sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley

+==============================================================================+
| clustalx 2.1+lgpl-9 (riscv64)                Sun, 06 Apr 2025 08:41:16 +0000 |
+==============================================================================+

Package: clustalx
Version: 2.1+lgpl-9
Source Version: 2.1+lgpl-9
Distribution: unstable
Machine Architecture: amd64
Host Architecture: riscv64
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-fd759ccc-26b7-4a96-b824-0f7989cd3ce0' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/clustalx-o5pXuN/resolver-sTKixZ' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://localhost:3142/debian unstable InRelease [205 kB]
Get:2 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB]
Get:3 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB]
Get:4 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB]
Get:5 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
Get:6 http://localhost:3142/debian unstable/non-free Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [698 B]
Get:7 http://localhost:3142/debian unstable/contrib Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [1255 B]
Get:8 http://localhost:3142/debian unstable/main Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [21.6 kB]
Get:6 http://localhost:3142/debian unstable/non-free Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [698 B]
Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [30.2 kB]
Get:8 http://localhost:3142/debian unstable/main Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [21.6 kB]
Get:7 http://localhost:3142/debian unstable/contrib Sources T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [1255 B]
Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-06-0210.58-F-2025-04-06-0210.58.pdiff [30.2 kB]
Get:10 http://localhost:3142/debian unstable/main riscv64 Packages [9763 kB]
Fetched 10.3 MB in 2s (5507 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'clustalx' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/clustalx.git
Please use:
git clone https://salsa.debian.org/med-team/clustalx.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 359 kB of source archives.
Get:1 http://localhost:3142/debian unstable/main clustalx 2.1+lgpl-9 (dsc) [2084 B]
Get:2 http://localhost:3142/debian unstable/main clustalx 2.1+lgpl-9 (tar) [342 kB]
Get:3 http://localhost:3142/debian unstable/main clustalx 2.1+lgpl-9 (diff) [15.2 kB]
Fetched 359 kB in 1s (320 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/clustalx-o5pXuN/clustalx-2.1+lgpl' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/clustalx-o5pXuN' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64
Filtered Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64
dpkg-deb: warning: root directory /<<RESOLVERDIR>>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119
dpkg-deb: hint: you might need to pass --root-owner-group, see <https://wiki.debian.org/Teams/Dpkg/RootlessBuilds> for further details
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [772 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [817 B]
Fetched 2198 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
Execute external solver...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu
  bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu
  crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism
  dwz fakeroot file fontconfig fontconfig-config fonts-dejavu-core
  fonts-dejavu-mono g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu
  gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu
  gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libasan8:riscv64
  libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross
  libavahi-client3 libavahi-client3:riscv64 libavahi-common-data
  libavahi-common-data:riscv64 libavahi-common3 libavahi-common3:riscv64
  libblkid1:riscv64 libbrotli1 libbrotli1:riscv64 libbsd0:riscv64
  libbz2-1.0:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross
  libc6-riscv64-cross libcap2:riscv64 libclang1-19 libcom-err2
  libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcups2t64
  libcups2t64:riscv64 libdbus-1-3 libdbus-1-3:riscv64 libdebhelper-perl
  libdouble-conversion3 libdouble-conversion3:riscv64 libdrm-amdgpu1
  libdrm-amdgpu1:riscv64 libdrm-common libdrm-intel1 libdrm2 libdrm2:riscv64
  libedit2 libedit2:riscv64 libegl-dev:riscv64 libegl-mesa0
  libegl-mesa0:riscv64 libegl1 libegl1:riscv64 libelf1t64 libelf1t64:riscv64
  libevdev2 libevdev2:riscv64 libexpat1 libexpat1:riscv64 libfakeroot libffi8
  libffi8:riscv64 libfile-stripnondeterminism-perl libfontconfig1
  libfontconfig1:riscv64 libfreetype6 libfreetype6:riscv64 libgbm1
  libgbm1:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross
  libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgl-dev:riscv64 libgl1
  libgl1:riscv64 libgl1-mesa-dri libgl1-mesa-dri:riscv64 libglib2.0-0t64
  libglib2.0-0t64:riscv64 libglu1-mesa:riscv64 libglu1-mesa-dev:riscv64
  libglvnd0 libglvnd0:riscv64 libglx-dev:riscv64 libglx-mesa0
  libglx-mesa0:riscv64 libglx0 libglx0:riscv64 libgmp10:riscv64 libgnutls30t64
  libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross
  libgraphite2-3 libgraphite2-3:riscv64 libgssapi-krb5-2
  libgssapi-krb5-2:riscv64 libgudev-1.0-0 libgudev-1.0-0:riscv64 libharfbuzz0b
  libharfbuzz0b:riscv64 libhogweed6t64:riscv64 libice6 libice6:riscv64
  libicu76 libicu76:riscv64 libidn2-0 libidn2-0:riscv64 libinput-bin
  libinput10 libinput10:riscv64 libitm1:riscv64 libitm1-riscv64-cross
  libjpeg62-turbo libjpeg62-turbo:riscv64 libk5crypto3 libk5crypto3:riscv64
  libkeyutils1 libkeyutils1:riscv64 libkrb5-3 libkrb5-3:riscv64
  libkrb5support0 libkrb5support0:riscv64 libllvm19 libllvm19:riscv64
  liblsan0:riscv64 liblsan0-riscv64-cross liblzma5:riscv64 libmagic-mgc
  libmagic1t64 libmd0:riscv64 libmd4c0 libmd4c0:riscv64 libmount1:riscv64
  libmtdev1t64 libmtdev1t64:riscv64 libncursesw6 libnettle8t64:riscv64
  libopengl-dev:riscv64 libopengl0:riscv64 libp11-kit0 libp11-kit0:riscv64
  libpciaccess0 libpcre2-16-0 libpcre2-16-0:riscv64 libpcre2-8-0:riscv64
  libpipeline1 libpng16-16t64 libpng16-16t64:riscv64 libpython3-stdlib
  libpython3.13-minimal libpython3.13-stdlib libqt5concurrent5t64:riscv64
  libqt5core5t64 libqt5core5t64:riscv64 libqt5dbus5t64 libqt5dbus5t64:riscv64
  libqt5designer5 libqt5designercomponents5 libqt5gui5t64
  libqt5gui5t64:riscv64 libqt5help5 libqt5network5t64
  libqt5network5t64:riscv64 libqt5printsupport5t64
  libqt5printsupport5t64:riscv64 libqt5qml5 libqt5qmlmodels5 libqt5quick5
  libqt5quickwidgets5 libqt5sql5-sqlite libqt5sql5t64 libqt5sql5t64:riscv64
  libqt5test5t64:riscv64 libqt5widgets5t64 libqt5widgets5t64:riscv64
  libqt5xml5t64 libqt5xml5t64:riscv64 libreadline8t64 libselinux1:riscv64
  libsensors-config libsensors5 libsensors5:riscv64 libsm6 libsm6:riscv64
  libssl3t64:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross
  libstdc++6:riscv64 libstdc++6-riscv64-cross libsystemd0:riscv64 libtasn1-6
  libtasn1-6:riscv64 libtinfo6:riscv64 libtool libtsan2:riscv64
  libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross
  libuchardet0 libudev1:riscv64 libunistring5 libunistring5:riscv64
  libuuid1:riscv64 libvulkan-dev:riscv64 libvulkan1 libvulkan1:riscv64
  libwacom-common libwacom9 libwacom9:riscv64 libwayland-client0
  libwayland-client0:riscv64 libwayland-server0 libwayland-server0:riscv64
  libx11-6 libx11-6:riscv64 libx11-data libx11-dev:riscv64 libx11-xcb1
  libx11-xcb1:riscv64 libxau-dev:riscv64 libxau6 libxau6:riscv64 libxcb-dri3-0
  libxcb-dri3-0:riscv64 libxcb-glx0 libxcb-glx0:riscv64 libxcb-icccm4
  libxcb-icccm4:riscv64 libxcb-image0 libxcb-image0:riscv64 libxcb-keysyms1
  libxcb-keysyms1:riscv64 libxcb-present0 libxcb-present0:riscv64
  libxcb-randr0 libxcb-randr0:riscv64 libxcb-render-util0
  libxcb-render-util0:riscv64 libxcb-render0 libxcb-render0:riscv64
  libxcb-shape0 libxcb-shape0:riscv64 libxcb-shm0 libxcb-shm0:riscv64
  libxcb-sync1 libxcb-sync1:riscv64 libxcb-util1 libxcb-util1:riscv64
  libxcb-xfixes0 libxcb-xfixes0:riscv64 libxcb-xinerama0
  libxcb-xinerama0:riscv64 libxcb-xinput0 libxcb-xinput0:riscv64 libxcb-xkb1
  libxcb-xkb1:riscv64 libxcb1 libxcb1:riscv64 libxcb1-dev:riscv64
  libxdmcp-dev:riscv64 libxdmcp6 libxdmcp6:riscv64 libxext-dev:riscv64
  libxext6 libxext6:riscv64 libxkbcommon-x11-0 libxkbcommon-x11-0:riscv64
  libxkbcommon0 libxkbcommon0:riscv64 libxml2 libxml2:riscv64 libxrender1
  libxrender1:riscv64 libxshmfence1 libxshmfence1:riscv64 libxxf86vm1
  libxxf86vm1:riscv64 libz3-4 libz3-4:riscv64 libzstd1:riscv64
  linux-libc-dev-riscv64-cross m4 man-db media-types mesa-libgallium
  mesa-libgallium:riscv64 netbase po-debconf python3 python3-minimal
  python3.13 python3.13-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant
  qt5-qmake:riscv64 qt5-qmake-bin qtattributionsscanner-qt5
  qtbase5-dev:riscv64 qtbase5-dev-tools qtchooser qttools5-dev-tools
  readline-common sensible-utils shared-mime-info x11-common x11proto-dev
  xkb-data xorg-sgml-doctools xtrans-dev zlib1g:riscv64
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales
  cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison
  gdb-riscv64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev
  groff glibc-doc:riscv64 libc-l10n:riscv64 locales:riscv64 libnss-nis:riscv64
  libnss-nisplus:riscv64 manpages-dev:riscv64 cups-common cups-common:riscv64
  low-memory-monitor low-memory-monitor:riscv64 gnutls-bin gnutls-bin:riscv64
  krb5-doc krb5-user krb5-doc:riscv64 krb5-user:riscv64 cryptsetup-bin:riscv64
  pciutils libthai0 libthai0:riscv64 qgnomeplatform-qt5
  qt5-image-formats-plugins qgnomeplatform-qt5:riscv64
  qt5-image-formats-plugins:riscv64 qt5-qmltooling-plugins lm-sensors
  lm-sensors:riscv64 libstdc++-14-doc:riscv64 libgcrypt20:riscv64
  liblz4-1:riscv64 libtool-doc gfortran | fortran95-compiler gcj-jdk
  uuid-runtime:riscv64 libwacom-bin libwacom-bin:riscv64 libx11-doc:riscv64
  libxcb-doc:riscv64 libxext-doc:riscv64 m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-tk python3-venv python3.13-venv
  python3.13-doc binfmt-support qt5-doc default-libmysqlclient-dev:riscv64
  firebird-dev:riscv64 libpq-dev:riscv64 libsqlite3-dev:riscv64
  unixodbc-dev:riscv64 readline-doc
Recommended packages:
  curl | wget | lynx dbus dbus:riscv64 libarchive-cpio-perl libglib2.0-data
  xdg-user-dirs libglib2.0-data:riscv64 xdg-user-dirs:riscv64 krb5-locales
  krb5-locales:riscv64 libgpm2 qttranslations5-l10n
  qttranslations5-l10n:riscv64 libqt5svg5 qt5-gtk-platformtheme qtwayland5
  libqt5svg5:riscv64 qt5-gtk-platformtheme:riscv64 qtwayland5:riscv64
  libqt5sql5-sqlite:riscv64 | libqt5sql5-mysql:riscv64
  | libqt5sql5-odbc:riscv64 | libqt5sql5-psql:riscv64 | libqt5sql5-tds:riscv64
  | libqt5sql5-ibase:riscv64 libltdl-dev mesa-vulkan-drivers | vulkan-icd
  mesa-vulkan-drivers:riscv64 | vulkan-icd:riscv64 libmail-sendmail-perl
  ca-certificates libqt5opengl5-dev:riscv64
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu
  bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu
  crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism
  dwz fakeroot file fontconfig fontconfig-config fonts-dejavu-core
  fonts-dejavu-mono g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu
  gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu
  gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libasan8:riscv64
  libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross
  libavahi-client3 libavahi-client3:riscv64 libavahi-common-data
  libavahi-common-data:riscv64 libavahi-common3 libavahi-common3:riscv64
  libblkid1:riscv64 libbrotli1 libbrotli1:riscv64 libbsd0:riscv64
  libbz2-1.0:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross
  libc6-riscv64-cross libcap2:riscv64 libclang1-19 libcom-err2
  libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcups2t64
  libcups2t64:riscv64 libdbus-1-3 libdbus-1-3:riscv64 libdebhelper-perl
  libdouble-conversion3 libdouble-conversion3:riscv64 libdrm-amdgpu1
  libdrm-amdgpu1:riscv64 libdrm-common libdrm-intel1 libdrm2 libdrm2:riscv64
  libedit2 libedit2:riscv64 libegl-dev:riscv64 libegl-mesa0
  libegl-mesa0:riscv64 libegl1 libegl1:riscv64 libelf1t64 libelf1t64:riscv64
  libevdev2 libevdev2:riscv64 libexpat1 libexpat1:riscv64 libfakeroot libffi8
  libffi8:riscv64 libfile-stripnondeterminism-perl libfontconfig1
  libfontconfig1:riscv64 libfreetype6 libfreetype6:riscv64 libgbm1
  libgbm1:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross
  libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgl-dev:riscv64 libgl1
  libgl1:riscv64 libgl1-mesa-dri libgl1-mesa-dri:riscv64 libglib2.0-0t64
  libglib2.0-0t64:riscv64 libglu1-mesa:riscv64 libglu1-mesa-dev:riscv64
  libglvnd0 libglvnd0:riscv64 libglx-dev:riscv64 libglx-mesa0
  libglx-mesa0:riscv64 libglx0 libglx0:riscv64 libgmp10:riscv64 libgnutls30t64
  libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross
  libgraphite2-3 libgraphite2-3:riscv64 libgssapi-krb5-2
  libgssapi-krb5-2:riscv64 libgudev-1.0-0 libgudev-1.0-0:riscv64 libharfbuzz0b
  libharfbuzz0b:riscv64 libhogweed6t64:riscv64 libice6 libice6:riscv64
  libicu76 libicu76:riscv64 libidn2-0 libidn2-0:riscv64 libinput-bin
  libinput10 libinput10:riscv64 libitm1:riscv64 libitm1-riscv64-cross
  libjpeg62-turbo libjpeg62-turbo:riscv64 libk5crypto3 libk5crypto3:riscv64
  libkeyutils1 libkeyutils1:riscv64 libkrb5-3 libkrb5-3:riscv64
  libkrb5support0 libkrb5support0:riscv64 libllvm19 libllvm19:riscv64
  liblsan0:riscv64 liblsan0-riscv64-cross liblzma5:riscv64 libmagic-mgc
  libmagic1t64 libmd0:riscv64 libmd4c0 libmd4c0:riscv64 libmount1:riscv64
  libmtdev1t64 libmtdev1t64:riscv64 libncursesw6 libnettle8t64:riscv64
  libopengl-dev:riscv64 libopengl0:riscv64 libp11-kit0 libp11-kit0:riscv64
  libpciaccess0 libpcre2-16-0 libpcre2-16-0:riscv64 libpcre2-8-0:riscv64
  libpipeline1 libpng16-16t64 libpng16-16t64:riscv64 libpython3-stdlib
  libpython3.13-minimal libpython3.13-stdlib libqt5concurrent5t64:riscv64
  libqt5core5t64 libqt5core5t64:riscv64 libqt5dbus5t64 libqt5dbus5t64:riscv64
  libqt5designer5 libqt5designercomponents5 libqt5gui5t64
  libqt5gui5t64:riscv64 libqt5help5 libqt5network5t64
  libqt5network5t64:riscv64 libqt5printsupport5t64
  libqt5printsupport5t64:riscv64 libqt5qml5 libqt5qmlmodels5 libqt5quick5
  libqt5quickwidgets5 libqt5sql5-sqlite libqt5sql5t64 libqt5sql5t64:riscv64
  libqt5test5t64:riscv64 libqt5widgets5t64 libqt5widgets5t64:riscv64
  libqt5xml5t64 libqt5xml5t64:riscv64 libreadline8t64 libselinux1:riscv64
  libsensors-config libsensors5 libsensors5:riscv64 libsm6 libsm6:riscv64
  libssl3t64:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross
  libstdc++6:riscv64 libstdc++6-riscv64-cross libsystemd0:riscv64 libtasn1-6
  libtasn1-6:riscv64 libtinfo6:riscv64 libtool libtsan2:riscv64
  libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross
  libuchardet0 libudev1:riscv64 libunistring5 libunistring5:riscv64
  libuuid1:riscv64 libvulkan-dev:riscv64 libvulkan1 libvulkan1:riscv64
  libwacom-common libwacom9 libwacom9:riscv64 libwayland-client0
  libwayland-client0:riscv64 libwayland-server0 libwayland-server0:riscv64
  libx11-6 libx11-6:riscv64 libx11-data libx11-dev:riscv64 libx11-xcb1
  libx11-xcb1:riscv64 libxau-dev:riscv64 libxau6 libxau6:riscv64 libxcb-dri3-0
  libxcb-dri3-0:riscv64 libxcb-glx0 libxcb-glx0:riscv64 libxcb-icccm4
  libxcb-icccm4:riscv64 libxcb-image0 libxcb-image0:riscv64 libxcb-keysyms1
  libxcb-keysyms1:riscv64 libxcb-present0 libxcb-present0:riscv64
  libxcb-randr0 libxcb-randr0:riscv64 libxcb-render-util0
  libxcb-render-util0:riscv64 libxcb-render0 libxcb-render0:riscv64
  libxcb-shape0 libxcb-shape0:riscv64 libxcb-shm0 libxcb-shm0:riscv64
  libxcb-sync1 libxcb-sync1:riscv64 libxcb-util1 libxcb-util1:riscv64
  libxcb-xfixes0 libxcb-xfixes0:riscv64 libxcb-xinerama0
  libxcb-xinerama0:riscv64 libxcb-xinput0 libxcb-xinput0:riscv64 libxcb-xkb1
  libxcb-xkb1:riscv64 libxcb1 libxcb1:riscv64 libxcb1-dev:riscv64
  libxdmcp-dev:riscv64 libxdmcp6 libxdmcp6:riscv64 libxext-dev:riscv64
  libxext6 libxext6:riscv64 libxkbcommon-x11-0 libxkbcommon-x11-0:riscv64
  libxkbcommon0 libxkbcommon0:riscv64 libxml2 libxml2:riscv64 libxrender1
  libxrender1:riscv64 libxshmfence1 libxshmfence1:riscv64 libxxf86vm1
  libxxf86vm1:riscv64 libz3-4 libz3-4:riscv64 libzstd1:riscv64
  linux-libc-dev-riscv64-cross m4 man-db media-types mesa-libgallium
  mesa-libgallium:riscv64 netbase po-debconf python3 python3-minimal
  python3.13 python3.13-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant
  qt5-qmake:riscv64 qt5-qmake-bin qtattributionsscanner-qt5
  qtbase5-dev:riscv64 qtbase5-dev-tools qtchooser qttools5-dev-tools
  readline-common sbuild-build-depends-main-dummy:riscv64 sensible-utils
  shared-mime-info x11-common x11proto-dev xkb-data xorg-sgml-doctools
  xtrans-dev zlib1g:riscv64
0 upgraded, 337 newly installed, 0 to remove and 0 not upgraded.
Need to get 304 MB of archives.
After this operation, 1388 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B]
Get:2 http://localhost:3142/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.2-3 [861 kB]
Get:3 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.7.1-1 [108 kB]
Get:4 http://localhost:3142/debian unstable/main amd64 python3.13-minimal amd64 3.13.2-3 [2212 kB]
Get:5 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get:6 http://localhost:3142/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB]
Get:7 http://localhost:3142/debian unstable/main amd64 netbase all 6.5 [12.4 kB]
Get:8 http://localhost:3142/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get:9 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB]
Get:10 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB]
Get:11 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get:12 http://localhost:3142/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.2-3 [1952 kB]
Get:13 http://localhost:3142/debian unstable/main amd64 python3.13 amd64 3.13.2-3 [746 kB]
Get:14 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get:15 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get:16 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get:17 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-4 [337 kB]
Get:18 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-4 [109 kB]
Get:19 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-4 [43.5 kB]
Get:20 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get:21 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get:22 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get:23 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41-3 [94.4 kB]
Get:24 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get:25 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get:26 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-7 [294 kB]
Get:27 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get:28 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB]
Get:29 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB]
Get:30 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB]
Get:31 http://localhost:3142/debian unstable/main amd64 binutils-riscv64-linux-gnu amd64 2.44-3 [1428 kB]
Get:32 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu-base amd64 14.2.0-19cross1 [49.6 kB]
Get:33 http://localhost:3142/debian unstable/main amd64 cpp-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [13.3 MB]
Get:34 http://localhost:3142/debian unstable/main amd64 cpp-riscv64-linux-gnu amd64 4:14.2.0-1 [4848 B]
Get:35 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB]
Get:36 http://localhost:3142/debian unstable/main amd64 libc6-riscv64-cross all 2.41-6cross2 [1169 kB]
Get:37 http://localhost:3142/debian unstable/main amd64 libgcc-s1-riscv64-cross all 14.2.0-19cross1 [56.8 kB]
Get:38 http://localhost:3142/debian unstable/main amd64 libgomp1-riscv64-cross all 14.2.0-19cross1 [128 kB]
Get:39 http://localhost:3142/debian unstable/main amd64 libitm1-riscv64-cross all 14.2.0-19cross1 [25.2 kB]
Get:40 http://localhost:3142/debian unstable/main amd64 libatomic1-riscv64-cross all 14.2.0-19cross1 [8316 B]
