sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | dssp 4.2.2-2 (armel) Wed, 10 Apr 2024 23:30:41 +0000 | +==============================================================================+ Package: dssp Version: 4.2.2-2 Source Version: 4.2.2-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-f44f51b6-00ed-44f7-9c41-9954441822c8' with '<>' I: NOTICE: Log filtering will replace 'build/dssp-eIqjjm/resolver-2KcgTO' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian sid InRelease Get:2 http://localhost:3142/debian sid/main armel Packages [9374 kB] Fetched 9374 kB in 1s (7600 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'dssp' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dssp.git Please use: git clone https://salsa.debian.org/med-team/dssp.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 151 kB of source archives. Get:1 http://localhost:3142/debian sid/main dssp 4.2.2-2 (dsc) [2067 B] Get:2 http://localhost:3142/debian sid/main dssp 4.2.2-2 (tar) [144 kB] Get:3 http://localhost:3142/debian sid/main dssp 4.2.2-2 (diff) [4448 B] Fetched 151 kB in 1s (160 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/dssp-eIqjjm/dssp-4.2.2' with '<>' I: NOTICE: Log filtering will replace 'build/dssp-eIqjjm' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, mrc, libcifpp-dev (>= 5.0.7.1-1~), libboost-dev, libboost-regex-dev, zlib1g-dev, libmcfp-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), cmake, mrc, libcifpp-dev (>= 5.0.7.1-1~), libboost-dev, libboost-regex-dev, zlib1g-dev, libmcfp-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [815 B] Get:5 copy:/<>/apt_archive ./ Packages [858 B] Fetched 2282 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: mount tzdata Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cmake cmake-data cpp-13-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-13-arm-linux-gnueabi gcc-13-arm-linux-gnueabi-base gcc-13-base:armel gcc-13-cross-base-ports gcc-14-base:armel gcc-14-cross-base-ports gcc-arm-linux-gnueabi gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13t64 libasan8:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libboost-dev:armel libboost-regex-dev:armel libboost-regex1.83-dev:armel libboost-regex1.83.0:armel libboost1.83-dev:armel libbrotli1 libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcifpp-data libcifpp-dev:armel libcifpp5:armel libcom-err2 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libcurl4t64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libexpat1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armel libgcc-13-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2 libicu-dev:armel libicu72 libicu72:armel libio-string-perl libjsoncpp25 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1t64 libmcfp-dev:armel libncursesw6 libnghttp2-14 libpipeline1 libproc2-0 libpsl5t64 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libstdc++-13-dev:armel libstdc++-13-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuv1t64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db mrc:armel po-debconf procps sensible-utils ucf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode ninja-build gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:armel libboost1.83-doc:armel libboost-atomic1.83-dev:armel libboost-chrono1.83-dev:armel libboost-container1.83-dev:armel libboost-context1.83-dev:armel libboost-contract1.83-dev:armel libboost-coroutine1.83-dev:armel libboost-date-time1.83-dev:armel libboost-exception1.83-dev:armel libboost-fiber1.83-dev:armel libboost-filesystem1.83-dev:armel libboost-graph-parallel1.83-dev:armel libboost-graph1.83-dev:armel libboost-iostreams1.83-dev:armel libboost-json1.83-dev:armel libboost-locale1.83-dev:armel libboost-log1.83-dev:armel libboost-math1.83-dev:armel libboost-mpi-python1.83-dev:armel libboost-mpi1.83-dev:armel libboost-nowide1.83-dev:armel libboost-numpy1.83-dev:armel libboost-program-options1.83-dev:armel libboost-python1.83-dev:armel libboost-random1.83-dev:armel libboost-serialization1.83-dev:armel libboost-stacktrace1.83-dev:armel libboost-system1.83-dev:armel libboost-test1.83-dev:armel libboost-thread1.83-dev:armel libboost-timer1.83-dev:armel libboost-type-erasure1.83-dev:armel libboost-url1.83-dev:armel