable] 340 | int alignmentScore = alnPtr->alignScore(); // ?? check, FS, 2009-05-18 | ^~~~~~~~~~~~~~ clustalW/multipleAlign/MSA.cpp: In member function ‘int clustalw::MSA::seqsAlignToProfile(clustalw::Alignment*, clustalw::DistMatrix*, std::vector*, int, std::string)’: clustalW/multipleAlign/MSA.cpp:359:35: warning: unused parameter ‘phylipName’ [-Wunused-parameter] 359 | string phylipName) | ~~~~~~~^~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o MyersMillerProfileAlign.o clustalW/multipleAlign/MyersMillerProfileAlign.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/ProfileAlignAlgorithm.h:10, from clustalW/multipleAlign/MyersMillerProfileAlign.h:10, from clustalW/multipleAlign/MyersMillerProfileAlign.cpp:10: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileBase.o clustalW/multipleAlign/ProfileBase.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/ProfileBase.h:14, from clustalW/multipleAlign/ProfileBase.cpp:9: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/ProfileBase.cpp: In member function ‘void clustalw::ProfileBase::calcResidueSpecificPen(clustalw::SeqArray*, std::vector*)’: clustalW/multipleAlign/ProfileBase.cpp:372:25: warning: comparison is always false due to limited range of data type [-Wtype-limits] 372 | if ((ix < 0) || (ix > _maxAA)) | ~~~^~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileStandard.o clustalW/multipleAlign/ProfileStandard.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/ProfileStandard.h:9, from clustalW/multipleAlign/ProfileStandard.cpp:9: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileWithSub.o clustalW/multipleAlign/ProfileWithSub.cpp In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/multipleAlign/../alignment/Alignment.h:42, from clustalW/multipleAlign/ProfileWithSub.h:9, from clustalW/multipleAlign/ProfileWithSub.cpp:9: clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o FastPairwiseAlign.o clustalW/pairwise/FastPairwiseAlign.cpp In file included from clustalW/pairwise/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/pairwise/../alignment/Alignment.h:42, from clustalW/pairwise/PairwiseAlignBase.h:10, from clustalW/pairwise/FastPairwiseAlign.h:9, from clustalW/pairwise/FastPairwiseAlign.cpp:10: clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o FullPairwiseAlign.o clustalW/pairwise/FullPairwiseAlign.cpp In file included from clustalW/pairwise/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/pairwise/../alignment/Alignment.h:42, from clustalW/pairwise/PairwiseAlignBase.h:10, from clustalW/pairwise/FullPairwiseAlign.h:9, from clustalW/pairwise/FullPairwiseAlign.cpp:9: clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o SubMatrix.o clustalW/substitutionMatrix/SubMatrix.cpp In file included from clustalW/substitutionMatrix/SubMatrix.cpp:15: clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::tempInterface(int, int)’: clustalW/substitutionMatrix/SubMatrix.cpp:1613:35: warning: unused parameter ‘alignResidueType’ [-Wunused-parameter] 1613 | void SubMatrix::tempInterface(int alignResidueType, int alignType) | ~~~~^~~~~~~~~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.cpp:1613:57: warning: unused parameter ‘alignType’ [-Wunused-parameter] 1613 | void SubMatrix::tempInterface(int alignResidueType, int alignType) | ~~~~^~~~~~~~~ clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::getQTMatrixForHistogram(int (*)[32])’: clustalW/substitutionMatrix/SubMatrix.cpp:1657:9: warning: variable ‘maxRes’ set but not used [-Wunused-but-set-variable] 1657 | int maxRes; | ^~~~~~ clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::getQTMatrixForLowScoreSeg(int (*)[32])’: clustalW/substitutionMatrix/SubMatrix.cpp:1717:9: warning: variable ‘maxRes’ set but not used [-Wunused-but-set-variable] 1717 | int maxRes; | ^~~~~~ clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘int clustalw::SubMatrix::readMatrixSeries(const char*, clustalw::Matrix&, clustalw::Xref&)’: clustalW/substitutionMatrix/SubMatrix.cpp:1103:19: warning: ‘n’ may be used uninitialized [-Wmaybe-uninitialized] 1103 | return (maxRes); | ^ clustalW/substitutionMatrix/SubMatrix.cpp:998:9: note: ‘n’ was declared here 998 | int n, llimit, ulimit; | ^ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentSteps.o clustalW/tree/AlignmentSteps.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ClusterTree.o clustalW/tree/ClusterTree.cpp In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/../alignment/Alignment.h:42, from clustalW/tree/ClusterTree.h:20, from clustalW/tree/ClusterTree.cpp:9: clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/tree/ClusterTree.h:23: clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | std::auto_ptr file; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/ClusterTree.h:16: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/ClusterTree.h:70:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr quickDistMat; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/ClusterTree.cpp: In member function ‘void clustalw::ClusterTree::calcPercIdentity(std::ofstream*, clustalw::Alignment*)’: clustalW/tree/ClusterTree.cpp:580:9: warning: variable ‘rs’ set but not used [-Wunused-but-set-variable] 580 | int rs = 0, rl = 0; | ^~ clustalW/tree/ClusterTree.cpp:580:17: warning: variable ‘rl’ set but not used [-Wunused-but-set-variable] 580 | int rs = 0, rl = 0; | ^~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o ClusterTreeOutput.o clustalW/tree/ClusterTreeOutput.cpp In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/../alignment/Alignment.h:42, from clustalW/tree/ClusterTreeOutput.h:11, from clustalW/tree/ClusterTreeOutput.cpp:9: clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o NJTree.o clustalW/tree/NJTree.cpp clustalW/tree/NJTree.cpp: In member function ‘virtual void clustalw::NJTree::generateTree(clustalw::PhyloTree*, clustalw::DistMatrix*, clustalw::SeqInfo*, std::ofstream*)’: clustalW/tree/NJTree.cpp:164:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 164 | register int i; | ^ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o RandomGenerator.o clustalW/tree/RandomGenerator.