Get:41 http://localhost:3142/debian unstable/main amd64 libasan8-riscv64-cross all 14.2.0-19cross1 [2354 kB]
Get:42 http://localhost:3142/debian unstable/main amd64 liblsan0-riscv64-cross all 14.2.0-19cross1 [1076 kB]
Get:43 http://localhost:3142/debian unstable/main amd64 libtsan2-riscv64-cross all 14.2.0-19cross1 [2230 kB]
Get:44 http://localhost:3142/debian unstable/main amd64 libstdc++6-riscv64-cross all 14.2.0-19cross1 [660 kB]
Get:45 http://localhost:3142/debian unstable/main amd64 libubsan1-riscv64-cross all 14.2.0-19cross1 [978 kB]
Get:46 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-riscv64-cross all 14.2.0-19cross1 [5178 kB]
Get:47 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [25.7 MB]
Get:48 http://localhost:3142/debian unstable/main amd64 gcc-riscv64-linux-gnu amd64 4:14.2.0-1 [1444 B]
Get:49 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-riscv64-cross all 6.12.17-1cross2 [2339 kB]
Get:50 http://localhost:3142/debian unstable/main amd64 libc6-dev-riscv64-cross all 2.41-6cross2 [3123 kB]
Get:51 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-riscv64-cross all 14.2.0-19cross1 [4940 kB]
Get:52 http://localhost:3142/debian unstable/main amd64 g++-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [14.3 MB]
Get:53 http://localhost:3142/debian unstable/main amd64 g++-riscv64-linux-gnu amd64 4:14.2.0-1 [1200 B]
Get:54 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-riscv64 all 12.12 [3544 B]
Get:55 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB]
Get:56 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB]
Get:57 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get:58 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get:59 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get:60 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get:61 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get:62 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get:63 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB]
Get:64 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB]
Get:65 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get:66 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:67 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:68 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.2 [919 kB]
Get:69 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.1-1 [29.6 kB]
Get:70 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.1-1 [76.0 kB]
Get:71 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get:72 http://localhost:3142/debian unstable/main amd64 libpng16-16t64 amd64 1.6.47-1.1 [282 kB]
Get:73 http://localhost:3142/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get:74 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get:75 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get:76 http://localhost:3142/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.2 [318 kB]
Get:77 http://localhost:3142/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.2 [391 kB]
Get:78 http://localhost:3142/debian unstable/main amd64 fontconfig amd64 2.15.0-2.2 [463 kB]
Get:79 http://localhost:3142/debian unstable/main riscv64 gcc-14-base riscv64 14.2.0-19 [49.4 kB]
Get:80 http://localhost:3142/debian unstable/main riscv64 libgcc-s1 riscv64 14.2.0-19 [56.8 kB]
Get:81 http://localhost:3142/debian unstable/main riscv64 libc6 riscv64 2.41-6 [2465 kB]
Get:82 http://localhost:3142/debian unstable/main riscv64 libasan8 riscv64 14.2.0-19 [2365 kB]
Get:83 http://localhost:3142/debian unstable/main riscv64 libatomic1 riscv64 14.2.0-19 [8672 B]
Get:84 http://localhost:3142/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB]
Get:85 http://localhost:3142/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB]
Get:86 http://localhost:3142/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-2 [178 kB]
Get:87 http://localhost:3142/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB]
Get:88 http://localhost:3142/debian unstable/main riscv64 libavahi-common-data riscv64 0.8-16 [112 kB]
Get:89 http://localhost:3142/debian unstable/main riscv64 libavahi-common3 riscv64 0.8-16 [44.4 kB]
Get:90 http://localhost:3142/debian unstable/main riscv64 libcap2 riscv64 1:2.75-4 [28.4 kB]
Get:91 http://localhost:3142/debian unstable/main riscv64 libsystemd0 riscv64 257.4-9 [469 kB]
Get:92 http://localhost:3142/debian unstable/main riscv64 libdbus-1-3 riscv64 1.16.2-2 [181 kB]
Get:93 http://localhost:3142/debian unstable/main riscv64 libavahi-client3 riscv64 0.8-16 [47.7 kB]
Get:94 http://localhost:3142/debian unstable/main riscv64 libblkid1 riscv64 2.41-3 [192 kB]
Get:95 http://localhost:3142/debian unstable/main riscv64 libbrotli1 riscv64 1.1.0-2+b7 [358 kB]
Get:96 http://localhost:3142/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b1 [37.6 kB]
Get:97 http://localhost:3142/debian unstable/main riscv64 libbsd0 riscv64 0.12.2-2 [132 kB]
Get:98 http://localhost:3142/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB]
Get:99 http://localhost:3142/debian unstable/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB]
Get:100 http://localhost:3142/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB]
Get:101 http://localhost:3142/debian unstable/main riscv64 libc6-dev riscv64 2.41-6 [3127 kB]
Get:102 http://localhost:3142/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB]
Get:103 http://localhost:3142/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get:104 http://localhost:3142/debian unstable/main amd64 libllvm19 amd64 1:19.1.7-3 [26.0 MB]
Get:105 http://localhost:3142/debian unstable/main amd64 libclang1-19 amd64 1:19.1.7-3 [7638 kB]
Get:106 http://localhost:3142/debian unstable/main riscv64 libcom-err2 riscv64 1.47.2-1+b1 [24.0 kB]
Get:107 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1+b1 [24.3 kB]
Get:108 http://localhost:3142/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-3 [558 kB]
Get:109 http://localhost:3142/debian unstable/main riscv64 libnettle8t64 riscv64 3.10.1-1 [335 kB]
Get:110 http://localhost:3142/debian unstable/main riscv64 libhogweed6t64 riscv64 3.10.1-1 [336 kB]
Get:111 http://localhost:3142/debian unstable/main riscv64 libunistring5 riscv64 1.3-2 [474 kB]
Get:112 http://localhost:3142/debian unstable/main riscv64 libidn2-0 riscv64 2.3.8-2 [109 kB]
Get:113 http://localhost:3142/debian unstable/main riscv64 libffi8 riscv64 3.4.7-1 [21.6 kB]
Get:114 http://localhost:3142/debian unstable/main riscv64 libp11-kit0 riscv64 0.25.5-3 [444 kB]
Get:115 http://localhost:3142/debian unstable/main riscv64 libtasn1-6 riscv64 4.20.0-2 [50.6 kB]
Get:116 http://localhost:3142/debian unstable/main riscv64 libgnutls30t64 riscv64 3.8.9-2 [1445 kB]
Get:117 http://localhost:3142/debian unstable/main riscv64 libkrb5support0 riscv64 1.21.3-5 [34.0 kB]
Get:118 http://localhost:3142/debian unstable/main riscv64 libk5crypto3 riscv64 1.21.3-5 [100 kB]
Get:119 http://localhost:3142/debian unstable/main riscv64 libkeyutils1 riscv64 1.6.3-5 [9336 B]
Get:120 http://localhost:3142/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-1 [360 kB]
Get:121 http://localhost:3142/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB]
Get:122 http://localhost:3142/debian unstable/main riscv64 libssl3t64 riscv64 3.4.1-1 [2098 kB]
Get:123 http://localhost:3142/debian unstable/main riscv64 libkrb5-3 riscv64 1.21.3-5 [334 kB]
Get:124 http://localhost:3142/debian unstable/main riscv64 libgssapi-krb5-2 riscv64 1.21.3-5 [143 kB]
Get:125 http://localhost:3142/debian unstable/main riscv64 libcups2t64 riscv64 2.4.10-2+b1 [251 kB]
Get:126 http://localhost:3142/debian unstable/main amd64 libidn2-0 amd64 2.3.8-2 [109 kB]
Get:127 http://localhost:3142/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get:128 http://localhost:3142/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get:129 http://localhost:3142/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get:130 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB]
Get:131 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB]
Get:132 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-5 [9316 B]
Get:133 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB]
Get:134 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB]
Get:135 http://localhost:3142/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB]
Get:136 http://localhost:3142/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.1-1 [41.8 kB]
Get:137 http://localhost:3142/debian unstable/main riscv64 libstdc++6 riscv64 14.2.0-19 [707 kB]
Get:138 http://localhost:3142/debian unstable/main riscv64 libdouble-conversion3 riscv64 3.3.1-1 [41.1 kB]
Get:139 http://localhost:3142/debian unstable/main amd64 libdrm-common all 2.4.124-2 [8288 B]
Get:140 http://localhost:3142/debian unstable/main riscv64 libdrm2 riscv64 2.4.124-2 [40.1 kB]
Get:141 http://localhost:3142/debian unstable/main riscv64 libdrm-amdgpu1 riscv64 2.4.124-2 [22.2 kB]
Get:142 http://localhost:3142/debian unstable/main amd64 libdrm2 amd64 2.4.124-2 [39.0 kB]
Get:143 http://localhost:3142/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.124-2 [22.6 kB]
Get:144 http://localhost:3142/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB]
Get:145 http://localhost:3142/debian unstable/main amd64 libdrm-intel1 amd64 2.4.124-2 [64.1 kB]
Get:146 http://localhost:3142/debian unstable/main riscv64 libtinfo6 riscv64 6.5+20250216-2 [347 kB]
Get:147 http://localhost:3142/debian unstable/main riscv64 libedit2 riscv64 3.1-20250104-1 [92.5 kB]
Get:148 http://localhost:3142/debian unstable/main riscv64 libglvnd0 riscv64 1.7.0-1+b2 [62.6 kB]
Get:149 http://localhost:3142/debian unstable/main riscv64 libexpat1 riscv64 2.7.1-1 [101 kB]
Get:150 http://localhost:3142/debian unstable/main riscv64 libwayland-server0 riscv64 1.23.1-3 [34.6 kB]
Get:151 http://localhost:3142/debian unstable/main riscv64 libelf1t64 riscv64 0.192-4 [194 kB]
Get:152 http://localhost:3142/debian unstable/main riscv64 liblzma5 riscv64 5.8.1-1 [313 kB]
Get:153 http://localhost:3142/debian unstable/main riscv64 libxml2 riscv64 2.12.7+dfsg+really2.9.14-0.4 [708 kB]
Get:154 http://localhost:3142/debian unstable/main riscv64 libz3-4 riscv64 4.13.3-1 [8514 kB]
Get:155 http://localhost:3142/debian unstable/main riscv64 libllvm19 riscv64 1:19.1.7-3 [24.9 MB]
Get:156 http://localhost:3142/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB]
Get:157 http://localhost:3142/debian unstable/main riscv64 libsensors5 riscv64 1:3.6.0-10+b1 [34.7 kB]
Get:158 http://localhost:3142/debian unstable/main riscv64 libxau6 riscv64 1:1.0.11-1 [20.5 kB]
Get:159 http://localhost:3142/debian unstable/main riscv64 libxdmcp6 riscv64 1:1.1.5-1 [28.0 kB]
Get:160 http://localhost:3142/debian unstable/main riscv64 libxcb1 riscv64 1.17.0-2+b1 [145 kB]
Get:161 http://localhost:3142/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB]
Get:162 http://localhost:3142/debian unstable/main riscv64 libx11-6 riscv64 2:1.8.12-1 [817 kB]
Get:163 http://localhost:3142/debian unstable/main riscv64 libx11-xcb1 riscv64 2:1.8.12-1 [247 kB]
Get:164 http://localhost:3142/debian unstable/main riscv64 libxcb-dri3-0 riscv64 1.17.0-2+b1 [107 kB]
Get:165 http://localhost:3142/debian unstable/main riscv64 libxcb-present0 riscv64 1.17.0-2+b1 [105 kB]
Get:166 http://localhost:3142/debian unstable/main riscv64 libxcb-randr0 riscv64 1.17.0-2+b1 [117 kB]
Get:167 http://localhost:3142/debian unstable/main riscv64 libxcb-sync1 riscv64 1.17.0-2+b1 [109 kB]
Get:168 http://localhost:3142/debian unstable/main riscv64 libxcb-xfixes0 riscv64 1.17.0-2+b1 [109 kB]
Get:169 http://localhost:3142/debian unstable/main riscv64 libxshmfence1 riscv64 1.3.3-1 [10.9 kB]
Get:170 http://localhost:3142/debian unstable/main riscv64 mesa-libgallium riscv64 25.0.3-1 [7262 kB]
Get:171 http://localhost:3142/debian unstable/main riscv64 libgbm1 riscv64 25.0.3-1 [45.8 kB]
Get:172 http://localhost:3142/debian unstable/main riscv64 libwayland-client0 riscv64 1.23.1-3 [26.9 kB]
Get:173 http://localhost:3142/debian unstable/main riscv64 libxcb-shm0 riscv64 1.17.0-2+b1 [105 kB]
Get:174 http://localhost:3142/debian unstable/main riscv64 libegl-mesa0 riscv64 25.0.3-1 [127 kB]
Get:175 http://localhost:3142/debian unstable/main riscv64 libegl1 riscv64 1.7.0-1+b2 [35.9 kB]
Get:176 http://localhost:3142/debian unstable/main riscv64 libxcb-glx0 riscv64 1.17.0-2+b1 [123 kB]
Get:177 http://localhost:3142/debian unstable/main riscv64 libxext6 riscv64 2:1.3.4-1+b3 [51.7 kB]
Get:178 http://localhost:3142/debian unstable/main riscv64 libxxf86vm1 riscv64 1:1.1.4-1+b4 [19.8 kB]
Get:179 http://localhost:3142/debian unstable/main riscv64 libvulkan1 riscv64 1.4.309.0-1 [129 kB]
Get:180 http://localhost:3142/debian unstable/main riscv64 libgl1-mesa-dri riscv64 25.0.3-1 [44.3 kB]
Get:181 http://localhost:3142/debian unstable/main riscv64 libglx-mesa0 riscv64 25.0.3-1 [162 kB]
Get:182 http://localhost:3142/debian unstable/main riscv64 libglx0 riscv64 1.7.0-1+b2 [30.8 kB]
Get:183 http://localhost:3142/debian unstable/main riscv64 libgl1 riscv64 1.7.0-1+b2 [115 kB]
Get:184 http://localhost:3142/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get:185 http://localhost:3142/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB]
Get:186 http://localhost:3142/debian unstable/main riscv64 libxau-dev riscv64 1:1.0.11-1 [27.6 kB]
Get:187 http://localhost:3142/debian unstable/main riscv64 libxdmcp-dev riscv64 1:1.1.5-1 [52.9 kB]
Get:188 http://localhost:3142/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB]
Get:189 http://localhost:3142/debian unstable/main riscv64 libxcb1-dev riscv64 1.17.0-2+b1 [241 kB]
Get:190 http://localhost:3142/debian unstable/main riscv64 libx11-dev riscv64 2:1.8.12-1 [1408 kB]
Get:191 http://localhost:3142/debian unstable/main riscv64 libglx-dev riscv64 1.7.0-1+b2 [15.8 kB]
Get:192 http://localhost:3142/debian unstable/main riscv64 libgl-dev riscv64 1.7.0-1+b2 [101 kB]
Get:193 http://localhost:3142/debian unstable/main riscv64 libegl-dev riscv64 1.7.0-1+b2 [19.5 kB]
Get:194 http://localhost:3142/debian unstable/main amd64 libwayland-server0 amd64 1.23.1-3 [34.4 kB]
Get:195 http://localhost:3142/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB]
Get:196 http://localhost:3142/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get:197 http://localhost:3142/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get:198 http://localhost:3142/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get:199 http://localhost:3142/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB]
Get:200 http://localhost:3142/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.12-1 [247 kB]
Get:201 http://localhost:3142/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB]
Get:202 http://localhost:3142/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB]
Get:203 http://localhost:3142/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB]
Get:204 http://localhost:3142/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB]
Get:205 http://localhost:3142/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB]
Get:206 http://localhost:3142/debian unstable/main amd64 libxshmfence1 amd64 1.3.3-1 [10.9 kB]
Get:207 http://localhost:3142/debian unstable/main amd64 mesa-libgallium amd64 25.0.3-1 [9624 kB]
Get:208 http://localhost:3142/debian unstable/main amd64 libgbm1 amd64 25.0.3-1 [44.2 kB]
Get:209 http://localhost:3142/debian unstable/main amd64 libwayland-client0 amd64 1.23.1-3 [26.8 kB]
Get:210 http://localhost:3142/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get:211 http://localhost:3142/debian unstable/main amd64 libegl-mesa0 amd64 25.0.3-1 [128 kB]
Get:212 http://localhost:3142/debian unstable/main amd64 libevdev2 amd64 1.13.4+dfsg-1 [32.4 kB]
Get:213 http://localhost:3142/debian unstable/main riscv64 libevdev2 riscv64 1.13.4+dfsg-1 [29.6 kB]
Get:214 http://localhost:3142/debian unstable/main riscv64 libpng16-16t64 riscv64 1.6.47-1.1 [285 kB]
Get:215 http://localhost:3142/debian unstable/main riscv64 libfreetype6 riscv64 2.13.3+dfsg-1 [467 kB]
Get:216 http://localhost:3142/debian unstable/main riscv64 libfontconfig1 riscv64 2.15.0-2.2 [398 kB]
Get:217 http://localhost:3142/debian unstable/main riscv64 libgomp1 riscv64 14.2.0-19 [130 kB]
Get:218 http://localhost:3142/debian unstable/main riscv64 libitm1 riscv64 14.2.0-19 [25.8 kB]
Get:219 http://localhost:3142/debian unstable/main riscv64 liblsan0 riscv64 14.2.0-19 [1078 kB]
Get:220 http://localhost:3142/debian unstable/main riscv64 libtsan2 riscv64 14.2.0-19 [2241 kB]
Get:221 http://localhost:3142/debian unstable/main riscv64 libubsan1 riscv64 14.2.0-19 [979 kB]
Get:222 http://localhost:3142/debian unstable/main riscv64 libgcc-14-dev riscv64 14.2.0-19 [5190 kB]
Get:223 http://localhost:3142/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB]
Get:224 http://localhost:3142/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB]
Get:225 http://localhost:3142/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get:226 http://localhost:3142/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB]
Get:227 http://localhost:3142/debian unstable/main amd64 libvulkan1 amd64 1.4.309.0-1 [130 kB]
Get:228 http://localhost:3142/debian unstable/main amd64 libgl1-mesa-dri amd64 25.0.3-1 [45.7 kB]
Get:229 http://localhost:3142/debian unstable/main amd64 libglx-mesa0 amd64 25.0.3-1 [143 kB]
Get:230 http://localhost:3142/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB]
Get:231 http://localhost:3142/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB]
Get:232 http://localhost:3142/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.45-1 [300 kB]
Get:233 http://localhost:3142/debian unstable/main riscv64 libselinux1 riscv64 3.8.1-1 [88.1 kB]
Get:234 http://localhost:3142/debian unstable/main riscv64 libmount1 riscv64 2.41-3 [225 kB]
Get:235 http://localhost:3142/debian unstable/main riscv64 libglib2.0-0t64 riscv64 2.84.1-1 [1526 kB]
Get:236 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.1-1 [1514 kB]
Get:237 http://localhost:3142/debian unstable/main riscv64 libopengl0 riscv64 1.7.0-1+b2 [40.4 kB]
Get:238 http://localhost:3142/debian unstable/main riscv64 libglu1-mesa riscv64 9.0.2-1.1+b3 [180 kB]
Get:239 http://localhost:3142/debian unstable/main riscv64 libopengl-dev riscv64 1.7.0-1+b2 [5372 B]
Get:240 http://localhost:3142/debian unstable/main riscv64 libglu1-mesa-dev riscv64 9.0.2-1.1+b3 [546 kB]
Get:241 http://localhost:3142/debian unstable/main riscv64 libgraphite2-3 riscv64 1.3.14-2+b1 [78.1 kB]
Get:242 http://localhost:3142/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get:243 http://localhost:3142/debian unstable/main riscv64 libudev1 riscv64 257.4-9 [153 kB]
Get:244 http://localhost:3142/debian unstable/main riscv64 libgudev-1.0-0 riscv64 238-6 [14.1 kB]
Get:245 http://localhost:3142/debian unstable/main amd64 libgudev-1.0-0 amd64 238-6 [14.5 kB]
Get:246 http://localhost:3142/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1+b1 [479 kB]
Get:247 http://localhost:3142/debian unstable/main riscv64 libharfbuzz0b riscv64 10.2.0-1+b1 [533 kB]
Get:248 http://localhost:3142/debian unstable/main amd64 x11-common all 1:7.7+24 [217 kB]
Get:249 http://localhost:3142/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get:250 http://localhost:3142/debian unstable/main riscv64 libice6 riscv64 2:1.1.1-1 [64.8 kB]
Get:251 http://localhost:3142/debian unstable/main riscv64 libicu76 riscv64 76.1-3 [9698 kB]
Get:252 http://localhost:3142/debian unstable/main amd64 libicu76 amd64 76.1-3 [9721 kB]
Get:253 http://localhost:3142/debian unstable/main amd64 libwacom-common all 2.14.0-1 [103 kB]
Get:254 http://localhost:3142/debian unstable/main amd64 libwacom9 amd64 2.14.0-1 [25.3 kB]
Get:255 http://localhost:3142/debian unstable/main amd64 libinput-bin amd64 1.28.1-1 [26.3 kB]
Get:256 http://localhost:3142/debian unstable/main amd64 libmtdev1t64 amd64 1.1.7-1 [22.6 kB]
Get:257 http://localhost:3142/debian unstable/main amd64 libinput10 amd64 1.28.1-1 [143 kB]
Get:258 http://localhost:3142/debian unstable/main riscv64 libmtdev1t64 riscv64 1.1.7-1 [22.6 kB]
Get:259 http://localhost:3142/debian unstable/main riscv64 libwacom9 riscv64 2.14.0-1 [24.4 kB]
