sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | comet-ms 2019015+cleaned1-3 (s390x) Sun, 23 Aug 2020 09:18:56 +0000 | +==============================================================================+ Package: comet-ms Version: 2019015+cleaned1-3 Source Version: 2019015+cleaned1-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-39297429-dd20-4f49-8d39-152787077c8a' with '<>' I: NOTICE: Log filtering will replace 'build/comet-ms-rpEDHV/resolver-m3HuNj' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-23-0800.35.pdiff [3354 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-23-0800.35.pdiff [5925 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-08-23-0800.35.pdiff [3354 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-08-23-0800.35.pdiff [5925 B] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x Packages [8031 kB] Fetched 8242 kB in 2s (5183 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'comet-ms' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/comet-ms.git Please use: git clone https://salsa.debian.org/debichem-team/comet-ms.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1387 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main comet-ms 2019015+cleaned1-3 (dsc) [2080 B] Get:2 http://debian.oregonstate.edu/debian unstable/main comet-ms 2019015+cleaned1-3 (tar) [1378 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main comet-ms 2019015+cleaned1-3 (diff) [6596 B] Fetched 1387 kB in 0s (43.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/comet-ms-rpEDHV/comet-ms-2019015+cleaned1' with '<>' I: NOTICE: Log filtering will replace 'build/comet-ms-rpEDHV' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libmstoolkit-dev (>= 82), libmstoolkit-dev (<< 83), docbook-to-man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libmstoolkit-dev (>= 82), libmstoolkit-dev (<< 83), docbook-to-man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [449 B] Get:5 copy:/<>/apt_archive ./ Packages [540 B] Fetched 1946 B in 0s (80.6 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1:s390x libexpat1-dev:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libglib2.0-0 libgomp1:s390x libgomp1-s390x-cross libicu67 libio-string-perl libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libmstoolkit-dev:s390x libmstoolkit82:s390x libosp5 libperl5.30 libpipeline1 libsigsegv2 libsqlite3-0:s390x libsqlite3-dev:s390x libstdc++-10-dev libstdc++-10-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db opensp perl perl-modules-5.30 po-debconf sensible-utils sgml-base sgml-data ucf xml-core zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make docbook-defguide docbook-dsssl docbook-xml psgml binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-s390x-linux-gnu gcc-10-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x glibc-doc manpages-dev:s390x gnupg git bzr sqlite3-doc:s390x libstdc++-10-doc libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser doc-base perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl sgml-base-doc perlsgml w3-recs libxml2-utils Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:s390x libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libexpat1:s390x libexpat1-dev:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libglib2.0-0 libgomp1:s390x libgomp1-s390x-cross libicu67 libio-string-perl libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1 libmstoolkit-dev:s390x libmstoolkit82:s390x libosp5 libperl5.30 libpipeline1 libsigsegv2 libsqlite3-0:s390x libsqlite3-dev:s390x libstdc++-10-dev libstdc++-10-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db opensp perl perl-modules-5.30 po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils sgml-base sgml-data ucf xml-core zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded. Need to get 94.9 MB of archives. After this operation, 395 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [960 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sgml-base all 1.30 [15.1 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main s390x gcc-10-base s390x 10.2.0-5 [198 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.3.0-17 [197 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-3 [801 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.35-2 [1976 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-5 [1736 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-5 [8660 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.1.0-1 [1644 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu-base amd64 10.2.0-3cross2 [198 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-s390x-linux-gnu amd64 10.2.0-3cross2 [6648 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:10.1.0-1 [16.8 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-3cross2 [195 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.31-1cross2 [1254 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-s390x-cross all 10.2.0-3cross2 [24.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 10.2.0-3cross2 [90.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 10.2.0-3cross2 [24.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 10.2.0-3cross2 [7940 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-s390x-cross all 10.2.0-3cross2 [293 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 10.2.0-3cross2 [441 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 10.2.0-3cross2 [125 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-s390x-cross all 10.2.0-3cross2 [661 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu amd64 10.2.0-3cross2 [13.0 MB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:10.1.0-1 [1464 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.7.6-1cross2 [1228 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.31-1cross2 [1990 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-s390x-cross all 10.2.0-3cross2 [1676 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-s390x-linux-gnu amd64 10.2.0-3cross2 [7307 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:10.1.0-1 [1180 B] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.8 [6636 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2 [187 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.180-1+b1 [165 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.4-1 [1341 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2 [1007 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 xml-core all 0.18+nmu1 [23.8 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 sgml-data all 2.0.11 [179 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 docbook all 4.5-6 [129 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libosp5 amd64 1.5.2-13+b1 [948 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 opensp amd64 1.5.2-13+b1 [449 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 docbook-to-man amd64 1:2.0.0-43 [39.6 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-s1 s390x 10.2.0-5 [24.6 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt1 s390x 1:4.4.16-1 [89.0 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.31-3 [2471 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.3.0-17 [345 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 10.2.0-5 [8100 B] Get:98 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.7.10-1 [1141 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt-dev s390x 1:4.4.16-1 [107 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.31-3 [2018 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main s390x libexpat1 s390x 2.2.9-1 [89.4 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main s390x libexpat1-dev s390x 2.2.9-1 [134 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 10.2.0-5 [92.5 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 10.2.0-5 [25.3 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 10.2.0-5 [482 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 10.2.0-5 [125 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.3.0-17 [681 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main s390x libsqlite3-0 s390x 3.33.0-1 [741 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g s390x 1:1.2.11.dfsg-2 [88.9 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main s390x libmstoolkit82 s390x 82-7 [125 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2 [189 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main s390x libsqlite3-dev s390x 3.33.0-1 [904 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main s390x libmstoolkit-dev s390x 82-7 [130 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.3.0-17 [1664 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 94.9 MB in 1s (67.6 MB/s) Selecting previously unselected package bsdextrautils. 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Unpacking libsqlite3-dev:s390x (3.33.0-1) ... Selecting previously unselected package libmstoolkit-dev:s390x. Preparing to unpack .../111-libmstoolkit-dev_82-7_s390x.deb ... Unpacking libmstoolkit-dev:s390x (82-7) ... Selecting previously unselected package libstdc++-9-dev:s390x. Preparing to unpack .../112-libstdc++-9-dev_9.3.0-17_s390x.deb ... Unpacking libstdc++-9-dev:s390x (9.3.0-17) ... Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../113-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up binutils-s390x-linux-gnu (2.35-2) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up bsdextrautils (2.36-2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.64.4-1) ... No schema files found: doing nothing. Setting up libc6-s390x-cross (2.31-1cross2) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:s390x (5.7.10-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up libosp5 (1.5.2-13+b1) ... Setting up gcc-10-base:s390x (10.2.0-5) ... Setting up autotools-dev (20180224.1) ... Setting up linux-libc-dev-s390x-cross (5.7.6-1cross2) ... Setting up cross-config (2.6.15-3.1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-10-cross-base (10.2.0-3cross2) ... Setting up libitm1-s390x-cross (10.2.0-3cross2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libc6-dev-s390x-cross (2.31-1cross2) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-3) ... Setting up sgml-base (1.30) ... Setting up libelf1:amd64 (0.180-1+b1) ... Setting up libgomp1-s390x-cross (10.2.0-3cross2) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up gcc-10-s390x-linux-gnu-base:amd64 (10.2.0-3cross2) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:s390x (9.3.0-17) ... Setting up libstdc++-10-dev:amd64 (10.2.0-5) ... Setting up g++-10 (10.2.0-5) ... Setting up libtool (2.4.6-14) ... Setting up libatomic1-s390x-cross (10.2.0-3cross2) ... Setting up m4 (1.4.18-4) ... Setting up opensp (1.5.2-13+b1) ... Setting up perl (5.30.3-4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libgcc-s1-s390x-cross (10.2.0-3cross2) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.1.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up xml-core (0.18+nmu1) ... Setting up cpp-10-s390x-linux-gnu (10.2.0-3cross2) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up cpp-s390x-linux-gnu (4:10.1.0-1) ... Setting up libstdc++6-s390x-cross (10.2.0-3cross2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up libasan6-s390x-cross (10.2.0-3cross2) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libubsan1-s390x-cross (10.2.0-3cross2) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-10-dev-s390x-cross (10.2.0-3cross2) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libstdc++-10-dev-s390x-cross (10.2.0-3cross2) ... Setting up gcc-10-s390x-linux-gnu (10.2.0-3cross2) ... Setting up gcc-s390x-linux-gnu (4:10.1.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-10-s390x-linux-gnu (10.2.0-3cross2) ... Setting up g++-s390x-linux-gnu (4:10.1.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-s390x (12.8) ... Setting up libcrypt1:s390x (1:4.4.16-1) ... Setting up libgcc-s1:s390x (10.2.0-5) ... Setting up libc6:s390x (2.31-3) ... Setting up libcrypt-dev:s390x (1:4.4.16-1) ... Setting up libc6-dev:s390x (2.31-3) ... Setting up libstdc++6:s390x (10.2.0-5) ... Setting up libitm1:s390x (10.2.0-5) ... Setting up libexpat1:s390x (2.2.9-1) ... Setting up libsqlite3-0:s390x (3.33.0-1) ... Setting up debhelper (13.2) ... Setting up zlib1g:s390x (1:1.2.11.dfsg-2) ... Setting up libgomp1:s390x (10.2.0-5) ... Setting up dh-autoreconf (19) ... Setting up libasan5:s390x (9.3.0-17) ... Setting up libexpat1-dev:s390x (2.2.9-1) ... Setting up libsqlite3-dev:s390x (3.33.0-1) ... Setting up libatomic1:s390x (10.2.0-5) ... Setting up libubsan1:s390x (10.2.0-5) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2) ... Setting up libmstoolkit82:s390x (82-7) ... Setting up libgcc-9-dev:s390x (9.3.0-17) ... Setting up libmstoolkit-dev:s390x (82-7) ... Setting up libstdc++-9-dev:s390x (9.3.0-17) ... Processing triggers for libc-bin (2.31-3) ... Processing triggers for sgml-base (1.30) ... Setting up sgml-data (2.0.11) ... Processing triggers for sgml-base (1.30) ... Setting up docbook (4.5-6) ... Processing triggers for sgml-base (1.30) ... Setting up