sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | elph 1.0.1-5 (arm64) Wed, 01 Jul 2020 08:38:16 +0000 | +==============================================================================+ Package: elph Version: 1.0.1-5 Source Version: 1.0.1-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-17303ac7-d540-4ba0-b10e-ec5dd332ad2a' with '<>' I: NOTICE: Log filtering will replace 'build/elph-k3FWfN/resolver-EvA1Qi' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://debian.oregonstate.edu/debian unstable InRelease Get:2 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8110 kB] Fetched 8110 kB in 2s (4578 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'elph' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/elph.git Please use: git clone https://salsa.debian.org/med-team/elph.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 43.1 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main elph 1.0.1-5 (dsc) [1960 B] Get:2 http://debian.oregonstate.edu/debian unstable/main elph 1.0.1-5 (tar) [37.2 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main elph 1.0.1-5 (diff) [4000 B] Fetched 43.1 kB in 0s (3914 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/elph-k3FWfN/elph-1.0.1' with '<>' I: NOTICE: Log filtering will replace 'build/elph-k3FWfN' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [409 B] Get:5 copy:/<>/apt_archive ./ Packages [499 B] Fetched 1865 B in 0s (77.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db perl perl-modules-5.30 po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 gnupg git bzr libstdc++-9-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:arm64 libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-10-base:arm64 gcc-10-cross-base gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libgomp1:arm64 libgomp1-arm64-cross libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libperl5.30 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db perl perl-modules-5.30 po-debconf sbuild-build-depends-main-dummy:arm64 sensible-utils ucf 0 upgraded, 105 newly installed, 0 to remove and 0 not upgraded. Need to get 89.4 MB of archives. After this operation, 385 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.35.2-6 [129 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-1 [1315 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.1.0-4 [197 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-14 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.34-8 [2790 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-14 [1701 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-14 [10.7 MB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.3 [1468 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.3 [1905 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu-base amd64 9.3.0-13cross1 [197 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-aarch64-linux-gnu amd64 9.3.0-13cross1 [6548 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-13cross1 [193 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.1.0-3cross1 [194 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.30-2cross1 [1246 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10.1.0-3cross1 [34.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10.1.0-3cross1 [89.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10.1.0-3cross1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10.1.0-3cross1 [9252 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.3.0-13cross1 [347 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10.1.0-3cross1 [125 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10.1.0-3cross1 [285 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10.1.0-3cross1 [411 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10.1.0-3cross1 [122 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-arm64-cross all 9.3.0-13cross1 [891 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu amd64 9.3.0-13cross1 [6934 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1460 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.4.19-1cross1 [1153 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.30-2cross1 [2265 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-arm64-cross all 9.3.0-13cross1 [1640 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-aarch64-linux-gnu