Get:260 http://localhost:3142/debian unstable/main riscv64 libinput10 riscv64 1.28.1-1 [143 kB]
Get:261 http://localhost:3142/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get:262 http://localhost:3142/debian unstable/main riscv64 libjpeg62-turbo riscv64 1:2.1.5-3.1 [155 kB]
Get:263 http://localhost:3142/debian unstable/main riscv64 libmd4c0 riscv64 0.5.2-2+b1 [49.6 kB]
Get:264 http://localhost:3142/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB]
Get:265 http://localhost:3142/debian unstable/main riscv64 libpcre2-16-0 riscv64 10.45-1 [277 kB]
Get:266 http://localhost:3142/debian unstable/main amd64 libpcre2-16-0 amd64 10.45-1 [281 kB]
Get:267 http://localhost:3142/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b2 [760 kB]
Get:268 http://localhost:3142/debian unstable/main riscv64 libqt5core5t64 riscv64 5.15.15+dfsg-5 [1938 kB]
Get:269 http://localhost:3142/debian unstable/main riscv64 libqt5concurrent5t64 riscv64 5.15.15+dfsg-5 [44.7 kB]
Get:270 http://localhost:3142/debian unstable/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-5 [1872 kB]
Get:271 http://localhost:3142/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-5 [217 kB]
Get:272 http://localhost:3142/debian unstable/main riscv64 libqt5dbus5t64 riscv64 5.15.15+dfsg-5 [222 kB]
Get:273 http://localhost:3142/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB]
Get:274 http://localhost:3142/debian unstable/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-5 [682 kB]
Get:275 http://localhost:3142/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1 [37.3 kB]
Get:276 http://localhost:3142/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB]
Get:277 http://localhost:3142/debian unstable/main amd64 libxcb-util1 amd64 0.4.1-1 [23.5 kB]
Get:278 http://localhost:3142/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB]
Get:279 http://localhost:3142/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [16.7 kB]
Get:280 http://localhost:3142/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get:281 http://localhost:3142/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.10-1 [18.4 kB]
Get:282 http://localhost:3142/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB]
Get:283 http://localhost:3142/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB]
Get:284 http://localhost:3142/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB]
Get:285 http://localhost:3142/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB]
Get:286 http://localhost:3142/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB]
Get:287 http://localhost:3142/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB]
Get:288 http://localhost:3142/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [16.2 kB]
Get:289 http://localhost:3142/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB]
Get:290 http://localhost:3142/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-5 [3497 kB]
Get:291 http://localhost:3142/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-5 [2398 kB]
Get:292 http://localhost:3142/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-5 [126 kB]
Get:293 http://localhost:3142/debian unstable/main amd64 libqt5designer5 amd64 5.15.15-6 [2758 kB]
Get:294 http://localhost:3142/debian unstable/main amd64 libqt5designercomponents5 amd64 5.15.15-6 [736 kB]
Get:295 http://localhost:3142/debian unstable/main riscv64 libqt5network5t64 riscv64 5.15.15+dfsg-5 [700 kB]
Get:296 http://localhost:3142/debian unstable/main riscv64 libuuid1 riscv64 2.41-3 [39.6 kB]
Get:297 http://localhost:3142/debian unstable/main riscv64 libsm6 riscv64 2:1.2.6-1 [37.3 kB]
Get:298 http://localhost:3142/debian unstable/main riscv64 libxcb-icccm4 riscv64 0.4.2-1 [26.9 kB]
Get:299 http://localhost:3142/debian unstable/main riscv64 libxcb-util1 riscv64 0.4.1-1 [23.2 kB]
Get:300 http://localhost:3142/debian unstable/main riscv64 libxcb-image0 riscv64 0.4.0-2+b2 [22.2 kB]
Get:301 http://localhost:3142/debian unstable/main riscv64 libxcb-keysyms1 riscv64 0.4.1-1 [16.6 kB]
Get:302 http://localhost:3142/debian unstable/main riscv64 libxcb-render0 riscv64 1.17.0-2+b1 [115 kB]
Get:303 http://localhost:3142/debian unstable/main riscv64 libxcb-render-util0 riscv64 0.3.10-1 [18.4 kB]
Get:304 http://localhost:3142/debian unstable/main riscv64 libxcb-shape0 riscv64 1.17.0-2+b1 [106 kB]
Get:305 http://localhost:3142/debian unstable/main riscv64 libxcb-xinerama0 riscv64 1.17.0-2+b1 [105 kB]
Get:306 http://localhost:3142/debian unstable/main riscv64 libxcb-xinput0 riscv64 1.17.0-2+b1 [130 kB]
Get:307 http://localhost:3142/debian unstable/main riscv64 libxcb-xkb1 riscv64 1.17.0-2+b1 [130 kB]
Get:308 http://localhost:3142/debian unstable/main riscv64 libxkbcommon0 riscv64 1.7.0-2 [112 kB]
Get:309 http://localhost:3142/debian unstable/main riscv64 libxkbcommon-x11-0 riscv64 1.7.0-2 [15.3 kB]
Get:310 http://localhost:3142/debian unstable/main riscv64 libxrender1 riscv64 1:0.9.12-1 [28.5 kB]
Get:311 http://localhost:3142/debian unstable/main riscv64 libqt5gui5t64 riscv64 5.15.15+dfsg-5 [3277 kB]
Get:312 http://localhost:3142/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-5 [125 kB]
Get:313 http://localhost:3142/debian unstable/main amd64 libqt5help5 amd64 5.15.15-6 [151 kB]
Get:314 http://localhost:3142/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-5 [206 kB]
Get:315 http://localhost:3142/debian unstable/main riscv64 libqt5widgets5t64 riscv64 5.15.15+dfsg-5 [2491 kB]
Get:316 http://localhost:3142/debian unstable/main riscv64 libqt5printsupport5t64 riscv64 5.15.15+dfsg-5 [207 kB]
Get:317 http://localhost:3142/debian unstable/main amd64 libqt5qml5 amd64 5.15.15+dfsg-3 [1377 kB]
Get:318 http://localhost:3142/debian unstable/main amd64 libqt5qmlmodels5 amd64 5.15.15+dfsg-3 [193 kB]
Get:319 http://localhost:3142/debian unstable/main amd64 libqt5quick5 amd64 5.15.15+dfsg-3 [1610 kB]
Get:320 http://localhost:3142/debian unstable/main amd64 libqt5quickwidgets5 amd64 5.15.15+dfsg-3 [40.2 kB]
Get:321 http://localhost:3142/debian unstable/main amd64 libqt5sql5-sqlite amd64 5.15.15+dfsg-5 [59.5 kB]
Get:322 http://localhost:3142/debian unstable/main riscv64 libqt5sql5t64 riscv64 5.15.15+dfsg-5 [127 kB]
Get:323 http://localhost:3142/debian unstable/main riscv64 libqt5test5t64 riscv64 5.15.15+dfsg-5 [146 kB]
Get:324 http://localhost:3142/debian unstable/main riscv64 libqt5xml5t64 riscv64 5.15.15+dfsg-5 [129 kB]
Get:325 http://localhost:3142/debian unstable/main riscv64 libstdc++-14-dev riscv64 14.2.0-19 [5276 kB]
Get:326 http://localhost:3142/debian unstable/main riscv64 libvulkan-dev riscv64 1.4.309.0-1 [1556 kB]
Get:327 http://localhost:3142/debian unstable/main riscv64 libxext-dev riscv64 2:1.3.4-1+b3 [147 kB]
Get:328 http://localhost:3142/debian unstable/main amd64 qtchooser amd64 66-2 [26.3 kB]
Get:329 http://localhost:3142/debian unstable/main amd64 qdoc-qt5 amd64 5.15.15-6 [593 kB]
Get:330 http://localhost:3142/debian unstable/main amd64 qhelpgenerator-qt5 amd64 5.15.15-6 [61.3 kB]
Get:331 http://localhost:3142/debian unstable/main amd64 qt5-assistant amd64 5.15.15-6 [352 kB]
Get:332 http://localhost:3142/debian unstable/main amd64 qt5-qmake-bin amd64 5.15.15+dfsg-5 [1066 kB]
Get:333 http://localhost:3142/debian unstable/main riscv64 qt5-qmake riscv64 5.15.15+dfsg-5 [224 kB]
Get:334 http://localhost:3142/debian unstable/main amd64 qtattributionsscanner-qt5 amd64 5.15.15-6 [33.0 kB]
Get:335 http://localhost:3142/debian unstable/main amd64 qtbase5-dev-tools amd64 5.15.15+dfsg-5 [777 kB]
Get:336 http://localhost:3142/debian unstable/main riscv64 qtbase5-dev riscv64 5.15.15+dfsg-5 [1225 kB]
Get:337 http://localhost:3142/debian unstable/main amd64 qttools5-dev-tools amd64 5.15.15-6 [1045 kB]
Preconfiguring packages ...
Fetched 304 MB in 2s (194 MB/s)
Selecting previously unselected package libpython3.13-minimal:amd64.
(Reading database ... 12877 files and directories currently installed.)
Preparing to unpack .../libpython3.13-minimal_3.13.2-3_amd64.deb ...
Unpacking libpython3.13-minimal:amd64 (3.13.2-3) ...
Selecting previously unselected package libexpat1:amd64.
Preparing to unpack .../libexpat1_2.7.1-1_amd64.deb ...
Unpacking libexpat1:amd64 (2.7.1-1) ...
Selecting previously unselected package python3.13-minimal.
Preparing to unpack .../python3.13-minimal_3.13.2-3_amd64.deb ...
Unpacking python3.13-minimal (3.13.2-3) ...
Setting up libpython3.13-minimal:amd64 (3.13.2-3) ...
Setting up libexpat1:amd64 (2.7.1-1) ...
Setting up python3.13-minimal (3.13.2-3) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13211 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.13.2-2_amd64.deb ...
Unpacking python3-minimal (3.13.2-2) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_13.0.0_all.deb ...
Unpacking media-types (13.0.0) ...
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Preparing to unpack .../2-netbase_6.5_all.deb ...
Unpacking netbase (6.5) ...
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Preparing to unpack .../3-libffi8_3.4.7-1_amd64.deb ...
Unpacking libffi8:amd64 (3.4.7-1) ...
Selecting previously unselected package libncursesw6:amd64.
Preparing to unpack .../4-libncursesw6_6.5+20250216-2_amd64.deb ...
Unpacking libncursesw6:amd64 (6.5+20250216-2) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../5-readline-common_8.2-6_all.deb ...
Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:amd64.
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-6) ...
Selecting previously unselected package libpython3.13-stdlib:amd64.
Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-3_amd64.deb ...
Unpacking libpython3.13-stdlib:amd64 (3.13.2-3) ...
Selecting previously unselected package python3.13.
Preparing to unpack .../8-python3.13_3.13.2-3_amd64.deb ...
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/var/lib/dpkg/info/libglib2.0-0t64:riscv64.postinst: 37: /usr/lib/riscv64-linux-gnu/glib-2.0/glib-compile-schemas: Exec format error
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Setting up libcups2t64:riscv64 (2.4.10-2+b1) ...
Setting up libgudev-1.0-0:riscv64 (238-6) ...
Setting up libglx-mesa0:riscv64 (25.0.3-1) ...
Setting up libglx0:riscv64 (1.7.0-1+b2) ...
Setting up libwacom9:riscv64 (2.14.0-1) ...
Setting up libqt5core5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libgl1:riscv64 (1.7.0-1+b2) ...
Setting up libqt5sql5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libglx-dev:riscv64 (1.7.0-1+b2) ...
Setting up libgl-dev:riscv64 (1.7.0-1+b2) ...
Setting up libinput10:riscv64 (1.28.1-1) ...
Setting up libqt5dbus5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libegl-dev:riscv64 (1.7.0-1+b2) ...
Setting up libqt5concurrent5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libqt5network5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libqt5xml5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libqt5test5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libqt5gui5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libglu1-mesa-dev:riscv64 (9.0.2-1.1+b3) ...
Setting up libqt5widgets5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up libqt5printsupport5t64:riscv64 (5.15.15+dfsg-5) ...
Setting up qtbase5-dev:riscv64 (5.15.15+dfsg-5) ...
Setting up sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ...
Processing triggers for libc-bin (2.41-6) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (riscv64 included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64)
Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-6 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-riscv64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-riscv64-cross_14.2.0-19cross1 linux-libc-dev_6.12.21-1
Package versions: apt_3.0.0 apt-utils_3.0.0 autoconf_2.72-3 automake_1:1.17-4 autopoint_0.23.1-1 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-1.1+b2 binutils_2.44-3 binutils-common_2.44-3 binutils-riscv64-linux-gnu_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-3 bsdutils_1:2.41-3 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.6-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-riscv64-linux-gnu_14.2.0-19cross1 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-riscv64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-riscv64_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-3 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b1 fakeroot_1.37.1.1-1 file_1:5.46-4 findutils_4.10.0-3 fontconfig_2.15.0-2.2 fontconfig-config_2.15.0-2.2 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-riscv64-linux-gnu_14.2.0-19cross1 g++-14-x86-64-linux-gnu_14.2.0-19 g++-riscv64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-riscv64-linux-gnu_14.2.0-19cross1 gcc-14-riscv64-linux-gnu-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-riscv64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.0.0 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-riscv64-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-riscv64-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libavahi-client3_0.8-16 libavahi-common-data_0.8-16 libavahi-common3_0.8-16 libbinutils_2.44-3 libblkid1_2.41-3 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-6 libc-dev-bin_2.41-6 libc6_2.41-6 libc6-dev_2.41-6 libc6-dev-riscv64-cross_2.41-6cross2 libc6-riscv64-cross_2.41-6cross2 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-4 libcc1-0_14.2.0-19 libclang1-19_1:19.1.7-3 libcom-err2_1.47.2-1+b1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcups2t64_2.4.10-2+b1 libdb5.3t64_5.3.28+dfsg2-9 libdbus-1-3_1.16.2-2 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdouble-conversion3_3.3.1-1 libdpkg-perl_1.22.18 libdrm-amdgpu1_2.4.124-2 libdrm-common_2.4.124-2 libdrm-intel1_2.4.124-2 libdrm2_2.4.124-2 libedit2_3.1-20250104-1 libegl-dev_1.7.0-1+b2 libegl-mesa0_25.0.3-1 libegl1_1.7.0-1+b2 libelf1t64_0.192-4 libevdev2_1.13.4+dfsg-1 libexpat1_2.7.1-1 libfakeroot_1.37.1.1-1 libffi8_3.4.7-1 libfile-stripnondeterminism-perl_1.14.1-2 libfontconfig1_2.15.0-2.2 libfreetype6_2.13.3+dfsg-1 libgbm1_25.0.3-1 libgcc-14-dev_14.2.0-19 libgcc-14-dev-riscv64-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-riscv64-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgl-dev_1.7.0-1+b2 libgl1_1.7.0-1+b2 libgl1-mesa-dri_25.0.3-1 libglib2.0-0t64_2.84.1-1 libglu1-mesa_9.0.2-1.1+b3 libglu1-mesa-dev_9.0.2-1.1+b3 libglvnd0_1.7.0-1+b2 libglx-dev_1.7.0-1+b2 libglx-mesa0_25.0.3-1 libglx0_1.7.0-1+b2 libgmp10_2:6.3.0+dfsg-3 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-19 libgomp1-riscv64-cross_14.2.0-19cross1 libgprofng0_2.44-3 libgraphite2-3_1.3.14-2+b1 libgssapi-krb5-2_1.21.3-5 libgudev-1.0-0_238-6 libharfbuzz0b_10.2.0-1+b1 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-19 libice6_2:1.1.1-1 libicu76_76.1-3 libidn2-0_2.3.8-2 libinput-bin_1.28.1-1 libinput10_1.28.1-1 libisl23_0.27-1 libitm1_14.2.0-19 libitm1-riscv64-cross_14.2.0-19cross1 libjansson4_2.14-2+b3 libjpeg62-turbo_1:2.1.5-3.1 libk5crypto3_1.21.3-5 libkeyutils1_1.6.3-5 libkrb5-3_1.21.3-5 libkrb5support0_1.21.3-5 liblastlog2-2_2.41-3 libllvm19_1:19.1.7-3 liblsan0_14.2.0-19 liblsan0-riscv64-cross_14.2.0-19cross1 liblz4-1_1.10.0-4 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-4 libmagic1t64_1:5.46-4 libmd0_1.1.0-2+b1 libmd4c0_0.5.2-2+b1 libmount1_2.41-3 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libmtdev1t64_1.1.7-1 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.1-1 libopengl-dev_1.7.0-1+b2 libopengl0_1.7.0-1+b2 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpciaccess0_0.17-3+b3 libpcre2-16-0_10.45-1 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-2 libpipeline1_1.5.8-1 libpng16-16t64_1.6.47-1.1 libpython3-stdlib_3.13.2-2 libpython3.13-minimal_3.13.2-3 libpython3.13-stdlib_3.13.2-3 libqt5concurrent5t64_5.15.15+dfsg-5 libqt5core5t64_5.15.15+dfsg-5 libqt5dbus5t64_5.15.15+dfsg-5 libqt5designer5_5.15.15-6 libqt5designercomponents5_5.15.15-6 libqt5gui5t64_5.15.15+dfsg-5 libqt5help5_5.15.15-6 libqt5network5t64_5.15.15+dfsg-5 libqt5printsupport5t64_5.15.15+dfsg-5 libqt5qml5_5.15.15+dfsg-3 libqt5qmlmodels5_5.15.15+dfsg-3 libqt5quick5_5.15.15+dfsg-3 libqt5quickwidgets5_5.15.15+dfsg-3 libqt5sql5-sqlite_5.15.15+dfsg-5 libqt5sql5t64_5.15.15+dfsg-5 libqt5test5t64_5.15.15+dfsg-5 libqt5widgets5t64_5.15.15+dfsg-5 libqt5xml5t64_5.15.15+dfsg-5 libquadmath0_14.2.0-19 libreadline8t64_8.2-6 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsensors-config_1:3.6.0-10 libsensors5_1:3.6.0-10+b1 libsepol2_3.8.1-1 libsframe1_2.44-3 libsm6_2:1.2.6-1 libsmartcols1_2.41-3 libsqlite3-0_3.46.1-2 libssl3t64_3.4.1-1 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-riscv64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-riscv64-cross_14.2.0-19cross1 libsystemd0_257.4-9 libtasn1-6_4.20.0-2 libtinfo6_6.5+20250216-2 libtool_2.5.4-4 libtsan2_14.2.0-19 libtsan2-riscv64-cross_14.2.0-19cross1 libubsan1_14.2.0-19 libubsan1-riscv64-cross_14.2.0-19cross1 libuchardet0_0.0.8-1+b2 libudev1_257.4-9 libunistring5_1.3-2 libuuid1_2.41-3 libvulkan-dev_1.4.309.0-1 libvulkan1_1.4.309.0-1 libwacom-common_2.14.0-1 libwacom9_2.14.0-1 libwayland-client0_1.23.1-3 libwayland-server0_1.23.1-3 libx11-6_2:1.8.12-1 libx11-data_2:1.8.12-1 libx11-dev_2:1.8.12-1 libx11-xcb1_2:1.8.12-1 libxau-dev_1:1.0.11-1 libxau6_1:1.0.11-1 libxcb-dri3-0_1.17.0-2+b1 libxcb-glx0_1.17.0-2+b1 libxcb-icccm4_0.4.2-1 libxcb-image0_0.4.0-2+b2 libxcb-keysyms1_0.4.1-1 libxcb-present0_1.17.0-2+b1 libxcb-randr0_1.17.0-2+b1 libxcb-render-util0_0.3.10-1 libxcb-render0_1.17.0-2+b1 libxcb-shape0_1.17.0-2+b1 libxcb-shm0_1.17.0-2+b1 libxcb-sync1_1.17.0-2+b1 libxcb-util1_0.4.1-1 libxcb-xfixes0_1.17.0-2+b1 libxcb-xinerama0_1.17.0-2+b1 libxcb-xinput0_1.17.0-2+b1 libxcb-xkb1_1.17.0-2+b1 libxcb1_1.17.0-2+b1 libxcb1-dev_1.17.0-2+b1 libxdmcp-dev_1:1.1.5-1 libxdmcp6_1:1.1.5-1 libxext-dev_2:1.3.4-1+b3 libxext6_2:1.3.4-1+b3 libxkbcommon-x11-0_1.7.0-2 libxkbcommon0_1.7.0-2 libxml2_2.12.7+dfsg+really2.9.14-0.4 libxrender1_1:0.9.12-1 libxshmfence1_1.3.3-1 libxxf86vm1_1:1.1.4-1+b4 libxxhash0_0.8.3-2 libz3-4_4.13.3-1 libzstd1_1.5.7+dfsg-1 linux-libc-dev_6.12.21-1 linux-libc-dev-riscv64-cross_6.12.17-1cross2 login_1:4.16.0-2+really2.41-3 login.defs_1:4.17.4-1 m4_1.4.19-7 make_4.4.1-1 man-db_2.13.0-1 mawk_1.3.4.20250131-1 media-types_13.0.0 mesa-libgallium_25.0.3-1 mount_2.41-3 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 netbase_6.5 openssl-provider-legacy_3.4.1-1 passwd_1:4.17.4-1 patch_2.7.6-7 perl_5.40.1-2 perl-base_5.40.1-2 perl-modules-5.40_5.40.1-2 po-debconf_1.0.21+nmu1 python3_3.13.2-2 python3-minimal_3.13.2-2 python3.13_3.13.2-3 python3.13-minimal_3.13.2-3 qdoc-qt5_5.15.15-6 qhelpgenerator-qt5_5.15.15-6 qt5-assistant_5.15.15-6 qt5-qmake_5.15.15+dfsg-5 qt5-qmake-bin_5.15.15+dfsg-5 qtattributionsscanner-qt5_5.15.15-6 qtbase5-dev_5.15.15+dfsg-5 qtbase5-dev-tools_5.15.15+dfsg-5 qtchooser_66-2 qttools5-dev-tools_5.15.15-6 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 shared-mime-info_2.4-5+b2 sqv_1.3.0-1 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-1 util-linux_2.41-3 x11-common_1:7.7+24 x11proto-dev_2024.1-1 xkb-data_2.42-1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: clustalx
Binary: clustalx
Architecture: any
Version: 2.1+lgpl-9
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>, Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>
Homepage: http://www.clustal.org/clustal2/
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/clustalx
Vcs-Git: https://salsa.debian.org/med-team/clustalx.git
Build-Depends: debhelper-compat (= 13), qtbase5-dev, qtbase5-dev-tools, qttools5-dev-tools
Package-List:
 clustalx deb science optional arch=any
Checksums-Sha1:
 63196a4e113a22e5e575f223d76b7406f4f70795 341649 clustalx_2.1+lgpl.orig.tar.gz
 b7b02b1250b121b5162e6aa0e43a931c1518401e 15224 clustalx_2.1+lgpl-9.debian.tar.xz
Checksums-Sha256:
 e10adb728c320598a165ca529f1aa3d2560061de0236e0a0926eaca9554afa05 341649 clustalx_2.1+lgpl.orig.tar.gz
 a72891b756770c26939b8dc96afd800dd2156057a47caa5f4085b53d362e8011 15224 clustalx_2.1+lgpl-9.debian.tar.xz
Files:
 5b1f2f1cc8e939411ab0f934cafa072a 341649 clustalx_2.1+lgpl.orig.tar.gz
 6a04d1877358fa582cf4897c5296c45c 15224 clustalx_2.1+lgpl-9.debian.tar.xz