docbook-to-man (1:2.0.0-43) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) amd64 (x86_64) Toolchain package versions: binutils_2.35-2 dpkg-dev_1.20.5 g++-10_10.2.0-5 gcc-10_10.2.0-5 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-5 libstdc++-10-dev-s390x-cross_10.2.0-3cross2 libstdc++-9-dev_9.3.0-17 libstdc++6_10.2.0-5 libstdc++6-s390x-cross_10.2.0-3cross2 linux-libc-dev_5.7.10-1 Package versions: adduser_3.118 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 binutils_2.35-2 binutils-common_2.35-2 binutils-s390x-linux-gnu_2.35-2 binutils-x86-64-linux-gnu_2.35-2 bsdextrautils_2.36-2 bsdutils_1:2.36-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-3 cpp_4:10.1.0-1 cpp-10_10.2.0-5 cpp-10-s390x-linux-gnu_10.2.0-3cross2 cpp-8_8.4.0-4 cpp-s390x-linux-gnu_4:10.1.0-1 cross-config_2.6.15-3.1 crossbuild-essential-s390x_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debian-archive-keyring_2019.1 debianutils_4.11.1 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 docbook_4.5-6 docbook-to-man_1:2.0.0-43 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.36-2 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.1.0-1 g++-10_10.2.0-5 g++-10-s390x-linux-gnu_10.2.0-3cross2 g++-s390x-linux-gnu_4:10.1.0-1 gcc_4:10.1.0-1 gcc-10_10.2.0-5 gcc-10-base_10.2.0-5 gcc-10-cross-base_10.2.0-3cross2 gcc-10-s390x-linux-gnu_10.2.0-3cross2 gcc-10-s390x-linux-gnu-base_10.2.0-3cross2 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-17 gcc-s390x-linux-gnu_4:10.1.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libasan5_9.3.0-17 libasan6_10.2.0-5 libasan6-s390x-cross_10.2.0-3cross2 libatomic1_10.2.0-5 libatomic1-s390x-cross_10.2.0-3cross2 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.35-2 libblkid1_2.36-2 libbz2-1.0_1.0.8-4 libc-bin_2.31-3 libc-dev-bin_2.31-3 libc6_2.31-3 libc6-dev_2.31-3 libc6-dev-s390x-cross_2.31-1cross2 libc6-s390x-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-5 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.35-2 libctf0_2.35-2 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: comet-ms Binary: comet-ms Architecture: any Version: 2019015+cleaned1-3 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: http://comet-ms.sourceforge.net Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/debichem-team/comet-ms Vcs-Git: https://salsa.debian.org/debichem-team/comet-ms.git Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libmstoolkit-dev (>= 82), libmstoolkit-dev (<< 83), docbook-to-man Package-List: comet-ms deb science optional arch=any Checksums-Sha1: e8ce6f80224671a82f5c9123546c621fba5df7d0 1378100 comet-ms_2019015+cleaned1.orig.tar.gz f95389963663df225018034939d6e4249900b1f4 6596 comet-ms_2019015+cleaned1-3.debian.tar.xz Checksums-Sha256: 27a5c4b89b82d4570485cca98b27a45dd55a640ea297d8188c1c008a6b5234a3 1378100 comet-ms_2019015+cleaned1.orig.tar.gz ed6aa53d308ca0be660491d05d96f493c61778ebb5c6585e68d1182b0d9fb1d2 6596 comet-ms_2019015+cleaned1-3.debian.tar.xz Files: fac4a9263c2b124cb0183dc9bf645f4b 1378100 comet-ms_2019015+cleaned1.orig.tar.gz be62061e3694af78e5393053735248c2 6596 comet-ms_2019015+cleaned1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEsFMwThfW1Bndm0ZRQatITXaUz0IFAl81tjgACgkQQatITXaU z0IY8A/+PswAVKpaF5KgR2adBwgnBdUOTuQOLDteuqq058yxKxuaDJ0sPGOQO0/r Vv+oHUO688tRZv2cDJyUfqXz1qzEVD5K5S3H1PXxS6pwxp1q2xOmJUFdpNTY9aTR l6068uHT5FMEwcSL+8ypbuAtk1OEriz/HIHMrMsvh5YkxgMMYngHzfKdpArXcjzp Pdb1X9REGA4g90PI1cu27A7FlP/z2RyRymzkq7dfu47SOcCYWGihGloWqzj7qD6s hLfqlE9iTAr5J2j7uxXYGzHAjfzw8KJpYMDcKxN6gioOuGSQ+dmnjWtNv4cxkpJ1 KtlDj8pAU6UFDG2vzZWhbcihnIlkKfsV7L5Ot0Xv11gdNIgu+JwlIV6SwAcjYXnj 2nnaBr3Q55QY0YOj23ccHIxDWBj9RGC6/oIbI668LBXbHByFzeU5t2bse1Z4L5z0 xaOKNhI7vX6vZQmgg9Xakm23d+Fj+QLDj8oB6L62xPif++hUHfQpfYHOXv1YT2gv eOqh3n69p2HlZbmRVq91H6vkimCKH/3YyFR3hmZ2b55uCxnWZ+OTgHAoBVq6qgF/ 355s2TQdMxUWzsOuMmyDqfT2eWpJ2aniRFbb0lae+Y54/SZ309sX/fkNPa11SFLA iXT4DTLogmNkT7dPuODjwNjS6YH6BPqpwFYo5lZWLwJTuUTSFmc= =gvnA -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.I_3xuMdZ/trustedkeys.kbx': General error gpgv: Signature made Thu Aug 13 21:52:56 2020 UTC gpgv: using RSA key B053304E17D6D419DD9B465141AB484D7694CF42 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./comet-ms_2019015+cleaned1-3.dsc dpkg-source: info: extracting comet-ms in /<> dpkg-source: info: unpacking comet-ms_2019015+cleaned1.orig.tar.gz dpkg-source: info: unpacking comet-ms_2019015+cleaned1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile-to-handle-lib-debian-way-of-doing-things.patch dpkg-source: info: applying cometsearch-makefile-to-handle-lib-debian-way-of-doing-things.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-39297429-dd20-4f49-8d39-152787077c8a SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package comet-ms dpkg-buildpackage: info: source version 2019015+cleaned1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f debian/comet-ms.1 make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/comet-ms.substvars debian/files rm -fr -- debian/comet-ms/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' docbook-to-man debian/comet-ms.sgml > debian/comet-ms.1 /usr/bin/docbook-to-man: 68: /usr/bin/instant: not found dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc make[2]: Entering directory '/<>' cd CometSearch ; make make[3]: Entering directory '/<>/CometSearch' s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit Threading.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometInterfaces.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometSearch.cpp -c In file included from CometSearch.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = SearchThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = SearchThreadData*; ThreadPool::ThreadProc = void (*)(SearchThreadData*)]’ CometSearch.cpp:138:66: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch.h:21, from CometSearch.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometPreprocess.cpp -c In file included from CometPreprocess.h:21, from CometPreprocess.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PreprocessThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PreprocessThreadData*; ThreadPool::ThreadProc = void (*)(PreprocessThreadData*)]’ CometPreprocess.cpp:74:65: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometPostAnalysis.cpp -c In file included from CometPostAnalysis.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PostAnalysisThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PostAnalysisThreadData*; ThreadPool::ThreadProc = void (*)(PostAnalysisThreadData*)]’ CometPostAnalysis.cpp:46:38: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometPostAnalysis.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Val_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1832:15: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Val_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1832:15, inlined from ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1854:36: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometMassSpecUtils.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteOut.cpp -c CometWriteOut.cpp: In static member function ‘static bool CometWriteOut::PrintResults(int, bool, FILE*)’: CometWriteOut.cpp:124:32: warning: ‘%.5d’ directive writing between 5 and 11 bytes into a region of size between 0 and 1022 [-Wformat-overflow=] 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ^~~~ CometWriteOut.cpp:124:14: note: ‘sprintf’ output between 20 and 1064 bytes into a destination of size 1024 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | g_staticParams.inputFile.szBaseName, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | pStr, | ~~~~~ 127 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | pQuery->_spectrumInfoInternal.iChargeState); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:115:35: warning: ‘%s’ directive writing up to 511 bytes into a region of size between 506 and 1017 [-Wformat-overflow=] 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ^~ CometWriteOut.cpp:115:14: note: ‘sprintf’ output between 26 and 1070 bytes into a destination of size 1024 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 | g_staticParams.inputFile.szBaseName, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 | pStr, | ~~~~~ 118 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 | pQuery->_spectrumInfoInternal.iChargeState); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:273:28: warning: ‘%+d’ directive writing between 2 and 11 bytes into a region of size 9 [-Wformat-overflow=] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~ CometWriteOut.cpp:273:26: note: directive argument in the range [1, 2147483647] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~~~~ CometWriteOut.cpp:273:14: note: ‘sprintf’ output between 4 and 13 bytes into a destination of size 10 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:151:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 226 [-Wformat-overflow=] 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ^~ ~~~~~~~~ CometWriteOut.cpp:151:14: note: ‘sprintf’ output between 33 and 1056 bytes into a destination of size 256 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteSqt.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWritePepXML.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWritePercolator.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteTxt.cpp -c s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometSearchManager.cpp -c In file included from CometSearch.h:21, from CometSearchManager.cpp:19: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearchManager.cpp: In static member function ‘static bool CometSearchManager::WriteIndexedDatabase()’: CometSearchManager.cpp:2756:28: warning: ‘.idx’ directive writing 4 bytes into a region of size between 1 and 512 [-Wformat-overflow=] 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ^~~~ CometSearchManager.cpp:2756:11: note: ‘sprintf’ output between 5 and 516 bytes into a destination of size 512 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp: In member function ‘virtual bool CometSearchManager::DoSearch()’: CometSearchManager.cpp:416:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~ CometSearchManager.cpp:416:26: note: directive argument in the range [1, 2147483647] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~~~~~~~~~~ CometSearchManager.cpp:416:14: note: ‘sprintf’ output between 9 and 18 bytes into a destination of size 16 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1597:71: warning: ‘%s’ directive writing up to 511 bytes into a region of size 218 [-Wformat-overflow=] 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ^~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1597:17: note: ‘sprintf’ output between 42 and 553 bytes into a destination of size 256 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:223:73: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 987 [-Wformat-overflow=] 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ^~ ~~~~~~~~~~ CometSearchManager.cpp:223:20: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 1024 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1700:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ^~ ~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1700:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1675:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ^~ ~~~~~~~~~~~ CometSearchManager.cpp:1675:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1763:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ^~ ~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1763:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1737:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ^~ ~~~~~~~~~~~ CometSearchManager.cpp:1737:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1826:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ^~ ~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1826:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1800:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ^~ ~~~~~~~~~~~~~~ CometSearchManager.cpp:1800:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1854:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ^~ ~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1854:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1975:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 128 [-Wformat-overflow=] 1975 | sprintf(szOut, "%s", szStatusMsg); | ^~ ~~~~~~~~~~~ CometSearchManager.cpp:1975:23: note: ‘sprintf’ output between 1 and 256 bytes into a destination of size 128 1975 | sprintf(szOut, "%s", szStatusMsg); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometCheckForUpdates.cpp -c CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::SendAnalyticsHit()’: CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ CometCheckForUpdates.cpp:156:12: note: ‘snprintf’ output between 129 and 1155 bytes into a destination of size 1024 156 | snprintf(message, 1024, | ~~~~~~~~^~~~~~~~~~~~~~~ 157 | "POST /collect