sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | diamond-aligner 0.9.31-1 (arm64) Mon, 30 Mar 2020 17:29:18 +0000 | +==============================================================================+ Package: diamond-aligner Version: 0.9.31-1 Source Version: 0.9.31-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-097dd5a2-cf29-409c-bc6d-1dec1c960437' with '<>' I: NOTICE: Log filtering will replace 'build/diamond-aligner-sefwqd/resolver-cRPUqI' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-30-0801.21.pdiff [9237 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-30-1405.11.pdiff [30.5 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-30-1405.11.pdiff [30.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-30-0801.21.pdiff [7830 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-30-1405.11.pdiff [35.8 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-30-1405.11.pdiff [35.8 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8029 kB] Fetched 8315 kB in 1s (5589 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: dash linux-libc-dev 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1199 kB of archives. After this operation, 50.2 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 dash amd64 0.5.10.2-7 [114 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev amd64 5.5.13-1 [1085 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1199 kB in 0s (51.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12626 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-7_amd64.deb ... Unpacking dash (0.5.10.2-7) over (0.5.10.2-6) ... Setting up dash (0.5.10.2-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12626 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_5.5.13-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.5.13-1) over (5.4.19-1) ... Setting up linux-libc-dev:amd64 (5.5.13-1) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'diamond-aligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/diamond-aligner.git Please use: git clone https://salsa.debian.org/med-team/diamond-aligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 772 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main diamond-aligner 0.9.31-1 (dsc) [2041 B] Get:2 http://debian.oregonstate.edu/debian unstable/main diamond-aligner 0.9.31-1 (tar) [764 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main diamond-aligner 0.9.31-1 (diff) [6268 B] Fetched 772 kB in 0s (14.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/diamond-aligner-sefwqd/diamond-aligner-0.9.31' with '<>' I: NOTICE: Log filtering will replace 'build/diamond-aligner-sefwqd' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), cmake, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [412 B] Get:5 copy:/<>/apt_archive ./ Packages [502 B] Fetched 1871 B in 0s (85.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1 libbsd0 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2 libicu63 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf procps sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation cmake-doc ninja-build gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 krb5-doc krb5-user libstdc++-9-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:arm64 ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils build-essential cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1 libbsd0 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libcurl4 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2 libicu63 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 128 newly installed, 0 to remove and 0 not upgraded. Need to get 88.8 MB of archives. After this operation, 372 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10-20200324-1 [196 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-8 [197 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2-1 [102 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-4 [62.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-4 [262 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.34-5 [2788 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.15-1 [104 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-4 [2629 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-8 [1677 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-8 [10.7 MB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.16.3-1 [1628 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.0-2 [335 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-6 [266 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-7 [64.4 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-7 [115 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1e-1 [1543 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-7 [366 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-7 [156 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.49+dfsg-2 [92.0 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.49+dfsg-2 [226 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.40.0-1 [85.