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dpkg-source: warning: cannot verify inline signature for ./clustalx_2.1+lgpl-9.dsc: unsupported subcommand
dpkg-source: info: extracting clustalx in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking clustalx_2.1+lgpl.orig.tar.gz
dpkg-source: info: unpacking clustalx_2.1+lgpl-9.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardcode-accessory-file-locations.patch
dpkg-source: info: applying spelling.patch
dpkg-source: info: applying qt5.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
CONFIG_SITE=/etc/dpkg-cross/cross-config.riscv64
DEB_BUILD_OPTIONS=nocheck
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=crossqa
OLDPWD=/home/crossqa
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SBUILD_CONFIG=/tmp/tmp.EjBfMjsizP/sbuild.conf
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=crossqa
SCHROOT_SESSION_ID=sid-amd64-sbuild-fd759ccc-26b7-4a96-b824-0f7989cd3ce0
SCHROOT_UID=1000
SCHROOT_USER=crossqa
SHELL=/bin/sh
USER=crossqa
XDG_SESSION_CLASS=user

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -ariscv64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1
dpkg-buildpackage: info: source package clustalx
dpkg-buildpackage: info: source version 2.1+lgpl-9
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-architecture: warning: specified GNU system type riscv64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture riscv64
 debian/rules clean
dh clean
   dh_auto_clean
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f moc_*
dh_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules binary-arch
dh binary-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure
	riscv64-linux-gnu-qmake -makefile -spec linux-g\+\+ "QMAKE_CFLAGS_RELEASE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CFLAGS_DEBUG=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CXXFLAGS_RELEASE=-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_CXXFLAGS_DEBUG=-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "QMAKE_LFLAGS_RELEASE=-Wl,-z,relro -Wl,-z,now" "QMAKE_LFLAGS_DEBUG=-Wl,-z,relro -Wl,-z,now" QMAKE_STRIP=: PREFIX=/usr
Info: creating stash file /<<PKGBUILDDIR>>/.qmake.stash
# did not found a better way to push hardening flags into Makefile
sed -i -e "s:CFLAGS *= .*:& -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security:" \
       -e "s:CXXFLAGS *= .*:& -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security:" \
       -e "s:LFLAGS *= .*:& -Wl,-z,relro -Wl,-z,now:" Makefile
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_build -a
	make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentFormatOptions.o AlignmentFormatOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentParameters.o AlignmentParameters.cpp
In file included from clustalW/substitutionMatrix/globalmatrix.h:8,
                 from AlignmentParameters.cpp:22:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
AlignmentParameters.cpp: In member function ‘virtual void AlignmentParameters::showEvent(QShowEvent*)’:
AlignmentParameters.cpp:48:49: warning: unused parameter ‘event’ [-Wunused-parameter]
   48 | void AlignmentParameters::showEvent(QShowEvent* event)
      |                                     ~~~~~~~~~~~~^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentViewerWidget.o AlignmentViewerWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentViewerWidget.h:36,
                 from AlignmentViewerWidget.cpp:66:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from AlignmentViewerWidget.cpp:68:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qabstractanimation.h:43,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/QtCore:6,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgets:3,
                 from AlignmentViewerWidget.cpp:63:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
AlignmentViewerWidget.cpp: In member function ‘int AlignmentViewerWidget::makeGapPenaltyData()’:
AlignmentViewerWidget.cpp:588:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  588 |             for(i = 0; i < len && i < gapMask->size(); i++)
      |                                   ~~^~~~~~~~~~~~~~~~~
AlignmentViewerWidget.cpp: In member function ‘int AlignmentViewerWidget::makeSecStructData()’:
AlignmentViewerWidget.cpp:645:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  645 |             for (i = 0; i < len && i < _secStructMask->size();i++)
      |                                    ~~^~~~~~~~~~~~~~~~~~~~~~~~
AlignmentViewerWidget.cpp:652:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  652 |             for(i = 0; i < len && i < ssMask.size(); i++)
      |                                   ~~^~~~~~~~~~~~~~~
AlignmentViewerWidget.cpp: In member function ‘virtual void AlignmentViewerWidget::resizeEvent(QResizeEvent*)’:
AlignmentViewerWidget.cpp:781:58: warning: unused parameter ‘event’ [-Wunused-parameter]
  781 | void AlignmentViewerWidget::resizeEvent ( QResizeEvent * event )
      |                                           ~~~~~~~~~~~~~~~^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentWidget.o AlignmentWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentWidget.h:41,
                 from AlignmentWidget.cpp:49:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
AlignmentWidget.h: In constructor ‘AlignmentWidget::AlignmentWidget(int, int, QFont*, QWidget*)’:
AlignmentWidget.h:170:10: warning: ‘AlignmentWidget::blackAndWhite’ will be initialized after [-Wreorder]
  170 |     bool blackAndWhite;
      |          ^~~~~~~~~~~~~
AlignmentWidget.h:161:27: warning:   ‘std::vector<QPixmap, std::allocator<QPixmap> >* AlignmentWidget::selectedColoredRes’ [-Wreorder]
  161 |     std::vector<QPixmap>* selectedColoredRes;
      |                           ^~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:65:1: warning:   when initialized here [-Wreorder]
   65 | AlignmentWidget::AlignmentWidget(int boxwidth, int boxsize, QFont* font, QWidget *parent)
      | ^~~~~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::calculatePixMaps()’:
AlignmentWidget.cpp:225:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  225 |         for(unsigned int j = 0; j < lengthLongestSeq; j++)
      |                                 ~~^~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:235:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPixmap, std::allocator<QPixmap> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  235 |                 if(code >= 0 && code < conservationPixmaps->size())
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:268:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPixmap, std::allocator<QPixmap> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  268 |                     if(codeForAA >=0 && codeForAA < lowScoreColoredRes->size())
      |                                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:280:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPixmap, std::allocator<QPixmap> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  280 |                     if(codeForAA >=0 && codeForAA < exceptionalColoredRes->size())
      |                                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:291:86: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  291 |                     if(colMask.getRowSize() > (i - extraRow) && colMask.getColSize() > j)
      |                                                                 ~~~~~~~~~~~~~~~~~~~~~^~~
AlignmentWidget.cpp:215:9: warning: unused variable ‘codeForSpace’ [-Wunused-variable]
  215 |     int codeForSpace = clustalw::userParameters->resIndex(
      |         ^~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::generateSecStructurePixmaps()’:
AlignmentWidget.cpp:333:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPixmap, std::allocator<QPixmap> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  333 |         if(i < secStructPixmaps->size() && i < secStructInfo.size())
      |            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:344:34: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
  344 |                 fontMetrics.width(secStructInfo[i])/2,
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /usr/include/riscv64-linux-gnu/qt5/QtGui/QtGui:26,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgets:3,
                 from AlignmentWidget.cpp:48:
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::drawContents(QPainter*, int, int, int, int)’:
AlignmentWidget.cpp:569:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<QPixmap, std::allocator<QPixmap> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  569 |                     if(selectedRes >= selectedColoredRes->size())
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::calcConserveInfo()’:
AlignmentWidget.cpp:689:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  689 |             for(int j = 1; j <= strongGroup.size(); j++)
      |                            ~~^~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:693:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  693 |             for(int j = 1; j <= weakGroup.size(); j++)
      |                            ~~^~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:700:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  700 |                 if((i + _fRes - 1 < (*alignment)[j].size()) &&
      |                     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:701:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  701 |                    (i + _fRes - 1 < (*alignment)[_fSeq].size()))
      |                     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:725:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  725 |                         for(int k = 1; k <= strongGroup.size(); k++)
      |                                        ~~^~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:737:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  737 |                         for(int k = 1; k <= weakGroup.size(); k++)
      |                                        ~~^~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:760:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  760 |                 for(int k = 1; k <= strongGroup.size(); k++)
      |                                ~~^~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:771:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  771 |                     for(int k = 1; k <= weakGroup.size(); k++)
      |                                    ~~^~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::makeColorMask(clustalw::Array2D<int>*, ColorParameters*)’:
AlignmentWidget.cpp:878:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  878 |             if(res + 1 < (*alignment)[currentSeq].size() && (lastSeq >= currentSeq))
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘QString AlignmentWidget::initConsensus()’:
AlignmentWidget.cpp:927:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  927 |                 if(res + 1 < (*alignment)[currentSeq].size() && (lastSeq >= currentSeq))
      |                    ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp: In member function ‘void AlignmentWidget::generatePixMaps()’:
AlignmentWidget.cpp:1039:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1039 |         for(int j = 0; j < aminoAcid.size(); j++)
      |                        ~~^~~~~~~~~~~~~~~~~~
AlignmentWidget.cpp:1051:49: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
 1051 |                                fontMetrics.width(currentChar)/2,
      |                                ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
AlignmentWidget.cpp:1079:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
 1079 |                            fontMetrics.width(currentChar)/2,
      |                            ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
AlignmentWidget.cpp:1089:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
 1089 |                            fontMetrics.width(currentChar)/2,
      |                            ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
AlignmentWidget.cpp:1099:45: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
 1099 |                            fontMetrics.width(currentChar)/2,
      |                            ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
AlignmentWidget.cpp:1118:30: warning: ‘int QFontMetrics::width(QChar) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
 1118 |             fontMetrics.width(currentChar)/2,
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:110:9: note: declared here
  110 |     int width(QChar) const;
      |         ^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignOutputFileNames.o AlignOutputFileNames.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from AlignOutputFileNames.h:10,
                 from AlignOutputFileNames.cpp:26:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
AlignOutputFileNames.h:106:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  106 |     auto_ptr<clustalw::AlignmentFileNames> outFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:65,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qpixmap.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qicon.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qpushbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QPushButton:1,
                 from AlignOutputFileNames.cpp:16:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o BootstrapTreeDialog.o BootstrapTreeDialog.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from BootstrapTreeDialog.h:11,
                 from BootstrapTreeDialog.cpp:18:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
BootstrapTreeDialog.h:70:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:65,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qpixmap.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qicon.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qpushbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QPushButton:1,
                 from BootstrapTreeDialog.cpp:8:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ColorFileXmlParser.o ColorFileXmlParser.cpp
ColorFileXmlParser.cpp:74:13: warning: multi-line comment [-Wcomment]
   74 |             //                     tr("colorrules not found in the parameter file, using\
      |             ^
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from ColorParameters.h:11,
                 from ColorFileXmlParser.h:9,
                 from ColorFileXmlParser.cpp:3:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
ColorFileXmlParser.cpp: In member function ‘int ColorFileXmlParser::parseRGBIndex(const QDomElement&, QTreeWidgetItem*)’:
ColorFileXmlParser.cpp:85:46: warning: unused parameter ‘parentItem’ [-Wunused-parameter]
   85 |                             QTreeWidgetItem *parentItem)
      |                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
ColorFileXmlParser.cpp: In member function ‘void ColorFileXmlParser::parseConsensus(const QDomElement&, QTreeWidgetItem*)’:
ColorFileXmlParser.cpp:138:86: warning: unused parameter ‘parentItem’ [-Wunused-parameter]
  138 | void ColorFileXmlParser::parseConsensus(const QDomElement &element, QTreeWidgetItem *parentItem)
      |                                                                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~
ColorFileXmlParser.cpp: In member function ‘int ColorFileXmlParser::parseColorRule(const QDomElement&, QTreeWidgetItem*)’:
ColorFileXmlParser.cpp:175:85: warning: unused parameter ‘parentItem’ [-Wunused-parameter]
  175 | int ColorFileXmlParser::parseColorRule(const QDomElement &element, QTreeWidgetItem *parentItem)
      |                                                                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ColorParameters.o ColorParameters.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from ColorParameters.h:11,
                 from ColorParameters.cpp:1:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
ColorParameters.cpp: In member function ‘QColor ColorParameters::getResidueColor(QChar, QChar)’:
ColorParameters.cpp:160:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<residueColors>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  160 |     for(i = 0; i < colorPar.size(); i++)
      |                ~~^~~~~~~~~~~~~~~~~
ColorParameters.cpp:174:26: warning: unused variable ‘temp’ [-Wunused-variable]
  174 |                     char temp = colorPar[i].consensusConditionList[j].toLatin1();
      |                          ^~~~
ColorParameters.cpp:157:10: warning: unused variable ‘showRes’ [-Wunused-variable]
  157 |     char showRes = res.toLatin1();
      |          ^~~~~~~
ColorParameters.cpp:158:10: warning: unused variable ‘showCon’ [-Wunused-variable]
  158 |     char showCon = consensus.toLatin1();
      |          ^~~~~~~
ColorParameters.cpp: In member function ‘int ColorParameters::getResidueColorNum(QChar, QChar)’:
ColorParameters.cpp:197:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<residueColors>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  197 |     for(i = 0; i < colorPar.size(); i++)
      |                ~~^~~~~~~~~~~~~~~~~
ColorParameters.cpp:211:26: warning: unused variable ‘temp’ [-Wunused-variable]
  211 |                     char temp = colorPar[i].consensusConditionList[j].toLatin1();
      |                          ^~~~
ColorParameters.cpp:194:10: warning: unused variable ‘showRes’ [-Wunused-variable]
  194 |     char showRes = res.toLatin1();
      |          ^~~~~~~
ColorParameters.cpp:195:10: warning: unused variable ‘showCon’ [-Wunused-variable]
  195 |     char showCon = consensus.toLatin1();
      |          ^~~~~~~
ColorParameters.cpp: In member function ‘void ColorParameters::printColorInfo()’:
ColorParameters.cpp:229:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::pair<QString, QColor> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  229 |     for(int i = 0; i < colors.size(); i++)
      |                    ~~^~~~~~~~~~~~~~~
ColorParameters.cpp: In member function ‘int ColorParameters::getIndexOfColor(QColor)’:
ColorParameters.cpp:238:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::pair<QString, QColor> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  238 |     for(int i = 0; i < colors.size(); i++)
      |                    ~~^~~~~~~~~~~~~~~
ColorParameters.cpp: In member function ‘QColor ColorParameters::getColorFromNum(int)’:
ColorParameters.cpp:251:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<residueColors>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  251 |     if(colorNum > 0 && colorNum - 1 < colorPar.size())
      |                        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ColumnScoreParams.o ColumnScoreParams.cpp
In file included from clustalW/substitutionMatrix/globalmatrix.h:8,
                 from ColumnScoreParams.cpp:23:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
ColumnScoreParams.cpp: In member function ‘virtual void ColumnScoreParams::showEvent(QShowEvent*)’:
ColumnScoreParams.cpp:51:47: warning: unused parameter ‘event’ [-Wunused-parameter]
   51 | void ColumnScoreParams::showEvent(QShowEvent* event)
      |                                   ~~~~~~~~~~~~^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o FileDialog.o FileDialog.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o HardCodedColorScheme.o HardCodedColorScheme.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from HardCodedColorScheme.cpp:1:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o HelpDisplayWidget.o HelpDisplayWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HelpDisplayWidget.h:18,
                 from HelpDisplayWidget.cpp:15:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
HelpDisplayWidget.cpp: In member function ‘std::string* HelpDisplayWidget::loadHelpInformation(char)’:
HelpDisplayWidget.cpp:147:29: warning: catching polymorphic type ‘class std::ios_base::failure’ by value [-Wcatch-value=]
  147 |     catch(ifstream::failure e)
      |                             ^
HelpDisplayWidget.cpp:61:13: warning: variable ‘number’ set but not used [-Wunused-but-set-variable]
   61 |     int  i, number, nlines;
      |             ^~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o HistogramWidget.o HistogramWidget.cpp
HistogramWidget.cpp: In member function ‘void HistogramWidget::drawContents(QPainter*, int, int, int, int)’:
HistogramWidget.cpp:180:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  180 |             if(column >= 0 && column < arrayOfHeights->size())
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
HistogramWidget.cpp:198:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  198 |             if(column >= 0 && column < arrayOfHeights->size())
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
HistogramWidget.cpp:208:47: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
  208 |                             (fontMetrics.width(QString::number(rulerNum))) / 2;
      |                              ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qwidget.h:50,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qframe.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qlabel.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QLabel:1,
                 from HistogramWidget.h:29,
                 from HistogramWidget.cpp:23:
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here
  106 |     int width(const QString &, int len = -1) const;
      |         ^~~~~
HistogramWidget.cpp:241:61: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
  241 |                                           (fontMetrics.width(QString::number(0))) / 2, yPos, boxWidth,
      |                                            ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here
  106 |     int width(const QString &, int len = -1) const;
      |         ^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o KeyController.o KeyController.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o LowScoringSegParams.o LowScoringSegParams.cpp
In file included from clustalW/substitutionMatrix/globalmatrix.h:8,
                 from LowScoringSegParams.cpp:22:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
LowScoringSegParams.cpp: In member function ‘virtual void LowScoringSegParams::showEvent(QShowEvent*)’:
LowScoringSegParams.cpp:51:49: warning: unused parameter ‘event’ [-Wunused-parameter]
   51 | void LowScoringSegParams::showEvent(QShowEvent* event)
      |                                     ~~~~~~~~~~~~^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o main.o main.cpp
In file included from main.cpp:21:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/Clustal.h:18,
                 from mainwindow.h:45,
                 from main.cpp:24:
clustalW/fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qcoreapplication.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qapplication.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QApplication:1,
                 from main.cpp:19:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/Clustal.h:20:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o mainwindow.o mainwindow.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentViewerWidget.h:36,
                 from mainwindow.h:37,
                 from mainwindow.cpp:98:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/Clustal.h:18,
                 from mainwindow.h:45:
clustalW/fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qabstractanimation.h:43,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/QtCore:6,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgets:3,
                 from mainwindow.cpp:90:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/Clustal.h:20:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from mainwindow.cpp:99:
WritePostscriptFile.h:88:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   88 |     auto_ptr<PostscriptFileParams> params;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from mainwindow.cpp:100:
AlignOutputFileNames.h:106:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  106 |     auto_ptr<clustalw::AlignmentFileNames> outFileNames;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from mainwindow.cpp:101:
TreeOutputFileNames.h:73:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   73 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from mainwindow.cpp:102:
BootstrapTreeDialog.h:70:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
mainwindow.cpp: In member function ‘virtual void MainWindow::showEvent(QShowEvent*)’:
mainwindow.cpp:198:40: warning: unused parameter ‘event’ [-Wunused-parameter]
  198 | void MainWindow::showEvent(QShowEvent* event)
      |                            ~~~~~~~~~~~~^~~~~
mainwindow.cpp: In member function ‘void MainWindow::writeViewer1AsPostscript(int)’:
mainwindow.cpp:1454:47: warning: unused parameter ‘type’ [-Wunused-parameter]
 1454 | void MainWindow::writeViewer1AsPostscript(int type)
      |                                           ~~~~^~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o PairwiseParams.o PairwiseParams.cpp
In file included from clustalW/substitutionMatrix/globalmatrix.h:8,
                 from PairwiseParams.cpp:23:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
PairwiseParams.cpp: In member function ‘virtual void PairwiseParams::showEvent(QShowEvent*)’:
PairwiseParams.cpp:74:44: warning: unused parameter ‘event’ [-Wunused-parameter]
   74 | void PairwiseParams::showEvent(QShowEvent* event)
      |                                ~~~~~~~~~~~~^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o PostscriptFileParams.o PostscriptFileParams.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from PostscriptFileParams.h:4,
                 from PostscriptFileParams.cpp:1:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ProteinGapParameters.o ProteinGapParameters.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o PSPrinter.o PSPrinter.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from ColorParameters.h:11,
                 from PSPrinter.h:11,
                 from PSPrinter.cpp:20:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
PSPrinter.cpp: In member function ‘void PSPrinter::writePSFile(PostscriptFileParams*)’:
PSPrinter.cpp:207:55: warning: comparison of integer expressions of different signedness: ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  207 |                 if(res.isLetter() && resNumber.size() > i - data->firstSeq)
      |                                      ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
PSPrinter.cpp:307:67: warning: comparison of integer expressions of different signedness: ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  307 |                             if(res.isLetter() && resNumber.size() > seq)
      |                                                  ~~~~~~~~~~~~~~~~~^~~~~
PSPrinter.cpp:421:67: warning: comparison of integer expressions of different signedness: ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  421 |                             if(res.isLetter() && resNumber.size() > i)
      |                                                  ~~~~~~~~~~~~~~~~~^~~
PSPrinter.cpp:55:9: warning: unused variable ‘err’ [-Wunused-variable]
   55 |     int err;
      |         ^~~
PSPrinter.cpp:73:9: warning: unused variable ‘gapPos1’ [-Wunused-variable]
   73 |     int gapPos1 = clustalw::userParameters->getGapPos1(); // Mark: 22-1-2007 new local
      |         ^~~~~~~
PSPrinter.cpp:74:9: warning: unused variable ‘gapPos2’ [-Wunused-variable]
   74 |     int gapPos2 = clustalw::userParameters->getGapPos2(); // Mark: 22-1-2007 new local
      |         ^~~~~~~
PSPrinter.cpp: In member function ‘void PSPrinter::printHeaderLine(std::ofstream*, int, int, int)’:
PSPrinter.cpp:587:32: warning: comparison of integer expressions of different signedness: ‘std::vector<QString>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  587 |     if(data->nameHeader.size() > ix)
      |        ~~~~~~~~~~~~~~~~~~~~~~~~^~~~
PSPrinter.cpp: In member function ‘void PSPrinter::printFooterLine(std::ofstream*, int, int)’:
PSPrinter.cpp:730:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  730 |     for(i = fr; i <= lr && i < ruler.length(); i++)
      |                            ~~^~~~~~~~~~~~~~~~
PSPrinter.cpp: In member function ‘void PSPrinter::printQualityCurve(std::ofstream*, int, int, int)’:
PSPrinter.cpp:789:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int, std::allocator<int> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  789 |     for(i = fr + 1; i <= lr && i < data->histogram->size(); i++)
      |                                ~~^~~~~~~~~~~~~~~~~~~~~~~~~
PSPrinter.cpp:781:14: warning: unused variable ‘psY’ [-Wunused-variable]
  781 |     int psX, psY, curveBottom;
      |              ^~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o QTUtility.o QTUtility.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Resources.o Resources.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SaveSeqFile.o SaveSeqFile.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from SaveSeqFile.h:9,
                 from SaveSeqFile.cpp:23:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from SaveSeqFile.cpp:26:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:65,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qpixmap.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qicon.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qpushbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QPushButton:1,
                 from SaveSeqFile.cpp:14:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SearchForString.o SearchForString.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SecStructOptions.o SecStructOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SeqNameWidget.o SeqNameWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from SeqNameWidget.h:41,
                 from SeqNameWidget.cpp:59:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
SeqNameWidget.cpp: In member function ‘virtual void SeqNameWidget::paintEvent(QPaintEvent*)’:
SeqNameWidget.cpp:375:11: warning: variable ‘redrawRect’ set but not used [-Wunused-but-set-variable]
  375 |     QRect redrawRect = event->rect();
      |           ^~~~~~~~~~