amd64 9.3.0-13cross1 [7134 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1180 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.1 [187 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.1-1 [14.9 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.3-1 [1341 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.1 [1012 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.15 [181 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.1.0-4 [34.7 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.16-1 [90.4 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.30-8 [2468 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-14 [354 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.1.0-4 [9456 B] Get:95 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.7.6-1 [1107 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.16-1 [111 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.30-8 [2281 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.1.0-4 [90.9 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.1.0-4 [23.8 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.1.0-4 [126 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.1.0-4 [293 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.1.0-4 [450 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.1.0-4 [123 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-14 [889 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-14 [1660 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 89.4 MB in 1s (115 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10480 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.35.2-6_amd64.deb ... Unpacking bsdextrautils (2.35.2-6) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-1_amd64.deb ... Unpacking man-db (2.9.3-1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... 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Selecting previously unselected package sbuild-build-depends-main-dummy:arm64. Preparing to unpack .../104-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up bsdextrautils (2.35.2-6) ... Setting up libicu67:amd64 (67.1-2) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.64.3-1) ... No schema files found: doing nothing. Setting up gcc-9-aarch64-linux-gnu-base:amd64 (9.3.0-13cross1) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:arm64 (5.7.6-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up binutils-aarch64-linux-gnu (2.34-8) ... Setting up cpp-9-aarch64-linux-gnu (9.3.0-13cross1) ... Setting up file (1:5.38-5) ... Setting up gcc-10-base:arm64 (10.1.0-4) ... Setting up cpp-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.30-2cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-13cross1) ... Setting up gcc-10-cross-base (10.1.0-3cross1) ... Setting up linux-libc-dev-arm64-cross (5.4.19-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:arm64 (9.3.0-14) ... Setting up libgcc-s1-arm64-cross (10.1.0-3cross1) ... Setting up libatomic1-arm64-cross (10.1.0-3cross1) ... Setting up liblsan0-arm64-cross (10.1.0-3cross1) ... Setting up libgomp1-arm64-cross (10.1.0-3cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-14) ... Setting up libtool (2.4.6-14) ... Setting up libtsan0-arm64-cross (10.1.0-3cross1) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.30-2cross1) ... Setting up libasan5-arm64-cross (9.3.0-13cross1) ... Setting up libstdc++6-arm64-cross (10.1.0-3cross1) ... Setting up perl (5.30.3-4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (10.1.0-3cross1) ... Setting up ucf (3.0043) ... Setting up g++-9 (9.3.0-14) ... Setting up libdpkg-perl (1.20.3) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (10.1.0-3cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libgcc-9-dev-arm64-cross (9.3.0-13cross1) ... Setting up man-db (2.9.3-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.47.15) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-9-aarch64-linux-gnu (9.3.0-13cross1) ... Setting up build-essential (12.8) ... Setting up libstdc++-9-dev-arm64-cross (9.3.0-13cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libfile-stripnondeterminism-perl (1.8.1-1) ... Setting up gcc-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-aarch64-linux-gnu (9.3.0-13cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.8.1-1) ... Setting