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1 [55.1 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.68.0-1 [321 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.9-1 [123 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.34.2-1 [127 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.16.3-1 [3673 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu-base amd64 9.3.0-8cross1 [197 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [6544 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-8cross1 [192 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10-20200324-1cross1 [192 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.30-2cross1 [1246 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10-20200324-1cross1 [34.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10-20200324-1cross1 [88.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10-20200324-1cross1 [22.9 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10-20200324-1cross1 [8608 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.3.0-8cross1 [347 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10-20200324-1cross1 [125 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10-20200324-1cross1 [285 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10-20200324-1cross1 [408 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10-20200324-1cross1 [122 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-arm64-cross all 9.3.0-8cross1 [887 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [6922 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1460 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.4.19-1cross1 [1153 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.30-2cross1 [2265 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-arm64-cross all 9.3.0-8cross1 [1637 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-aarch64-linux-gnu amd64 9.3.0-8cross1 [7127 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1180 B] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.10 [184 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.1-1 [1341 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.10 [1003 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10-20200324-1 [34.8 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.15-1 [90.4 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.30-4 [2469 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-8 [354 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10-20200324-1 [8856 B] Get:116 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.5.13-1 [1066 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.15-1 [111 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.30-4 [2280 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10-20200324-1 [89.9 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10-20200324-1 [23.4 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10-20200324-1 [126 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10-20200324-1 [292 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10-20200324-1 [448 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10-20200324-1 [123 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-8 [882 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-8 [1637 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-2 [87.9 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.8 MB in 1s (110 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12626 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Setting up libdebhelper-perl (12.10) ... Setting up libbrotli1:amd64 (1.0.7-6) ... Setting up libnghttp2-14:amd64 (1.40.0-1) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:arm64 (5.5.13-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up binutils-aarch64-linux-gnu (2.34-5) ... Setting up cpp-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up file (1:5.38-4) ... Setting up libldap-common (2.4.49+dfsg-2) ... Setting up libyaml-perl (1.30-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libkrb5support0:amd64 (1.17-7) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:arm64 (10-20200324-1) ... Setting up cpp-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libuv1:amd64 (1.34.2-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libncurses6:amd64 (6.2-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.30-2cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-8cross1) ... Setting up libk5crypto3:amd64 (1.17-7) ... Setting up gcc-10-cross-base (10-20200324-1cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up linux-libc-dev-arm64-cross (5.4.19-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up librhash0:amd64 (1.3.9-1) ... Setting up libcrypt-dev:amd64 (1:4.4.15-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-4) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.16.3-1) ... Setting up libkrb5-3:amd64 (1.17-7) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libprocps8:amd64 (2:3.3.16-4) ... Setting up libjsoncpp1:amd64 (1.7.4-3.1) ... Setting up gcc-9-base:arm64 (9.3.0-8) ... Setting