sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | fastml 3.1-4 (arm64) Tue, 12 Feb 2019 19:58:49 +0000 | +==============================================================================+ Package: fastml Version: 3.1-4 Source Version: 3.1-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-997d6123-eba6-4fa9-8433-d3f0ce6f5f09' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [243 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-12-0814.56.pdiff [8478 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-12-1413.11.pdiff [33.7 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-12-1413.11.pdiff [33.7 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-12-0814.56.pdiff [16.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-12-1413.11.pdiff [11.7 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-12-1413.11.pdiff [11.7 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8158 kB] Fetched 8527 kB in 2s (4097 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libpam-modules libpam-modules-bin libpam-runtime libpam0g 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 751 kB of archives. After this operation, 62.5 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libpam0g amd64 1.3.1-1 [126 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libpam-modules-bin amd64 1.3.1-1 [106 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libpam-modules amd64 1.3.1-1 [309 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libpam-runtime all 1.3.1-1 [211 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 751 kB in 0s (52.7 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'fastml' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fastml.git Please use: git clone https://salsa.debian.org/med-team/fastml.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 848 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main fastml 3.1-4 (dsc) [1888 B] Get:2 http://debian.oregonstate.edu/debian unstable/main fastml 3.1-4 (tar) [836 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main fastml 3.1-4 (diff) [10.1 kB] Fetched 848 kB in 0s (33.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/fastml-cs4fim/fastml-3.1' with '<>' I: NOTICE: Log filtering will replace 'build/fastml-cs4fim' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-eoZhpb/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-eoZhpb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-eoZhpb/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-eoZhpb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-eoZhpb/apt_archive ./ Sources [362 B] Get:5 copy:/<>/resolver-eoZhpb/apt_archive ./ Packages [452 B] Fetched 1771 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-arm64-cross libgcc1-dbg-arm64-cross libgomp1-dbg-arm64-cross libitm1-dbg-arm64-cross libatomic1-dbg-arm64-cross libasan5-dbg-arm64-cross liblsan0-dbg-arm64-cross libtsan0-dbg-arm64-cross libubsan1-dbg-arm64-cross libmpx2-dbg-arm64-cross libquadmath0-dbg-arm64-cross manpages-dev autoconf automake libtool flex bison gdb-aarch64-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sbuild-build-depends-core-dummy:arm64 sensible-utils ucf 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 161 MB of additional disk space will be used. Get:1 copy:/<>/resolver-eoZhpb/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-2 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-2 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-2 [66.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.31.1-12 [2897 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu-base amd64 8.2.0-20cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-aarch64-linux-gnu amd64 8.2.0-20cross1 [6255 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:8.2.0-2 [16.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.2.0-20cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.28-4cross1 [1312 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-arm64-cross all 1:8.2.0-20cross1 [34.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 8.2.0-20cross1 [66.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 8.2.0-20cross1 [23.