up g++-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libcrypt1:arm64 (1:4.4.16-1) ... Setting up libgcc-s1:arm64 (10.1.0-4) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.30-8) ... Setting up libcrypt-dev:arm64 (1:4.4.16-1) ... Setting up libc6-dev:arm64 (2.30-8) ... Setting up libstdc++6:arm64 (10.1.0-4) ... Setting up liblsan0:arm64 (10.1.0-4) ... Setting up libitm1:arm64 (10.1.0-4) ... Setting up libtsan0:arm64 (10.1.0-4) ... Setting up debhelper (13.1) ... Setting up libgomp1:arm64 (10.1.0-4) ... Setting up libasan5:arm64 (9.3.0-14) ... Setting up libatomic1:arm64 (10.1.0-4) ... Setting up libubsan1:arm64 (10.1.0-4) ... Setting up libgcc-9-dev:arm64 (9.3.0-14) ... Setting up libstdc++-9-dev:arm64 (9.3.0-14) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2 (2020-04-29) amd64 (x86_64) Toolchain package versions: binutils_2.34-8 dpkg-dev_1.20.3 g++-9_9.3.0-14 gcc-9_9.3.0-14 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-arm64-cross_9.3.0-13cross1 libstdc++6_10.1.0-4 libstdc++6-arm64-cross_10.1.0-3cross1 linux-libc-dev_5.7.6-1 Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8 binutils-aarch64-linux-gnu_2.34-8 binutils-common_2.34-8 binutils-x86-64-linux-gnu_2.34-8 bsdextrautils_2.35.2-6 bsdutils_1:2.35.2-6 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.32-2 cpp_4:9.2.1-3.1 cpp-8_8.4.0-4 cpp-9_9.3.0-14 cpp-9-aarch64-linux-gnu_9.3.0-13cross1 cpp-aarch64-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-arm64_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.1 debian-archive-keyring_2019.1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dmsetup_2:1.02.167-1+b1 dpkg_1.20.3 dpkg-cross_2.6.15-3 dpkg-dev_1.20.3 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-6 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-14 g++-9-aarch64-linux-gnu_9.3.0-13cross1 g++-aarch64-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-4 gcc-10-cross-base_10.1.0-3cross1 gcc-8-base_8.4.0-4 gcc-9_9.3.0-14 gcc-9-aarch64-linux-gnu_9.3.0-13cross1 gcc-9-aarch64-linux-gnu-base_9.3.0-13cross1 gcc-9-base_9.3.0-14 gcc-9-cross-base_9.3.0-13cross1 gcc-aarch64-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.15 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-14 libasan5-arm64-cross_9.3.0-13cross1 libatomic1_10.1.0-4 libatomic1-arm64-cross_10.1.0-3cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-8 libblkid1_2.35.2-6 libbz2-1.0_1.0.8-3 libc-bin_2.30-8 libc-dev-bin_2.30-8 libc6_2.30-8 libc6-arm64-cross_2.30-2cross1 libc6-dev_2.30-8 libc6-dev-arm64-cross_2.30-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libcryptsetup12_2:2.3.3-1 libctf-nobfd0_2.34-8 libctf0_2.34-8 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdebian-dpkgcross-perl_2.6.15-3 libdevmapper1.02.1_2:1.02.167-1+b1 libdpkg-perl_1.20.3 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.2-6 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-14 libgcc-9-dev-arm64-cross_9.3.0-13cross1 libgcc-s1_10.1.0-4 libgcc-s1-arm64-cross_10.1.0-3cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.3-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2 libgomp1_10.1.0-4 libgomp1-arm64-cross_10.1.0-3cross1 libgpg-error0_1.38-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu67_67.1-2 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.1.0-4 libitm1-arm64-cross_10.1.0-3cross1 libjson-c4_0.13.1+dfsg-9 liblocale-gettext-perl_1.07-4 liblsan0_10.1.0-4 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: elph Binary: elph Architecture: any Version: 1.0.1-5 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://www.cbcb.umd.edu/software/ELPH/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/elph Vcs-Git: https://salsa.debian.org/med-team/elph.git Testsuite: autopkgtest Testsuite-Triggers: igor Build-Depends: debhelper-compat (= 13), help2man Package-List: elph deb science optional arch=any Checksums-Sha1: 892ef4811063ac95c11e41eae96c419f7ddafede 37188 elph_1.0.1.orig.tar.xz e55bdb5a9e2e8e381c1adb1826c4cfc54b8cd3bc 4000 elph_1.0.1-5.debian.tar.xz Checksums-Sha256: fd538b86759b9b49e20e415039b130d94e4fed5d7e4bbfa0b2649f650eb806e6 37188 elph_1.0.1.orig.tar.xz 57f74c77519812947a87569ddf262fd3f9a1e3a30f550db501d07958c85d7622 4000 elph_1.0.1-5.debian.tar.xz Files: f77c9c4f47ae4b5cd69c9d78d673ffc4 37188 