SeqNameWidget.cpp: In member function ‘int SeqNameWidget::setMaxNameLength()’:
SeqNameWidget.cpp:443:43: warning: ‘int QFontMetrics::width(const QString&, int) const’ is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations]
  443 |             int length = fontMetrics.width(QString(name.c_str()));
      |                          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/riscv64-linux-gnu/qt5/QtGui/QtGui:26,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QtWidgets:3,
                 from SeqNameWidget.cpp:58:
/usr/include/riscv64-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here
  106 |     int width(const QString &, int len = -1) const;
      |         ^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o TreeFormatOptions.o TreeFormatOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o TreeOutputFileNames.o TreeOutputFileNames.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from TreeOutputFileNames.h:10,
                 from TreeOutputFileNames.cpp:17:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
TreeOutputFileNames.h:73:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   73 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:65,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qpixmap.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qicon.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qpushbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QPushButton:1,
                 from TreeOutputFileNames.cpp:7:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o WritePostscriptFile.o WritePostscriptFile.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from WritePostscriptFile.h:10,
                 from WritePostscriptFile.cpp:24:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
WritePostscriptFile.h:88:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   88 |     auto_ptr<PostscriptFileParams> params;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qvarlengtharray.h:52,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qmetatype.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qobject.h:54,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer_impl.h:65,
                 from /usr/include/riscv64-linux-gnu/qt5/QtCore/qsharedpointer.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qpixmap.h:48,
                 from /usr/include/riscv64-linux-gnu/qt5/QtGui/qicon.h:46,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qabstractbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/qpushbutton.h:44,
                 from /usr/include/riscv64-linux-gnu/qt5/QtWidgets/QPushButton:1,
                 from WritePostscriptFile.cpp:14:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from WritePostscriptFile.cpp:27:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Clustal.o clustalW/Clustal.cpp
In file included from clustalW/fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/fileInput/../alignment/Alignment.h:42,
                 from clustalW/fileInput/FileReader.h:12,
                 from clustalW/Clustal.h:18,
                 from clustalW/Clustal.cpp:27:
clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/fileInput/FileReader.h:11:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/Clustal.h:20:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/Clustal.cpp:33:
clustalW/tree/TreeInterface.h:38:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   38 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMat(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:57:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   57 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTree(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:102:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  102 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatNJ(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:108:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  108 |         auto_ptr<AlignmentSteps> getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:133:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  133 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTreeNJ(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:138:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  138 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatUPGMA(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:142:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  142 |         auto_ptr<AlignmentSteps> generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/Clustal.cpp: In member function ‘void clustalw::Clustal::align(std::string*, bool)’:
clustalW/Clustal.cpp:162:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  162 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/Clustal.cpp: In member function ‘void clustalw::Clustal::doAlignUseOldTree(std::string*)’:
clustalW/Clustal.cpp:837:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  837 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Help.o clustalW/Help.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Alignment.o clustalW/alignment/Alignment.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from clustalW/alignment/Alignment.cpp:25:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetProfile1()’:
clustalW/alignment/Alignment.cpp:47:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   47 |     register int sl;                /* which have  code = gap_pos2  */
      |                  ^~
clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetProfile2()’:
clustalW/alignment/Alignment.cpp:122:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  122 |     register int sl;                /* which have  code = gap_pos2  */
      |                  ^~
clustalW/alignment/Alignment.cpp: In member function ‘void clustalw::Alignment::resetAlign()’:
clustalW/alignment/Alignment.cpp:617:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  617 |     register int sl;
      |                  ^~
clustalW/alignment/Alignment.cpp: In member function ‘bool clustalw::Alignment::keepPortionOfSeqArray(int, int)’:
clustalW/alignment/Alignment.cpp:1715:24: warning: variable ‘posToAddTo’ set but not used [-Wunused-but-set-variable]
 1715 |     SeqArray::iterator posToAddTo = sectionToRealign.begin();
      |                        ^~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentOutput.o clustalW/alignment/AlignmentOutput.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from clustalW/alignment/AlignmentOutput.h:24,
                 from clustalW/alignment/AlignmentOutput.cpp:27:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/alignment/AlignmentOutput.h:20:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.cpp:512:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  512 | bool AlignmentOutput::openExplicitFile(auto_ptr<ofstream>& outFile, string fileName)
      |                                        ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.cpp:535:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  535 | string AlignmentOutput::openOutputFile(auto_ptr<ofstream>& outFile, string prompt,
      |                                        ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::fastaOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:673:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
  673 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::gcgOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:868:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
  868 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::phylipOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:1027:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 1027 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::nexusOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:1156:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 1156 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::gdeOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:1445:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 1445 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::nbrfOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:1560:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 1560 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::clustalOut(clustalw::Alignment*, clustalw::outputRegion)’:
clustalW/alignment/AlignmentOutput.cpp:2095:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 2095 |     catch(VectorOutOfRange e)
      |                            ^
clustalW/alignment/AlignmentOutput.cpp:2102:21: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=]
 2102 |     catch(exception e)
      |                     ^
clustalW/alignment/AlignmentOutput.cpp: In member function ‘void clustalw::AlignmentOutput::findRangeValues(clustalw::Alignment*, clustalw::rangeNum*, int, int, int)’:
clustalW/alignment/AlignmentOutput.cpp:2351:28: warning: catching polymorphic type ‘class clustalw::VectorOutOfRange’ by value [-Wcatch-value=]
 2351 |     catch(VectorOutOfRange e)
      |                            ^
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ObjectiveScore.o clustalW/alignment/ObjectiveScore.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/ObjectiveScore.h:15,
                 from clustalW/alignment/ObjectiveScore.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Sequence.o clustalW/alignment/Sequence.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ClustalFileParser.o clustalW/fileInput/ClustalFileParser.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o EMBLFileParser.o clustalW/fileInput/EMBLFileParser.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o FileParser.o clustalW/fileInput/FileParser.cpp
clustalW/fileInput/FileParser.cpp: In member function ‘void clustalw::FileParser::fillCharTab()’:
clustalW/fileInput/FileParser.cpp:37:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   37 |     register int i;
      |                  ^
clustalW/fileInput/FileParser.cpp:38:19: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   38 |     register char c;
      |                   ^
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o FileReader.o clustalW/fileInput/FileReader.cpp
In file included from clustalW/fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/fileInput/../alignment/Alignment.h:42,
                 from clustalW/fileInput/FileReader.h:12,
                 from clustalW/fileInput/FileReader.cpp:29:
clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/fileInput/FileReader.h:11:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/fileInput/FileReader.cpp: In member function ‘int clustalw::FileReader::readSeqs(clustalw::Alignment*, int, std::string*)’:
clustalW/fileInput/FileReader.cpp:155:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  155 |     auto_ptr<FileParser> fileParser; // Means we dont need to delete it!
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/fileInput/FileReader.cpp: At global scope:
clustalW/fileInput/FileReader.cpp:426:42: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  426 | void FileReader::checkInfile(int *nseqs, auto_ptr<FileParser>& fileParser)
      |                                          ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/fileInput/FileReader.cpp: In member function ‘void clustalw::FileReader::checkInfile(int*, std::auto_ptr<clustalw::FileParser>&)’:
clustalW/fileInput/FileReader.cpp:555:21: warning: catching polymorphic type ‘class std::exception’ by value [-Wcatch-value=]
  555 |     catch(exception ex)
      |                     ^~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o GDEFileParser.o clustalW/fileInput/GDEFileParser.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o InFileStream.o clustalW/fileInput/InFileStream.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o MSFFileParser.o clustalW/fileInput/MSFFileParser.cpp
clustalW/fileInput/MSFFileParser.cpp: In member function ‘virtual std::vector<clustalw::Sequence> clustalw::MSFFileParser::getSeqRange(int, int, std::string*)’:
clustalW/fileInput/MSFFileParser.cpp:34:79: warning: unused parameter ‘offendingSeq’ [-Wunused-parameter]
   34 |     vector<Sequence> MSFFileParser::getSeqRange(int firstSeq, int no, string *offendingSeq)
      |                                                                       ~~~~~~~~^~~~~~~~~~~~
clustalW/fileInput/MSFFileParser.cpp: In member function ‘virtual void clustalw::MSFFileParser::getSecStructure(std::vector<char>&, std::vector<char>&, std::string&, int&, int)’:
clustalW/fileInput/MSFFileParser.cpp:246:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter]
  246 | void MSFFileParser::getSecStructure(vector<char>& gapPenaltyMask, vector<char>& secStructMask,
      |                                     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
clustalW/fileInput/MSFFileParser.cpp:246:81: warning: unused parameter ‘secStructMask’ [-Wunused-parameter]
  246 | void MSFFileParser::getSecStructure(vector<char>& gapPenaltyMask, vector<char>& secStructMask,
      |                                                                   ~~~~~~~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/MSFFileParser.cpp:247:45: warning: unused parameter ‘secStructName’ [-Wunused-parameter]
  247 |                                     string& secStructName, int &structPenalties, int length)
      |                                     ~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/MSFFileParser.cpp:247:86: warning: unused parameter ‘length’ [-Wunused-parameter]
  247 |                                     string& secStructName, int &structPenalties, int length)
      |                                                                                  ~~~~^~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o PearsonFileParser.o clustalW/fileInput/PearsonFileParser.cpp
clustalW/fileInput/PearsonFileParser.cpp: In member function ‘virtual clustalw::Sequence clustalw::PearsonFileParser::getSeq(int, std::string*)’:
clustalW/fileInput/PearsonFileParser.cpp:199:60: warning: unused parameter ‘offendingSeq’ [-Wunused-parameter]
  199 |     Sequence PearsonFileParser::getSeq(int seqNum, string *offendingSeq)
      |                                                    ~~~~~~~~^~~~~~~~~~~~
clustalW/fileInput/PearsonFileParser.cpp: In member function ‘virtual void clustalw::PearsonFileParser::getSecStructure(std::vector<char>&, std::vector<char>&, std::string&, int&, int)’:
clustalW/fileInput/PearsonFileParser.cpp:444:55: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter]
  444 | void PearsonFileParser::getSecStructure(vector<char>& gapPenaltyMask,
      |                                         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
clustalW/fileInput/PearsonFileParser.cpp:445:40: warning: unused parameter ‘secStructMask’ [-Wunused-parameter]
  445 |                          vector<char>& secStructMask, string& secStructName,
      |                          ~~~~~~~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/PearsonFileParser.cpp:445:63: warning: unused parameter ‘secStructName’ [-Wunused-parameter]
  445 |                          vector<char>& secStructMask, string& secStructName,
      |                                                       ~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/PearsonFileParser.cpp:446:53: warning: unused parameter ‘length’ [-Wunused-parameter]
  446 |                           int &structPenalties, int length)
      |                                                 ~~~~^~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o PIRFileParser.o clustalW/fileInput/PIRFileParser.cpp
clustalW/fileInput/PIRFileParser.cpp: In member function ‘virtual void clustalw::PIRFileParser::getSecStructure(std::vector<char>&, std::vector<char>&, std::string&, int&, int)’:
clustalW/fileInput/PIRFileParser.cpp:292:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter]
  292 | void PIRFileParser::getSecStructure(vector<char>& gapPenaltyMask, vector<char>& secStructMask,
      |                                     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
clustalW/fileInput/PIRFileParser.cpp:292:81: warning: unused parameter ‘secStructMask’ [-Wunused-parameter]
  292 | void PIRFileParser::getSecStructure(vector<char>& gapPenaltyMask, vector<char>& secStructMask,
      |                                                                   ~~~~~~~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/PIRFileParser.cpp:293:45: warning: unused parameter ‘secStructName’ [-Wunused-parameter]
  293 |                                     string& secStructName, int &structPenalties, int length)
      |                                     ~~~~~~~~^~~~~~~~~~~~~
clustalW/fileInput/PIRFileParser.cpp:293:86: warning: unused parameter ‘length’ [-Wunused-parameter]
  293 |                                     string& secStructName, int &structPenalties, int length)
      |                                                                                  ~~~~^~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o RSFFileParser.o clustalW/fileInput/RSFFileParser.cpp
clustalW/fileInput/RSFFileParser.cpp: In member function ‘virtual void clustalw::RSFFileParser::getSecStructure(std::vector<char>&, std::vector<char>&, std::string&, int&, int)’:
clustalW/fileInput/RSFFileParser.cpp:240:51: warning: unused parameter ‘gapPenaltyMask’ [-Wunused-parameter]
  240 | void RSFFileParser::getSecStructure(vector<char>& gapPenaltyMask, vector<char>& secStructMask,
      |                                     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ClustalWResources.o clustalW/general/ClustalWResources.cpp
clustalW/general/ClustalWResources.cpp: In member function ‘std::string clustalw::ClustalWResources::findFile(std::string, clustalw::ClustalWResourcePathType) const’:
clustalW/general/ClustalWResources.cpp:106:12: warning: array subscript 1 is above array bounds of ‘char [1]’ [-Warray-bounds=]
  106 |     delim[1] = 0;
      |     ~~~~~~~^
clustalW/general/ClustalWResources.cpp:104:10: note: while referencing ‘delim’
  104 |     char delim[1];
      |          ^~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o DebugLog.o clustalW/general/DebugLog.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o OutputFile.o clustalW/general/OutputFile.cpp
In file included from clustalW/general/OutputFile.cpp:9:
clustalW/general/OutputFile.h:26:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         std::auto_ptr<std::ofstream> file;
      |              ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/general/OutputFile.h:8:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Stats.o clustalW/general/Stats.cpp
In file included from clustalW/general/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/general/../alignment/Alignment.h:42,
                 from clustalW/general/Stats.cpp:15:
clustalW/general/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/general/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SymMatrix.o clustalW/general/SymMatrix.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o UserParameters.o clustalW/general/UserParameters.cpp
clustalW/general/UserParameters.cpp: In constructor ‘clustalw::UserParameters::UserParameters(bool)’:
clustalW/general/UserParameters.cpp:33:37: warning: unused parameter ‘log’ [-Wunused-parameter]
   33 | UserParameters::UserParameters(bool log)
      |                                ~~~~~^~~
clustalW/general/UserParameters.cpp: In member function ‘int clustalw::UserParameters::resIndex(std::string, char)’:
clustalW/general/UserParameters.cpp:475:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  475 |     register int i;
      |                  ^
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Utility.o clustalW/general/Utility.cpp
clustalW/general/Utility.cpp: In member function ‘char* clustalw::Utility::rTrim(char*)’:
clustalW/general/Utility.cpp:53:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   53 |     register int p;
      |                  ^
clustalW/general/Utility.cpp: In member function ‘bool clustalw::Utility::lineType(char*, const char*)’:
clustalW/general/Utility.cpp:251:8: warning: variable ‘n’ set but not used [-Wunused-but-set-variable]
  251 |    int n;
      |        ^
clustalW/general/Utility.cpp: In member function ‘virtual void clustalw::Utility::setInfoLabelPtr(QLabel*)’:
clustalW/general/Utility.cpp:519:39: warning: unused parameter ‘ptrToLabelObj’ [-Wunused-parameter]
  519 | void Utility::setInfoLabelPtr(QLabel* ptrToLabelObj)
      |                               ~~~~~~~~^~~~~~~~~~~~~
clustalW/general/Utility.cpp: In member function ‘double clustalw::Utility::getReal(const char*, double, double, double)’:
clustalW/general/Utility.cpp:183:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  183 |         fgets(line, MAXLINE, stdin);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~
clustalW/general/Utility.cpp: In member function ‘int clustalw::Utility::getInt(const char*, int, int, int)’:
clustalW/general/Utility.cpp:221:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  221 |         fgets(line, MAXLINE, stdin);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o VectorOutOfRange.o clustalW/general/VectorOutOfRange.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o CommandLineParser.o clustalW/interface/CommandLineParser.cpp
In file included from clustalW/interface/../fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/interface/../fileInput/../alignment/Alignment.h:42,
                 from clustalW/interface/../fileInput/FileReader.h:12,
                 from clustalW/interface/../Clustal.h:18,
                 from clustalW/interface/CommandLineParser.h:18,
                 from clustalW/interface/CommandLineParser.cpp:13:
clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/interface/../fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/interface/../fileInput/FileReader.h:11:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/interface/../Clustal.h:20:
clustalW/interface/../alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o InteractiveMenu.o clustalW/interface/InteractiveMenu.cpp
In file included from clustalW/interface/../fileInput/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/interface/../fileInput/../alignment/Alignment.h:42,
                 from clustalW/interface/../fileInput/FileReader.h:12,
                 from clustalW/interface/../Clustal.h:18,
                 from clustalW/interface/InteractiveMenu.h:15,
                 from clustalW/interface/InteractiveMenu.cpp:23:
clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/interface/../fileInput/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/interface/../fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/interface/../fileInput/FileReader.h:11:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/interface/../Clustal.h:20:
clustalW/interface/../alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/../alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/interface/InteractiveMenu.cpp: In constructor ‘clustalw::InteractiveMenu::InteractiveMenu()’:
clustalW/interface/InteractiveMenu.cpp:41:11: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=]
   41 |     catch(bad_alloc)
      |           ^~~~~~~~~
clustalW/interface/InteractiveMenu.cpp: In member function ‘int clustalw::InteractiveMenu::secStrOutputOptions()’:
clustalW/interface/InteractiveMenu.cpp:520:36: warning: this statement may fall through [-Wimplicit-fallthrough=]
  520 |                 clustalObj->getHelp('C');
      |                 ~~~~~~~~~~~~~~~~~~~^~~~~
clustalW/interface/InteractiveMenu.cpp:521:13: note: here
  521 |             case 'Q':
      |             ^~~~
clustalW/interface/InteractiveMenu.cpp: In member function ‘void clustalw::InteractiveMenu::doSystem()’:
clustalW/interface/InteractiveMenu.cpp:1190:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1190 |         system(lin1.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Iteration.o clustalW/multipleAlign/Iteration.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/Iteration.h:8,
                 from clustalW/multipleAlign/Iteration.cpp:13:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/multipleAlign/Iteration.cpp:17:
clustalW/multipleAlign/../tree/TreeInterface.h:38:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   38 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMat(vector<int>* seqWeights,
      |         ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/multipleAlign/../tree/TreeInterface.h:17:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:57:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   57 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTree(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:102:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  102 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatNJ(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:108:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  108 |         auto_ptr<AlignmentSteps> getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:133:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  133 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTreeNJ(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:138:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  138 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatUPGMA(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/../tree/TreeInterface.h:142:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  142 |         auto_ptr<AlignmentSteps> generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/multipleAlign/Iteration.cpp: In member function ‘bool clustalw::Iteration::removeFirstIterate(clustalw::Alignment*)’:
clustalW/multipleAlign/Iteration.cpp:170:9: warning: variable ‘count’ set but not used [-Wunused-but-set-variable]
  170 |     int count;
      |         ^~~~~
clustalW/multipleAlign/Iteration.cpp:231:24: warning: ignoring return value of ‘char* tmpnam(char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  231 |                 tmpnam (buffer);
      |                 ~~~~~~~^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o LowScoreSegProfile.o clustalW/multipleAlign/LowScoreSegProfile.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/LowScoreSegProfile.h:13,
                 from clustalW/multipleAlign/LowScoreSegProfile.cpp:9:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o MSA.o clustalW/multipleAlign/MSA.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/ProfileBase.h:14,
                 from clustalW/multipleAlign/MSA.h:10,
                 from clustalW/multipleAlign/MSA.cpp:16:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/multipleAlign/MSA.cpp: In member function ‘int clustalw::MSA::multiSeqAlign(clustalw::Alignment*, clustalw::DistMatrix*, std::vector<int>*, clustalw::AlignmentSteps*, int)’:
clustalW/multipleAlign/MSA.cpp:340:11: warning: unused variable ‘alignmentScore’ [-Wunused-variable]
  340 |       int alignmentScore = alnPtr->alignScore(); // ?? check, FS, 2009-05-18
      |           ^~~~~~~~~~~~~~
clustalW/multipleAlign/MSA.cpp: In member function ‘int clustalw::MSA::seqsAlignToProfile(clustalw::Alignment*, clustalw::DistMatrix*, std::vector<int>*, int, std::string)’:
clustalW/multipleAlign/MSA.cpp:359:35: warning: unused parameter ‘phylipName’ [-Wunused-parameter]
  359 |                            string phylipName)
      |                            ~~~~~~~^~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o MyersMillerProfileAlign.o clustalW/multipleAlign/MyersMillerProfileAlign.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/ProfileAlignAlgorithm.h:10,
                 from clustalW/multipleAlign/MyersMillerProfileAlign.h:10,
                 from clustalW/multipleAlign/MyersMillerProfileAlign.cpp:10:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileBase.o clustalW/multipleAlign/ProfileBase.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/ProfileBase.h:14,
                 from clustalW/multipleAlign/ProfileBase.cpp:9:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/multipleAlign/ProfileBase.cpp: In member function ‘void clustalw::ProfileBase::calcResidueSpecificPen(clustalw::SeqArray*, std::vector<int>*)’:
clustalW/multipleAlign/ProfileBase.cpp:372:25: warning: comparison is always false due to limited range of data type [-Wtype-limits]
  372 |                 if ((ix < 0) || (ix > _maxAA))
      |                      ~~~^~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileStandard.o clustalW/multipleAlign/ProfileStandard.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/ProfileStandard.h:9,
                 from clustalW/multipleAlign/ProfileStandard.cpp:9:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ProfileWithSub.o clustalW/multipleAlign/ProfileWithSub.cpp
In file included from clustalW/multipleAlign/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/multipleAlign/../alignment/Alignment.h:42,
                 from clustalW/multipleAlign/ProfileWithSub.h:9,
                 from clustalW/multipleAlign/ProfileWithSub.cpp:9:
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/multipleAlign/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o FastPairwiseAlign.o clustalW/pairwise/FastPairwiseAlign.cpp
In file included from clustalW/pairwise/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/pairwise/../alignment/Alignment.h:42,
                 from clustalW/pairwise/PairwiseAlignBase.h:10,
                 from clustalW/pairwise/FastPairwiseAlign.h:9,
                 from clustalW/pairwise/FastPairwiseAlign.cpp:10:
clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o FullPairwiseAlign.o clustalW/pairwise/FullPairwiseAlign.cpp
In file included from clustalW/pairwise/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/pairwise/../alignment/Alignment.h:42,
                 from clustalW/pairwise/PairwiseAlignBase.h:10,
                 from clustalW/pairwise/FullPairwiseAlign.h:9,
                 from clustalW/pairwise/FullPairwiseAlign.cpp:9:
clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/pairwise/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o SubMatrix.o clustalW/substitutionMatrix/SubMatrix.cpp
In file included from clustalW/substitutionMatrix/SubMatrix.cpp:15:
clustalW/substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::tempInterface(int, int)’:
clustalW/substitutionMatrix/SubMatrix.cpp:1613:35: warning: unused parameter ‘alignResidueType’ [-Wunused-parameter]
 1613 | void SubMatrix::tempInterface(int alignResidueType, int alignType)
      |                               ~~~~^~~~~~~~~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.cpp:1613:57: warning: unused parameter ‘alignType’ [-Wunused-parameter]
 1613 | void SubMatrix::tempInterface(int alignResidueType, int alignType)
      |                                                     ~~~~^~~~~~~~~
clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::getQTMatrixForHistogram(int (*)[32])’:
clustalW/substitutionMatrix/SubMatrix.cpp:1657:9: warning: variable ‘maxRes’ set but not used [-Wunused-but-set-variable]
 1657 |     int maxRes;
      |         ^~~~~~
clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘void clustalw::SubMatrix::getQTMatrixForLowScoreSeg(int (*)[32])’:
clustalW/substitutionMatrix/SubMatrix.cpp:1717:9: warning: variable ‘maxRes’ set but not used [-Wunused-but-set-variable]
 1717 |     int maxRes;
      |         ^~~~~~
clustalW/substitutionMatrix/SubMatrix.cpp: In member function ‘int clustalw::SubMatrix::readMatrixSeries(const char*, clustalw::Matrix&, clustalw::Xref&)’:
clustalW/substitutionMatrix/SubMatrix.cpp:1103:19: warning: ‘n’ may be used uninitialized [-Wmaybe-uninitialized]
 1103 |     return (maxRes);
      |                   ^
clustalW/substitutionMatrix/SubMatrix.cpp:998:9: note: ‘n’ was declared here
  998 |     int n, llimit, ulimit;
      |         ^
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o AlignmentSteps.o clustalW/tree/AlignmentSteps.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ClusterTree.o clustalW/tree/ClusterTree.cpp
In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/../alignment/Alignment.h:42,
                 from clustalW/tree/ClusterTree.h:20,
                 from clustalW/tree/ClusterTree.cpp:9:
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/tree/ClusterTree.h:23:
clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         std::auto_ptr<std::ofstream> file;
      |              ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/ClusterTree.h:16:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/ClusterTree.h:70:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |         auto_ptr<clustalw::DistMatrix> quickDistMat;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/ClusterTree.cpp: In member function ‘void clustalw::ClusterTree::calcPercIdentity(std::ofstream*, clustalw::Alignment*)’:
clustalW/tree/ClusterTree.cpp:580:9: warning: variable ‘rs’ set but not used [-Wunused-but-set-variable]
  580 |     int rs = 0, rl = 0;
      |         ^~
clustalW/tree/ClusterTree.cpp:580:17: warning: variable ‘rl’ set but not used [-Wunused-but-set-variable]
  580 |     int rs = 0, rl = 0;
      |                 ^~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o ClusterTreeOutput.o clustalW/tree/ClusterTreeOutput.cpp
In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/../alignment/Alignment.h:42,
                 from clustalW/tree/ClusterTreeOutput.h:11,
                 from clustalW/tree/ClusterTreeOutput.cpp:9:
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o NJTree.o clustalW/tree/NJTree.cpp
clustalW/tree/NJTree.cpp: In member function ‘virtual void clustalw::NJTree::generateTree(clustalw::PhyloTree*, clustalw::DistMatrix*, clustalw::SeqInfo*, std::ofstream*)’:
clustalW/tree/NJTree.cpp:164:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  164 |     register int i;
      |                  ^
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o RandomGenerator.o clustalW/tree/RandomGenerator.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Tree.o clustalW/tree/Tree.cpp
In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/../alignment/Alignment.h:42,
                 from clustalW/tree/Tree.h:13,
                 from clustalW/tree/Tree.cpp:10:
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/tree/Tree.h:26:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         auto_ptr<AlignmentSteps> createSets(int firstSeq, int lastSeq);
      |         ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/Tree.h:15:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/Tree.cpp:278:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  278 | auto_ptr<AlignmentSteps> Tree::createSets(int firstSeq, int lastSeq)
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/Tree.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::Tree::createSets(int, int)’:
clustalW/tree/Tree.cpp:280:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  280 |     auto_ptr<AlignmentSteps> progAlignSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o TreeInterface.o clustalW/tree/TreeInterface.cpp
In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/../alignment/Alignment.h:42,
                 from clustalW/tree/TreeInterface.h:19,
                 from clustalW/tree/TreeInterface.cpp:15:
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/tree/TreeInterface.h:38:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   38 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMat(vector<int>* seqWeights,
      |         ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/TreeInterface.h:17:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:57:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   57 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTree(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:102:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  102 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatNJ(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:108:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  108 |         auto_ptr<AlignmentSteps> getWeightsAndStepsUseOldGuideTreeNJ(DistMatrix* distMat,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:133:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  133 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromTreeNJ(Alignment* alignPtr,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:138:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  138 |         auto_ptr<AlignmentSteps> getWeightsAndStepsFromDistMatUPGMA(vector<int>* seqWeights,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.h:142:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  142 |         auto_ptr<AlignmentSteps> generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/tree/ClusterTree.h:23,
                 from clustalW/tree/UnRootedClusterTree.h:8,
                 from clustalW/tree/TreeInterface.cpp:17:
clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         std::auto_ptr<std::ofstream> file;
      |              ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/ClusterTree.h:70:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |         auto_ptr<clustalw::DistMatrix> quickDistMat;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/tree/TreeInterface.cpp:18:
clustalW/tree/Tree.h:26:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         auto_ptr<AlignmentSteps> createSets(int firstSeq, int lastSeq);
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/tree/TreeInterface.cpp:23:
clustalW/tree/UPGMA/RootedClusterTree.h:22:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   22 |         auto_ptr<AlignmentSteps> treeFromDistMatrix(RootedGuideTree* phyloTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp:31:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   31 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp:103:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  103 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp:195:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  195 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::TreeInterface::getWeightsAndStepsFromDistMatNJ(std::vector<int>*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’:
clustalW/tree/TreeInterface.cpp:200:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  200 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: At global scope:
clustalW/tree/TreeInterface.cpp:208:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  208 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::TreeInterface::getWeightsAndStepsUseOldGuideTreeNJ(clustalw::DistMatrix*, clustalw::Alignment*, std::string*, std::vector<int>*, int, int, bool*)’:
clustalW/tree/TreeInterface.cpp:214:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  214 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: At global scope:
clustalW/tree/TreeInterface.cpp:439:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  439 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::TreeInterface::getWeightsAndStepsFromTreeNJ(clustalw::Alignment*, clustalw::DistMatrix*, std::string*, std::vector<int>*, int, int, bool*)’:
clustalW/tree/TreeInterface.cpp:445:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  445 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: At global scope:
clustalW/tree/TreeInterface.cpp:485:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  485 | auto_ptr<AlignmentSteps>
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::TreeInterface::getWeightsAndStepsFromDistMatUPGMA(std::vector<int>*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’:
clustalW/tree/TreeInterface.cpp:490:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  490 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: At global scope:
clustalW/tree/TreeInterface.cpp:503:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  503 | auto_ptr<AlignmentSteps> TreeInterface::generateTreeFromDistMatUPGMA(RootedGuideTree* guideTree, DistMatrix* distMat, Alignment *alignPtr, int seq1, int nSeqs,
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/TreeInterface.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::TreeInterface::generateTreeFromDistMatUPGMA(clustalw::RootedGuideTree*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string*, bool*)’:
clustalW/tree/TreeInterface.cpp:506:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  506 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o UnRootedClusterTree.o clustalW/tree/UnRootedClusterTree.cpp
In file included from clustalW/tree/../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/../alignment/Alignment.h:42,
                 from clustalW/tree/ClusterTree.h:20,
                 from clustalW/tree/UnRootedClusterTree.h:8,
                 from clustalW/tree/UnRootedClusterTree.cpp:9:
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/tree/ClusterTree.h:23:
clustalW/tree/../general/OutputFile.h:26:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         std::auto_ptr<std::ofstream> file;
      |              ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/ClusterTree.h:16:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/ClusterTree.h:70:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |         auto_ptr<clustalw::DistMatrix> quickDistMat;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o Node.o clustalW/tree/UPGMA/Node.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o RootedClusterTree.o clustalW/tree/UPGMA/RootedClusterTree.cpp
In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/UPGMA/../../alignment/Alignment.h:42,
                 from clustalW/tree/UPGMA/../ClusterTree.h:20,
                 from clustalW/tree/UPGMA/RootedClusterTree.h:8,
                 from clustalW/tree/UPGMA/RootedClusterTree.cpp:9:
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/tree/UPGMA/../ClusterTree.h:23:
clustalW/tree/UPGMA/../../general/OutputFile.h:26:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   26 |         std::auto_ptr<std::ofstream> file;
      |              ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/UPGMA/../ClusterTree.h:16:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/../ClusterTree.h:70:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |         auto_ptr<clustalw::DistMatrix> quickDistMat;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/RootedClusterTree.h:22:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   22 |         auto_ptr<AlignmentSteps> treeFromDistMatrix(RootedGuideTree* phyloTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/tree/UPGMA/RootedClusterTree.cpp:11:
clustalW/tree/UPGMA/UPGMAAlgorithm.h:23:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   23 |         auto_ptr<AlignmentSteps> generateTree(RootedGuideTree* phyTree,
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/UPGMAAlgorithm.h:51:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   51 |         auto_ptr<AlignmentSteps> progSteps;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/RootedClusterTree.cpp:17:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   17 | auto_ptr<AlignmentSteps> RootedClusterTree::treeFromDistMatrix(RootedGuideTree* phyloTree,DistMatrix* distMat, Alignment *alignPtr,
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/RootedClusterTree.cpp: In member function ‘std::auto_ptr<clustalw::AlignmentSteps> clustalw::RootedClusterTree::treeFromDistMatrix(clustalw::RootedGuideTree*, clustalw::DistMatrix*, clustalw::Alignment*, int, int, std::string&)’:
clustalW/tree/UPGMA/RootedClusterTree.cpp:21:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   21 |     auto_ptr<AlignmentSteps> progSteps;
      |     ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o RootedGuideTree.o clustalW/tree/UPGMA/RootedGuideTree.cpp
In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/UPGMA/../../alignment/Alignment.h:42,
                 from clustalW/tree/UPGMA/RootedGuideTree.h:17,
                 from clustalW/tree/UPGMA/RootedGuideTree.cpp:10:
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o RootedTreeOutput.o clustalW/tree/UPGMA/RootedTreeOutput.cpp
In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/UPGMA/../../alignment/Alignment.h:42,
                 from clustalW/tree/UPGMA/RootedGuideTree.h:17,
                 from clustalW/tree/UPGMA/RootedTreeOutput.h:15,
                 from clustalW/tree/UPGMA/RootedTreeOutput.cpp:9:
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o UPGMAAlgorithm.o clustalW/tree/UPGMA/UPGMAAlgorithm.cpp
In file included from clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/tree/UPGMA/../../alignment/Alignment.h:42,
                 from clustalW/tree/UPGMA/RootedGuideTree.h:17,
                 from clustalW/tree/UPGMA/UPGMAAlgorithm.h:8,
                 from clustalW/tree/UPGMA/UPGMAAlgorithm.cpp:4:
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/tree/UPGMA/../../alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
clustalW/tree/UPGMA/UPGMAAlgorithm.h:23:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   23 |         auto_ptr<AlignmentSteps> generateTree(RootedGuideTree* phyTree,
      |         ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from clustalW/tree/UPGMA/UPGMAAlgorithm.h:10:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/UPGMAAlgorithm.h:51:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   51 |         auto_ptr<AlignmentSteps> progSteps;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/tree/UPGMA/UPGMAAlgorithm.cpp:27:1: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   27 | auto_ptr<AlignmentSteps> UPGMAAlgorithm::generateTree(RootedGuideTree* phyTree,
      | ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -dM -E -o moc_predefs.h /usr/lib/riscv64-linux-gnu/qt5/mkspecs/features/data/dummy.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include AlignmentFormatOptions.h -o moc_AlignmentFormatOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentFormatOptions.o moc_AlignmentFormatOptions.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include AlignmentParameters.h -o moc_AlignmentParameters.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentParameters.o moc_AlignmentParameters.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include AlignmentViewerWidget.h -o moc_AlignmentViewerWidget.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentViewerWidget.o moc_AlignmentViewerWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentViewerWidget.h:36,
                 from moc_AlignmentViewerWidget.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include AlignmentWidget.h -o moc_AlignmentWidget.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignmentWidget.o moc_AlignmentWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentWidget.h:41,
                 from moc_AlignmentWidget.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include AlignOutputFileNames.h -o moc_AlignOutputFileNames.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_AlignOutputFileNames.o moc_AlignOutputFileNames.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from AlignOutputFileNames.h:10,
                 from moc_AlignOutputFileNames.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
AlignOutputFileNames.h:106:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  106 |     auto_ptr<clustalw::AlignmentFileNames> outFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from moc_AlignOutputFileNames.cpp:9:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include BootstrapTreeDialog.h -o moc_BootstrapTreeDialog.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_BootstrapTreeDialog.o moc_BootstrapTreeDialog.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from BootstrapTreeDialog.h:11,
                 from moc_BootstrapTreeDialog.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
BootstrapTreeDialog.h:70:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   70 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from moc_BootstrapTreeDialog.cpp:9:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include ColorFileXmlParser.h -o moc_ColorFileXmlParser.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ColorFileXmlParser.o moc_ColorFileXmlParser.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from ColorParameters.h:11,
                 from ColorFileXmlParser.h:9,
                 from moc_ColorFileXmlParser.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include ColumnScoreParams.h -o moc_ColumnScoreParams.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ColumnScoreParams.o moc_ColumnScoreParams.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include FileDialog.h -o moc_FileDialog.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_FileDialog.o moc_FileDialog.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include HelpDisplayWidget.h -o moc_HelpDisplayWidget.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_HelpDisplayWidget.o moc_HelpDisplayWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HelpDisplayWidget.h:18,
                 from moc_HelpDisplayWidget.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include HistogramWidget.h -o moc_HistogramWidget.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_HistogramWidget.o moc_HistogramWidget.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include LowScoringSegParams.h -o moc_LowScoringSegParams.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_LowScoringSegParams.o moc_LowScoringSegParams.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include mainwindow.h -o moc_mainwindow.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_mainwindow.o moc_mainwindow.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from AlignmentViewerWidget.h:36,
                 from mainwindow.h:37,
                 from moc_mainwindow.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
In file included from clustalW/Clustal.h:18,
                 from mainwindow.h:45:
clustalW/fileInput/FileReader.h:42:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   42 |         void checkInfile(int* nseqs, auto_ptr<FileParser>& fileParser);
      |                                      ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from moc_mainwindow.cpp:9:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from clustalW/Clustal.h:20:
clustalW/alignment/AlignmentOutput.h:68:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   68 |         bool openExplicitFile(auto_ptr<ofstream>& outFile, string fileName);
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:69:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   69 |         string openOutputFile(auto_ptr<ofstream>& outFile, string prompt, string path,
      |                               ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:75:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   75 |         auto_ptr<ofstream> clustalOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:76:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   76 |         auto_ptr<ofstream> gcgOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:77:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   77 |         auto_ptr<ofstream> nbrfOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:78:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   78 |         auto_ptr<ofstream> phylipOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:79:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   79 |         auto_ptr<ofstream> gdeOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:80:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   80 |         auto_ptr<ofstream> nexusOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
clustalW/alignment/AlignmentOutput.h:81:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   81 |         auto_ptr<ofstream> fastaOutFile;
      |         ^~~~~~~~
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include PairwiseParams.h -o moc_PairwiseParams.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_PairwiseParams.o moc_PairwiseParams.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include ProteinGapParameters.h -o moc_ProteinGapParameters.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_ProteinGapParameters.o moc_ProteinGapParameters.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include PSPrinter.h -o moc_PSPrinter.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_PSPrinter.o moc_PSPrinter.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from HardCodedColorScheme.h:8,
                 from ColorParameters.h:11,
                 from PSPrinter.h:11,
                 from moc_PSPrinter.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include SaveSeqFile.h -o moc_SaveSeqFile.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SaveSeqFile.o moc_SaveSeqFile.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from SaveSeqFile.h:9,
                 from moc_SaveSeqFile.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include SearchForString.h -o moc_SearchForString.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SearchForString.o moc_SearchForString.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include SecStructOptions.h -o moc_SecStructOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SecStructOptions.o moc_SecStructOptions.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include SeqNameWidget.h -o moc_SeqNameWidget.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_SeqNameWidget.o moc_SeqNameWidget.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from SeqNameWidget.h:41,
                 from moc_SeqNameWidget.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include TreeFormatOptions.h -o moc_TreeFormatOptions.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_TreeFormatOptions.o moc_TreeFormatOptions.cpp
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include TreeOutputFileNames.h -o moc_TreeOutputFileNames.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_TreeOutputFileNames.o moc_TreeOutputFileNames.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from TreeOutputFileNames.h:10,
                 from moc_TreeOutputFileNames.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
TreeOutputFileNames.h:73:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   73 |     auto_ptr<clustalw::TreeNames> treeFileNames;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from moc_TreeOutputFileNames.cpp:9:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
/usr/lib/qt5/bin/moc -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB --include /<<PKGBUILDDIR>>/moc_predefs.h -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>> -I/<<PKGBUILDDIR>>/clustalW/general -I/<<PKGBUILDDIR>>/clustalW/substitutionMatrix -I/<<PKGBUILDDIR>>/clustalW/alignment -I/<<PKGBUILDDIR>>/clustalW -I/<<PKGBUILDDIR>>/clustalW/fileInput -I/<<PKGBUILDDIR>>/clustalW/interface -I/<<PKGBUILDDIR>>/clustalW/pairwise -I/<<PKGBUILDDIR>>/clustalW/multipleAlign -I/<<PKGBUILDDIR>>/clustalW/tree -I/<<PKGBUILDDIR>>/clustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I/usr/riscv64-linux-gnu/include/c++/14 -I/usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu -I/usr/riscv64-linux-gnu/include/c++/14/backward -I/usr/lib/gcc-cross/riscv64-linux-gnu/14/include -I/usr/riscv64-linux-gnu/include -I/usr/include/riscv64-linux-gnu -I/usr/include WritePostscriptFile.h -o moc_WritePostscriptFile.cpp
riscv64-linux-gnu-g++ -c -pipe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -D_REENTRANT -fPIC -DOS_UNIX -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_XML_LIB -DQT_CORE_LIB -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I. -I. -IclustalW/general -IclustalW/substitutionMatrix -IclustalW/alignment -IclustalW -IclustalW/fileInput -IclustalW/interface -IclustalW/pairwise -IclustalW/multipleAlign -IclustalW/tree -IclustalW/tree/UPGMA -I/usr/include/riscv64-linux-gnu/qt5 -I/usr/include/riscv64-linux-gnu/qt5/QtWidgets -I/usr/include/riscv64-linux-gnu/qt5/QtGui -I/usr/include/riscv64-linux-gnu/qt5/QtXml -I/usr/include/riscv64-linux-gnu/qt5/QtCore -I. -I/usr/lib/riscv64-linux-gnu/qt5/mkspecs/linux-g++ -o moc_WritePostscriptFile.o moc_WritePostscriptFile.cpp
In file included from clustalW/alignment/../substitutionMatrix/globalmatrix.h:8,
                 from clustalW/alignment/Alignment.h:42,
                 from ClustalQtParams.h:13,
                 from WritePostscriptFile.h:10,
                 from moc_WritePostscriptFile.cpp:10:
clustalW/alignment/../substitutionMatrix/SubMatrix.h:96:62: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   96 |         void printInFormat(vector<short>& temp, char* name = "tempfile.out");
      |                                                              ^~~~~~~~~~~~~~
clustalW/alignment/../substitutionMatrix/SubMatrix.h:97:66: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
   97 |         void printVectorToFile(vector<short>& temp, char* name = "tempfile.out");
      |                                                                  ^~~~~~~~~~~~~~
WritePostscriptFile.h:88:5: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   88 |     auto_ptr<PostscriptFileParams> params;
      |     ^~~~~~~~
In file included from /usr/riscv64-linux-gnu/include/c++/14/memory:78,
                 from moc_WritePostscriptFile.cpp:9:
/usr/riscv64-linux-gnu/include/c++/14/bits/unique_ptr.h:59:28: note: declared here
   59 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wl,-z,relro -Wl,-z,now -o clustalx AlignmentFormatOptions.o AlignmentParameters.o AlignmentViewerWidget.o AlignmentWidget.o AlignOutputFileNames.o BootstrapTreeDialog.o ColorFileXmlParser.o ColorParameters.o ColumnScoreParams.o FileDialog.o HardCodedColorScheme.o HelpDisplayWidget.o HistogramWidget.o KeyController.o LowScoringSegParams.o main.o mainwindow.o PairwiseParams.o PostscriptFileParams.o ProteinGapParameters.o PSPrinter.o QTUtility.o Resources.o SaveSeqFile.o SearchForString.o SecStructOptions.o SeqNameWidget.o TreeFormatOptions.o TreeOutputFileNames.o WritePostscriptFile.o Clustal.o Help.o Alignment.o AlignmentOutput.o ObjectiveScore.o Sequence.o ClustalFileParser.o EMBLFileParser.o FileParser.o FileReader.o GDEFileParser.o InFileStream.o MSFFileParser.o PearsonFileParser.o PIRFileParser.o RSFFileParser.o ClustalWResources.o DebugLog.o OutputFile.o Stats.o SymMatrix.o UserParameters.o Utility.o VectorOutOfRange.o CommandLineParser.o InteractiveMenu.o Iteration.o LowScoreSegProfile.o MSA.o MyersMillerProfileAlign.o ProfileBase.o ProfileStandard.o ProfileWithSub.o FastPairwiseAlign.o FullPairwiseAlign.o SubMatrix.o AlignmentSteps.o ClusterTree.o ClusterTreeOutput.o NJTree.o RandomGenerator.o Tree.o TreeInterface.o UnRootedClusterTree.o Node.o RootedClusterTree.o RootedGuideTree.o RootedTreeOutput.o UPGMAAlgorithm.o moc_AlignmentFormatOptions.o moc_AlignmentParameters.o moc_AlignmentViewerWidget.o moc_AlignmentWidget.o moc_AlignOutputFileNames.o moc_BootstrapTreeDialog.o moc_ColorFileXmlParser.o moc_ColumnScoreParams.o moc_FileDialog.o moc_HelpDisplayWidget.o moc_HistogramWidget.o moc_LowScoringSegParams.o moc_mainwindow.o moc_PairwiseParams.o moc_ProteinGapParameters.o moc_PSPrinter.o moc_SaveSeqFile.o moc_SearchForString.o moc_SecStructOptions.o moc_SeqNameWidget.o moc_TreeFormatOptions.o moc_TreeOutputFileNames.o moc_WritePostscriptFile.o   /usr/lib/riscv64-linux-gnu/libQt5Widgets.so /usr/lib/riscv64-linux-gnu/libQt5Gui.so /usr/lib/riscv64-linux-gnu/libQt5Xml.so /usr/lib/riscv64-linux-gnu/libQt5Core.so -lGL -lpthread   
/usr/lib/gcc-cross/riscv64-linux-gnu/14/../../../../riscv64-linux-gnu/bin/ld: Iteration.o: in function `clustalw::Iteration::removeFirstIterate(clustalw::Alignment*)':
./clustalW/multipleAlign/Iteration.cpp:231:(.text+0xd26): warning: the use of `tmpnam' is dangerous, better use `mkstemp'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck"
   create-stamp debian/debhelper-build-stamp
   dh_prep -a
   dh_auto_install --destdir=debian/clustalx/ -a
   dh_install -a
   dh_installdocs -a
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs debian/CHANGELOG.upstream
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installman -a
   dh_installmime -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
 diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged
   dh_installdeb -a
   dh_gencontrol -a
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'clustalx' in '../clustalx_2.1+lgpl-9_riscv64.deb'.
dpkg-deb: building package 'clustalx-dbgsym' in '../clustalx-dbgsym_2.1+lgpl-9_riscv64.deb'.
 dpkg-genbuildinfo --build=any -O../clustalx_2.1+lgpl-9_riscv64.buildinfo
 dpkg-genchanges --build=any -O../clustalx_2.1+lgpl-9_riscv64.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2025-04-06T08:45:35Z