libboost-wave1.83-dev:armel libboost1.83-tools-dev:armel libmpfrc++-dev:armel libntl-dev:armel glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel krb5-doc krb5-user icu-doc:armel libstdc++-13-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel ca-certificates libarchive-cpio-perl krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cmake cmake-data cpp-13-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-13-arm-linux-gnueabi gcc-13-arm-linux-gnueabi-base gcc-13-base:armel gcc-13-cross-base-ports gcc-14-base:armel gcc-14-cross-base-ports gcc-arm-linux-gnueabi gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13t64 libasan8:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libboost-dev:armel libboost-regex-dev:armel libboost-regex1.83-dev:armel libboost-regex1.83.0:armel libboost1.83-dev:armel libbrotli1 libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcifpp-data libcifpp-dev:armel libcifpp5:armel libcom-err2 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libcurl4t64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libexpat1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armel libgcc-13-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2 libicu-dev:armel libicu72 libicu72:armel libio-string-perl libjsoncpp25 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblocale-gettext-perl libmagic-mgc libmagic1t64 libmcfp-dev:armel libncursesw6 libnghttp2-14 libpipeline1 libproc2-0 libpsl5t64 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libssh2-1t64 libstdc++-13-dev:armel libstdc++-13-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libuv1t64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db mrc:armel po-debconf procps sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel 0 upgraded, 124 newly installed, 0 to remove and 0 not upgraded. Need to get 131 MB of archives. After this operation, 644 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [972 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-7 [15.0 kB] Get:3 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.4+20240113-1 [135 kB] Get:4 http://localhost:3142/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get:5 http://localhost:3142/debian sid/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get:6 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:8 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:9 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:10 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:11 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:12 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB] Get:13 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40-5 [92.1 kB] Get:14 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get:15 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get:16 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:17 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:18 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:19 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:21 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-14 [496 kB] Get:22 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.42-4 [3216 kB] Get:23 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:24 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:25 http://localhost:3142/debian sid/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB] Get:26 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get:27 http://localhost:3142/debian sid/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get:28 http://localhost:3142/debian sid/main amd64 libcom-err2 amd64 1.47.0-2.4 [20.2 kB] Get:29 http://localhost:3142/debian sid/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get:30 http://localhost:3142/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:31 http://localhost:3142/debian sid/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get:33 http://localhost:3142/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get:34 http://localhost:3142/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get:35 http://localhost:3142/debian sid/main amd64 libldap-2.5-0 amd64 2.5.16+dfsg-2 [185 kB] Get:36 http://localhost:3142/debian sid/main amd64 libnghttp2-14 amd64 