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 8.2.0-20cross1 [8616 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 8.2.0-20cross1 [324 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 8.2.0-20cross1 [320 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 8.2.0-20cross1 [116 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 8.2.0-20cross1 [254 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 8.2.0-20cross1 [110 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-arm64-cross all 8.2.0-20cross1 [830 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu amd64 8.2.0-20cross1 [6685 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:8.2.0-2 [1456 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 4.19.13-1cross1 [1193 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.28-4cross1 [2323 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-arm64-cross all 8.2.0-20cross1 [1480 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-aarch64-linux-gnu amd64 8.2.0-20cross1 [6828 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:8.2.0-2 [1176 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0133+dfsg-1 [344 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.5 [6544 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (63.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11871 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-2_amd64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-aarch64-linux-gnu. Preparing to unpack .../06-binutils-aarch64-linux-gnu_2.31.1-12_amd64.deb ... Unpacking binutils-aarch64-linux-gnu (2.31.1-12) ... Selecting previously unselected package gcc-8-aarch64-linux-gnu-base:amd64. Preparing to unpack .../07-gcc-8-aarch64-linux-gnu-base_8.2.0-20cross1_amd64.deb ... Unpacking gcc-8-aarch64-linux-gnu-base:amd64 (8.2.0-20cross1) ... Selecting previously unselected package cpp-8-aarch64-linux-gnu. Preparing to unpack .../08-cpp-8-aarch64-linux-gnu_8.2.0-20cross1_amd64.deb ... Unpacking cpp-8-aarch64-linux-gnu (8.2.0-20cross1) ... Selecting previously unselected package cpp-aarch64-linux-gnu. Preparing to unpack .../09-cpp-aarch64-linux-gnu_4%3a8.2.0-2_amd64.deb ... Unpacking cpp-aarch64-linux-gnu (4:8.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. Preparing to unpack .../11-gcc-8-cross-base_8.2.0-20cross1_all.deb ... Unpacking gcc-8-cross-base (8.2.0-20cross1) ... Selecting previously unselected package libc6-arm64-cross. Preparing to unpack .../12-libc6-arm64-cross_2.28-4cross1_all.deb ... Unpacking libc6-arm64-cross (2.28-4cross1) ... Selecting previously unselected package libgcc1-arm64-cross. Preparing to unpack .../13-libgcc1-arm64-cross_1%3a8.2.0-20cross1_all.deb ... Unpacking libgcc1-arm64-cross (1:8.2.0-20cross1) ... Selecting previously unselected package libgomp1-arm64-cross. Preparing to unpack .../14-libgomp1-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libgomp1-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libitm1-arm64-cross. Preparing to unpack .../15-libitm1-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libitm1-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libatomic1-arm64-cross. Preparing to unpack .../16-libatomic1-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libatomic1-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libstdc++6-arm64-cross. Preparing to unpack .../17-libstdc++6-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libstdc++6-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libasan5-arm64-cross. Preparing to unpack .../18-libasan5-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libasan5-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package liblsan0-arm64-cross. Preparing to unpack .../19-liblsan0-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking liblsan0-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libtsan0-arm64-cross. Preparing to unpack .../20-libtsan0-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libtsan0-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package libubsan1-arm64-cross. 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Preparing to unpack .../26-libc6-dev-arm64-cross_2.28-4cross1_all.deb ... Unpacking libc6-dev-arm64-cross (2.28-4cross1) ... Selecting previously unselected package libstdc++-8-dev-arm64-cross. Preparing to unpack .../27-libstdc++-8-dev-arm64-cross_8.2.0-20cross1_all.deb ... Unpacking libstdc++-8-dev-arm64-cross (8.2.0-20cross1) ... Selecting previously unselected package g++-8-aarch64-linux-gnu. Preparing to unpack .../28-g++-8-aarch64-linux-gnu_8.2.0-20cross1_amd64.deb ... Unpacking g++-8-aarch64-linux-gnu (8.2.0-20cross1) ... Selecting previously unselected package g++-aarch64-linux-gnu. Preparing to unpack .../29-g++-aarch64-linux-gnu_4%3a8.2.0-2_amd64.deb ... Unpacking g++-aarch64-linux-gnu (4:8.2.0-2) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../30-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../31-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../32-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../33-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../34-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../35-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../36-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../37-libxml-libxml-perl_2.0133+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0133+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../38-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../39-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../40-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../41-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../42-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../43-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../44-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-arm64. Preparing