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Tree.o clustalW/tree/Tree.cpp In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/../alignment/Alignment.h:42, from clustalW/tree/Tree.h:13, from clustalW/tree/Tree.cpp:10: clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/Tree.h:26:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | auto_ptr createSets(int firstSeq, int lastSeq); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/Tree.h:15: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/Tree.cpp:278:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 278 | auto_ptr Tree::createSets(int firstSeq, int lastSeq) | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/Tree.cpp: In member function ‘std::auto_ptr clustalw::Tree::createSets(int, int)’: clustalW/tree/Tree.cpp:280:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 280 | auto_ptr progAlignSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o TreeInterface.o clustalW/tree/TreeInterface.cpp In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/../alignment/Alignment.h:42, from clustalW/tree/TreeInterface.h:19, from clustalW/tree/TreeInterface.cpp:15: clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/TreeInterface.h:38:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 38 | auto_ptr getWeightsAndStepsFromDistMat(vector* seqWeights, | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/TreeInterface.h:17: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:57:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 57 | auto_ptr getWeightsAndStepsFromTree(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:102:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 102 | auto_ptr getWeightsAndStepsFromDistMatNJ(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:108:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 108 | auto_ptr getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:133:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 133 | auto_ptr getWeightsAndStepsFromTreeNJ(Alignment* alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:138:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 138 | auto_ptr getWeightsAndStepsFromDistMatUPGMA(vector* seqWeights, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.h:142:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 142 | auto_ptr generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/tree/ClusterTree.h:23, from clustalW/tree/UnRootedClusterTree.h:8, from clustalW/tree/TreeInterface.cpp:17: clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | std::auto_ptr file; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/ClusterTree.h:70:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr quickDistMat; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/tree/TreeInterface.cpp:18: clustalW/tree/Tree.h:26:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | auto_ptr createSets(int firstSeq, int lastSeq); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/tree/TreeInterface.cpp:23: clustalW/tree/UPGMA/RootedClusterTree.h:22:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22 | auto_ptr treeFromDistMatrix(RootedGuideTree* phyloTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp:31:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 31 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp:103:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 103 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp:195:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 195 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr clustalw::TreeInterface::getWeightsAndStepsFromDistMatNJ(std::vector*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’: clustalW/tree/TreeInterface.cpp:200:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 200 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: At global scope: clustalW/tree/TreeInterface.cpp:208:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 208 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr clustalw::TreeInterface::getWeightsAndStepsUseOldGuideTreeNJ(clustalw::DistMatrix*, clustalw::Alignment*, std::string*, std::vector*, int, int, bool*)’: clustalW/tree/TreeInterface.cpp:214:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 214 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: At global scope: clustalW/tree/TreeInterface.cpp:439:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 439 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr clustalw::TreeInterface::getWeightsAndStepsFromTreeNJ(clustalw::Alignment*, clustalw::DistMatrix*, std::string*, std::vector*, int, int, bool*)’: clustalW/tree/TreeInterface.cpp:445:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 445 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: At global scope: clustalW/tree/TreeInterface.cpp:485:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 485 | auto_ptr | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr clustalw::TreeInterface::getWeightsAndStepsFromDistMatUPGMA(std::vector*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’: clustalW/tree/TreeInterface.cpp:490:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 490 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: At global scope: clustalW/tree/TreeInterface.cpp:503:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 503 | auto_ptr TreeInterface::generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree, DistMatrix* distMat, Alignment *alignPtr, int seq1, int nSeqs, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr clustalw::TreeInterface::generateTreeFromDistMatUPGMA(clustalw::RootedGuideTree*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’: clustalW/tree/TreeInterface.cpp:506:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 506 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o UnRootedClusterTree.o clustalW/tree/UnRootedClusterTree.cpp In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/../alignment/Alignment.h:42, from clustalW/tree/ClusterTree.h:20, from clustalW/tree/UnRootedClusterTree.h:8, from clustalW/tree/UnRootedClusterTree.cpp:9: clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/tree/ClusterTree.h:23: clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | std::auto_ptr file; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/ClusterTree.h:16: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/ClusterTree.h:70:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr quickDistMat; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o Node.o clustalW/tree/UPGMA/Node.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o RootedClusterTree.o clustalW/tree/UPGMA/RootedClusterTree.cpp In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/UPGMA/../../alignment/Alignment.h:42, from clustalW/tree/UPGMA/../ClusterTree.h:20, from clustalW/tree/UPGMA/RootedClusterTree.h:8, from clustalW/tree/UPGMA/RootedClusterTree.cpp:9: clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/tree/UPGMA/../ClusterTree.h:23: clustalW/tree/UPGMA/../../general/OutputFile.h:26:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 26 | std::auto_ptr file; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/UPGMA/../ClusterTree.h:16: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/../ClusterTree.h:70:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr quickDistMat; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/RootedClusterTree.h:22:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 22 | auto_ptr treeFromDistMatrix(RootedGuideTree* phyloTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/tree/UPGMA/RootedClusterTree.cpp:11: clustalW/tree/UPGMA/UPGMAAlgorithm.h:23:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23 | auto_ptr generateTree(RootedGuideTree* phyTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/UPGMAAlgorithm.h:51:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 51 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/RootedClusterTree.cpp:17:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 17 | auto_ptr RootedClusterTree::treeFromDistMatrix(RootedGuideTree* phyloTree,DistMatrix* distMat, Alignment *alignPtr, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/RootedClusterTree.cpp: In member function ‘std::auto_ptr clustalw::RootedClusterTree::treeFromDistMatrix(clustalw::RootedGuideTree*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string&)’: clustalW/tree/UPGMA/RootedClusterTree.cpp:21:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 21 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o RootedGuideTree.o clustalW/tree/UPGMA/RootedGuideTree.cpp In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/UPGMA/../../alignment/Alignment.h:42, from clustalW/tree/UPGMA/RootedGuideTree.h:17, from clustalW/tree/UPGMA/RootedGuideTree.cpp:10: clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o RootedTreeOutput.o clustalW/tree/UPGMA/RootedTreeOutput.cpp In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/UPGMA/../../alignment/Alignment.h:42, from clustalW/tree/UPGMA/RootedGuideTree.h:17, from clustalW/tree/UPGMA/RootedTreeOutput.h:15, from clustalW/tree/UPGMA/RootedTreeOutput.cpp:9: clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o UPGMAAlgorithm.o clustalW/tree/UPGMA/UPGMAAlgorithm.cpp In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/tree/UPGMA/../../alignment/Alignment.h:42, from clustalW/tree/UPGMA/RootedGuideTree.h:17, from clustalW/tree/UPGMA/UPGMAAlgorithm.h:8, from clustalW/tree/UPGMA/UPGMAAlgorithm.cpp:4: clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/tree/UPGMA/UPGMAAlgorithm.h:23:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 23 | auto_ptr generateTree(RootedGuideTree* phyTree, | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from clustalW/tree/UPGMA/UPGMAAlgorithm.h:10: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/UPGMAAlgorithm.h:51:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 51 | auto_ptr progSteps; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/tree/UPGMA/UPGMAAlgorithm.cpp:27:1: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 27 | auto_ptr UPGMAAlgorithm::generateTree(RootedGuideTree* phyTree, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -dM -E -o moc_predefs.h /usr/lib/s390x-linux-gnu/qt5/mkspecs/features/data/dummy.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include AlignmentFormatOptions.h -o moc_AlignmentFormatOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentFormatOptions.o moc_AlignmentFormatOptions.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include AlignmentParameters.h -o moc_AlignmentParameters.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentParameters.o moc_AlignmentParameters.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include AlignmentViewerWidget.h -o moc_AlignmentViewerWidget.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentViewerWidget.o moc_AlignmentViewerWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentViewerWidget.h:36, from moc_AlignmentViewerWidget.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include AlignmentWidget.h -o moc_AlignmentWidget.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentWidget.o moc_AlignmentWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentWidget.h:41, from moc_AlignmentWidget.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include AlignOutputFileNames.h -o moc_AlignOutputFileNames.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignOutputFileNames.o moc_AlignOutputFileNames.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from AlignOutputFileNames.h:10, from moc_AlignOutputFileNames.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ AlignOutputFileNames.h:106:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 106 | auto_ptr outFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from moc_AlignOutputFileNames.cpp:9: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include BootstrapTreeDialog.h -o moc_BootstrapTreeDialog.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_BootstrapTreeDialog.o moc_BootstrapTreeDialog.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from BootstrapTreeDialog.h:11, from moc_BootstrapTreeDialog.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ BootstrapTreeDialog.h:70:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 70 | auto_ptr treeFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from moc_BootstrapTreeDialog.cpp:9: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include ColorFileXmlParser.h -o moc_ColorFileXmlParser.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ColorFileXmlParser.o moc_ColorFileXmlParser.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from ColorParameters.h:11, from ColorFileXmlParser.h:9, from moc_ColorFileXmlParser.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include ColumnScoreParams.h -o moc_ColumnScoreParams.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ColumnScoreParams.o moc_ColumnScoreParams.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include FileDialog.h -o moc_FileDialog.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_FileDialog.o moc_FileDialog.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include HelpDisplayWidget.h -o moc_HelpDisplayWidget.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_HelpDisplayWidget.o moc_HelpDisplayWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HelpDisplayWidget.h:18, from moc_HelpDisplayWidget.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include HistogramWidget.h -o moc_HistogramWidget.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_HistogramWidget.o moc_HistogramWidget.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include LowScoringSegParams.h -o moc_LowScoringSegParams.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_LowScoringSegParams.o moc_LowScoringSegParams.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include mainwindow.h -o moc_mainwindow.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_mainwindow.o moc_mainwindow.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from AlignmentViewerWidget.h:36, from mainwindow.h:37, from moc_mainwindow.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ In file included from clustalW/Clustal.h:18, from mainwindow.h:45: clustalW/fileInput/FileReader.h:42:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 42 | void checkInfile(int* nseqs, auto_ptr& fileParser); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from moc_mainwindow.cpp:9: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ In file included from clustalW/Clustal.h:20: clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 68 | bool openExplicitFile(auto_ptr& outFile, string fileName); | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 69 | string openOutputFile(auto_ptr& outFile, string prompt, string path, | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | auto_ptr clustalOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 76 | auto_ptr gcgOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 77 | auto_ptr nbrfOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 78 | auto_ptr phylipOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 79 | auto_ptr gdeOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 80 | auto_ptr nexusOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 81 | auto_ptr fastaOutFile; | ^~~~~~~~ /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include PairwiseParams.h -o moc_PairwiseParams.