HTTP/1.1\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | "Host: %s\r\n" | ~~~~~~~~~~~~~~ 159 | "Content-type: application/x-www-form-urlencoded\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | "Content-length: %d\r\n\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | "%s\r\n", host, (int)strlen(postData), postData); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ar rcs libcometsearch.a Threading.o CometInterfaces.o CometSearch.o CometPreprocess.o CometPostAnalysis.o CometMassSpecUtils.o CometWriteOut.o CometWriteSqt.o CometWritePepXML.o CometWritePercolator.o CometWriteTxt.o CometSearchManager.o CometCheckForUpdates.o make[3]: Leaving directory '/<>/CometSearch' s390x-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch CometSearch/CometCheckForUpdates.cpp CometSearch/CometMassSpecUtils.cpp CometSearch/CometPreprocess.cpp CometSearch/CometSearchManager.cpp CometSearch/CometWritePepXML.cpp CometSearch/CometWriteSqt.cpp CometSearch/Threading.cpp CometSearch/CometInterfaces.cpp CometSearch/CometPostAnalysis.cpp CometSearch/CometSearch.cpp CometSearch/CometWriteOut.cpp CometSearch/CometWritePercolator.cpp CometSearch/CometWriteTxt.cpp Comet.cpp -c CometSearch/CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::SendAnalyticsHit()’: CometSearch/CometCheckForUpdates.cpp:146:17: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 146 | char *host = "www.google-analytics.com"; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ CometSearch/CometCheckForUpdates.cpp:156:12: note: ‘snprintf’ output between 129 and 1155 bytes into a destination of size 1024 156 | snprintf(message, 1024, | ~~~~~~~~^~~~~~~~~~~~~~~ 157 | "POST /collect HTTP/1.1\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | "Host: %s\r\n" | ~~~~~~~~~~~~~~ 159 | "Content-type: application/x-www-form-urlencoded\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | "Content-length: %d\r\n\r\n" | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | "%s\r\n", host, (int)strlen(postData), postData); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPreprocess.h:21, from CometSearch/CometPreprocess.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PreprocessThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PreprocessThreadData*; ThreadPool::ThreadProc = void (*)(PreprocessThreadData*)]’ CometSearch/CometPreprocess.cpp:74:65: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometSearch.h:21, from CometSearch/CometSearchManager.cpp:19: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometSearchManager.cpp: In static member function ‘static bool CometSearchManager::WriteIndexedDatabase()’: CometSearch/CometSearchManager.cpp:2756:28: warning: ‘.idx’ directive writing 4 bytes into a region of size between 1 and 512 [-Wformat-overflow=] 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ^~~~ CometSearch/CometSearchManager.cpp:2756:11: note: ‘sprintf’ output between 5 and 516 bytes into a destination of size 512 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp: In member function ‘virtual bool CometSearchManager::DoSearch()’: CometSearch/CometSearchManager.cpp:416:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~ CometSearch/CometSearchManager.cpp:416:26: note: directive argument in the range [1, 2147483647] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~~~~~~~~~~ CometSearch/CometSearchManager.cpp:416:14: note: ‘sprintf’ output between 9 and 18 bytes into a destination of size 16 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1597:71: warning: ‘%s’ directive writing up to 511 bytes into a region of size 218 [-Wformat-overflow=] 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ^~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1597:17: note: ‘sprintf’ output between 42 and 553 bytes into a destination of size 256 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:223:73: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 987 [-Wformat-overflow=] 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ^~ ~~~~~~~~~~ CometSearch/CometSearchManager.cpp:223:20: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 1024 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1700:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ^~ ~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1700:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1675:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ^~ ~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1675:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1763:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ^~ ~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1763:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1737:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ^~ ~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1737:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1826:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ^~ ~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1826:23: note: ‘sprintf’ output between 41 and 1064 bytes into a destination of size 256 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1800:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ^~ ~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1800:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1854:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ^~ ~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1854:20: note: ‘sprintf’ output between 35 and 1058 bytes into a destination of size 256 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1975:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 128 [-Wformat-overflow=] 1975 | sprintf(szOut, "%s", szStatusMsg); | ^~ ~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1975:23: note: ‘sprintf’ output between 1 and 256 bytes into a destination of size 128 1975 | sprintf(szOut, "%s", szStatusMsg); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp: In static member function ‘static void CometWritePepXML::ReadInstrument(char*, char*)’: CometSearch/CometWritePepXML.cpp:910:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 910 | GetVal(szMsInstrumentElement, "\"msModel\" value", szModel); | ^~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp:911:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 911 | GetVal(szMsInstrumentElement, "\"msManufacturer\" value", szManufacturer); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPostAnalysis.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PostAnalysisThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PostAnalysisThreadData*; ThreadPool::ThreadProc = void (*)(PostAnalysisThreadData*)]’ CometSearch/CometPostAnalysis.cpp:46:38: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPostAnalysis.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Val_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1832:15: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Val_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1832:15, inlined from ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = Results*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_algo.h:1854:36: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In file included from CometSearch/CometSearch.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = SearchThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = SearchThreadData*; ThreadPool::ThreadProc = void (*)(SearchThreadData*)]’ CometSearch/CometSearch.cpp:138:66: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometSearch.h:21, from CometSearch/CometSearch.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_val]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:145:32, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/s390x-linux-gnu/include/c++/10/bits/stl_heap.h:246:23: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometWriteOut.cpp: In static member function ‘static bool CometWriteOut::PrintResults(int, bool, FILE*)’: CometSearch/CometWriteOut.cpp:124:32: warning: ‘%.5d’ directive writing between 5 and 11 bytes into a region of size between 0 and 1022 [-Wformat-overflow=] 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ^~~~ CometSearch/CometWriteOut.cpp:124:14: note: ‘sprintf’ output between 20 and 1064 bytes into a destination of size 1024 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | g_staticParams.inputFile.szBaseName, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | pStr, | ~~~~~ 127 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | pQuery->_spectrumInfoInternal.iChargeState); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:115:35: warning: ‘%s’ directive writing up to 511 bytes into a region of size between 506 and 1017 [-Wformat-overflow=] 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ^~ CometSearch/CometWriteOut.cpp:115:14: note: ‘sprintf’ output between 26 and 1070 bytes into a destination of size 1024 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 | g_staticParams.inputFile.szBaseName, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 | pStr, | ~~~~~ 118 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 | pQuery->_spectrumInfoInternal.iScanNumber, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 | pQuery->_spectrumInfoInternal.iChargeState); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:273:28: warning: ‘%+d’ directive writing between 2 and 11 bytes into a region of size 9 [-Wformat-overflow=] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~ CometSearch/CometWriteOut.cpp:273:26: note: directive argument in the range [1, 2147483647] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~~~~ CometSearch/CometWriteOut.cpp:273:14: note: ‘sprintf’ output between 4 and 13 bytes into a destination of size 10 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:151:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 226 [-Wformat-overflow=] 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ^~ ~~~~~~~~ CometSearch/CometWriteOut.cpp:151:14: note: ‘sprintf’ output between 33 and 1056 bytes into a destination of size 256 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd CometSearch ; make make[3]: Entering directory '/<>/CometSearch' ar rcs libcometsearch.a Threading.o CometInterfaces.o CometSearch.o CometPreprocess.o CometPostAnalysis.o CometMassSpecUtils.o CometWriteOut.o CometWriteSqt.o CometWritePepXML.o CometWritePercolator.o CometWriteTxt.o CometSearchManager.o CometCheckForUpdates.o make[3]: Leaving directory '/<>/CometSearch' s390x-linux-gnu-g++ Comet.o CometSearch/CometCheckForUpdates.o CometSearch/CometMassSpecUtils.o CometSearch/CometPreprocess.o CometSearch/CometSearchManager.o CometSearch/CometWritePepXML.o CometSearch/CometWriteSqt.o CometSearch/Threading.o CometSearch/CometInterfaces.o CometSearch/CometPostAnalysis.o CometSearch/CometSearch.o CometSearch/CometWriteOut.o CometSearch/CometWritePercolator.o CometSearch/CometWriteTxt.o -o comet-ms -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -L/usr/lib -lmstoolkitlite -lm -lpthread make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a rm -f -- debian/comet-ms.substvars rm -fr -- debian/.debhelper/generated/comet-ms/ debian/comet-ms/ debian/tmp/ dh_installdirs -a install -d debian/comet-ms/usr/bin dh_auto_install -a dh_install -a cp --reflink=auto -a ./comet-ms debian/comet-ms/usr/bin/ install -d debian/.debhelper/generated/comet-ms dh_installdocs -a install -d debian/comet-ms/usr/share/doc/comet-ms install -p -m0644 debian/copyright debian/comet-ms/usr/share/doc/comet-ms/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/comet-ms/usr/share/doc/comet-ms/changelog.Debian dh_installman -a install -d debian/comet-ms/usr/share/man/man1/ install -p -m0644 ./debian/comet-ms.1 debian/comet-ms/usr/share/man/man1/comet-ms.1 man-recode --to-code UTF-8 --suffix .dh-new debian/comet-ms/usr/share/man/man1/comet-ms.1 mv debian/comet-ms/usr/share/man/man1/comet-ms.1.dh-new debian/comet-ms/usr/share/man/man1/comet-ms.1 chmod 0644 -- debian/comet-ms/usr/share/man/man1/comet-ms.1 dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/comet-ms chmod a-x usr/share/doc/comet-ms/changelog.Debian usr/share/man/man1/comet-ms.1 gzip -9nf usr/share/doc/comet-ms/changelog.Debian usr/share/man/man1/comet-ms.1 cd '/<>' dh_fixperms -a find debian/comet-ms -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/comet-ms ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/comet-ms/usr/share/doc -type f -a -true -a ! -regex 'debian/comet-ms/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/comet-ms/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a dwz -- debian/comet-ms/usr/bin/comet-ms dh_strip -a install -d debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/4c s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/comet-ms/usr/bin/comet-ms debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/4c/48ee5257d57700abdd4dd02a1253e1a8ce6600.debug chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/4c/48ee5257d57700abdd4dd02a1253e1a8ce6600.debug chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/4c/48ee5257d57700abdd4dd02a1253e1a8ce6600.