+------------------------------------------------------------------------------+
| Finished Timed Build Commands                                                |
+------------------------------------------------------------------------------+


rm -Rf /<<PKGBUILDDIR>>/
------------------------------------------------


I: Finished running 'rm -Rf /<<PKGBUILDDIR>>/'.

Finished processing commands.
--------------------------------------------------------------------------------

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


clustalx_2.1+lgpl-9_riscv64.changes:
------------------------------------

Format: 1.8
Date: Fri, 04 Dec 2020 22:57:37 +0100
Source: clustalx
Binary: clustalx clustalx-dbgsym
Built-For-Profiles: cross nocheck
Architecture: riscv64
Version: 2.1+lgpl-9
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 clustalx   - Multiple alignment of nucleic acid and protein sequences (graphic
Changes:
 clustalx (2.1+lgpl-9) unstable; urgency=medium
 .
   * Standards-Version: 4.5.1 (routine-update)
   * debhelper-compat 13 (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
   * Set field Upstream-Contact in debian/copyright.
   * Remove obsolete field Contact from debian/upstream/metadata (already present
     in machine-readable debian/copyright).
   * watch file standard 4 (routine-update)
   * No quotet entry in mailcap
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+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: clustalx
Binary: clustalx clustalx-dbgsym
Architecture: riscv64
Version: 2.1+lgpl-9
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Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Sun, 06 Apr 2025 08:45:34 +0000
Build-Path: /<<PKGBUILDDIR>>
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 libdrm-intel1 (= 2.4.124-2),
 libdrm2 (= 2.4.124-2),
 libedit2 (= 3.1-20250104-1),
 libegl-dev (= 1.7.0-1+b2),
 libegl-mesa0 (= 25.0.3-1),
 libegl1 (= 1.7.0-1+b2),
 libelf1t64 (= 0.192-4),
 libevdev2 (= 1.13.4+dfsg-1),
 libexpat1 (= 2.7.1-1),
 libffi8 (= 3.4.7-1),
 libfile-stripnondeterminism-perl (= 1.14.1-2),
 libfontconfig1 (= 2.15.0-2.2),
 libfreetype6 (= 2.13.3+dfsg-1),
 libgbm1 (= 25.0.3-1),
 libgcc-14-dev (= 14.2.0-19),
 libgcc-s1 (= 14.2.0-19),
 libgdbm-compat4t64 (= 1.24-2),
 libgdbm6t64 (= 1.24-2),
 libgl-dev (= 1.7.0-1+b2),
 libgl1 (= 1.7.0-1+b2),
 libgl1-mesa-dri (= 25.0.3-1),
 libglib2.0-0t64 (= 2.84.1-1),
 libglu1-mesa (= 9.0.2-1.1+b3),
 libglu1-mesa-dev (= 9.0.2-1.1+b3),
 libglvnd0 (= 1.7.0-1+b2),
 libglx-dev (= 1.7.0-1+b2),
 libglx-mesa0 (= 25.0.3-1),
 libglx0 (= 1.7.0-1+b2),
 libgmp10 (= 2:6.3.0+dfsg-3),
 libgnutls30t64 (= 3.8.9-2),
 libgomp1 (= 14.2.0-19),
 libgprofng0 (= 2.44-3),
 libgraphite2-3 (= 1.3.14-2+b1),
 libgssapi-krb5-2 (= 1.21.3-5),
 libgudev-1.0-0 (= 238-6),
 libharfbuzz0b (= 10.2.0-1+b1),
 libhogweed6t64 (= 3.10.1-1),
 libhwasan0 (= 14.2.0-19),
 libice6 (= 2:1.1.1-1),
 libicu76 (= 76.1-3),
 libidn2-0 (= 2.3.8-2),
 libinput-bin (= 1.28.1-1),
 libinput10 (= 1.28.1-1),
 libisl23 (= 0.27-1),
 libitm1 (= 14.2.0-19),
 libjansson4 (= 2.14-2+b3),
 libjpeg62-turbo (= 1:2.1.5-3.1),
 libk5crypto3 (= 1.21.3-5),
 libkeyutils1 (= 1.6.3-5),
 libkrb5-3 (= 1.21.3-5),
 libkrb5support0 (= 1.21.3-5),
 liblastlog2-2 (= 2.41-3),
 libllvm19 (= 1:19.1.7-3),
 liblsan0 (= 14.2.0-19),
 liblzma5 (= 5.8.1-1),
 libmagic-mgc (= 1:5.46-4),
 libmagic1t64 (= 1:5.46-4),
 libmd0 (= 1.1.0-2+b1),
 libmd4c0 (= 0.5.2-2+b1),
 libmount1 (= 2.41-3),
 libmpc3 (= 1.3.1-1+b3),
 libmpfr6 (= 4.2.2-1),
 libmtdev1t64 (= 1.1.7-1),
 libncursesw6 (= 6.5+20250216-2),
 libnettle8t64 (= 3.10.1-1),
 libopengl-dev (= 1.7.0-1+b2),
 libopengl0 (= 1.7.0-1+b2),
 libp11-kit0 (= 0.25.5-3),
 libpam-modules (= 1.7.0-3),
 libpam-modules-bin (= 1.7.0-3),
 libpam-runtime (= 1.7.0-3),
 libpam0g (= 1.7.0-3),
 libpciaccess0 (= 0.17-3+b3),
 libpcre2-16-0 (= 10.45-1),
 libpcre2-8-0 (= 10.45-1),
 libperl5.40 (= 5.40.1-2),
 libpipeline1 (= 1.5.8-1),
 libpng16-16t64 (= 1.6.47-1.1),
 libpython3-stdlib (= 3.13.2-2),
 libpython3.13-minimal (= 3.13.2-3),
 libpython3.13-stdlib (= 3.13.2-3),
 libqt5concurrent5t64 (= 5.15.15+dfsg-5),
 libqt5core5t64 (= 5.15.15+dfsg-5),
 libqt5dbus5t64 (= 5.15.15+dfsg-5),
 libqt5designer5 (= 5.15.15-6),
 libqt5designercomponents5 (= 5.15.15-6),
 libqt5gui5t64 (= 5.15.15+dfsg-5),
 libqt5help5 (= 5.15.15-6),
 libqt5network5t64 (= 5.15.15+dfsg-5),
 libqt5printsupport5t64 (= 5.15.15+dfsg-5),
 libqt5qml5 (= 5.15.15+dfsg-3),
 libqt5qmlmodels5 (= 5.15.15+dfsg-3),
 libqt5quick5 (= 5.15.15+dfsg-3),
 libqt5quickwidgets5 (= 5.15.15+dfsg-3),
 libqt5sql5-sqlite (= 5.15.15+dfsg-5),
 libqt5sql5t64 (= 5.15.15+dfsg-5),
 libqt5test5t64 (= 5.15.15+dfsg-5),
 libqt5widgets5t64 (= 5.15.15+dfsg-5),
 libqt5xml5t64 (= 5.15.15+dfsg-5),
 libquadmath0 (= 14.2.0-19),
 libreadline8t64 (= 8.2-6),
 libseccomp2 (= 2.6.0-2),
 libselinux1 (= 3.8.1-1),
 libsensors-config (= 1:3.6.0-10),
 libsensors5 (= 1:3.6.0-10+b1),
 libsframe1 (= 2.44-3),
 libsm6 (= 2:1.2.6-1),
 libsmartcols1 (= 2.41-3),
 libsqlite3-0 (= 3.46.1-2),
 libssl3t64 (= 3.4.1-1),
 libstdc++-14-dev (= 14.2.0-19),
 libstdc++6 (= 14.2.0-19),
 libsystemd0 (= 257.4-9),
 libtasn1-6 (= 4.20.0-2),
 libtinfo6 (= 6.5+20250216-2),
 libtool (= 2.5.4-4),
 libtsan2 (= 14.2.0-19),
 libubsan1 (= 14.2.0-19),
 libuchardet0 (= 0.0.8-1+b2),
 libudev1 (= 257.4-9),
 libunistring5 (= 1.3-2),
 libuuid1 (= 2.41-3),
 libvulkan-dev (= 1.4.309.0-1),
 libvulkan1 (= 1.4.309.0-1),
 libwacom-common (= 2.14.0-1),
 libwacom9 (= 2.14.0-1),
 libwayland-client0 (= 1.23.1-3),
 libwayland-server0 (= 1.23.1-3),
 libx11-6 (= 2:1.8.12-1),
 libx11-data (= 2:1.8.12-1),
 libx11-dev (= 2:1.8.12-1),
 libx11-xcb1 (= 2:1.8.12-1),
 libxau-dev (= 1:1.0.11-1),
 libxau6 (= 1:1.0.11-1),
 libxcb-dri3-0 (= 1.17.0-2+b1),
 libxcb-glx0 (= 1.17.0-2+b1),
 libxcb-icccm4 (= 0.4.2-1),
 libxcb-image0 (= 0.4.0-2+b2),
 libxcb-keysyms1 (= 0.4.1-1),
 libxcb-present0 (= 1.17.0-2+b1),
 libxcb-randr0 (= 1.17.0-2+b1),
 libxcb-render-util0 (= 0.3.10-1),
 libxcb-render0 (= 1.17.0-2+b1),
 libxcb-shape0 (= 1.17.0-2+b1),
 libxcb-shm0 (= 1.17.0-2+b1),
 libxcb-sync1 (= 1.17.0-2+b1),
 libxcb-util1 (= 0.4.1-1),
 libxcb-xfixes0 (= 1.17.0-2+b1),
 libxcb-xinerama0 (= 1.17.0-2+b1),
 libxcb-xinput0 (= 1.17.0-2+b1),
 libxcb-xkb1 (= 1.17.0-2+b1),
 libxcb1 (= 1.17.0-2+b1),
 libxcb1-dev (= 1.17.0-2+b1),
 libxdmcp-dev (= 1:1.1.5-1),
 libxdmcp6 (= 1:1.1.5-1),
 libxext-dev (= 2:1.3.4-1+b3),
 libxext6 (= 2:1.3.4-1+b3),
 libxkbcommon-x11-0 (= 1.7.0-2),
 libxkbcommon0 (= 1.7.0-2),
 libxml2 (= 2.12.7+dfsg+really2.9.14-0.4),
 libxrender1 (= 1:0.9.12-1),
 libxshmfence1 (= 1.3.3-1),
 libxxf86vm1 (= 1:1.1.4-1+b4),
 libz3-4 (= 4.13.3-1),
 libzstd1 (= 1.5.7+dfsg-1),
 linux-libc-dev (= 6.12.21-1),
 m4 (= 1.4.19-7),
 make (= 4.4.1-1),
 man-db (= 2.13.0-1),
 mawk (= 1.3.4.20250131-1),
 media-types (= 13.0.0),
 mesa-libgallium (= 25.0.3-1),
 ncurses-base (= 6.5+20250216-2),
 ncurses-bin (= 6.5+20250216-2),
 netbase (= 6.5),
 openssl-provider-legacy (= 3.4.1-1),
 patch (= 2.7.6-7),
 perl (= 5.40.1-2),
 perl-base (= 5.40.1-2),
 perl-modules-5.40 (= 5.40.1-2),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.13.2-2),
 python3-minimal (= 3.13.2-2),
 python3.13 (= 3.13.2-3),
 python3.13-minimal (= 3.13.2-3),
 qdoc-qt5 (= 5.15.15-6),
 qhelpgenerator-qt5 (= 5.15.15-6),
 qt5-assistant (= 5.15.15-6),
 qt5-qmake (= 5.15.15+dfsg-5),
 qt5-qmake-bin (= 5.15.15+dfsg-5),
 qtattributionsscanner-qt5 (= 5.15.15-6),
 qtbase5-dev (= 5.15.15+dfsg-5),
 qtbase5-dev-tools (= 5.15.15+dfsg-5),
 qtchooser (= 66-2),
 qttools5-dev-tools (= 5.15.15-6),
 readline-common (= 8.2-6),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.24),
 shared-mime-info (= 2.4-5+b2),
 sysvinit-utils (= 3.14-4),
 tar (= 1.35+dfsg-3.1),
 tzdata (= 2025b-1),
 util-linux (= 2.41-3),
 x11-common (= 1:7.7+24),
 x11proto-dev (= 2024.1-1),
 xkb-data (= 2.42-1),
 xorg-sgml-doctools (= 1:1.11-1.1),
 xtrans-dev (= 1.4.0-1),
 xz-utils (= 5.8.1-1),
 zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1)
Environment:
 DEB_BUILD_OPTIONS="nocheck parallel=1"
 DEB_BUILD_PROFILES="cross nocheck"
 LANG="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 LC_CTYPE="C.UTF-8"
 SOURCE_DATE_EPOCH="1607119057"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


clustalx-dbgsym_2.1+lgpl-9_riscv64.deb
--------------------------------------

 new Debian package, version 2.0.
 size 7962844 bytes: control archive=544 bytes.
     383 bytes,    12 lines      control
     106 bytes,     1 lines      md5sums
 Package: clustalx-dbgsym
 Source: clustalx
 Version: 2.1+lgpl-9
 Auto-Built-Package: debug-symbols
 Architecture: riscv64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 8914
 Depends: clustalx (= 2.1+lgpl-9)
 Section: debug
 Priority: optional
 Description: debug symbols for clustalx
 Build-Ids: 86e38019a1605a5e48669291dc72e90cec3f9c9e

drwxr-xr-x root/root         0 2020-12-04 21:57 ./
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/debug/.build-id/86/
-rw-r--r-- root/root   9117632 2020-12-04 21:57 ./usr/lib/debug/.build-id/86/e38019a1605a5e48669291dc72e90cec3f9c9e.debug
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-12-04 21:57 ./usr/share/doc/clustalx-dbgsym -> clustalx


clustalx_2.1+lgpl-9_riscv64.deb
-------------------------------

 new Debian package, version 2.0.
 size 444396 bytes: control archive=1464 bytes.
    1560 bytes,    27 lines      control
     874 bytes,    13 lines      md5sums
 Package: clustalx
 Version: 2.1+lgpl-9
 Architecture: riscv64
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1113
 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.4), libqt5core5t64 (>= 5.7.0), libqt5gui5t64 (>= 5.2.0) | libqt5gui5-gles (>= 5.2.0), libqt5widgets5t64 (>= 5.0.2), libqt5xml5t64 (>= 5.0.2), libstdc++6 (>= 14)
 Suggests: clustalw, texlive-latex-extra, boxshade
 Section: science
 Priority: optional
 Homepage: http://www.clustal.org/clustal2/
 Description: Multiple alignment of nucleic acid and protein sequences (graphical interface)
  This package offers a GUI interface for the Clustal multiple sequence
  alignment program. It provides an integrated environment for performing
  multiple sequence- and profile-alignments to analyse the results.
  The sequence alignment is displayed in a window on the screen.
  A versatile coloring scheme has been incorporated to highlight conserved
  features in the alignment. For professional presentations, one should
  use the texshade LaTeX package or boxshade.
  .
  The pull-down menus at the top of the window allow you to select all the
  options required for traditional multiple sequence and profile alignment.
  You can cut-and-paste sequences to change the order of the alignment; you can
  select a subset of sequences to be aligned; you can select a sub-range of the
  alignment to be realigned and inserted back into the original alignment.
  .
  An alignment quality analysis can be performed and low-scoring segments or
  exceptional residues can be highlighted.