up libgcc-s1-arm64-cross (10-20200324-1cross1) ... Setting up libatomic1-arm64-cross (10-20200324-1cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up liblsan0-arm64-cross (10-20200324-1cross1) ... Setting up libgomp1-arm64-cross (10-20200324-1cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-8) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:amd64 (3.4.0-2) ... Setting up libtsan0-arm64-cross (10-20200324-1cross1) ... Setting up libldap-2.4-2:amd64 (2.4.49+dfsg-2) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.30-2cross1) ... Setting up libasan5-arm64-cross (9.3.0-8cross1) ... Setting up libstdc++6-arm64-cross (10-20200324-1cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-7) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (10-20200324-1cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-8) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up procps (2:3.3.16-4) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up build-essential (12.8) ... Setting up libcurl4:amd64 (7.68.0-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (10-20200324-1cross1) ... Setting up libgcc-9-dev-arm64-cross (9.3.0-8cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.16.3-1) ... Setting up libstdc++-9-dev-arm64-cross (9.3.0-8cross1) ... Setting up gcc-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up po-debconf (1.0.21) ... Setting up g++-9-aarch64-linux-gnu (9.3.0-8cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libcrypt1:arm64 (1:4.4.15-1) ... Setting up libgcc-s1:arm64 (10-20200324-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.30-4) ... Setting up libcrypt-dev:arm64 (1:4.4.15-1) ... Setting up libc6-dev:arm64 (2.30-4) ... Setting up libstdc++6:arm64 (10-20200324-1) ... Setting up liblsan0:arm64 (10-20200324-1) ... Setting up libitm1:arm64 (10-20200324-1) ... Setting up libtsan0:arm64 (10-20200324-1) ... Setting up debhelper (12.10) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-2) ... Setting up libgomp1:arm64 (10-20200324-1) ... Setting up libasan5:arm64 (9.3.0-8) ... Setting up libatomic1:arm64 (10-20200324-1) ... Setting up libubsan1:arm64 (10-20200324-1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Setting up libgcc-9-dev:arm64 (9.3.0-8) ... Setting up libstdc++-9-dev:arm64 (9.3.0-8) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.30-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-5 dpkg-dev_1.19.7 g++-9_9.3.0-8 gcc-9_9.3.0-8 libc6-dev_2.30-4 libstdc++-9-dev_9.3.0-8 libstdc++-9-dev-arm64-cross_9.3.0-8cross1 libstdc++6_10-20200324-1 libstdc++6-arm64-cross_10-20200324-1cross1 linux-libc-dev_5.5.13-1 Package versions: adduser_3.118 apt_2.0.1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5 binutils-aarch64-linux-gnu_2.34-5 binutils-common_2.34-5 binutils-x86-64-linux-gnu_2.34-5 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 cmake_3.16.3-1 cmake-data_3.16.3-1 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-2 cpp-9_9.3.0-8 cpp-9-aarch64-linux-gnu_9.3.0-8cross1 cpp-aarch64-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-arm64_12.8 dash_0.5.10.2-7 debconf_1.5.73 debhelper_12.10 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-8 g++-9-aarch64-linux-gnu_9.3.0-8cross1 g++-aarch64-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200324-1 gcc-10-cross-base_10-20200324-1cross1 gcc-8-base_8.4.0-2 gcc-9_9.3.0-8 gcc-9-aarch64-linux-gnu_9.3.0-8cross1 gcc-9-aarch64-linux-gnu-base_9.3.0-8cross1 gcc-9-base_9.3.0-8 gcc-9-cross-base_9.3.0-8cross1 gcc-aarch64-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.0.1 libarchive-zip-perl_1.68-1 libarchive13_3.4.0-2 libasan5_9.3.0-8 libasan5-arm64-cross_9.3.0-8cross1 libatomic1_10-20200324-1 libatomic1-arm64-cross_10-20200324-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-5 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4 libc-dev-bin_2.30-4 libc6_2.30-4 libc6-arm64-cross_2.30-2cross1 libc6-dev_2.30-4 libc6-dev-arm64-cross_2.30-2cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200324-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-5 libctf0_2.34-5 libcurl4_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-8 libgcc-9-dev-arm64-cross_9.3.0-8cross1 libgcc-s1_10-20200324-1 libgcc-s1-arm64-cross_10-20200324-1cross1 libgcc1_1:10-20200324-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200324-1 libgomp1-arm64-cross_10-20200324-1cross1 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-7 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200324-1 libitm1-arm64-cross_10-20200324-1cross1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-7 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7 libkrb5support0_1.17-7 libldap-2.4-2_2.4.49+dfsg-2 libldap-common_2.4.49+dfsg-2 liblocale-gettext-perl_1.07-4 liblsan0_10-20200324-1 liblsan0-arm64-cross_10-20200324-1cross1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-2 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libprocps8_2:3.3.16-4 libpsl5_0.21.0-1 libquadmath0_10-20200324-1 librhash0_1.3.9-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1 