to unpack .../45-crossbuild-essential-arm64_12.5_all.deb ... Unpacking crossbuild-essential-arm64 (12.5) ... Selecting previously unselected package sbuild-build-depends-core-dummy:arm64. Preparing to unpack .../46-sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy:arm64 (0.invalid.0) ... Setting up gcc-8-cross-base (8.2.0-20cross1) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libfile-which-perl (1.23-1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libyaml-perl (1.27-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up libmagic-mgc (1:5.35-2) ... Setting up libmagic1:amd64 (1:5.35-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up sensible-utils (0.0.12) ... Setting up gcc-8-aarch64-linux-gnu-base:amd64 (8.2.0-20cross1) ... Setting up libc6-arm64-cross (2.28-4cross1) ... Setting up cross-config (2.6.15-2) ... Setting up binutils-aarch64-linux-gnu (2.31.1-12) ... Setting up libgomp1-arm64-cross (8.2.0-20cross1) ... Setting up linux-libc-dev-arm64-cross (4.19.13-1cross1) ... Setting up libgcc1-arm64-cross (1:8.2.0-20cross1) ... Setting up libio-string-perl (1.08-3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-aarch64-linux-gnu (8.2.0-20cross1) ... Setting up libatomic1-arm64-cross (8.2.0-20cross1) ... Setting up libstdc++6-arm64-cross (8.2.0-20cross1) ... Setting up file (1:5.35-2) ... Setting up libtsan0-arm64-cross (8.2.0-20cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up libitm1-arm64-cross (8.2.0-20cross1) ... Setting up libc6-dev-arm64-cross (2.28-4cross1) ... Setting up cpp-aarch64-linux-gnu (4:8.2.0-2) ... Setting up libubsan1-arm64-cross (8.2.0-20cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up liblsan0-arm64-cross (8.2.0-20cross1) ... Setting up libasan5-arm64-cross (8.2.0-20cross1) ... Setting up libgcc-8-dev-arm64-cross (8.2.0-20cross1) ... Setting up libxml-libxml-perl (2.0133+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-arm64-cross (8.2.0-20cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-8-aarch64-linux-gnu (8.2.0-20cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up g++-8-aarch64-linux-gnu (8.2.0-20cross1) ... Setting up gcc-aarch64-linux-gnu (4:8.2.0-2) ... Setting up g++-aarch64-linux-gnu (4:8.2.0-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-arm64 (12.5) ... Setting up sbuild-build-depends-core-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-eoZhpb/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-eoZhpb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-eoZhpb/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-eoZhpb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-eoZhpb/apt_archive ./ Sources [484 B] Get:5 copy:/<>/resolver-eoZhpb/apt_archive ./ Packages [570 B] Fetched 2017 B in 0s (186 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:arm64 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-eoZhpb/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:arm64. (Reading database ... 15151 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) dpkg-deb: building package 'sbuild-build-depends-fastml-dummy' in '/<>/resolver-eoZhpb/apt_archive/sbuild-build-depends-fastml-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-fastml-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-eoZhpb/apt_archive ./ InRelease Get:2 copy:/<>/resolver-eoZhpb/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-eoZhpb/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-eoZhpb/apt_archive ./ Sources [632 B] Get:5 copy:/<>/resolver-eoZhpb/apt_archive ./ Packages [709 B] Fetched 2304 B in 0s (132 kB/s) Reading package lists... Reading package lists... Install fastml build dependencies (apt-based resolver) ------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libatomic1:arm64 libbsd0 libc6:arm64 libc6-dev:arm64 libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libglib2.0-0 libgomp1:arm64 libitm1:arm64 liblsan0:arm64 libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:arm64 libstdc++6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 linux-libc-dev:arm64 m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 manpages-dev:arm64 libstdc++-8-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:arm64 libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:arm64 libatomic1:arm64 libbsd0 libc6:arm64 libc6-dev:arm64 libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libglib2.0-0 libgomp1:arm64 libitm1:arm64 liblsan0:arm64 libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:arm64 libstdc++6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 linux-libc-dev:arm64 m4 man-db po-debconf sbuild-build-depends-fastml-dummy:arm64 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After this operation, 92.7 MB of additional disk space will be used. Get:1 copy:/<>/resolver-eoZhpb/apt_archive ./ sbuild-build-depends-fastml-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-1 [99.3 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-9 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.0-1 [12.