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/comet-ms/usr/bin/comet-ms s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/4c/48ee5257d57700abdd4dd02a1253e1a8ce6600.debug debian/comet-ms/usr/bin/comet-ms install -d debian/.debhelper/comet-ms/dbgsym-root/usr/share/doc ln -s comet-ms debian/.debhelper/comet-ms/dbgsym-root/usr/share/doc/comet-ms-dbgsym dh_makeshlibs -a rm -f debian/comet-ms/DEBIAN/shlibs dh_shlibdeps -a install -d debian/comet-ms/DEBIAN dpkg-shlibdeps -Tdebian/comet-ms.substvars debian/comet-ms/usr/bin/comet-ms dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/comet-ms.substvars echo misc:Pre-Depends= >> debian/comet-ms.substvars install -d debian/.debhelper/comet-ms/dbgsym-root/DEBIAN dpkg-gencontrol -pcomet-ms -ldebian/changelog -Tdebian/comet-ms.substvars -Pdebian/.debhelper/comet-ms/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=comet-ms-dbgsym "-DDepends=comet-ms (= \${binary:Version})" "-DDescription=debug symbols for comet-ms" -DBuild-Ids=4c48ee5257d57700abdd4dd02a1253e1a8ce6600 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcomet-ms -ldebian/changelog -Tdebian/comet-ms.substvars -Pdebian/comet-ms chmod 0644 -- debian/comet-ms/DEBIAN/control chown 0:0 -- debian/comet-ms/DEBIAN/control dh_md5sums -a cd debian/comet-ms >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/comet-ms/DEBIAN/md5sums chown 0:0 -- debian/comet-ms/DEBIAN/md5sums cd debian/.debhelper/comet-ms/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/comet-ms .. dpkg-deb: building package 'comet-ms' in '../comet-ms_2019015+cleaned1-3_s390x.deb'. dpkg-deb --build debian/.debhelper/comet-ms/dbgsym-root .. dpkg-deb: building package 'comet-ms-dbgsym' in '../comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../comet-ms_2019015+cleaned1-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-08-23T09:26:44Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ comet-ms_2019015+cleaned1-3_s390x.changes: ------------------------------------------ Format: 1.8 Date: Thu, 13 Aug 2020 23:49:04 +0200 Source: comet-ms Binary: comet-ms comet-ms-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 2019015+cleaned1-3 Distribution: unstable Urgency: low Maintainer: The Debichem Group Changed-By: Filippo Rusconi Description: comet-ms - Tandem mass spectrometry (MS/MS) search engine Closes: 929760 Changes: comet-ms (2019015+cleaned1-3) unstable; urgency=low . * d/rules: Fix problem with invoking 'make' for building the software. Replace with dh_auto_build (thanks to Helmut Grohne for the report and the patch; Closes: #929760) Checksums-Sha1: f837f5716c5cc4c4c23000ca89dfa4953eacb61e 1793356 comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb c1464654e1522fcc006651bd3281f08a990522d0 4957 comet-ms_2019015+cleaned1-3_s390x.buildinfo 14ccc23037ff0a565e3ce543c08b12139a7bd36c 787408 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha256: 6e319749a4f5002798ee20b71c89e5b072c78e56583531b28ec9a1ac60cc6397 1793356 comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb 89f6e0e8f0611bfc50f00a00e039f54dd0b09bf15d1e007b72a478ff1d6c234a 4957 comet-ms_2019015+cleaned1-3_s390x.buildinfo f92fd9a32800a9838d70e19100bed87b48a77eda4b21e5b3d610a6d7acc21ff7 787408 comet-ms_2019015+cleaned1-3_s390x.deb Files: 4a4ae3eec78fda75de5e7186498af8b4 1793356 debug optional comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb 5ff1ac56d0851e98174d6c57cd53482d 4957 science optional comet-ms_2019015+cleaned1-3_s390x.buildinfo 6375978f6782aa506fee5f6ecac7392c 787408 science optional comet-ms_2019015+cleaned1-3_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: comet-ms Binary: comet-ms comet-ms-dbgsym Architecture: s390x Version: 2019015+cleaned1-3 Checksums-Md5: 4a4ae3eec78fda75de5e7186498af8b4 1793356 comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb 6375978f6782aa506fee5f6ecac7392c 787408 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha1: f837f5716c5cc4c4c23000ca89dfa4953eacb61e 1793356 comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb 14ccc23037ff0a565e3ce543c08b12139a7bd36c 787408 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha256: 6e319749a4f5002798ee20b71c89e5b072c78e56583531b28ec9a1ac60cc6397 1793356 comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb f92fd9a32800a9838d70e19100bed87b48a77eda4b21e5b3d610a6d7acc21ff7 787408 comet-ms_2019015+cleaned1-3_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 23 Aug 2020 09:26:44 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-3), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-7), binutils (= 2.35-2), binutils-common (= 2.35-2), binutils-x86-64-linux-gnu (= 2.35-2), bsdextrautils (= 2.36-2), bsdutils (= 1:2.36-2), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-3), cpp (= 4:10.1.0-1), cpp-10 (= 10.2.0-5), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2), debianutils (= 4.11.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), docbook (= 4.5-6), docbook-to-man (= 1:2.0.0-43), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:10.1.0-1), g++-10 (= 10.2.0-5), gcc (= 4:10.1.0-1), gcc-10 (= 10.2.0-5), gcc-10-base (= 10.2.0-5), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-5), libatomic1 (= 10.2.0-5), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.35-2), libblkid1 (= 2.36-2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-3), libc-dev-bin (= 2.31-3), libc6 (= 2.31-3), libc6-dev (= 2.31-3), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-5), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.35-2), libctf0 (= 2.35-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.253), libdebhelper-perl (= 13.2), libdpkg-perl (= 1.20.5), libelf1 (= 0.180-1+b1), libexpat1 (= 2.2.9-1), libexpat1-dev (= 2.2.9-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-5), libgcc-s1 (= 10.2.0-5), libgcrypt20 (= 1.8.6-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.64.4-1), libgmp10 (= 2:6.2.0+dfsg-6), libgomp1 (= 10.2.0-5), libgpg-error0 (= 1.38-2), libicu67 (= 67.1-4), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-5), liblsan0 (= 10.2.0-5), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-2), libmpc3 (= 1.2.0~rc1-1), libmpfr6 (= 4.1.0-3), libmstoolkit-dev (= 82-7), libmstoolkit82 (= 82-7), libosp5 (= 1.5.2-13+b1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-5), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-2), libsqlite3-0 (= 3.33.0-1), libsqlite3-dev (= 3.33.0-1), libstdc++-10-dev (= 10.2.0-5), libstdc++6 (= 10.2.0-5), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.2-1), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-5), libubsan1 (= 10.2.0-5), libuchardet0 (= 0.0.7-1), libudev1 (= 246.2-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-2), libxml2 (= 2.9.10+dfsg-5+b1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.7.10-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), opensp (= 1.5.2-13+b1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sgml-base (= 1.30), sgml-data (= 2.0.11), sysvinit-utils (= 2.96-4), tar (= 1.30+dfsg-7), util-linux (= 2.36-2), xml-core (= 0.18+nmu1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1597355344" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb -------------------------------------------- new Debian package, version 2.0. size 1793356 bytes: control archive=544 bytes. 