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_PairwiseParams.o moc_PairwiseParams.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include ProteinGapParameters.h -o moc_ProteinGapParameters.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ProteinGapParameters.o moc_ProteinGapParameters.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include PSPrinter.h -o moc_PSPrinter.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_PSPrinter.o moc_PSPrinter.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from HardCodedColorScheme.h:8, from ColorParameters.h:11, from PSPrinter.h:11, from moc_PSPrinter.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include SaveSeqFile.h -o moc_SaveSeqFile.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SaveSeqFile.o moc_SaveSeqFile.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from SaveSeqFile.h:9, from moc_SaveSeqFile.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include SearchForString.h -o moc_SearchForString.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SearchForString.o moc_SearchForString.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include SecStructOptions.h -o moc_SecStructOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SecStructOptions.o moc_SecStructOptions.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include SeqNameWidget.h -o moc_SeqNameWidget.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SeqNameWidget.o moc_SeqNameWidget.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from SeqNameWidget.h:41, from moc_SeqNameWidget.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include TreeFormatOptions.h -o moc_TreeFormatOptions.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_TreeFormatOptions.o moc_TreeFormatOptions.cpp /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include TreeOutputFileNames.h -o moc_TreeOutputFileNames.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_TreeOutputFileNames.o moc_TreeOutputFileNames.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from TreeOutputFileNames.h:10, from moc_TreeOutputFileNames.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ TreeOutputFileNames.h:73:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 73 | auto_ptr treeFileNames; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from moc_TreeOutputFileNames.cpp:9: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ /usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<>/moc_predefs.h -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -I/<> -I/<> -I/<>/clustalW/general -I/<>/clustalW/substitutionMatrix -I/<>/clustalW/alignment -I/<>/clustalW -I/<>/clustalW/fileInput -I/<>/clustalW/interface -I/<>/clustalW/pairwise -I/<>/clustalW/multipleAlign -I/<>/clustalW/tree -I/<>/clustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I/usr/s390x-linux-gnu/include/c++/12 -I/usr/s390x-linux-gnu/include/c++/12/s390x-linux-gnu -I/usr/s390x-linux-gnu/include/c++/12/backward -I/usr/lib/gcc-cross/s390x-linux-gnu/12/include -I/usr/s390x-linux-gnu/include -I/usr/include/s390x-linux-gnu -I/usr/include WritePostscriptFile.h -o moc_WritePostscriptFile.cpp s390x-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/s390x-linux-gnu/qt5 -I/usr/include/s390x-linux-gnu/qt5/QtWidgets -I/usr/include/s390x-linux-gnu/qt5/QtGui -I/usr/include/s390x-linux-gnu/qt5/QtXml -I/usr/include/s390x-linux-gnu/qt5/QtCore -I. -I/usr/lib/s390x-linux-gnu/qt5/mkspecs/linux-g++ -o moc_WritePostscriptFile.o moc_WritePostscriptFile.cpp In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8, from clustalW/alignment/Alignment.h:42, from ClustalQtParams.h:13, from WritePostscriptFile.h:10, from moc_WritePostscriptFile.cpp:10: clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 96 | void printInFormat(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 97 | void printVectorToFile(vector& temp, char* name = "tempfile.out"); | ^~~~~~~~~~~~~~ WritePostscriptFile.h:88:5: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 88 | auto_ptr params; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/12/memory:76, from moc_WritePostscriptFile.cpp:9: /usr/s390x-linux-gnu/include/c++/12/bits/unique_ptr.h:64:28: note: declared here 64 | template class auto_ptr; | ^~~~~~~~ s390x-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wl,-z,relro -Wl,-z,now -o clustalx AlignmentFormatOptions.o AlignmentParameters.o AlignmentViewerWidget.o AlignmentWidget.o AlignOutputFileNames.o BootstrapTreeDialog.o ColorFileXmlParser.o ColorParameters.o ColumnScoreParams.o FileDialog.o HardCodedColorScheme.o HelpDisplayWidget.o HistogramWidget.o KeyController.o LowScoringSegParams.o main.o mainwindow.o PairwiseParams.o PostscriptFileParams.o ProteinGapParameters.o PSPrinter.o QTUtility.o Resources.o SaveSeqFile.o SearchForString.o SecStructOptions.o SeqNameWidget.o TreeFormatOptions.o TreeOutputFileNames.o WritePostscriptFile.o Clustal.o Help.o Alignment.o AlignmentOutput.o ObjectiveScore.o Sequence.o ClustalFileParser.o EMBLFileParser.o FileParser.o FileReader.o GDEFileParser.o InFileStream.o MSFFileParser.o PearsonFileParser.o PIRFileParser.o RSFFileParser.o ClustalWResources.o DebugLog.o OutputFile.o Stats.o SymMatrix.o UserParameters.o Utility.o VectorOutOfRange.o CommandLineParser.o InteractiveMenu.o Iteration.o LowScoreSegProfile.o MSA.o MyersMillerProfileAlign.o ProfileBase.o ProfileStandard.o ProfileWithSub.o FastPairwiseAlign.o FullPairwiseAlign.o SubMatrix.o AlignmentSteps.o ClusterTree.o ClusterTreeOutput.o NJTree.o RandomGenerator.o Tree.o TreeInterface.o UnRootedClusterTree.o Node.o RootedClusterTree.o RootedGuideTree.o RootedTreeOutput.o UPGMAAlgorithm.o moc_AlignmentFormatOptions.o moc_AlignmentParameters.o moc_AlignmentViewerWidget.o moc_AlignmentWidget.o moc_AlignOutputFileNames.o moc_BootstrapTreeDialog.o moc_ColorFileXmlParser.o moc_ColumnScoreParams.o moc_FileDialog.o moc_HelpDisplayWidget.o moc_HistogramWidget.o moc_LowScoringSegParams.o moc_mainwindow.o moc_PairwiseParams.o moc_ProteinGapParameters.o moc_PSPrinter.o moc_SaveSeqFile.o moc_SearchForString.o moc_SecStructOptions.o moc_SeqNameWidget.o moc_TreeFormatOptions.o moc_TreeOutputFileNames.o moc_WritePostscriptFile.o /usr/lib/s390x-linux-gnu/libQt5Widgets.so /usr/lib/s390x-linux-gnu/libQt5Gui.so /usr/lib/s390x-linux-gnu/libQt5Xml.so /usr/lib/s390x-linux-gnu/libQt5Core.so -lGL -lpthread /usr/lib/gcc-cross/s390x-linux-gnu/12/../../../../s390x-linux-gnu/bin/ld: Iteration.o: in function `clustalw::Iteration::removeFirstIterate(clustalw::Alignment*)': ./clustalW/multipleAlign/Iteration.cpp:231: warning: the use of `tmpnam' is dangerous, better use `mkstemp' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/clustalx/ -a dh_install -a dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs debian/CHANGELOG.upstream make[1]: Leaving directory '/<>' dh_installman -a