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.175-2 [160 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1 [1015 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-8-base arm64 8.2.0-20 [189 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc1 arm64 1:8.2.0-20 [34.2 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.28-7 [2521 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 8.2.0-20 [361 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 8.2.0-20 [326 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 8.2.0-20 [8812 B] Get:35 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 4.19.16-1 [1110 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.28-7 [2324 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 8.2.0-20 [67.8 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 8.2.0-20 [24.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 8.2.0-20 [117 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 8.2.0-20 [261 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 8.2.0-20 [110 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-8-dev arm64 8.2.0-20 [825 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-8-dev arm64 8.2.0-20 [1498 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.4 MB in 0s (56.8 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15151 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.175-2_amd64.deb ... Unpacking libelf1:amd64 (0.175-2) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../21-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../22-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../23-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../25-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../26-debhelper_12.1_all.deb ... Unpacking debhelper (12.1) ... Selecting previously unselected package gcc-8-base:arm64. Preparing to unpack .../27-gcc-8-base_8.2.0-20_arm64.deb ... Unpacking gcc-8-base:arm64 (8.2.0-20) ... Selecting previously unselected package libgcc1:arm64. Preparing to unpack .../28-libgcc1_1%3a8.2.0-20_arm64.deb ... Unpacking libgcc1:arm64 (1:8.2.0-20) ... Selecting previously unselected package libc6:arm64. Preparing to unpack .../29-libc6_2.28-7_arm64.deb ... Unpacking libc6:arm64 (2.28-7) ... Selecting previously unselected package libstdc++6:arm64. Preparing to unpack .../30-libstdc++6_8.2.0-20_arm64.deb ... Unpacking libstdc++6:arm64 (8.2.0-20) ... Selecting previously unselected package libasan5:arm64. 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Setting up libarchive-zip-perl (1.64-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libelf1:amd64 (0.175-2) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:arm64 (4.19.16-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up gcc-8-base:arm64 (8.2.0-20) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libfile-stripnondeterminism-perl (1.1.0-1) ... Setting up libtool (2.4.6-9) ... Setting up gettext (0.19.8.1-9) ... Setting up groff-base (1.22.4-2) ... Setting up autoconf (2.69-11) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up po-debconf (1.0.21) ... Setting up libc6:arm64 (2.28-7) ... Setting up libc6-dev:arm64 (2.28-7) ... Setting up libitm1:arm64 (8.2.0-20) ... Setting up libgcc1:arm64 (1:8.2.0-20) ... Setting up libgomp1:arm64 (8.2.0-20) ... Setting up libatomic1:arm64 (8.2.0-20) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up libstdc++6:arm64 (8.2.0-20) ... Setting up libasan5:arm64 (8.2.0-20) ... Setting up libubsan1:arm64 (8.2.0-20) ... Setting up debhelper (12.1) ... Setting up libtsan0:arm64 (8.2.0-20) ... Setting up liblsan0:arm64 (8.2.0-20) ... Setting up libgcc-8-dev:arm64 (8.2.0-20) ... Setting up libstdc++-8-dev:arm64 (8.2.0-20) ... Setting up sbuild-build-depends-fastml-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-12 dpkg-dev_1.19.4 g++-8_8.2.0-20 gcc-8_8.2.0-20 libc6-dev_2.28-7 libstdc++-8-dev_8.2.0-20 libstdc++-8-dev-arm64-cross_8.2.0-20cross1 libstdc++6_8.2.0-20 libstdc++6-arm64-cross_8.2.0-20cross1 linux-libc-dev_4.19.16-1 Package versions: adduser_3.118 