elph_1.0.1.orig.tar.xz 58e0cfe01d8e39f83d292de9512c41dd 4000 elph_1.0.1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl77X44UHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafEsKBAAgYWT1/UaZstj1n0yr7s8GtNEaCJM pNTZlgURpETZGaHuo9M1U5t73fAJGoDy5brFQI5GfeRA6IONPFmZX5wS0CJTAvjh m02LYEtX9rukaOoGUdFD6CVaWHBOKqD7cfsNVCPkUfFzM8D9PtjSzPqWQeV8m/R/ 7uhFBWDSzQIw0EKb0UDSIB+gUuqEm5xp7o/LH0PVDWnT0rxs3TYAamjT3CT1Vmqo asOKtjtyJ75gvQNnVX44QamL9vQLpP/d6ha1nzc/RYxVHwD5+Vo4kUICmtHrTUBa ksiK2waU67TFLACwWHkTN9zunZOTOiG3k2k/UFsqoNkPNp9eOu/zBa2MDhQnVMN6 VGHq76m6Hyqx//AGzuX/+qNffueJbG4y8yEuLOVfZkTwEkRKUaFg1u7uCXp2HVth KX9+O+Z44AzNAgVnuw5ABoXAEgsnK75RcZmcXcXC/qkPV2u67SbVzGg29VAKaOpD T+lIiAsJC6qMeYwFBIjFedcwMplm3ox9Kz31vKCV4J9PLsoKmYKFQUrYYo6tDSAc Olr8DLEY2xrP3uhBONsgwf/V2sdTrv3TZw+hIqqFqAW7cZnn+fmg16qEzWJtVrz+ AXl4V4PqLqCzoF0VyQKuWFis6ctjuTIKZ30tKN0plu6wJvJUUanGfaJ67ZUoRKSz et/EOQ1rOgy36TE= =FVa+ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jun 30 15:51:42 2020 UTC gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./elph_1.0.1-5.dsc dpkg-source: info: extracting elph in /<> dpkg-source: info: unpacking elph_1.0.1.orig.tar.xz dpkg-source: info: unpacking elph_1.0.1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying toplevelmakefile.patch dpkg-source: info: applying reproduciblebuild.patch dpkg-source: info: applying clang.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-17303ac7-d540-4ba0-b10e-ec5dd332ad2a SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package elph dpkg-buildpackage: info: source version 1.0.1-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --sourcedirectory=sources debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean install -d /<>/debian/.debhelper/generated/_source/home /<>/debian/.debhelper/generated/_source/xdg-runtime-dir cd sources && make -j1 clean make[2]: Entering directory '/<>/sources' make[2]: Leaving directory '/<>/sources' rm -f debian/elph.1 make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=sources dh_clean -O--sourcedirectory=sources rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/elph.substvars debian/files rm -fr -- debian/elph/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --sourcedirectory=sources dh_update_autotools_config -a -O--sourcedirectory=sources dh_autoreconf -a -O--sourcedirectory=sources dh_auto_configure -a -O--sourcedirectory=sources install -d /<>/debian/.debhelper/generated/_source/home /<>/debian/.debhelper/generated/_source/xdg-runtime-dir debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dpkg-architecture -f -aamd64 -c dh_auto_build -- LINKER='$(CXX)' cd sources && make -j1 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\) make[2]: Entering directory '/<>/sources' g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c elph.cc -o elph.o In file included from GString.h:8, from elph.cc:5: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from elph.cc:5: GString.h: At global scope: GString.h:128:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ elph.cc: In function ‘int main(int, char**)’: elph.cc:81:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 81 | GArgs args(argc, argv, "ho:abreglvdzxt:p:s:m:n:LEN=ITERNO=MAXLOOP=SGFNO="); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ elph.cc:134:30: warning: ‘info’ may be used uninitialized in this function [-Wmaybe-uninitialized] 134 | globAlignProb=M->optimize(globAlignProb,info,closest); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c motif.cc -o motif.o In file included from GFastaFile.h:3, from motif.h:8, from motif.cc:4: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ motif.cc: In member function ‘double Motif::findMotif(int, int, int, int, int)’: motif.cc:2876:14: warning: variable ‘prevProb’ set but not used [-Wunused-but-set-variable] 2876 | double prevProb=0; | ^~~~~~~~ motif.cc:2878:14: warning: variable ‘locMaxInfo’ set but not used [-Wunused-but-set-variable] 2878 | double locMaxInfo=0; | ^~~~~~~~~~ motif.cc: In member function ‘double Motif::findMDet(int)’: motif.cc:1222:9: warning: ‘maxinfo’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1222 | diff=maxinfo-optinfo; | ~~~~^~~~~~~~~~~~~~~~ motif.cc: In constructor ‘Motif::Motif(const char*, FILE*, seqType, const char*, const char*, int, int, int, int, int)’: motif.cc:1045:29: warning: ‘info’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1045 | globAlignProb=optimize(globAlignProb,info,0); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GBase.cpp -o GBase.o In file included from GBase.cpp:5: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ GBase.cpp: In function ‘char* Gsubstr(const char*, char*, char*)’: GBase.cpp:99:8: warning: ‘subs’ may be used uninitialized in this function [-Wmaybe-uninitialized] 99 | memcpy(subs, str, newlen-1); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GString.cpp -o GString.o In file included from GString.h:8, from GString.cpp:2: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from GString.cpp:2: GString.h: At global scope: GString.h:128:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GArgs.cpp -o GArgs.o In file included from GArgs.cpp:7: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o elph elph.o motif.o GBase.o GString.o GArgs.o make[2]: Leaving directory '/<>/sources' help2man -h "-h" -n ELPH --version-string=1.0.1 --no-discard-stderr sources/elph > debian/elph.1 dh_auto_clean cd sources && make -j1 clean make[2]: Entering directory '/<>/sources' make[2]: Leaving directory '/<>/sources' dh_auto_build -- LINKER='$(CXX)' cd sources && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc LINKER=\$\(CXX\) make[2]: Entering directory '/<>/sources' aarch64-linux-gnu-g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c elph.cc -o elph.o In file included from GString.h:8, from elph.cc:5: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from elph.cc:5: GString.h: At global scope: GString.h:128:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ elph.cc: In function ‘int main(int, char**)’: elph.cc:81:26: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 81 | GArgs args(argc, argv, "ho:abreglvdzxt:p:s:m:n:LEN=ITERNO=MAXLOOP=SGFNO="); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ elph.cc:134:30: warning: ‘info’ may be used uninitialized in this function [-Wmaybe-uninitialized] 134 | globAlignProb=M->optimize(globAlignProb,info,closest); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c motif.cc -o motif.o In file included from GFastaFile.h:3, from motif.h:8, from motif.cc:4: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ motif.cc: In member function ‘double Motif::findMotif(int, int, int, int, int)’: motif.cc:2876:14: warning: variable ‘prevProb’ set but not used [-Wunused-but-set-variable] 2876 | double prevProb=0; | ^~~~~~~~ motif.cc:2878:14: warning: variable ‘locMaxInfo’ set but not used [-Wunused-but-set-variable] 2878 | double locMaxInfo=0; | ^~~~~~~~~~ motif.cc: In member function ‘double Motif::findMDet(int)’: motif.cc:1222:9: warning: ‘maxinfo’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1222 | diff=maxinfo-optinfo; | ~~~~^~~~~~~~~~~~~~~~ motif.cc: In constructor ‘Motif::Motif(const char*, FILE*, seqType, const char*, const char*, int, int, int, int, int)’: motif.cc:1045:29: warning: ‘info’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1045 | globAlignProb=optimize(globAlignProb,info,0); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GBase.cpp -o GBase.o In file included from GBase.cpp:5: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ GBase.cpp: In function ‘char* Gsubstr(const char*, char*, char*)’: GBase.cpp:99:8: warning: ‘subs’ may be used uninitialized in this function [-Wmaybe-uninitialized] 99 | memcpy(subs, str, newlen-1); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GString.cpp -o GString.o In file included from GString.h:8, from GString.cpp:2: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from GString.cpp:2: GString.h: At global scope: GString.h:128:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 128 | GString& trim(char* c=" \t\n\r"); | ^~~~~~~~~ GString.h:129:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 129 | GString& trimR(char* c=" \t\n\r"); //trim only right end | ^~~~~~~~~ GString.h:131:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 131 | GString& trimL(char* c=" \t\n\r"); //trim only left end | ^~~~~~~~~ GString.h:136:51: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096); | ^~~~ aarch64-linux-gnu-g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -fdebug-prefix-map=/<>/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GArgs.cpp -o GArgs.o In file included from GArgs.cpp:7: GBase.h: In function ‘void swap(bool&, bool&)’: GBase.h:119:8: warning: operation on ‘arg1’ may be undefined [-Wsequence-point] 119 | { arg1 ^= arg2 ^= arg1 ^= arg2; } | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -o elph elph.o motif.o GBase.o GString.o GArgs.o make[2]: Leaving directory '/<>/sources' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=sources" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=sources dh_prep -a -O--sourcedirectory=sources rm -f -- debian/elph.substvars rm -fr -- debian/.debhelper/generated/elph/ debian/elph/ debian/tmp/ dh_auto_install -a -O--sourcedirectory=sources install -d /<>/debian/elph dh_install -a -O--sourcedirectory=sources install -d debian/elph/usr/bin cp --reflink=auto -a ./sources/elph debian/elph/usr/bin/ install -d debian/.debhelper/generated/elph dh_installdocs -a -O--sourcedirectory=sources install -d debian/elph/usr/share/doc/elph cp --reflink=auto -a ./debian/README.Debian debian/elph/usr/share/doc/elph cp --reflink=auto -a ./debian/README.source debian/elph/usr/share/doc/elph cp --reflink=auto -a ./README debian/elph/usr/share/doc/elph cp --reflink=auto -a ./Readme.ELPH debian/elph/usr/share/doc/elph chmod -R u\+rw,go=rX debian/elph/usr/share/doc install -p -m0644 debian/README.Debian debian/elph/usr/share/doc/elph/README.Debian install -p -m0644 debian/copyright debian/elph/usr/share/doc/elph/copyright dh_installchangelogs -a -O--sourcedirectory=sources install -p -m0644 debian/changelog debian/elph/usr/share/doc/elph/changelog.Debian dh_installman -a -O--sourcedirectory=sources install -d debian/elph/usr/share/man/man1/ install -p -m0644 ./debian/elph.1 debian/elph/usr/share/man/man1/elph.1 man-recode --to-code UTF-8 --suffix .dh-new debian/elph/usr/share/man/man1/elph.1 mv debian/elph/usr/share/man/man1/elph.1.dh-new debian/elph/usr/share/man/man1/elph.1 chmod 0644 -- debian/elph/usr/share/man/man1/elph.1 dh_installsystemduser -a -O--sourcedirectory=sources dh_perl -a -O--sourcedirectory=sources dh_link -a -O--sourcedirectory=sources dh_strip_nondeterminism -a -O--sourcedirectory=sources dh_compress -a -O--sourcedirectory=sources cd debian/elph chmod a-x usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1 gzip -9nf usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1 cd '/<>' dh_fixperms -a -O--sourcedirectory=sources find debian/elph ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/elph/usr/share/doc -type f -a -true -a ! -regex 'debian/elph/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/elph/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/elph/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a -O--sourcedirectory=sources dh_dwz -a -a -O--sourcedirectory=sources dwz -- debian/elph/usr/bin/elph dh_strip -a -a -O--sourcedirectory=sources install -d debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/43 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/elph/usr/bin/elph debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/43/469f289216780258b8e4b688c932e9dd9cb4ad.debug chmod 0644 -- debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/43/469f289216780258b8e4b688c932e9dd9cb4ad.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/elph/usr/bin/elph aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/43/469f289216780258b8e4b688c932e9dd9cb4ad.debug debian/elph/usr/bin/elph install -d debian/.debhelper/elph/dbgsym-root/usr/share/doc ln -s elph debian/.debhelper/elph/dbgsym-root/usr/share/doc/elph-dbgsym dh_makeshlibs -a -a -O--sourcedirectory=sources rm -f debian/elph/DEBIAN/shlibs dh_shlibdeps -a -a -O--sourcedirectory=sources install -d debian/elph/DEBIAN dpkg-shlibdeps -Tdebian/elph.substvars debian/elph/usr/bin/elph dh_installdeb -a -O--sourcedirectory=sources dh_gencontrol -a -O--sourcedirectory=sources echo misc:Depends= >> debian/elph.substvars echo misc:Pre-Depends= >> debian/elph.substvars install -d debian/.debhelper/elph/dbgsym-root/DEBIAN dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -Pdebian/.debhelper/elph/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=elph-dbgsym "-DDepends=elph (= \${binary:Version})" "-DDescription=debug symbols for elph" -DBuild-Ids=43469f289216780258b8e4b688c932e9dd9cb4ad -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/control dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -Pdebian/elph chmod 0644 -- debian/elph/DEBIAN/control dh_md5sums -a -O--sourcedirectory=sources cd debian/elph >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/elph/DEBIAN/md5sums cd debian/.debhelper/elph/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--sourcedirectory=sources dpkg-deb --root-owner-group --build debian/elph .. dpkg-deb: building package 'elph' in '../elph_1.0.1-5_arm64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/elph/dbgsym-root .. dpkg-deb: building package 'elph-dbgsym' in '../elph-dbgsym_1.0.1-5_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../elph_1.0.1-5_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-07-01T08:38:58Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ elph_1.0.1-5_arm64.changes: --------------------------- Format: 1.8 Date: Tue, 30 Jun 2020 20:41:48 +0530 Source: elph Binary: elph elph-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.0.1-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: elph - DNA/protein sequence motif finder Changes: elph (1.0.1-5) unstable; urgency=medium . * Team Upload. * compat version: 13 * Add "Rules-Requires-Root:no" * Add autopkgtests * Bump standards version to 4.5.0 * Add salsa-ci.yml 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Source: elph Binary: elph elph-dbgsym Architecture: arm64 Version: 1.0.1-5 Checksums-Md5: db3e90b2ab87345174b91cbec054fe8e 132904 elph-dbgsym_1.0.1-5_arm64.deb 994a3d1df6664bc4cdcd3524e0a26252 47220 elph_1.0.1-5_arm64.deb Checksums-Sha1: 32fd078af06ec20d589e2d1bfae476433e33edc7 132904 elph-dbgsym_1.0.1-5_arm64.deb 5577615bf3434252e02e0201280afb170f46dfb1 47220 elph_1.0.1-5_arm64.deb Checksums-Sha256: e3ca017fb6fb3032bb2211e168015b000367ac77829c0c95aa3507860ceadeaf 132904 elph-dbgsym_1.0.1-5_arm64.deb b0d302d3288709e3bf3890f177892949103ec3c7c25c6ad89fd2eec708f9fb95 47220 elph_1.0.1-5_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 01 Jul 2020 08:38:58 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-8), binutils-common (= 2.34-8), binutils-x86-64-linux-gnu (= 2.34-8), bsdextrautils (= 2.35.2-6), bsdutils (= 1:2.35.2-6), build-essential (= 12.8), bzip2 (= 1.0.8-3), coreutils (= 8.32-2), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-14), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.1-1), diffutils (= 1:3.7-3), dmsetup (= 2:1.02.167-1+b1), dpkg (= 1.20.3), dpkg-dev (= 1.20.3), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-14), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-4), gcc-9 (= 9.3.0-14), gcc-9-base (= 9.3.0-14), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), help2man (= 1.47.15), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libargon2-1 (= 0~20171227-0.2), libasan5 (= 9.3.0-14), libatomic1 (= 10.1.0-4), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-8), libblkid1 (= 2.35.2-6), libbz2-1.0 (= 1.0.8-3), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.1.0-4), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libcryptsetup12 (= 2:2.3.3-1), libctf-nobfd0 (= 2.34-8), libctf0 (= 2.34-8), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13.1), libdevmapper1.02.1 (= 2:1.02.167-1+b1), libdpkg-perl (= 1.20.3), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.1-1), libgcc-9-dev (= 9.3.0-14), libgcc-s1 (= 10.1.0-4), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.3-1), libgmp10 (= 2:6.2.0+dfsg-6), libgomp1 (= 10.1.0-4), libgpg-error0 (= 1.38-1), libicu67 (= 67.1-2), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-4), libjson-c4 (= 0.13.1+dfsg-9), liblocale-gettext-perl (= 1.07-4), liblsan0 (= 10.1.0-4), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.2-6), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10.1.0-4), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.2-6), libssl1.1 (= 1.1.1g-1), libstdc++-9-dev (= 9.3.0-14), libstdc++6 (= 10.1.0-4), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.6-1), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-4), libubsan1 (= 10.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 245.