libselinux1_3.0-1+b2 libsemanage-common_3.0-1 libsemanage1_3.0-1+b2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1e-1 libstdc++-9-dev_9.3.0-8 libstdc++-9-dev-arm64-cross_9.3.0-8cross1 libstdc++6_10-20200324-1 libstdc++6-arm64-cross_10-20200324-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.2-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200324-1 libtsan0-arm64-cross_10-20200324-1cross1 libubsan1_10-20200324-1 libubsan1-arm64-cross_10-20200324-1cross1 libuchardet0_0.0.6-3 libudev1_245.2-1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libuv1_1.34.2-1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.5.13-1 linux-libc-dev-arm64-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 procps_2:3.3.16-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: diamond-aligner Binary: diamond-aligner Architecture: any Version: 0.9.31-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/bbuchfink/diamond Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/diamond-aligner Vcs-Git: https://salsa.debian.org/med-team/diamond-aligner.git Build-Depends: debhelper-compat (= 12), cmake, zlib1g-dev Package-List: diamond-aligner deb science optional arch=any Checksums-Sha1: 1b355d473e84f7cc3b8fd38c3e046172524b0fd5 763692 diamond-aligner_0.9.31.orig.tar.xz 2b4530a0ffcc0a2c786fb26573df1e6b4e4a37df 6268 diamond-aligner_0.9.31-1.debian.tar.xz Checksums-Sha256: fddac4bf1c5b901ed39ab1951cd11e3ba5c2c9aac8761c865075e329e1fc1b8f 763692 diamond-aligner_0.9.31.orig.tar.xz a75d170543e13e35fa1995b554e11d2524a09847a015bfa2a5c7040af58b7d93 6268 diamond-aligner_0.9.31-1.debian.tar.xz Files: 77c5cc63fa1e60ad8b766610aebe2ed5 763692 diamond-aligner_0.9.31.orig.tar.xz 1de30cb01d391031b1a97dfdb2a0bcfa 6268 diamond-aligner_0.9.31-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl5+GooRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGPIg/9H0SQGP3S4+GsF3Px+FdzB+rApxFg1zN3 qRsa31x1EO3/886vxoSUMq86xvdfuEWHu8qBcnwoTBSa4GTmc7o22p+T/efSfR4S 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signature on ./diamond-aligner_0.9.31-1.dsc dpkg-source: info: extracting diamond-aligner in /<> dpkg-source: info: unpacking diamond-aligner_0.9.31.orig.tar.xz dpkg-source: info: unpacking diamond-aligner_0.9.31-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying avoid_unwanted_optimisation.patch dpkg-source: info: applying 82feea2aee5c82e283704b9317cb5e8abc625f90.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-097dd5a2-cf29-409c-bc6d-1dec1c960437 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package diamond-aligner dpkg-buildpackage: info: source version 0.9.31-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DX86=OFF cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_AUTOGEN_VERBOSE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DX86=OFF .. -- The C compiler identification is GNU 9.3.0 -- The CXX compiler identification is GNU 9.3.0 -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_AUTOGEN_VERBOSE CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-aarch64-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles /<>/obj-aarch64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-aarch64-linux-gnu' make -f CMakeFiles/arch_generic.dir/build.make CMakeFiles/arch_generic.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/CMakeFiles/arch_generic.dir/DependInfo.cmake --color= Scanning dependencies of target arch_generic make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f CMakeFiles/arch_generic.dir/build.make CMakeFiles/arch_generic.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 1%] Building CXX object CMakeFiles/arch_generic.dir/src/dp/swipe/banded_3frame_swipe.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/dp/swipe/banded_3frame_swipe.cpp.o -c /<>/src/dp/swipe/banded_3frame_swipe.cpp [ 2%] Building CXX object CMakeFiles/arch_generic.dir/src/dp/swipe/swipe.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/dp/swipe/swipe.cpp.o -c /<>/src/dp/swipe/swipe.cpp [ 3%] Building CXX object CMakeFiles/arch_generic.dir/src/dp/swipe/banded_swipe.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/dp/swipe/banded_swipe.cpp.o -c /<>/src/dp/swipe/banded_swipe.cpp /<>/src/dp/swipe/banded_swipe.cpp: In instantiation of ‘std::__cxx11::list DP::BandedSwipe::ARCH_GENERIC::swipe(const sequence&, Frame, std::vector::const_iterator, std::vector::const_iterator, _cbs, int, std::vector&, Statistics&) [with _sv = int; _traceback = DP::Traceback; _cbs = const signed char*; std::vector::const_iterator = __gnu_cxx::__normal_iterator >]’: /<>/src/dp/swipe/banded_swipe.cpp:487:203: required from here /<>/src/dp/swipe/banded_swipe.cpp:470:26: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] 470 | if (hsp.swipe_target == subject_begin[i].target_idx) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/src/dp/swipe/banded_swipe.cpp: In instantiation of ‘std::__cxx11::list DP::BandedSwipe::ARCH_GENERIC::swipe(const sequence&, Frame, std::vector::const_iterator, std::vector::const_iterator, _cbs, int, std::vector&, Statistics&) [with _sv = int; _traceback = DP::ScoreOnly; _cbs = const signed char*; std::vector::const_iterator = __gnu_cxx::__normal_iterator >]’: /<>/src/dp/swipe/banded_swipe.cpp:488:203: required from here /<>/src/dp/swipe/banded_swipe.cpp:470:26: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] /<>/src/dp/swipe/banded_swipe.cpp: In instantiation of ‘std::__cxx11::list DP::BandedSwipe::ARCH_GENERIC::swipe(const sequence&, Frame, std::vector::const_iterator, std::vector::const_iterator, _cbs, int, std::vector&, Statistics&) [with _sv = int; _traceback = DP::Traceback; _cbs = DP::NoCBS; std::vector::const_iterator = __gnu_cxx::__normal_iterator >]’: /<>/src/dp/swipe/banded_swipe.cpp:498:187: required from here /<>/src/dp/swipe/banded_swipe.cpp:470:26: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] /<>/src/dp/swipe/banded_swipe.cpp: In instantiation of ‘std::__cxx11::list DP::BandedSwipe::ARCH_GENERIC::swipe(const sequence&, Frame, std::vector::const_iterator, std::vector::const_iterator, _cbs, int, std::vector&, Statistics&) [with _sv = int; _traceback = DP::ScoreOnly; _cbs = DP::NoCBS; std::vector::const_iterator = __gnu_cxx::__normal_iterator >]’: /<>/src/dp/swipe/banded_swipe.cpp:499:187: required from here /<>/src/dp/swipe/banded_swipe.cpp:470:26: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘const int’ [-Wsign-compare] [ 4%] Building CXX object CMakeFiles/arch_generic.dir/src/search/collision.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/search/collision.cpp.o -c /<>/src/search/collision.cpp [ 5%] Building CXX object CMakeFiles/arch_generic.dir/src/search/stage1.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/search/stage1.cpp.o -c /<>/src/search/stage1.cpp [ 6%] Building CXX object CMakeFiles/arch_generic.dir/src/search/stage2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/search/stage2.cpp.o -c /<>/src/search/stage2.cpp [ 7%] Building CXX object CMakeFiles/arch_generic.dir/src/tools/benchmark.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/tools/benchmark.cpp.o -c /<>/src/tools/benchmark.cpp /<>/src/tools/benchmark.cpp:44:13: warning: ‘void Benchmark::ARCH_GENERIC::scan_cols(const Long_score_profile&, sequence, int, int, int)’ defined but not used [-Wunused-function] 44 | static void scan_cols(const Long_score_profile &qp, sequence s, int i, int j, int j_end) | ^~~~~~~~~ [ 8%] Building CXX object CMakeFiles/arch_generic.dir/src/dp/swipe/swipe_wrapper.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/dp/swipe/swipe_wrapper.cpp.o -c /<>/src/dp/swipe/swipe_wrapper.cpp [ 9%] Building CXX object CMakeFiles/arch_generic.dir/src/util/tantan.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -DDISPATCH_ARCH=ARCH_GENERIC -std=gnu++11 -o CMakeFiles/arch_generic.dir/src/util/tantan.cpp.o -c /<>/src/util/tantan.cpp make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' [ 9%] Built target arch_generic make -f CMakeFiles/diamond.dir/build.make CMakeFiles/diamond.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/CMakeFiles/diamond.dir/DependInfo.cmake --color= Scanning dependencies of target diamond make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f CMakeFiles/diamond.dir/build.make CMakeFiles/diamond.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 10%] Building CXX object CMakeFiles/diamond.dir/src/run/main.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -std=gnu++11 -o CMakeFiles/diamond.dir/src/run/main.cpp.o -c /<>/src/run/main.cpp [ 11%] Building CXX object CMakeFiles/diamond.dir/src/basic/config.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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[ 37%] Building CXX object CMakeFiles/diamond.dir/src/search/setup.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -std=gnu++11 -o CMakeFiles/diamond.dir/src/search/setup.cpp.o -c /<>/src/search/setup.cpp [ 38%] Building CXX object CMakeFiles/diamond.dir/src/data/taxonomy.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -std=gnu++11 -o CMakeFiles/diamond.dir/src/data/taxonomy.cpp.o -c /<>/src/data/taxonomy.cpp /<>/src/data/taxonomy.cpp: In member function ‘void Taxonomy::load_nodes()’: /<>/src/data/taxonomy.cpp:105:50: warning: format ‘%[^ ’ expects argument of type ‘char*’, but argument 5 has type ‘char (*)[64]’ [-Wformat=] 105 | if (sscanf(f.line.c_str(), "%u\t|\t%u\t|\t%63[^\t]", &taxid, &parent, &rank) != 3) | ~~~~~^~ ~~~~~ | | | | char* char (*)[64] [ 39%] Building CXX object CMakeFiles/diamond.dir/src/basic/masking.