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-12 binutils-aarch64-linux-gnu_2.31.1-12 binutils-common_2.31.1-12 binutils-x86-64-linux-gnu_2.31.1-12 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 coreutils_8.30-1 cpp_4:8.2.0-2 cpp-8_8.2.0-20 cpp-8-aarch64-linux-gnu_8.2.0-20cross1 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libasan5-arm64-cross_8.2.0-20cross1 libatomic1_8.2.0-20 libatomic1-arm64-cross_8.2.0-20cross1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-12 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-7 libc-dev-bin_2.28-7 libc6_2.28-7 libc6-arm64-cross_2.28-4cross1 libc6-dev_2.28-7 libc6-dev-arm64-cross_2.28-4cross1 libcap-ng0_0.7.9-2 libcc1-0_8.2.0-20 libcom-err2_1.44.5-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.3 libdebconfclient0_0.247 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.4 libelf1_0.175-2 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.0-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.2.0-20 libgcc-8-dev-arm64-cross_8.2.0-20cross1 libgcc1_1:8.2.0-20 libgcc1-arm64-cross_1:8.2.0-20cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-20 libgomp1-arm64-cross_8.2.0-20cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.2.0-20 libitm1-arm64-cross_8.2.0-20cross1 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.2.0-20 liblsan0-arm64-cross_8.2.0-20cross1 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.2.0-20 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.14-2 libpam-modules_1.3.1-1 libpam-modules-bin_1.3.1-1 libpam-runtime_1.3.1-1 libpam0g_1.3.1-1 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libquadmath0_8.2.0-20 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.44.5-1 libstdc++-8-dev_8.2.0-20 libstdc++-8-dev-arm64-cross_8.2.0-20cross1 libstdc++6_8.2.0-20 libstdc++6-arm64-cross_8.2.0-20cross1 libsystemd0_240-5 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libtsan0_8.2.0-20 libtsan0-arm64-cross_8.2.0-20cross1 libubsan1_8.2.0-20 libubsan1-arm64-cross_8.2.0-20cross1 libuchardet0_0.0.6-3 libudev1_240-5 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0133+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.16-1 linux-libc-dev-arm64-cross_4.19.13-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-fastml-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-6 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jul 11 19:30:13 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fastml_3.1-4.dsc dpkg-source: info: extracting fastml in /<> dpkg-source: info: unpacking fastml_3.1.orig.tar.gz dpkg-source: info: unpacking fastml_3.1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gcc_5.patch dpkg-source: info: applying fix_makefile4test.patch dpkg-source: info: applying fix_intall_target.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying change_to_tests_dir_only_if_existing.patch dpkg-source: info: applying skip_failing_tests.patch dpkg-source: info: applying remove-template-depth.patch dpkg-source: info: applying g++-6.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-997d6123-eba6-4fa9-8433-d3f0ce6f5f09 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package fastml dpkg-buildpackage: info: source version 3.1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' cd libs;make clean make[3]: Entering directory '/<>/libs' cd phylogeny && make clean make[4]: Entering directory '/<>/libs/phylogeny' rm -f libEvolTree.a libEvolTreeDebug.a libEvolTreeDoubleRep.a *.o make[4]: Leaving directory '/<>/libs/phylogeny' make[3]: Leaving directory '/<>/libs' cd programs;make clean make[3]: Entering directory '/<>/programs' cd fastml && make clean make[4]: Entering directory '/<>/programs/fastml' rm -f libfastml.a libfastmlDebug.a libfastmlDoubleRep.a fastml fastml.debug fastml.doubleRep *.o make[4]: Leaving directory '/<>/programs/fastml' cd gainLoss && make clean make[4]: Entering directory '/<>/programs/gainLoss' rm -f libgainLoss.a libgainLossDebug.a libgainLossDoubleRep.a gainLoss gainLoss.debug gainLoss.doubleRep *.o make[4]: Leaving directory '/<>/programs/gainLoss' cd indelCoder && make clean make[4]: Entering directory '/<>/programs/indelCoder' rm -f libindelCoder.a libindelCoderDebug.a libindelCoderDoubleRep.a indelCoder indelCoder.debug indelCoder.doubleRep *.o make[4]: Leaving directory '/<>/programs/indelCoder' make[3]: Leaving directory '/<>/programs' make[2]: Leaving directory '/<>' rm -f libs/phylogeny/make.dep \ programs/fastml/make.dep \ programs/gainLoss/make.dep \ programs/indelCoder/make.dep make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[1]: Entering directory '/<>' cd libs;make all make[2]: Entering directory '/<>/libs' cd phylogeny && make all make[3]: Entering directory '/<>/libs/phylogeny' making depend aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o AddLog.o AddLog.