dh_installmime -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'clustalx' in '../clustalx_2.1+lgpl-9_s390x.deb'. dpkg-deb: building package 'clustalx-dbgsym' in '../clustalx-dbgsym_2.1+lgpl-9_s390x.deb'. dpkg-genbuildinfo --build=any -O../clustalx_2.1+lgpl-9_s390x.buildinfo dpkg-genchanges --build=any -O../clustalx_2.1+lgpl-9_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-09-10T10:40:10Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ clustalx_2.1+lgpl-9_s390x.changes: ---------------------------------- Format: 1.8 Date: Fri, 04 Dec 2020 22:57:37 +0100 Source: clustalx Binary: clustalx clustalx-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 2.1+lgpl-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: clustalx - Multiple alignment of nucleic acid and protein sequences (graphic Changes: clustalx (2.1+lgpl-9) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set field Upstream-Contact in debian/copyright. * Remove obsolete field Contact from debian/upstream/metadata (already present in machine-readable debian/copyright). * watch file standard 4 (routine-update) * No quotet entry in mailcap Checksums-Sha1: d0e88b491439aa22f5fc38fcc501e474acebd86e 9400432 clustalx-dbgsym_2.1+lgpl-9_s390x.deb f513d1bb4b704a8ba49fa17692cf1a07d066ce41 10039 clustalx_2.1+lgpl-9_s390x.buildinfo 10512412f6d2131404d0b0ab029013ab89af8ada 395852 clustalx_2.1+lgpl-9_s390x.deb Checksums-Sha256: caa108228d1d6857aab795fbcc099602aa9a15c16ea9fc2219a1f0ca55f038b0 9400432 clustalx-dbgsym_2.1+lgpl-9_s390x.deb 69e3e03a318e223ced09155b8869f185a352904e3fb0b684b69db7ee39c71b65 10039 clustalx_2.1+lgpl-9_s390x.buildinfo 36b43660c42f6fefdcfab0c880771b931ae3d40c091af1cd0d6e07a65c9339f3 395852 clustalx_2.1+lgpl-9_s390x.deb Files: de47d548a817085da0f3d6ec9cb162f6 9400432 debug optional clustalx-dbgsym_2.1+lgpl-9_s390x.deb 1f7ac969b059fa8bb0039d7090a9b73e 10039 science optional clustalx_2.1+lgpl-9_s390x.buildinfo 8648e668e7bce6bd0e5cb1280bf6b056 395852 science optional clustalx_2.1+lgpl-9_s390x.deb /<>/clustalx_2.1+lgpl-9_s390x.changes.new could not be renamed to /<>/clustalx_2.1+lgpl-9_s390x.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: clustalx Binary: clustalx clustalx-dbgsym Architecture: s390x Version: 2.1+lgpl-9 Checksums-Md5: de47d548a817085da0f3d6ec9cb162f6 9400432 clustalx-dbgsym_2.1+lgpl-9_s390x.deb 8648e668e7bce6bd0e5cb1280bf6b056 395852 clustalx_2.1+lgpl-9_s390x.deb Checksums-Sha1: d0e88b491439aa22f5fc38fcc501e474acebd86e 9400432 clustalx-dbgsym_2.1+lgpl-9_s390x.deb 10512412f6d2131404d0b0ab029013ab89af8ada 395852 clustalx_2.1+lgpl-9_s390x.deb Checksums-Sha256: caa108228d1d6857aab795fbcc099602aa9a15c16ea9fc2219a1f0ca55f038b0 9400432 clustalx-dbgsym_2.1+lgpl-9_s390x.deb 36b43660c42f6fefdcfab0c880771b931ae3d40c091af1cd0d6e07a65c9339f3 395852 clustalx_2.1+lgpl-9_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 10 Sep 2022 10:40:10 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-9), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.6.0), bash (= 5.2~rc2-2), binutils (= 2.38.90.20220713-2), binutils-common (= 2.38.90.20220713-2), binutils-x86-64-linux-gnu (= 2.38.90.20220713-2), bsdextrautils (= 2.38.1-1), bsdutils (= 1:2.38.1-1), build-essential (= 12.9), bzip2 (= 1.0.8-5), coreutils (= 8.32-4.1), cpp (= 4:12.2.0-1), cpp-11 (= 11.3.0-6), cpp-12 (= 12.2.0-2), dash (= 0.5.11+git20210903+057cd650a4ed-9), debconf (= 1.5.79), debhelper (= 13.9.1), debianutils (= 5.7-0.3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dpkg (= 1.21.9), dpkg-dev (= 1.21.9), dwz (= 0.14-1), file (= 1:5.41-4), findutils (= 4.9.0-3), fontconfig (= 2.13.1-4.4), fontconfig-config (= 2.13.1-4.4), fonts-dejavu-core (= 2.37-2), g++ (= 4:12.2.0-1), g++-12 (= 12.2.0-2), gcc (= 4:12.2.0-1), gcc-11 (= 11.3.0-6), gcc-11-base (= 11.3.0-6), gcc-12 (= 12.2.0-2), gcc-12-base (= 12.2.0-2), gettext (= 0.21-9), gettext-base (= 0.21-9), grep (= 3.8-1), groff-base (= 1.22.4-8), gzip (= 1.12-1), hostname (= 3.23), init-system-helpers (= 1.64), intltool-debian (= 0.35.0+20060710.5), iso-codes (= 4.11.0-1), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-6), libasan8 (= 12.2.0-2), libatomic1 (= 12.2.0-2), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libavahi-client3 (= 0.8-6), libavahi-common-data (= 0.8-6), libavahi-common3 (= 0.8-6), libbinutils (= 2.38.90.20220713-2), libblkid1 (= 2.38.1-1), libbrotli1 (= 1.0.9-2+b4), libbsd0 (= 0.11.6-1), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.34-7), libc-dev-bin (= 2.34-7), libc6 (= 2.34-7), libc6-dev (= 2.34-7), libcap-ng0 (= 0.8.3-1+b1), libcap2 (= 1:2.44-1), libcap2-bin (= 1:2.44-1), libcc1-0 (= 12.2.0-2), libclang1-14 (= 1:14.0.6-2), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.28-2), libcrypt1 (= 1:4.4.28-2), libctf-nobfd0 (= 2.38.90.20220713-2), libctf0 (= 2.38.90.20220713-2), libcups2 (= 2.4.2-1+b1), libdb5.3 (= 5.3.28+dfsg1-0.10), libdbus-1-3 (= 1.14.0-2), libdebconfclient0 (= 0.264), libdebhelper-perl (= 13.9.1), libdouble-conversion3 (= 3.2.1-1), libdpkg-perl (= 1.21.9), libdrm-amdgpu1 (= 2.4.112-3), libdrm-common (= 2.4.112-3), libdrm-nouveau2 (= 2.4.112-3), libdrm-radeon1 (= 2.4.112-3), libdrm2 (= 2.4.112-3), libdw1 (= 0.187-2), libedit2 (= 3.1-20210910-1), libegl-dev (= 1.5.0-1), libegl-mesa0 (= 22.2.0~rc3-1), libegl1 (= 1.5.0-1), libelf1 (= 0.187-2), libevdev2 (= 1.13.0+dfsg-1), libexpat1 (= 2.4.8-1), libffi8 (= 3.4.2-4), libfile-stripnondeterminism-perl (= 1.13.0-1), libfontconfig1 (= 2.13.1-4.4), libfreetype6 (= 2.12.1+dfsg-3), libgbm1 (= 22.2.0~rc3-1), libgcc-11-dev (= 11.3.0-6), libgcc-12-dev (= 12.2.0-2), libgcc-s1 (= 12.2.0-2), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-2), libgdbm6 (= 1.23-2), libgl-dev (= 1.5.0-1), libgl1 (= 1.5.0-1), libgl1-mesa-dri (= 22.2.0~rc3-1), libglapi-mesa (= 22.2.0~rc3-1), libglib2.0-0 (= 2.73.3-3), libglu1-mesa (= 9.0.2-1), libglu1-mesa-dev (= 9.0.2-1), libglvnd0 (= 1.5.0-1), libglx-dev (= 1.5.0-1), libglx-mesa0 (= 22.2.0~rc3-1), libglx0 (= 1.5.0-1), libgmp10 (= 2:6.2.1+dfsg1-1), libgnutls30 (= 3.7.7-2), libgomp1 (= 12.2.0-2), libgpg-error0 (= 1.45-2), libgprofng0 (= 2.38.90.20220713-2), libgraphite2-3 (= 1.3.14-1), libgssapi-krb5-2 (= 1.20-1), libgstreamer-plugins-base1.0-0 (= 1.20.3-2), libgstreamer1.0-0 (= 1.20.3-1), libgudev-1.0-0 (= 237-2), libharfbuzz0b (= 2.7.4-1+b1), libhogweed6 (= 3.8.1-2), libhyphen0 (= 2.8.8-7), libice6 (= 2:1.0.10-1), libicu71 (= 71.1-3), libidn2-0 (= 2.3.3-1+b1), libinput-bin (= 1.21.0-1), libinput10 (= 1.21.0-1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-2), libjpeg62-turbo (= 1:2.1.2-1), libk5crypto3 (= 1.20-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1), libkrb5support0 (= 1.20-1), libllvm14 (= 1:14.0.6-2), liblsan0 (= 12.2.0-2), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmd0 (= 1.0.4-2), libmd4c0 (= 0.4.8-1), libmount1 (= 2.38.1-1), libmpc3 (= 1.2.1-2), libmpdec3 (= 2.5.1-2), libmpfr6 (= 4.1.0-3), libmtdev1 (= 1.1.6-1), libncursesw6 (= 6.3+20220423-2), libnettle8 (= 3.8.1-2), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libopengl0 (= 1.5.0-1), liborc-0.4-0 (= 1:0.4.32-2), libp11-kit0 (= 0.24.1-1), libpam-modules (= 