drwxr-xr-x root/root         0 2020-12-04 21:57 ./
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/bin/
-rwxr-xr-x root/root   1033160 2020-12-04 21:57 ./usr/bin/clustalx
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/mime/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/lib/mime/packages/
-rw-r--r-- root/root       112 2020-12-04 21:57 ./usr/lib/mime/packages/clustalx
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/applications/
-rw-r--r-- root/root       876 2020-12-04 21:57 ./usr/share/applications/clustalx.desktop
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/clustalx/
-rw-r--r-- root/root     69428 2010-11-17 10:12 ./usr/share/clustalx/clustalx.hlp
-rw-r--r-- root/root       847 2010-11-17 10:12 ./usr/share/clustalx/coldna.xml
-rw-r--r-- root/root      1276 2010-11-17 10:12 ./usr/share/clustalx/colprint.xml
-rw-r--r-- root/root      5047 2010-11-17 10:12 ./usr/share/clustalx/colprot.xml
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/doc/clustalx/
-rw-r--r-- root/root       410 2020-12-04 21:57 ./usr/share/doc/clustalx/README.Debian
-rw-r--r-- root/root       790 2020-12-04 21:57 ./usr/share/doc/clustalx/changelog.Debian.gz
-rw-r--r-- root/root      3440 2020-12-04 21:57 ./usr/share/doc/clustalx/changelog.gz
-rw-r--r-- root/root      1860 2020-12-04 21:57 ./usr/share/doc/clustalx/copyright
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/man/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/man/man1/
-rw-r--r-- root/root       797 2020-12-04 21:57 ./usr/share/man/man1/clustalx.1.gz
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/mime/
drwxr-xr-x root/root         0 2020-12-04 21:57 ./usr/share/mime/packages/
-rw-r--r-- root/root       513 2020-12-04 21:57 ./usr/share/mime/packages/clustalx.xml


lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian:amd64
Filtered Build-Depends: lintian:amd64
dpkg-deb: warning: root directory /<<RESOLVERDIR>>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119
dpkg-deb: hint: you might need to pass --root-owner-group, see <https://wiki.debian.org/Teams/Dpkg/RootlessBuilds> for further details
dpkg-deb: warning: ignoring 1 warning about the control file(s)
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1354 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1437 B]
Fetched 3406 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
Execute external solver...
The following additional packages will be installed:
  appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl
  libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl
  libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl
  libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl
  libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl
  libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl
  libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl
  libdevel-stacktrace-perl libdynaloader-functions-perl
  libemail-address-xs-perl libencode-locale-perl libexception-class-perl
  libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl
  libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libgpg-error0
  libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl
  libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl
  libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
  libhttp-negotiate-perl libimport-into-perl libio-html-perl
  libio-interactive-perl libio-socket-ssl-perl libio-string-perl
  libipc-run3-perl libipc-system-simple-perl libiterator-perl
  libiterator-util-perl libjson-maybexs-perl libldap2 liblist-compare-perl
  liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl
  libmodule-implementation-perl libmodule-runtime-perl libmoo-perl
  libmoox-aliases-perl libmouse-perl libnamespace-clean-perl
  libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl
  libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14
  libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl
  libpackage-stash-perl libparams-classify-perl libparams-util-perl
  libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl
  libproc-processtable-perl libproc2-0 libpsl5t64 libregexp-wildcards-perl
  librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db
  libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl
  libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl
  libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
  libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl
  libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl
  libtext-levenshteinxs-perl libtext-markdown-discount-perl
  libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl
  libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl
  liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl
  libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl
  libyaml-0-2 libyaml-libyaml-perl lintian lzop openssl patchutils
  perl-openssl-defaults plzip procps t1utils ucf unzip
Suggested packages:
  apt-config-icons isoquery libxml-parser-perl rng-tools libdata-dump-perl
  libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl
  libindirect-perl libmultidimensional-perl libbusiness-isbn-perl
  libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl
  binutils-multiarch libtext-template-perl zip
Recommended packages:
  gnupg libcgi-fast-perl libgpg-error-l10n libhtml-format-perl
  libio-compress-brotli-perl libldap-common liblist-someutils-xs-perl
  libfreezethaw-perl libmath-base85-perl libsocket6-perl
  libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl
  libdata-dump-perl libhttp-daemon-perl libmailtools-perl
  libxml-sax-expat-perl psmisc linux-sysctl-defaults
The following NEW packages will be installed:
  appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl
  libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl
  libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl
  libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl
  libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl
  libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl
  libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl
  libdevel-stacktrace-perl libdynaloader-functions-perl
  libemail-address-xs-perl libencode-locale-perl libexception-class-perl
  libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl
  libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libgpg-error0
  libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl
  libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl
  libhttp-cookies-perl libhttp-date-perl libhttp-message-perl
  libhttp-negotiate-perl libimport-into-perl libio-html-perl
  libio-interactive-perl libio-socket-ssl-perl libio-string-perl
  libipc-run3-perl libipc-system-simple-perl libiterator-perl
  libiterator-util-perl libjson-maybexs-perl libldap2 liblist-compare-perl
  liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl
  libmodule-implementation-perl libmodule-runtime-perl libmoo-perl
  libmoox-aliases-perl libmouse-perl libnamespace-clean-perl
  libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl
  libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14
  libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl
  libpackage-stash-perl libparams-classify-perl libparams-util-perl
  libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl
  libproc-processtable-perl libproc2-0 libpsl5t64 libregexp-wildcards-perl
  librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db
  libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl
  libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl
  libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
  libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl
  libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl
  libtext-levenshteinxs-perl libtext-markdown-discount-perl
  libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl
  libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl
  liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl
  libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl
  libyaml-0-2 libyaml-libyaml-perl lintian lzop openssl patchutils
  perl-openssl-defaults plzip procps
  sbuild-build-depends-lintian-dummy:riscv64 t1utils ucf unzip
0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded.
Need to get 16.5 MB of archives.
After this operation, 65.9 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B]
Get:2 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get:3 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get:4 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.4.1-1 [1427 kB]
Get:5 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20241223 [164 kB]
Get:6 http://localhost:3142/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get:7 http://localhost:3142/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get:8 http://localhost:3142/debian unstable/main amd64 ucf all 3.0051 [42.8 kB]
Get:9 http://localhost:3142/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get:10 http://localhost:3142/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get:11 http://localhost:3142/debian unstable/main amd64 libldap2 amd64 2.6.9+dfsg-2 [194 kB]
Get:12 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get:13 http://localhost:3142/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get:14 http://localhost:3142/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB]
Get:15 http://localhost:3142/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB]
Get:16 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get:17 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get:18 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get:19 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.13.0-1 [374 kB]
Get:20 http://localhost:3142/debian unstable/main amd64 libstemmer0d amd64 2.2.0-4+b2 [119 kB]
Get:21 http://localhost:3142/debian unstable/main amd64 libxmlb2 amd64 0.3.22-1 [63.1 kB]
Get:22 http://localhost:3142/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB]
Get:23 http://localhost:3142/debian unstable/main amd64 libappstream5 amd64 1.0.4-1 [225 kB]
Get:24 http://localhost:3142/debian unstable/main amd64 appstream amd64 1.0.4-1 [523 kB]
Get:25 http://localhost:3142/debian unstable/main amd64 diffstat amd64 1.67-1 [35.5 kB]
Get:26 http://localhost:3142/debian unstable/main amd64 libgpg-error0 amd64 1.51-4 [82.1 kB]
Get:27 http://localhost:3142/debian unstable/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB]
Get:28 http://localhost:3142/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get:29 http://localhost:3142/debian unstable/main amd64 gpgconf amd64 2.2.46-6 [122 kB]
Get:30 http://localhost:3142/debian unstable/main amd64 gpg amd64 2.2.46-6 [533 kB]
Get:31 http://localhost:3142/debian unstable/main amd64 iso-codes all 4.17.0-1 [3055 kB]
Get:32 http://localhost:3142/debian unstable/main amd64 libaliased-perl all 0.34-3 [13.5 kB]
Get:33 http://localhost:3142/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.41 [68.3 kB]
Get:34 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB]
Get:35 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get:36 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB]
Get:37 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB]
Get:38 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:39 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB]
Get:40 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get:41 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get:42 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB]
Get:43 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB]
Get:44 http://localhost:3142/debian unstable/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB]
Get:45 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.50-1 [24.6 kB]
Get:46 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get:47 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB]
Get:48 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB]
Get:49 http://localhost:3142/debian unstable/main amd64 libcgi-pm-perl all 4.67-1 [217 kB]
Get:50 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B]
Get:51 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB]
Get:52 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get:53 http://localhost:3142/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB]
Get:54 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB]
Get:55 http://localhost:3142/debian unstable/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB]
Get:56 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB]
Get:57 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB]
Get:58 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB]
Get:59 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB]
Get:60 http://localhost:3142/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B]
Get:61 http://localhost:3142/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.39-1 [130 kB]
Get:62 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB]
Get:63 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB]
Get:64 http://localhost:3142/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB]
Get:65 http://localhost:3142/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB]
Get:66 http://localhost:3142/debian unstable/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB]
Get:67 http://localhost:3142/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1+b4 [32.8 kB]
Get:68 http://localhost:3142/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB]
Get:69 http://localhost:3142/debian unstable/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB]
Get:70 http://localhost:3142/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB]
Get:71 http://localhost:3142/debian unstable/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB]
Get:72 http://localhost:3142/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b5 [98.1 kB]
Get:73 http://localhost:3142/debian unstable/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB]
Get:74 http://localhost:3142/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB]
Get:75 http://localhost:3142/debian unstable/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB]
Get:76 http://localhost:3142/debian unstable/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB]
Get:77 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get:78 http://localhost:3142/debian unstable/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB]
Get:79 http://localhost:3142/debian unstable/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB]
Get:80 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B]
Get:81 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B]
Get:82 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB]
Get:83 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get:84 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get:85 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get:86 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB]
Get:87 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB]
Get:88 http://localhost:3142/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB]
Get:89 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB]
Get:90 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get:91 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB]
Get:92 http://localhost:3142/debian unstable/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB]
Get:93 http://localhost:3142/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB]
Get:94 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB]
Get:95 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get:96 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get:97 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B]
Get:98 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB]
Get:99 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB]
Get:100 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB]
Get:101 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get:102 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:103 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.78-1 [183 kB]
Get:104 http://localhost:3142/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB]
Get:105 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get:106 http://localhost:3142/debian unstable/main amd64 libio-interactive-perl all 1.026-1 [11.7 kB]
Get:107 http://localhost:3142/debian unstable/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB]
Get:108 http://localhost:3142/debian unstable/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB]
Get:109 http://localhost:3142/debian unstable/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB]
Get:110 http://localhost:3142/debian unstable/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB]
Get:111 http://localhost:3142/debian unstable/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB]
Get:112 http://localhost:3142/debian unstable/main amd64 liblz1 amd64 1.15-3 [39.0 kB]
Get:113 http://localhost:3142/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB]
Get:114 http://localhost:3142/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2.1 [36.0 kB]
Get:115 http://localhost:3142/debian unstable/main amd64 libmldbm-perl all 2.05-4 [16.8 kB]
Get:116 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get:117 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get:118 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB]
Get:119 http://localhost:3142/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB]
Get:120 http://localhost:3142/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B]
Get:121 http://localhost:3142/debian unstable/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB]
Get:122 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB]
Get:123 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB]
Get:124 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB]
Get:125 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get:126 http://localhost:3142/debian unstable/main amd64 libpath-tiny-perl all 0.148-1 [56.7 kB]
Get:127 http://localhost:3142/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB]
Get:128 http://localhost:3142/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB]
Get:129 http://localhost:3142/debian unstable/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB]
Get:130 http://localhost:3142/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB]
Get:131 http://localhost:3142/debian unstable/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB]
Get:132 http://localhost:3142/debian unstable/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB]
Get:133 http://localhost:3142/debian unstable/main amd64 libsort-versions-perl all 1.62-3 [8928 B]
Get:134 http://localhost:3142/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.48-2 [65.7 kB]
Get:135 http://localhost:3142/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB]
Get:136 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB]
Get:137 http://localhost:3142/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B]
Get:138 http://localhost:3142/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.18-1 [13.1 kB]
Get:139 http://localhost:3142/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB]
Get:140 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB]
Get:141 http://localhost:3142/debian unstable/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB]
Get:142 http://localhost:3142/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-2+b3 [20.4 kB]
Get:143 http://localhost:3142/debian unstable/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB]
Get:144 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB]
Get:145 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB]
Get:146 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB]
Get:147 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b2 [314 kB]
Get:148 http://localhost:3142/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.903.0+ds-1 [35.4 kB]
Get:149 http://localhost:3142/debian unstable/main amd64 plzip amd64 1.12-3 [65.0 kB]
Get:150 http://localhost:3142/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB]
Get:151 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB]
Get:152 http://localhost:3142/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get:153 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-29 [173 kB]
Get:154 http://localhost:3142/debian unstable/main amd64 lintian all 2.122.0 [1063 kB]
Preconfiguring packages ...
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Selecting previously unselected package libproc2-0:amd64.
(Reading database ... 25991 files and directories currently installed.)
Preparing to unpack .../000-libproc2-0_2%3a4.0.4-7_amd64.deb ...
Unpacking libproc2-0:amd64 (2:4.0.4-7) ...
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Preparing to unpack .../001-procps_2%3a4.0.4-7_amd64.deb ...
Unpacking procps (2:4.0.4-7) ...
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Preparing to unpack .../002-openssl_3.4.1-1_amd64.deb ...
Unpacking openssl (3.4.1-1) ...
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Preparing to unpack .../003-ca-certificates_20241223_all.deb ...
Unpacking ca-certificates (20241223) ...
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Unpacking libtext-charwidth-perl:amd64 (0.04-11+b4) ...
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Unpacking libtext-wrapi18n-perl (0.06-10) ...
Selecting previously unselected package ucf.
Preparing to unpack .../006-ucf_3.0051_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0051) ...
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Preparing to unpack .../007-libsasl2-modules-db_2.1.28+dfsg1-9_amd64.deb ...
Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ...
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Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-9) ...
Selecting previously unselected package libldap2:amd64.
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Unpacking libldap2:amd64 (2.6.9+dfsg-2) ...
Selecting previously unselected package libnghttp2-14:amd64.
Preparing to unpack .../010-libnghttp2-14_1.64.0-1_amd64.deb ...
Unpacking libnghttp2-14:amd64 (1.64.0-1) ...
Selecting previously unselected package libnghttp3-9:amd64.
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Unpacking libnghttp3-9:amd64 (1.8.0-1) ...
Selecting previously unselected package libngtcp2-16:amd64.
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Unpacking libngtcp2-16:amd64 (1.11.0-1) ...
Selecting previously unselected package libngtcp2-crypto-gnutls8:amd64.
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Unpacking libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ...
Selecting previously unselected package libpsl5t64:amd64.
Preparing to unpack .../014-libpsl5t64_0.21.2-1.1+b1_amd64.deb ...
Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ...
Selecting previously unselected package librtmp1:amd64.
Preparing to unpack .../015-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ...
Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ...
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Setting up libapt-pkg-perl (0.1.41) ...
Setting up liblz1:amd64 (1.15-3) ...
Setting up libberkeleydb-perl:amd64 (0.66-1) ...
Setting up plzip (1.12-3) ...
update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode
update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode
update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode
Setting up libtext-charwidth-perl:amd64 (0.04-11+b4) ...
Setting up libunicode-utf8-perl (0.62-2+b3) ...
Setting up libmouse-perl:amd64 (2.5.11-1+b1) ...
Setting up libgpg-error0:amd64 (1.51-4) ...
Setting up libdata-messagepack-perl (1.02-1+b4) ...
Setting up libclass-inspector-perl (1.36-3) ...
Setting up libdynaloader-functions-perl (0.004-1) ...
Setting up libtext-glob-perl (0.11-3) ...
Setting up libclass-method-modifiers-perl (2.15-1) ...
Setting up liblist-compare-perl (0.55-2) ...
Setting up libclone-perl:amd64 (0.47-1+b1) ...
Setting up libyaml-0-2:amd64 (0.2.5-2) ...
Setting up libsub-identify-perl (0.14-3+b3) ...
Setting up libcpanel-json-xs-perl:amd64 (4.39-1) ...
Setting up libhtml-tagset-perl (3.24-1) ...
Setting up libxmlb2:amd64 (0.3.22-1) ...
Setting up libdevel-size-perl (0.84-1+b1) ...
Setting up unzip (6.0-29) ...
Setting up liblwp-mediatypes-perl (6.04-2) ...
Setting up libyaml-libyaml-perl (0.903.0+ds-1) ...
Setting up libio-interactive-perl (1.026-1) ...
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Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ...
Setting up libnghttp2-14:amd64 (1.64.0-1) ...
Setting up perl-openssl-defaults:amd64 (7+b2) ...
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Setting up libgcrypt20:amd64 (1.11.0-7) ...
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Setting up libtime-duration-perl (1.21-2) ...
Setting up libtext-xslate-perl:amd64 (3.5.9-2+b1) ...
Setting up libnghttp3-9:amd64 (1.8.0-1) ...
Setting up libsub-exporter-progressive-perl (0.001013-3) ...
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Setting up libfile-sharedir-perl (1.118-3) ...
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Setting up libngtcp2-16:amd64 (1.11.0-1) ...
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Setting up libssh2-1t64:amd64 (1.11.1-1) ...
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Setting up libperlio-gzip-perl (0.20-1+b4) ...
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Setting up libsereal-decoder-perl (5.004+ds-1+b3) ...
Setting up libmarkdown2:amd64 (2.2.7-2.1) ...
Setting up libldap2:amd64 (2.6.9+dfsg-2) ...
Setting up liburi-perl (5.30-1) ...
Setting up iso-codes (4.17.0-1) ...
Setting up libnet-ipv6addr-perl (1.02-1) ...
Setting up gpg (2.2.46-6) ...
Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ...
Setting up libdata-validate-ip-perl (0.31-1) ...
Setting up libemail-address-xs-perl (1.05-1+b4) ...
Setting up libnet-ssleay-perl:amd64 (1.94-3) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up libfile-basedir-perl (0.09-2) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up libcurl3t64-gnutls:amd64 (8.13.0-1) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libtext-markdown-discount-perl (0.18-1) ...
Setting up libappstream5:amd64 (1.0.4-1) ...
Setting up libexception-class-perl (1.45-1) ...
Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ...
Setting up ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
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Setting up libdata-validate-uri-perl (0.07-3) ...
Setting up libxs-parse-keyword-perl (0.48-2) ...
Setting up appstream (1.0.4-1) ...
✔ Metadata cache was updated successfully.
Setting up libdata-optlist-perl (0.114-1) ...
Setting up ucf (3.0051) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libsyntax-keyword-try-perl (0.30-1+b1) ...
Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ...
Setting up libio-socket-ssl-perl (2.089-1) ...
Setting up libsub-exporter-perl (0.990-1) ...
Setting up libhttp-message-perl (7.00-2) ...
Setting up libhtml-form-perl (6.12-1) ...
Setting up libiterator-perl (0.03+ds1-2) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up libiterator-util-perl (0.02+ds1-2) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libparams-classify-perl:amd64 (0.015-2+b4) ...
Setting up libcgi-pm-perl (4.67-1) ...
Setting up libxml-sax-perl (1.02+dfsg-4) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Setting up libconst-fast-perl (0.014-2) ...
Setting up libdata-dpath-perl (0.60-1) ...
Setting up libmodule-implementation-perl (0.09-2) ...
Setting up libpackage-stash-perl (0.40-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up liblist-someutils-perl (0.59-1) ...
Setting up libmoox-aliases-perl (0.001006-2) ...
Setting up libb-hooks-endofscope-perl (0.28-1) ...
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up libwww-perl (6.78-1) ...
Setting up libhtml-tokeparser-simple-perl (3.16-4) ...
Setting up libwww-mechanize-perl (2.19-1) ...
Setting up lintian (2.122.0) ...
Setting up sbuild-build-depends-lintian-dummy:riscv64 (0.invalid.0) ...
Processing triggers for libc-bin (2.41-6) ...
Processing triggers for man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
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Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Running lintian...

I: Lintian run was successful.

+------------------------------------------------------------------------------+
| Post Build                                                                   |
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+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
Build-Space: n/a
Build-Time: 224
Distribution: unstable
Foreign Architectures: riscv64
Host Architecture: riscv64
Install-Time: 25
Job: clustalx_2.1+lgpl-9
Lintian: pass
Machine Architecture: amd64
Package: clustalx
Package-Time: 259
Source-Version: 2.1+lgpl-9
Space: n/a
Status: successful
Version: 2.1+lgpl-9
--------------------------------------------------------------------------------
Finished at 2025-04-06T08:45:35Z
Build needed 00:04:19, no disk space