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wno-uninitialized -Wno-ignored-attributes -Wno-unused-variable -std=gnu++11 -o CMakeFiles/diamond.dir/src/basic/masking.cpp.o -c /<>/src/basic/masking.cpp [ 40%] Building CXX object CMakeFiles/diamond.dir/src/dp/banded_sw.cpp.o /usr/bin/aarch64-linux-gnu-g++ -DSTRICT_BAND -I/<>/src -I/<>/src/lib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fuse-ld=gold -Wdate-time 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/<>/debian/diamond-aligner/usr/bin/diamond make[1]: Leaving directory '/<>/obj-aarch64-linux-gnu' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress --exclude=.pdf make[1]: Leaving directory '/<>' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'diamond-aligner' in '../diamond-aligner_0.9.31-1_arm64.deb'. dpkg-deb: building package 'diamond-aligner-dbgsym' in '../diamond-aligner-dbgsym_0.9.31-1_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../diamond-aligner_0.9.31-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-03-30T17:33:39Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ diamond-aligner_0.9.31-1_arm64.changes: --------------------------------------- Format: 1.8 Date: Fri, 27 Mar 2020 16:13:46 +0100 Source: diamond-aligner Binary: diamond-aligner diamond-aligner-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 0.9.31-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: diamond-aligner - accelerated BLAST compatible local sequence aligner Changes: diamond-aligner (0.9.31-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Repository, Repository-Browse. Checksums-Sha1: 69e2280c3b589b75e4c9583a7426d5c9480a16bb 8644848 diamond-aligner-dbgsym_0.9.31-1_arm64.deb 158272a7fec28723a583ca26af3249645c57bde8 5732 diamond-aligner_0.9.31-1_arm64.buildinfo ff6803fadce809c3441d7f5cfc4936b97d14cba3 503844 diamond-aligner_0.9.31-1_arm64.deb Checksums-Sha256: 917ed7e060ee6df11be4bd73b56ed80d77aa9cb8339f52e34c6994a50490eb3c 8644848 diamond-aligner-dbgsym_0.9.31-1_arm64.deb 403c1bd191e3a8f565f6849e7254ad986d5bd97086db4fadce330a1500258e39 5732 diamond-aligner_0.9.31-1_arm64.buildinfo f5d9dc2fa5ba542499319a76c69493aaa33a38d5bbef2ab40829095c561ad678 503844 diamond-aligner_0.9.31-1_arm64.deb Files: 18e591e9599cf4c23eea2e3535d77285 8644848 debug optional diamond-aligner-dbgsym_0.9.31-1_arm64.deb d3e5292ce2718248b8f2695a9314b17f 5732 science optional diamond-aligner_0.9.31-1_arm64.buildinfo 13b971810538d64c12f516026c1c9b24 503844 science optional diamond-aligner_0.9.31-1_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: diamond-aligner Binary: diamond-aligner Architecture: arm64 Version: 0.9.31-1 Checksums-Md5: 18e591e9599cf4c23eea2e3535d77285 8644848 diamond-aligner-dbgsym_0.9.31-1_arm64.deb 13b971810538d64c12f516026c1c9b24 503844 diamond-aligner_0.9.31-1_arm64.deb Checksums-Sha1: 69e2280c3b589b75e4c9583a7426d5c9480a16bb 8644848 diamond-aligner-dbgsym_0.9.31-1_arm64.deb ff6803fadce809c3441d7f5cfc4936b97d14cba3 503844 diamond-aligner_0.9.31-1_arm64.deb Checksums-Sha256: 917ed7e060ee6df11be4bd73b56ed80d77aa9cb8339f52e34c6994a50490eb3c 8644848 diamond-aligner-dbgsym_0.9.31-1_arm64.deb f5d9dc2fa5ba542499319a76c69493aaa33a38d5bbef2ab40829095c561ad678 503844 diamond-aligner_0.9.31-1_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 30 Mar 2020 17:33:39 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-5), binutils-common (= 2.34-5), binutils-x86-64-linux-gnu (= 2.34-5), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), cmake (= 3.16.3-1), cmake-data (= 3.16.3-1), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-8), dash (= 0.5.10.2-7), debconf (= 1.5.73), debhelper (= 12.10), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-8), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200324-1), gcc-9 (= 9.3.0-8), gcc-9-base (= 9.3.0-8), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.0-2), libasan5 (= 9.3.0-8), libatomic1 (= 10-20200324-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3), libbinutils (= 2.34-5), libblkid1 (= 2.34-0.1), libbrotli1 (= 1.0.7-6), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-4), libc-dev-bin (= 2.30-4), libc6 (= 2.30-4), libc6-dev (= 2.30-4), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10-20200324-1), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.15-1), libcrypt1 (= 1:4.4.15-1), libctf-nobfd0 (= 2.34-5), libctf0 (= 2.34-5), libcurl4 (= 7.68.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.10), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-9-dev (= 9.3.0-8), libgcc-s1 (= 10-20200324-1), libgcc1 (= 1:10-20200324-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.12-2), libgomp1 (= 10-20200324-1), libgpg-error0 (= 1.37-1), libgssapi-krb5-2 (= 1.17-7), libhogweed5 (= 3.5.1+really3.5.1-2), libicu63 (= 63.2-3), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10-20200324-1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-7), libkrb5support0 (= 1.17-7), libldap-2.4-2 (= 2.4.49+dfsg-2), libldap-common (= 2.4.49+dfsg-2), liblsan0 (= 10-20200324-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.40.0-1), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libprocps8 (= 2:3.3.16-4), libpsl5 (= 0.21.0-1), libquadmath0 (= 10-20200324-1), librhash0 (= 1.3.9-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.3-1), libselinux1 (= 3.0-1+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1e-1), libstdc++-9-dev (= 9.3.0-8), libstdc++6 (= 10-20200324-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.2-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200324-1), libubsan1 (= 10-20200324-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.2-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libuv1 (= 1.34.2-1), libxml2 (= 2.9.10+dfsg-4), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.5.13-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), procps (= 2:3.3.16-4), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1585322026" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ diamond-aligner-dbgsym_0.9.31-1_arm64.deb ----------------------------------------- new Debian package, version 2.0. size 8644848 bytes: control archive=544 bytes. 