1.5.2-2), libpam-modules-bin (= 1.5.2-2), libpam-runtime (= 1.5.2-2), libpam0g (= 1.5.2-2), libpcre2-16-0 (= 10.40-1), libpcre2-8-0 (= 10.40-1), libperl5.34 (= 5.34.0-5), libpipeline1 (= 1.5.6-2), libpng16-16 (= 1.6.37-5), libpthread-stubs0-dev (= 0.4-1), libpython3-stdlib (= 3.10.6-1), libpython3.10-minimal (= 3.10.7-1), libpython3.10-stdlib (= 3.10.7-1), libqt5concurrent5 (= 5.15.4+dfsg-5), libqt5core5a (= 5.15.4+dfsg-5), libqt5dbus5 (= 5.15.4+dfsg-5), libqt5designer5 (= 5.15.4-2+b1), libqt5designercomponents5 (= 5.15.4-2+b1), libqt5gui5 (= 5.15.4+dfsg-5), libqt5help5 (= 5.15.4-2+b1), libqt5network5 (= 5.15.4+dfsg-5), libqt5positioning5 (= 5.15.4+dfsg-2), libqt5printsupport5 (= 5.15.4+dfsg-5), libqt5qml5 (= 5.15.4+dfsg-4), libqt5qmlmodels5 (= 5.15.4+dfsg-4), libqt5quick5 (= 5.15.4+dfsg-4), libqt5quickwidgets5 (= 5.15.4+dfsg-4), libqt5sensors5 (= 5.15.4-2), libqt5sql5 (= 5.15.4+dfsg-5), libqt5sql5-sqlite (= 5.15.4+dfsg-5), libqt5test5 (= 5.15.4+dfsg-5), libqt5webchannel5 (= 5.15.4-2), libqt5webkit5 (= 5.212.0~alpha4-21), libqt5widgets5 (= 5.15.4+dfsg-5), libqt5xml5 (= 5.15.4+dfsg-5), libquadmath0 (= 12.2.0-2), libreadline8 (= 8.2~rc2-2), libseccomp2 (= 2.5.4-1+b1), libselinux1 (= 3.4-1+b1), libsensors-config (= 1:3.6.0-7), libsensors5 (= 1:3.6.0-7), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.38.1-1), libsqlite3-0 (= 3.39.3-1), libssl3 (= 3.0.5-2), libstdc++-12-dev (= 12.2.0-2), libstdc++6 (= 12.2.0-2), libsub-override-perl (= 0.09-3), libsystemd0 (= 251.4-3), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-6), libtsan2 (= 12.2.0-2), libubsan1 (= 12.2.0-2), libuchardet0 (= 0.0.7-1), libudev1 (= 251.4-3), libunistring2 (= 1.0-1), libunwind8 (= 1.3.2-2), libuuid1 (= 2.38.1-1), libvulkan-dev (= 1.3.224.0-1), libvulkan1 (= 1.3.224.0-1), libwacom-common (= 2.4.0-3), libwacom9 (= 2.4.0-3), libwayland-client0 (= 1.21.0-1), libwayland-server0 (= 1.21.0-1), libwebp7 (= 1.2.2-2+b1), libwoff1 (= 1.0.2-2), libx11-6 (= 2:1.8.1-2), libx11-data (= 2:1.8.1-2), libx11-dev (= 2:1.8.1-2), libx11-xcb1 (= 2:1.8.1-2), libxau-dev (= 1:1.0.9-1), libxau6 (= 1:1.0.9-1), libxcb-dri2-0 (= 1.15-1), libxcb-dri3-0 (= 1.15-1), libxcb-glx0 (= 1.15-1), libxcb-icccm4 (= 0.4.1-1.1), libxcb-image0 (= 0.4.0-2), libxcb-keysyms1 (= 0.4.0-1+b2), libxcb-present0 (= 1.15-1), libxcb-randr0 (= 1.15-1), libxcb-render-util0 (= 0.3.9-1+b1), libxcb-render0 (= 1.15-1), libxcb-shape0 (= 1.15-1), libxcb-shm0 (= 1.15-1), libxcb-sync1 (= 1.15-1), libxcb-util1 (= 0.4.0-1+b1), libxcb-xfixes0 (= 1.15-1), libxcb-xinerama0 (= 1.15-1), libxcb-xinput0 (= 1.15-1), libxcb-xkb1 (= 1.15-1), libxcb1 (= 1.15-1), libxcb1-dev (= 1.15-1), libxdmcp-dev (= 1:1.1.2-3), libxdmcp6 (= 1:1.1.2-3), libxext-dev (= 2:1.3.4-1), libxext6 (= 2:1.3.4-1), libxfixes3 (= 1:6.0.0-1), libxkbcommon-x11-0 (= 1.4.1-1), libxkbcommon0 (= 1.4.1-1), libxml2 (= 2.9.14+dfsg-1+b1), libxrender1 (= 1:0.9.10-1.1), libxshmfence1 (= 1.3-1), libxslt1.1 (= 1.1.35-1), libxxf86vm1 (= 1:1.1.4-1+b2), libz3-4 (= 4.8.12-1+b1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.6-1), login (= 1:4.11.1+dfsg1-2), m4 (= 1.4.19-1), make (= 4.3-4.1), man-db (= 2.10.2-3), mawk (= 1.3.4.20200120-3.1), media-types (= 8.0.0), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.34.0-5), perl-base (= 5.34.0-5), perl-modules-5.34 (= 5.34.0-5), po-debconf (= 1.0.21+nmu1), python3 (= 3.10.6-1), python3-minimal (= 3.10.6-1), python3.10 (= 3.10.7-1), python3.10-minimal (= 3.10.7-1), qdoc-qt5 (= 5.15.4-2+b1), qhelpgenerator-qt5 (= 5.15.4-2+b1), qt5-assistant (= 5.15.4-2+b1), qt5-qmake (= 5.15.4+dfsg-5), qt5-qmake-bin (= 5.15.4+dfsg-5), qtattributionsscanner-qt5 (= 5.15.4-2+b1), qtbase5-dev (= 5.15.4+dfsg-5), qtbase5-dev-tools (= 5.15.4+dfsg-5), qtchooser (= 66-2), qttools5-dev-tools (= 5.15.4-2+b1), readline-common (= 8.2~rc2-2), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), shared-mime-info (= 2.2-1), sysvinit-utils (= 3.05-2), tar (= 1.34+dfsg-1), ucf (= 3.0043), util-linux (= 2.38.1-1), util-linux-extra (= 2.38.1-1), x11-common (= 1:7.7+23), x11proto-dev (= 2022.1-1), xkb-data (= 2.35.1-1), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.4.0-1), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1607119057" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ clustalx-dbgsym_2.1+lgpl-9_s390x.deb ------------------------------------ new Debian package, version 2.0. size 9400432 bytes: control archive=540 bytes. 381 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: clustalx-dbgsym Source: clustalx Version: 2.1+lgpl-9 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 9371 Depends: clustalx (= 2.1+lgpl-9) Section: debug Priority: optional Description: debug symbols for clustalx Build-Ids: 7d7101828fa31182fcd6337f9851e8de90aa7e17 drwxr-xr-x root/root 0 2020-12-04 21:57 ./ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/debug/.build-id/7d/ -rw-r--r-- root/root 9584744 2020-12-04 21:57 ./usr/lib/debug/.build-id/7d/7101828fa31182fcd6337f9851e8de90aa7e17.debug drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-12-04 21:57 ./usr/share/doc/clustalx-dbgsym -> clustalx clustalx_2.1+lgpl-9_s390x.deb ----------------------------- new Debian package, version 2.0. size 395852 bytes: control archive=1456 bytes. 1547 bytes, 27 lines control 874 bytes, 13 lines md5sums Package: clustalx Version: 2.1+lgpl-9 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 1401 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libqt5core5a (>= 5.7.0), libqt5gui5 (>= 5.2.0) | libqt5gui5-gles (>= 5.2.0), libqt5widgets5 (>= 5.0.2), libqt5xml5 (>= 5.0.2), libstdc++6 (>= 11) Suggests: clustalw, texlive-latex-extra, boxshade Section: science Priority: optional Homepage: http://www.clustal.org/clustal2/ Description: Multiple alignment of nucleic acid and protein sequences (graphical interface) This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade. . The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment. . An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted. drwxr-xr-x root/root 0 2020-12-04 21:57 ./ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/bin/ -rwxr-xr-x root/root 1323768 2020-12-04 21:57 ./usr/bin/clustalx drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/mime/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/lib/mime/packages/ -rw-r--r-- root/root 112 2020-12-04 21:57 ./usr/lib/mime/packages/clustalx drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/applications/ -rw-r--r-- root/root 876 2020-12-04 21:57 ./usr/share/applications/clustalx.desktop drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/clustalx/ -rw-r--r-- root/root 69428 2010-11-17 10:12 ./usr/share/clustalx/clustalx.hlp -rw-r--r-- root/root 847 2010-11-17 10:12 ./usr/share/clustalx/coldna.xml -rw-r--r-- root/root 1276 2010-11-17 10:12 ./usr/share/clustalx/colprint.xml -rw-r--r-- root/root 5047 2010-11-17 10:12 ./usr/share/clustalx/colprot.xml drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/doc/clustalx/ -rw-r--r-- root/root 410 2020-12-04 21:57 ./usr/share/doc/clustalx/README.Debian -rw-r--r-- root/root 4670 2020-12-04 21:57 ./usr/share/doc/clustalx/changelog.Debian.gz -rw-r--r-- root/root 3440 2020-12-04 21:57 ./usr/share/doc/clustalx/changelog.gz -rw-r--r-- root/root 1860 2020-12-04 21:57 ./usr/share/doc/clustalx/copyright drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/man/man1/ -rw-r--r-- root/root 797 2020-12-04 21:57 ./usr/share/man/man1/clustalx.1.gz drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/mime/ drwxr-xr-x root/root 0 2020-12-04 21:57 ./usr/share/mime/packages/ -rw-r--r-- root/root 513 2020-12-04 21:57 ./usr/share/mime/packages/clustalx.xml lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [550 B] Get:5 copy:/<>/apt_archive ./ Packages [637 B] Fetched 2150 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip t1utils unzip Suggested packages: libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:s390x t1utils unzip 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 10.4 MB of archives. After this operation, 29.