1.61.0-1 [75.3 kB] Get:37 http://localhost:3142/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:38 http://localhost:3142/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:39 http://localhost:3142/debian sid/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get:40 http://localhost:3142/debian sid/main amd64 libcurl4t64 amd64 8.7.1-2 [440 kB] Get:41 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:42 http://localhost:3142/debian sid/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get:43 http://localhost:3142/debian sid/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get:44 http://localhost:3142/debian sid/main amd64 libuv1t64 amd64 1.48.0-1.1 [147 kB] Get:45 http://localhost:3142/debian sid/main amd64 cmake-data all 3.28.3-1 [2128 kB] Get:46 http://localhost:3142/debian sid/main amd64 cmake amd64 3.28.3-1+b1 [10.5 MB] Get:47 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabi-base amd64 13.2.0-13cross1 [42.8 kB] Get:48 http://localhost:3142/debian sid/main amd64 cpp-13-arm-linux-gnueabi amd64 13.2.0-13cross1 [9283 kB] Get:49 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:13.2.1-6 [4028 B] Get:50 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:51 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base-ports all 13.2.0-13cross1 [38.2 kB] Get:52 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base-ports all 14-20240201-3cross2 [38.1 kB] Get:53 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.37-12cross1 [884 kB] Get:54 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 14-20240201-3cross2 [38.9 kB] Get:55 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 14-20240201-3cross2 [110 kB] Get:56 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 14-20240201-3cross2 [9180 B] Get:57 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 14-20240201-3cross2 [2536 kB] Get:58 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 14-20240201-3cross2 [546 kB] Get:59 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 14-20240201-3cross2 [1033 kB] Get:60 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-armel-cross all 13.2.0-13cross1 [774 kB] Get:61 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabi amd64 13.2.0-13cross1 [17.8 MB] Get:62 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:13.2.1-6 [1452 B] Get:63 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.37-12cross1 [1292 kB] Get:64 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-armel-cross all 13.2.0-13cross1 [2218 kB] Get:65 http://localhost:3142/debian sid/main amd64 g++-13-arm-linux-gnueabi amd64 13.2.0-13cross1 [10.2 MB] Get:66 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:13.2.1-6 [1204 B] Get:67 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:68 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:70 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:72 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b3 [313 kB] Get:73 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:74 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:75 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:76 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:77 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:78 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:79 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:80 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.10 [3484 B] Get:81 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:82 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:83 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:84 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:85 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get:86 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:87 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:88 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get:89 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:90 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:91 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:93 http://localhost:3142/debian sid/main amd64 debhelper all 13.15.3 [901 kB] Get:94 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.34-1 [28.9 kB] Get:95 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.34-1 [74.0 kB] Get:96 http://localhost:3142/debian sid/main armel gcc-13-base armel 13.2.0-23 [44.6 kB] Get:97 http://localhost:3142/debian sid/main armel gcc-14-base armel 14-20240330-1 [43.2 kB] Get:98 http://localhost:3142/debian sid/main amd64 icu-devtools amd64 72.1-4+b1 [208 kB] Get:99 http://localhost:3142/debian sid/main armel libgcc-s1 armel 14-20240330-1 [38.7 kB] Get:100 http://localhost:3142/debian sid/main armel libc6 armel 2.37-16 [2132 kB] Get:101 http://localhost:3142/debian sid/main armel libasan8 armel 14-20240330-1 [2544 kB] Get:102 http://localhost:3142/debian sid/main armel libatomic1 armel 14-20240330-1 [9404 B] Get:103 http://localhost:3142/debian sid/main armel libgomp1 armel 14-20240330-1 [112 kB] Get:104 http://localhost:3142/debian sid/main armel libstdc++6 armel 14-20240330-1 [594 kB] Get:105 http://localhost:3142/debian sid/main armel libubsan1 armel 14-20240330-1 [1033 kB] Get:106 http://localhost:3142/debian sid/main armel libgcc-13-dev armel 13.2.0-23 [770 kB] Get:107 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.36-4 [96.9 kB] Get:108 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.36-4 [126 kB] Get:109 http://localhost:3142/debian sid/main armel libc6-dev armel 2.37-16 [1296 kB] Get:110 http://localhost:3142/debian sid/main armel libstdc++-13-dev armel 13.2.0-23 [2263 kB] Get:111 http://localhost:3142/debian sid/main armel libboost1.83-dev armel 1.83.0-2.1+b1 [10.6 MB] Get:112 http://localhost:3142/debian sid/main armel libboost-dev armel 1.83.0.2+b2 [3832 B] Get:113 http://localhost:3142/debian sid/main armel libboost-regex1.83.0 armel 1.83.0-2.1+b1 [304 kB] Get:114 http://localhost:3142/debian sid/main armel libicu72 armel 72.1-4+b1 [9037 kB] Get:115 http://localhost:3142/debian sid/main armel libicu-dev armel 72.1-4+b1 [10.1 MB] Get:116 http://localhost:3142/debian sid/main armel libboost-regex1.83-dev armel 1.83.0-2.1+b1 [334 kB] Get:117 http://localhost:3142/debian sid/main armel libboost-regex-dev armel 1.83.0.2+b2 [3856 B] Get:118 http://localhost:3142/debian sid/main amd64 libcifpp-data all 5.0.7.1-3 [452 kB] Get:119 http://localhost:3142/debian sid/main armel zlib1g armel 1:1.3.dfsg-3.1 [74.3 kB] Get:120 http://localhost:3142/debian sid/main armel libcifpp5 armel 5.0.7.1-3+b1 [723 kB] Get:121 http://localhost:3142/debian sid/main armel zlib1g-dev armel 1:1.3.dfsg-3.1 [904 kB] Get:122 http://localhost:3142/debian sid/main armel libcifpp-dev armel 5.0.7.1-3+b1 [86.5 kB] Get:123 http://localhost:3142/debian sid/main armel libmcfp-dev armel 1.2.4-1 [16.0 kB] Get:124 http://localhost:3142/debian sid/main armel mrc armel 1.3.10-1 [46.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 131 MB in 1s (185 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12865 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-7_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../001-libncursesw6_6.4+20240113-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.4+20240113-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-4_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-4_amd64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... 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Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../123-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up binutils-arm-linux-gnueabi (2.42-4) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40-5) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:armel (14-20240330-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libuv1t64:amd64 (1.48.0-1.1) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up gcc-13-arm-linux-gnueabi-base:amd64 (13.2.0-13cross1) ... Setting up libcom-err2:amd64 (1.47.0-2.4) ... Setting up file (1:5.45-3) ... Setting up libyaml-perl (1.31-1) ... Setting up libfakeroot:amd64 (1.34-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up fakeroot (1.34-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:armel (13.2.0-23) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libproc2-0:amd64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:amd64 (1.9.5-6+b2) ... Setting up icu-devtools (72.1-4+b1) ... Setting up libncursesw6:amd64 (6.4+20240113-1) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libcifpp-data (5.0.7.1-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up autoconf (2.71-3) ... Setting up libc6-armel-cross (2.37-12cross1) ... Setting up dwz (0.15-1+b1) ... Setting up gcc-14-cross-base-ports (14-20240201-3cross2) ... Setting up sensible-utils (0.0.22) ... Setting up librhash0:amd64 (1.4.3-3+b1) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libsub-override-perl (0.10-1) ... Setting up libmcfp-dev:armel (1.2.4-1) ... Setting up cmake-data (3.28.3-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Setting up libc6-dev-armel-cross (2.37-12cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up gcc-13-cross-base-ports (13.2.0-13cross1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up cpp-13-arm-linux-gnueabi (13.2.0-13cross1) ... Setting up libgomp1-armel-cross (14-20240201-3cross2) ... Setting up libtool (2.4.7-7) ... Setting up libgcc-s1-armel-cross (14-20240201-3cross2) ... Setting up libstdc++6-armel-cross (14-20240201-3cross2) ... Setting up libatomic1-armel-cross (14-20240201-3cross2) ... Setting up libldap-2.5-0:amd64 (2.5.16+dfsg-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-arm-linux-gnueabi (4:13.2.1-6) ... Setting up libubsan1-armel-cross (14-20240201-3cross2) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libarchive13t64:amd64 (3.7.2-2) ... Setting up libasan8-armel-cross (14-20240201-3cross2) ... Setting up libcurl4t64:amd64 (8.7.1-2) ... Setting up libgcc-13-dev-armel-cross (13.2.0-13cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up gcc-13-arm-linux-gnueabi (13.2.0-13cross1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-13-dev-armel-cross (13.2.0-13cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:13.2.1-6) ... Setting up cmake (3.28.3-1+b1) ... Setting up g++-13-arm-linux-gnueabi (13.2.0-13cross1) ... Setting up debhelper (13.15.3) ... Setting up g++-arm-linux-gnueabi (4:13.2.1-6) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-armel (12.10) ... Setting up libgcc-s1:armel (14-20240330-1) ... Setting up libc6:armel (2.37-16) ... Setting up libasan8:armel (14-20240330-1) ... Setting up libstdc++6:armel (14-20240330-1) ... Setting up libicu72:armel (72.1-4+b1) ... Setting up libboost-regex1.83.0:armel (1.83.0-2.1+b1) ... Setting up zlib1g:armel (1:1.3.dfsg-3.1) ... Setting up libcrypt1:armel (1:4.4.36-4) ... Setting up libgomp1:armel (14-20240330-1) ... Setting up mrc:armel (1.3.10-1) ... Setting up libatomic1:armel (14-20240330-1) ... Setting up libubsan1:armel (14-20240330-1) ... Setting up libgcc-13-dev:armel (13.2.0-23) ... Setting up libcrypt-dev:armel (1:4.4.36-4) ... Setting up libc6-dev:armel (2.37-16) ... Setting up libicu-dev:armel (72.1-4+b1) ... Setting up libstdc++-13-dev:armel (13.2.0-23) ... Setting up libboost1.83-dev:armel (1.83.0-2.1+b1) ... Setting up libcifpp5:armel (5.0.7.1-3+b1) ... Setting up libboost-regex1.83-dev:armel (1.83.0-2.1+b1) ... Setting up zlib1g-dev:armel (1:1.3.dfsg-3.1) ... Setting up libboost-dev:armel (1.83.0.2+b2) ... Setting up libboost-regex-dev:armel (1.83.0.2+b2) ... Setting up libcifpp-dev:armel (5.0.7.1-3+b1) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.37-16) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-23 gcc-13_13.2.0-23 libc6-dev_2.37-16 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-armel-cross_13.2.0-13cross1 libstdc++6_14-20240330-1 libstdc++6-armel-cross_14-20240201-3cross2 linux-libc-dev_6.7.9-2 Package versions: adduser_3.137 apt_2.7.14 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-4 binutils-arm-linux-gnueabi_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40-5 bsdutils_1:2.40-5 build-essential_12.10 bzip2_1.0.8-5.1 cmake_3.28.3-1+b1 cmake-data_3.28.3-1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-23 cpp-13-arm-linux-gnueabi_13.2.0-13cross1 cpp-13-x86-64-linux-gnu_13.2.0-23 cpp-arm-linux-gnueabi_4:13.2.1-6 cpp-x86-64-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-armel_12.10 dash_0.5.12-6 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.6 dpkg-cross_2.6.20 dpkg-dev_1.22.6 dwz_0.15-1+b1 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-5 g++_4:13.2.0-7 g++-13_13.2.0-23 g++-13-arm-linux-gnueabi_13.2.0-13cross1 g++-13-x86-64-linux-gnu_13.2.0-23 