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.35.2-6), libxml2 (= 2.9.10+dfsg-5+b1), linux-libc-dev (= 5.7.6-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.2-6), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1593529908" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ elph-dbgsym_1.0.1-5_arm64.deb ----------------------------- new Debian package, version 2.0. size 132904 bytes: control archive=532 bytes. 358 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: elph-dbgsym Source: elph Version: 1.0.1-5 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 153 Depends: elph (= 1.0.1-5) Section: debug Priority: optional Description: debug symbols for elph Build-Ids: 43469f289216780258b8e4b688c932e9dd9cb4ad drwxr-xr-x root/root 0 2020-06-30 15:11 ./ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/lib/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/lib/debug/.build-id/43/ -rw-r--r-- root/root 146384 2020-06-30 15:11 ./usr/lib/debug/.build-id/43/469f289216780258b8e4b688c932e9dd9cb4ad.debug drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-06-30 15:11 ./usr/share/doc/elph-dbgsym -> elph elph_1.0.1-5_arm64.deb ---------------------- new Debian package, version 2.0. size 47220 bytes: control archive=1024 bytes. 790 bytes, 17 lines control 508 bytes, 8 lines md5sums Package: elph Version: 1.0.1-5 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 126 Depends: libc6 (>= 2.29), libstdc++6 (>= 5) Section: science Priority: optional Homepage: https://www.cbcb.umd.edu/software/ELPH/ Description: DNA/protein sequence motif finder ELPH (Estimated Locations of Pattern Hits) is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. ELPH was used to find patterns such as ribosome binding sites (RBSs) and exon splicing enhancers (ESEs). drwxr-xr-x root/root 0 2020-06-30 15:11 ./ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/bin/ -rwxr-xr-x root/root 109040 2020-06-30 15:11 ./usr/bin/elph drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/doc/elph/ -rw-r--r-- root/root 395 2006-09-28 16:57 ./usr/share/doc/elph/README -rw-r--r-- root/root 404 2020-05-12 12:09 ./usr/share/doc/elph/README.Debian -rw-r--r-- root/root 228 2020-05-12 12:09 ./usr/share/doc/elph/README.source -rw-r--r-- root/root 2403 2006-09-28 17:00 ./usr/share/doc/elph/Readme.ELPH.gz -rw-r--r-- root/root 768 2020-06-30 15:11 ./usr/share/doc/elph/changelog.Debian.gz -rw-r--r-- root/root 951 2020-05-12 12:09 ./usr/share/doc/elph/copyright drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/man/ drwxr-xr-x root/root 0 2020-06-30 15:11 ./usr/share/man/man1/ -rw-r--r-- root/root 1067 2020-06-30 15:11 ./usr/share/man/man1/elph.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [538 B] Get:5 copy:/<>/apt_archive ./ Packages [627 B] Fetched 2128 B in 0s (82.6 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 6807 kB of archives. After this operation, 19.2 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.32.3-1 [753 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 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http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libmetrics-any-perl all 0.05-2 [36.8 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libtest-metrics-any-perl all 0.01-2 [7060 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.77-3 [274 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.21-1 [12.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.014+ds-1 [106 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.014+ds-1 [108 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010002-1 [338 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-3 [89.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.82.0 [1293 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6807 kB in 0s (31.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20381 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.32.3-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.32.3-1) ... Selecting previously unselected package gpg. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 2448 Build-Time: 14 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 19 Job: elph_1.0.1-5 Lintian: pass Machine Architecture: amd64 Package: elph Package-Time: 42 Source-Version: 1.0.1-5 Space: 2448 Status: successful Version: 1.0.1-5 -------------------------------------------------------------------------------- Finished at 2020-07-01T08:38:58Z Build needed 00:00:42, 2448k disk space