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.3 [19.9 kB] Get:3 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.5-2 [1421 kB] Get:4 http://localhost:3142/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:5 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:6 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-4 [51.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.39-1 [585 kB] Get:8 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.39-1 [969 kB] Get:9 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-2 [14.2 kB] Get:10 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:11 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2 [11.2 kB] Get:12 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-2 [13.1 kB] Get:13 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2 [25.6 kB] Get:15 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:16 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:17 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:18 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-2 [8044 B] Get:19 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.62-2 [45.7 kB] Get:20 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-1+b2 [124 kB] Get:22 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:23 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-5 [13.1 kB] Get:24 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:25 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.12-1 [93.7 kB] Get:26 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.78-1 [105 kB] Get:27 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.54-1 [224 kB] Get:28 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:29 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.13-2 [19.4 kB] Get:30 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4 [37.5 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:32 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:33 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:34 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.928-2 [11.0 kB] Get:35 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:36 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:37 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:38 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.32-1 [130 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:41 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:42 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexporter-tiny-perl all 1.004000-1 [38.7 kB] Get:44 http://localhost:3142/debian sid/main amd64 liblist-moreutils-xs-perl amd64 0.430-3 [40.3 kB] Get:45 http://localhost:3142/debian sid/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-2 [33.7 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2 [104 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2 [25.8 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1 [29.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-2 [13.5 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:60 http://localhost:3142/debian sid/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:61 http://localhost:3142/debian sid/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:62 http://localhost:3142/debian sid/main amd64 libfile-find-rule-perl all 0.34-2 [28.4 kB] Get:63 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:64 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:65 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:66 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:67 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:68 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.37-1 [80.9 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.10-1 [24.0 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-2 [21.6 kB] Get:72 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:73 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:74 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:75 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:76 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2 [343 kB] Get:77 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.075-1 [220 kB] Get:78 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:79 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:80 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:81 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.67-1 [194 kB] Get:82 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:83 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:84 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:85 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:86 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:90 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-4 [42.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-3 [18.8 kB] Get:94 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:95 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:97 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:98 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:99 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:100 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:101 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-2 [11.9 kB] Get:102 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2 [13.7 kB] Get:103 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:104 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1 [17.5 kB] Get:106 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:107 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:108 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 4.025+ds-1 [103 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 4.025+ds-1 [104 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-2 [10.7 kB] Get:112 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.25-1 [53.3 kB] Get:113 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:114 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2 [27.2 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5 [8656 B] Get:116 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:117 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:118 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:119 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2 [73.0 kB] Get:120 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:121 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.15-1 [120 kB] Get:122 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:123 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.84+ds-1 [36.1 kB] Get:124 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-4 [64.0 kB] Get:125 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:126 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:127 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:128 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-27 [172 kB] Get:129 http://localhost:3142/debian sid/main amd64 lintian all 2.115.3 [1417 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 10.4 MB in 0s (90.2 MB/s) Selecting previously unselected package netbase. (Reading database ... 