384 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: comet-ms-dbgsym Source: comet-ms Version: 2019015+cleaned1-3 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: The Debichem Group Installed-Size: 1844 Depends: comet-ms (= 2019015+cleaned1-3) Section: debug Priority: optional Description: debug symbols for comet-ms Build-Ids: 4c48ee5257d57700abdd4dd02a1253e1a8ce6600 drwxr-xr-x root/root 0 2020-08-13 21:49 ./ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/lib/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/lib/debug/.build-id/4c/ -rw-r--r-- root/root 1877048 2020-08-13 21:49 ./usr/lib/debug/.build-id/4c/48ee5257d57700abdd4dd02a1253e1a8ce6600.debug drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-08-13 21:49 ./usr/share/doc/comet-ms-dbgsym -> comet-ms comet-ms_2019015+cleaned1-3_s390x.deb ------------------------------------- new Debian package, version 2.0. size 787408 bytes: control archive=856 bytes. 762 bytes, 17 lines control 262 bytes, 4 lines md5sums Package: comet-ms Version: 2019015+cleaned1-3 Architecture: s390x Maintainer: The Debichem Group Installed-Size: 2466 Depends: libmstoolkit82 (>= 82), libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 9) Section: science Priority: optional Homepage: http://comet-ms.sourceforge.net Description: Tandem mass spectrometry (MS/MS) search engine Comet is an open source tandem mass spectrometry (MS/MS) sequence database search engine. It identifies peptides by searching MS/MS spectra against sequences present in protein sequence databases. . This package ships a binary that does MS/MS database searches. Supported input formats are mzXML, mzML, and ms2 files. Supported output formats are .out, SQT, and pepXML. drwxr-xr-x root/root 0 2020-08-13 21:49 ./ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/bin/ -rwxr-xr-x root/root 2509232 2020-08-13 21:49 ./usr/bin/comet-ms drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/doc/comet-ms/ -rw-r--r-- root/root 1243 2020-08-13 21:49 ./usr/share/doc/comet-ms/changelog.Debian.gz -rw-r--r-- root/root 2584 2020-08-13 21:49 ./usr/share/doc/comet-ms/copyright drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/man/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/man/man1/ -rw-r--r-- root/root 20 2020-08-13 21:49 ./usr/share/man/man1/comet-ms.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [579 B] Get:5 copy:/<>/apt_archive ./ Packages [668 B] Fetched 2210 B in 0s (91.7 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libdata-dump-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:s390x t1utils unzip 0 upgraded, 96 newly installed, 0 to remove and 0 not upgraded. Need to get 8054 kB of archives. After this operation, 23.3 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.21-1 [128 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.07-3+b5 [22.9 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4 [38.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libmetrics-any-perl all 0.06-1 [41.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libtest-metrics-any-perl all 0.01-2 [7060 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.77-3 [274 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.21-1 [12.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b6 [17.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2 [45.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1 [98.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1 [103 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010004-1 [339 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.91.0 [1282 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8054 kB in 0s (26.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... 21492 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../06-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../07-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../20-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../21-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../22-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../23-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../24-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../25-libcpanel-json-xs-perl_4.21-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.21-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../26-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. 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Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libparams-util-perl (1.07-3+b5) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libdata-validate-domain-perl (0.10-1) ... Setting up libproc-processtable-perl (0.59-2) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up lzop (1.04-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b7) ... Setting up libperlio-gzip-perl (0.19-1+b6) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.018+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010004-1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libtest-metrics-any-perl (0.01-2) ... Setting up libio-async-perl (0.77-3) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libio-async-loop-epoll-perl (0.21-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.91.0) ... Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 85840 Build-Time: 437 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 21 Job: comet-ms_2019015+cleaned1-3 Lintian: pass Machine Architecture: amd64 Package: comet-ms Package-Time: 468 Source-Version: 2019015+cleaned1-3 Space: 85840 Status: successful Version: 2019015+cleaned1-3 -------------------------------------------------------------------------------- Finished at 2020-08-23T09:26:44Z Build needed 00:07:48, 85840k disk space