405 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: diamond-aligner-dbgsym Source: diamond-aligner Version: 0.9.31-1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 8710 Depends: diamond-aligner (= 0.9.31-1) Section: debug Priority: optional Description: debug symbols for diamond-aligner Build-Ids: 69ab1842f1ee6e9f3c45c099b3f02119f808192d drwxr-xr-x root/root 0 2020-03-27 15:13 ./ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/lib/debug/.build-id/69/ -rw-r--r-- root/root 8907808 2020-03-27 15:13 ./usr/lib/debug/.build-id/69/ab1842f1ee6e9f3c45c099b3f02119f808192d.debug drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-03-27 15:13 ./usr/share/doc/diamond-aligner-dbgsym -> diamond-aligner diamond-aligner_0.9.31-1_arm64.deb ---------------------------------- new Debian package, version 2.0. size 503844 bytes: control archive=928 bytes. 811 bytes, 18 lines control 348 bytes, 5 lines md5sums Package: diamond-aligner Version: 0.9.31-1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1511 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 6), zlib1g (>= 1:1.1.4) Recommends: med-config (>= 2.1) Breaks: diamond Replaces: diamond Section: science Priority: optional Homepage: https://github.com/bbuchfink/diamond Description: accelerated BLAST compatible local sequence aligner DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000. drwxr-xr-x root/root 0 2020-03-27 15:13 ./ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/bin/ -rwxr-xr-x root/root 1527288 2020-03-27 15:13 ./usr/bin/diamond lrwxrwxrwx root/root 0 2020-03-27 15:13 ./usr/bin/diamond-aligner -> diamond drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/doc/diamond-aligner/ -rw-r--r-- root/root 91 2020-03-18 19:11 ./usr/share/doc/diamond-aligner/README.md -rw-r--r-- root/root 1364 2020-03-27 15:13 ./usr/share/doc/diamond-aligner/changelog.Debian.gz -rw-r--r-- root/root 1307 2020-03-27 15:13 ./usr/share/doc/diamond-aligner/copyright drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/man/ drwxr-xr-x root/root 0 2020-03-27 15:13 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2020-03-27 15:13 ./usr/share/man/man1/diamond-aligner.1.gz -> diamond.1.gz -rw-r--r-- root/root 2421 2020-03-27 15:13 ./usr/share/man/man1/diamond.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [545 B] Get:5 copy:/<>/apt_archive ./ Packages [632 B] Fetched 2140 B in 0s (80.5 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 7788 kB of archives. After this operation, 22.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-4 [661 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b3 [38.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.43-2 [15.0 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.19-1 [126 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 4 [7148 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-3 [320 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.067-1 [212 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3200-1 [39.1 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.23-1 [369 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.44-1 [83.5 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.12-1 [36.3 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004000-1 [12.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.008001-2 [331 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.61.0 [1289 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7788 kB in 0s (41.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... 23267 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libjson-maybexs-perl (1.004000-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up libxml-writer-perl (0.625-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3200-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.011+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.008001-2) ... Setting up libnet-dns-perl (1.23-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.61.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 180072 Build-Time: 230 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 20 Job: diamond-aligner_0.9.31-1 Lintian: pass Machine Architecture: amd64 Package: diamond-aligner Package-Time: 261 Source-Version: 0.9.31-1 Space: 180072 Status: successful Version: 0.9.31-1 -------------------------------------------------------------------------------- Finished at 2020-03-30T17:33:39Z Build needed 00:04:21, 180072k disk space