27624 files and directories currently installed.) Preparing to unpack .../000-netbase_6.3_all.deb ... Unpacking netbase (6.3) ... Selecting previously unselected package openssl. Preparing to unpack .../001-openssl_3.0.5-2_amd64.deb ... Unpacking openssl (3.0.5-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../002-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package diffstat. Preparing to unpack .../003-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../004-libassuan0_2.5.5-4_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../005-gpgconf_2.2.39-1_amd64.deb ... Unpacking gpgconf (2.2.39-1) ... Selecting previously unselected package gpg. Preparing to unpack .../006-gpg_2.2.39-1_amd64.deb ... 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Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../012-libparams-classify-perl_0.015-2_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../013-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../014-libtry-tiny-perl_0.31-1_all.deb ... Unpacking libtry-tiny-perl (0.31-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../015-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../016-libsub-exporter-progressive-perl_0.001013-2_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-2) ... 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Unpacking libclass-method-modifiers-perl (2.13-2) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../028-libclass-xsaccessor-perl_1.19-4_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-4) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../029-libclone-perl_0.45-1+b2_amd64.deb ... Unpacking libclone-perl (0.45-1+b2) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../030-libconfig-tiny-perl_2.28-1_all.deb ... Unpacking libconfig-tiny-perl (2.28-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../031-libparams-util-perl_1.102-1+b2_amd64.deb ... Unpacking libparams-util-perl (1.102-1+b2) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../032-libsub-install-perl_0.928-2_all.deb ... Unpacking libsub-install-perl (0.928-2) ... Selecting previously unselected package libdata-optlist-perl. 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Unpacking libemail-address-xs-perl (1.05-1) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../055-libencode-locale-perl_1.05-2_all.deb ... Unpacking libencode-locale-perl (1.05-2) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../056-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../057-libfile-basedir-perl_0.09-1_all.deb ... Unpacking libfile-basedir-perl (0.09-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../058-libnumber-compare-perl_0.03-2_all.deb ... Unpacking libnumber-compare-perl (0.03-2) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../059-libtext-glob-perl_0.11-2_all.deb ... Unpacking libtext-glob-perl (0.11-2) ... Selecting previously unselected package libfile-find-rule-perl. 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Setting up plzip (1.10-4) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-1+b3) ... Setting up libmouse-perl (2.5.10-1+b2) ... Setting up libdata-messagepack-perl (1.02-1) ... Setting up libdynaloader-functions-perl (0.003-2) ... Setting up libtext-glob-perl (0.11-2) ... Setting up libclass-method-modifiers-perl (2.13-2) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b2) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-2) ... Setting up libcpanel-json-xs-perl:amd64 (4.32-1) ... Setting up libhtml-tagset-perl (3.20-5) ... Setting up libdevel-size-perl (0.83-2) ... Setting up unzip (6.0-27) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.84+ds-1) ... Setting up libio-interactive-perl (1.023-1) ... Setting up libtry-tiny-perl (0.31-1) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-3) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2) ... Setting up libencode-locale-perl (1.05-2) ... Setting up libassuan0:amd64 (2.5.5-4) ... Setting up libconfig-tiny-perl (2.28-1) ... Setting up libsereal-encoder-perl:amd64 (4.025+ds-1) ... Setting up liblist-utilsby-perl (0.12-1) ... Setting up libnet-netmask-perl (2.0001-1) ... Setting up libsub-install-perl (0.928-2) ... Setting up libnumber-compare-perl (0.03-2) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.25-1) ... 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Setting up libproc-processtable-perl:amd64 (0.634-1+b1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up gpgconf (2.2.39-1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-2) ... Setting up netbase (6.3) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-4) ... Setting up libsort-versions-perl (1.62-2) ... Setting up libexporter-tiny-perl (1.004000-1) ... Setting up libterm-readkey-perl (2.38-2) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.5-2) ... Setting up libtext-levenshteinxs-perl (0.03-5) ... Setting up libperlio-gzip-perl (0.20-1) ... Setting up libhtml-html5-entities-perl (0.004-2) ... Setting up libsereal-decoder-perl (4.025+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.12-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.39-1) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.05-1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.78-1) ... Setting up libio-socket-ssl-perl (2.075-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libhttp-message-perl (6.37-1) ... Setting up libhtml-form-perl (6.10-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl:amd64 (0.015-2) ... Setting up libcgi-pm-perl (4.54-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.15-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.3) ... Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... Processing triggers for man-db (2.10.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 161028 Build-Time: 214 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 31 Job: clustalx_2.1+lgpl-9 Lintian: pass Machine Architecture: amd64 Package: clustalx Package-Time: 258 Source-Version: 2.1+lgpl-9 Space: 161028 Status: successful Version: 2.1+lgpl-9 -------------------------------------------------------------------------------- Finished at 2022-09-10T10:40:10Z Build needed 00:04:18, 161028k disk space