g++-arm-linux-gnueabi_4:13.2.1-6 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-23 gcc-13-arm-linux-gnueabi_13.2.0-13cross1 gcc-13-arm-linux-gnueabi-base_13.2.0-13cross1 gcc-13-base_13.2.0-23 gcc-13-cross-base-ports_13.2.0-13cross1 gcc-13-x86-64-linux-gnu_13.2.0-23 gcc-14-base_14-20240330-1 gcc-14-cross-base-ports_14-20240201-3cross2 gcc-arm-linux-gnueabi_4:13.2.1-6 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-3 grep_3.11-4 groff-base_1.23.0-3+b1 gzip_1.12-1.1 hostname_3.23+nmu2 icu-devtools_72.1-4+b1 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libapt-pkg6.0t64_2.7.14 libarchive-zip-perl_1.68-1 libarchive13t64_3.7.2-2 libasan8_14-20240330-1 libasan8-armel-cross_14-20240201-3cross2 libatomic1_14-20240330-1 libatomic1-armel-cross_14-20240201-3cross2 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libbinutils_2.42-4 libblkid1_2.40-5 libboost-dev_1.83.0.2+b2 libboost-regex-dev_1.83.0.2+b2 libboost-regex1.83-dev_1.83.0-2.1+b1 libboost-regex1.83.0_1.83.0-2.1+b1 libboost1.83-dev_1.83.0-2.1+b1 libbrotli1_1.1.0-2+b3 libbz2-1.0_1.0.8-5.1 libc-bin_2.37-16 libc-dev-bin_2.37-16 libc6_2.37-16 libc6-armel-cross_2.37-12cross1 libc6-dev_2.37-16 libc6-dev-armel-cross_2.37-12cross1 libcap-ng0_0.8.4-2 libcap2_1:2.66-5 libcc1-0_14-20240330-1 libcifpp-data_5.0.7.1-3 libcifpp-dev_5.0.7.1-3+b1 libcifpp5_5.0.7.1-3+b1 libcom-err2_1.47.0-2.4 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libcurl4t64_8.7.1-2 libdb5.3t64_5.3.28+dfsg2-6 libdebconfclient0_0.271+b3 libdebhelper-perl_13.15.3 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.6 libelf1t64_0.191-1+b1 libexpat1_2.6.2-1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-23 libgcc-13-dev-armel-cross_13.2.0-13cross1 libgcc-s1_14-20240330-1 libgcc-s1-armel-cross_14-20240201-3cross2 libgcrypt20_1.10.3-2 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 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SHA512 Format: 3.0 (quilt) Source: dssp Binary: dssp Architecture: any Version: 4.2.2-2 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman Homepage: https://github.com/PDB-REDO/dssp Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/dssp Vcs-Git: https://salsa.debian.org/med-team/dssp.git Testsuite: autopkgtest Testsuite-Triggers: libcifpp-dev Build-Depends: debhelper-compat (= 13), cmake, mrc, libcifpp-dev (>= 5.0.7.1-1~), libboost-dev, libboost-regex-dev, zlib1g-dev, libmcfp-dev Package-List: dssp deb science optional arch=any Checksums-Sha1: e3d86c8b5ebaa919b6b0e4525ba7ca4651ff9b6e 144356 dssp_4.2.2.orig.tar.gz 742234db088d7c37748bd13c69e23854e3461c39 4448 dssp_4.2.2-2.debian.tar.xz Checksums-Sha256: 59e2810f0c4a484d9b767448a045fce2bd48ad05f410d9e286d9dd3e9b82b823 144356 dssp_4.2.2.orig.tar.gz 499d099ceabd2d1c6bded0c59a3714b1978b9a9f166f78e756f223bdb1feefc0 4448 dssp_4.2.2-2.debian.tar.xz Files: 53df26e846064b6bd80bfc9d1c17bf6d 144356 dssp_4.2.2.orig.tar.gz 88141c14de1b30a94eb4c50ab66993f1 4448 dssp_4.2.2-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEpytoJCJrtAfiS56AWHUD7Hrn7c4FAmPblcMWHG1hYXJ0ZW5A aGVra2VsbWFuLmNvbQAKCRBYdQPseuftzm0DD/9DjrqtqdWaeDldHcho4Fu4ptap qEjcGk71n3RNeZYYaHYdNDs5TAPT1lXa3DGaTJU/DSnGDyBPMX0uiyQo73lxmO30 UwgASPkQJ00GpLucbOZBm02yxUZAWxpuG2DyUFwFnd81aECf3PbLVoZmb1XJDNan 6SDxvkkb/RvLDJ/TG4R9nWWhA1bTetGYpADNWqvdMis55Wu8lyAMovjEH4nVtm9c Vm9X+rE1+xfS1495LWzp2pqiXKGMDvvSq27xSAfqUC13JA66jil/ApVvIRUzUUcg rFtXCVZIoXx+4+32xF8kfm8642+1mp6SM3oBNbUIbKkzwOHWDl6AZMVGlFllzDNi Lyar/EI9aFN0wLR+LZIiNim2lYXHo4XGd9orz7V6BXcp2hCHC9//C3TWvAqJeiqh MlUSHfzaHuJUHw/vvXfjuHCEwbyduk7mKzzzNK+xrynsYvC3Wsu7IFno4HWwX46C 6RDaT7WiEGfjtQzJrDpZPipiyolJXkwmcsTdvPapkVDAM6eyDty3kKy6hEAcFeez 2dVjXLJR2DkKF8xMtRxGDT+BiW5WTdvs4BPSu+m2xy/mvruK1x90BKy5gXIJKOqh pSahGtTpAFZxaVCSUWOntKypweuvDKEUg1nTuFHWxWVVvmvJa6YZ2XVghDq31NYs zLY2euUbZtQ8u/ob0w== =GxVh -----END PGP SIGNATURE----- gpgv: Signature made Thu Feb 2 10:51:47 2023 UTC gpgv: using RSA key A72B6824226BB407E24B9E80587503EC7AE7EDCE gpgv: issuer "maarten@hekkelman.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dssp_4.2.2-2.dsc: no acceptable signature found dpkg-source: info: extracting dssp in /<> dpkg-source: info: unpacking dssp_4.2.2.orig.tar.gz dpkg-source: info: unpacking dssp_4.2.2-2.