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o NNiProp.o NNiProp.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o NNiSep.o NNiSep.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o Nni.o Nni.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o aaJC.o aaJC.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o allTrees.o allTrees.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o allTreesSeparateModel.o allTreesSeparateModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o alphabet.o alphabet.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o amino.o amino.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestAlpha.o bestAlpha.cpp bestAlpha.cpp: In constructor 'bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, const sequenceContainer&, stochasticProcess&, const Vdouble*, double, double, double, double, double, double, double, int, int)': bestAlpha.cpp:371:10: warning: variable 'oldA' set but not used [-Wunused-but-set-variable] MDOUBLE oldA=0; ^~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestAlphaManyTrees.o bestAlphaManyTrees.cpp bestAlphaManyTrees.cpp: In function 'void bestAlpha::optimizeAlphaNG_EM_PROP_n_alpha(tree&, std::vector&, std::vector&, const std::vector*>*, std::vector&, double&, int, double)': bestAlphaManyTrees.cpp:184:10: warning: variable 'ax' set but not used [-Wunused-but-set-variable] MDOUBLE ax,bx,cx; // left, midle, right limit on alpha ^~ bestAlphaManyTrees.cpp:184:13: warning: variable 'bx' set but not used [-Wunused-but-set-variable] MDOUBLE ax,bx,cx; // left, midle, right limit on alpha ^~ bestAlphaManyTrees.cpp:184:16: warning: variable 'cx' set but not used [-Wunused-but-set-variable] MDOUBLE ax,bx,cx; // left, midle, right limit on alpha ^~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestHKYparam.o bestHKYparam.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bootstrap.o bootstrap.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEM.o bblEM.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEMfixRoot.o bblEMfixRoot.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEMProprtional.o bblEMProprtional.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEMProportionalEB.o bblEMProportionalEB.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblLSProportionalEB.o bblLSProportionalEB.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEMSeperate.o bblEMSeperate.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o chebyshevAccelerator.o chebyshevAccelerator.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o clustalFormat.o clustalFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o codon.o codon.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o codonJC.o codonJC.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeCounts.o computeCounts.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeDownAlg.o computeDownAlg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeMarginalAlg.o computeMarginalAlg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computePijComponent.o computePijComponent.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeUpAlg.o computeUpAlg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeUpAlgFactors.o computeUpAlgFactors.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeSubstitutionCounts.o computeSubstitutionCounts.cpp In file included from computeSubstitutionCounts.cpp:1: computeSubstitutionCounts.h: In constructor 'computeSubstitutionCounts::computeSubstitutionCounts(const sequenceContainer&, const tree&, multipleStochasticProcess*, std::__cxx11::string&, VVVdouble&, int, double, bool)': computeSubstitutionCounts.h:57:12: warning: 'computeSubstitutionCounts::_LpostPerSpPerCat' will be initialized after [-Wreorder] VVVdouble _LpostPerSpPerCat; // _LpostPerSpPerCat[sp][rateCat][pos] ^~~~~~~~~~~~~~~~~ computeSubstitutionCounts.h:53:6: warning: 'int computeSubstitutionCounts::_simulationsIterNum' [-Wreorder] int _simulationsIterNum; ^~~~~~~~~~~~~~~~~~~ computeSubstitutionCounts.cpp:15:1: warning: when initialized here [-Wreorder] computeSubstitutionCounts::computeSubstitutionCounts(const sequenceContainer& sc, const tree& tr, multipleStochasticProcess* MultSpPtr, string& outDir, VVVdouble& LpostPerSpPerCat, const int simulationsIterNum, const MDOUBLE probCutOffSum, bool isSilent): ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from computeSubstitutionCounts.cpp:1: computeSubstitutionCounts.h:54:10: warning: 'computeSubstitutionCounts::_probCutOffSum' will be initialized after [-Wreorder] MDOUBLE _probCutOffSum; ^~~~~~~~~~~~~~ computeSubstitutionCounts.h:52:7: warning: 'bool computeSubstitutionCounts::_isSilent' [-Wreorder] bool _isSilent; ^~~~~~~~~ computeSubstitutionCounts.cpp:15:1: warning: when initialized here [-Wreorder] computeSubstitutionCounts::computeSubstitutionCounts(const sequenceContainer& sc, const tree& tr, multipleStochasticProcess* MultSpPtr, string& outDir, VVVdouble& LpostPerSpPerCat, const int simulationsIterNum, const MDOUBLE probCutOffSum, bool isSilent): ^~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computePosteriorExpectationOfSubstitutions.o computePosteriorExpectationOfSubstitutions.