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.T94KHCtUfp/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-f44f51b6-00ed-44f7-9c41-9954441822c8 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package dssp dpkg-buildpackage: info: source version 4.2.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-arm-linux-gnueabi && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabi-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabi-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabi-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabi -DBUILD_TESTING:BOOL=OFF .. -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabi-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:37 (include): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.28/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:37 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Looking for C++ include filesystem -- Looking for C++ include filesystem - found -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED - Success -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /usr/lib/arm-linux-gnueabi/libz.so (found version "1.3") -- Found Boost: /usr/lib/arm-linux-gnueabi/cmake/Boost-1.83.0/BoostConfig.cmake (found version "1.83.0") found components: regex Using resources compiled with -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabi dh_auto_build -a cd obj-arm-linux-gnueabi && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles /<>/obj-arm-linux-gnueabi//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make -f CMakeFiles/dssp.dir/build.make CMakeFiles/dssp.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/CMakeFiles/dssp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f CMakeFiles/dssp.dir/build.make CMakeFiles/dssp.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 16%] Building CXX object CMakeFiles/dssp.dir/src/dssp.cpp.o /usr/bin/arm-linux-gnueabi-g++ -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/<>/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -MD -MT CMakeFiles/dssp.dir/src/dssp.cpp.o -MF CMakeFiles/dssp.dir/src/dssp.cpp.o.d -o CMakeFiles/dssp.dir/src/dssp.cpp.o -c /<>/src/dssp.cpp In file included from /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algo.h:61, from /usr/arm-linux-gnueabi/include/c++/13/functional:67, from /usr/include/cif++/condition.hpp:32, from /usr/include/cif++/category.hpp:31, from /usr/include/cif++/datablock.hpp:29, from /usr/include/cif++/file.hpp:32, from /usr/include/cif++.hpp:30, from /<>/include/dssp.hpp:32, from /<>/src/dssp.cpp:29: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = accumulator::candidate; _Compare = __gnu_cxx::__ops::_Iter_less_val]’: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_heap.h:135:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 135 | __push_heap(_RandomAccessIterator __first, | ^~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/13/string:51, from /usr/arm-linux-gnueabi/include/c++/13/stdexcept:39, from /usr/arm-linux-gnueabi/include/c++/13/system_error:43, from /usr/arm-linux-gnueabi/include/c++/13/bits/fs_fwd.h:35, from /usr/arm-linux-gnueabi/include/c++/13/filesystem:48, from /usr/include/cif++/utilities.hpp:31, from /usr/include/cif++.hpp:29: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algobase.h:2061:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2061 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algobase.h:2061:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabi/include/c++/13/vector:72, from /usr/include/cif++/forward_decl.hpp:32, from /usr/include/cif++/category.hpp:29: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const accumulator::candidate&}; _Tp = accumulator::candidate; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator]’, inlined from ‘void accumulator::operator()(const point&, const point&, double, double)’ at /<>/src/dssp.cpp:578:17, inlined from ‘float dssp::residue::CalculateSurface(const point&, float, const std::vector&)’ at /<>/src/dssp.cpp:641:14: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator]’, inlined from ‘void accumulator::operator()(const point&, const point&, double, double)’ at /<>/src/dssp.cpp:578:17, inlined from ‘float dssp::residue::CalculateSurface(const point&, float, const std::vector&)’ at /<>/src/dssp.cpp:642:14: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator]’, inlined from ‘void accumulator::operator()(const point&, const point&, double, double)’ at /<>/src/dssp.cpp:578:17, inlined from ‘float dssp::residue::CalculateSurface(const point&, float, const std::vector&)’ at /<>/src/dssp.cpp:643:14: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator]’, inlined from ‘void accumulator::operator()(const point&, const point&, double, double)’ at /<>/src/dssp.cpp:578:17, inlined from ‘float dssp::residue::CalculateSurface(const point&, float, const std::vector&)’ at /<>/src/dssp.cpp:644:14: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator]’, inlined from ‘void accumulator::operator()(const point&, const point&, double, double)’ at /<>/src/dssp.cpp:578:17, inlined from ‘float dssp::residue::CalculateSurface(const point&, float, const std::vector&)’ at /<>/src/dssp.cpp:647:15: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {dssp::residue}; _Tp = dssp::residue; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {dssp::residue}; _Tp = dssp::residue; _Alloc = std::allocator]’, inlined from ‘DSSP_impl::DSSP_impl(const cif::datablock&, int, int)’ at /<>/src/dssp.cpp:1412:25: /usr/arm-linux-gnueabi/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = DSSP_impl::findRes(const std::string&, int)::]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algo.h:3923:28, inlined from ‘auto DSSP_impl::findRes(const std::string&, int)’ at /<>/src/dssp.cpp:1345:22, inlined from ‘void DSSP_impl::calculateSecondaryStructure()’ at /<>/src/dssp.cpp:1489:20: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algobase.h:2114:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2114 | return __find_if(__first, __last, __pred, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2115 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = DSSP_impl::findRes(const std::string&, int)::]’ at /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algo.h:3923:28, inlined from ‘auto DSSP_impl::findRes(const std::string&, int)’ at /<>/src/dssp.cpp:1345:22, inlined from ‘void DSSP_impl::calculateSecondaryStructure()’ at /<>/src/dssp.cpp:1498:20: /usr/arm-linux-gnueabi/include/c++/13/bits/stl_algobase.h:2114:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2114 | return __find_if(__first, __last, __pred, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2115 | std::__iterator_category(__first)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 33%] Linking CXX static library libdssp.a /usr/bin/cmake -P CMakeFiles/dssp.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/dssp.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-ar qc libdssp.a CMakeFiles/dssp.dir/src/dssp.cpp.o /usr/bin/arm-linux-gnueabi-ranlib libdssp.a make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 33%] Built target dssp make -f CMakeFiles/mkdssp.dir/build.make CMakeFiles/mkdssp.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 50%] Generating mkdssp_rsrc.obj /usr/bin/mrc -o /<>/obj-arm-linux-gnueabi/mkdssp_rsrc.obj /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /usr/bin/mrc: 1: Syntax error: word unexpected (expecting ")") make[3]: *** [CMakeFiles/mkdssp.dir/build.make:77: mkdssp_rsrc.obj] Error 2 make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make[2]: *** [CMakeFiles/Makefile2:115: CMakeFiles/mkdssp.dir/all] Error 2 make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' make[1]: *** [Makefile:159: all] Error 2 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabi' dh_auto_build: error: cd obj-arm-linux-gnueabi && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make: *** [debian/rules:15: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-04-10T23:31:23Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 13224 Build-Time: 17 Distribution: unstable Fail-Stage: build Foreign Architectures: armel Host Architecture: armel Install-Time: 16 Job: dssp_4.2.2-2 Machine Architecture: amd64 Package: dssp Package-Time: 42 Source-Version: 4.2.2-2 Space: 13224 Status: attempted Version: 4.2.2-2 -------------------------------------------------------------------------------- Finished at 2024-04-10T23:31:23Z Build needed 00:00:42, 13224k disk space