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computePosteriorExpectationOfSubstitutions_nonReversibleSp.o computePosteriorExpectationOfSubstitutions_nonReversibleSp.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o ConversionUtils.o ConversionUtils.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o countTableComponent.o countTableComponent.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o datMatrixHolder.o datMatrixHolder.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o distanceTable.o distanceTable.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o distribution.o distribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o errorMsg.o errorMsg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o evaluateCharacterFreq.o evaluateCharacterFreq.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fastStartTree.o fastStartTree.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fastaFormat.o fastaFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o findRateOfGene.o findRateOfGene.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistance.o fromCountTableComponentToDistance.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistancefixRoot.o fromCountTableComponentToDistancefixRoot.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistanceProp.o fromCountTableComponentToDistanceProp.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistancePropEB.o fromCountTableComponentToDistancePropEB.cpp In file included from fromCountTableComponentToDistancePropEB.cpp:3: fromCountTableComponentToDistancePropEB.h: In constructor 'fromCountTableComponentToDistancePropEB::fromCountTableComponentToDistancePropEB(const std::vector >&, int, multipleStochasticProcess*, const gammaDistribution*, double, double)': fromCountTableComponentToDistancePropEB.h:29:12: warning: 'fromCountTableComponentToDistancePropEB::_nodeID' will be initialized after [-Wreorder] const int _nodeID; ^~~~~~~ fromCountTableComponentToDistancePropEB.h:28:27: warning: 'const gammaDistribution* fromCountTableComponentToDistancePropEB::_pProportionDist' [-Wreorder] const gammaDistribution* _pProportionDist; ^~~~~~~~~~~~~~~~ fromCountTableComponentToDistancePropEB.cpp:6:1: warning: when initialized here [-Wreorder] fromCountTableComponentToDistancePropEB::fromCountTableComponentToDistancePropEB( ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromQtoPt.o fromQtoPt.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o generalGammaDistributionFixedCategories.o generalGammaDistributionFixedCategories.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gammaDistribution.o gammaDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gammaUtilities.o gammaUtilities.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o generalGammaDistribution.o generalGammaDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o getRandomWeights.o getRandomWeights.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o goldmanYangModel.o goldmanYangModel.cpp goldmanYangModel.cpp: In constructor 'goldmanYangModel::goldmanYangModel(double, double, codon&, bool)': goldmanYangModel.cpp:8:1: warning: 'goldmanYangModel::_globalV' is initialized with itself [-Winit-self] goldmanYangModel::goldmanYangModel(const MDOUBLE inV, const MDOUBLE inK,codon & inCodonAlph, const bool globalV): ^~~~~~~~~~~~~~~~ goldmanYangModel.cpp: In constructor 'goldmanYangModel::goldmanYangModel(double, double, codon&, const Vdouble&, bool)': goldmanYangModel.cpp:18:1: warning: 'goldmanYangModel::_globalV' is initialized with itself [-Winit-self] goldmanYangModel::goldmanYangModel(const MDOUBLE inV, const MDOUBLE inK, codon & inCodonAlph,const Vdouble& freq,const bool globalV): ^~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o granthamChemicalDistances.o granthamChemicalDistances.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o hky.o hky.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateWithDependence.o simulateWithDependence.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o KH_calculation.o KH_calculation.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDist.o likeDist.cpp likeDist.cpp: In instantiation of 'double myNRmethod(double, double, double, regF, dF, double, int, int&) [with regF = C_evalLikeDist_d; dF = C_evalLikeDist_d2]': likeDist.cpp:274:18: required from here likeDist.cpp:210:13: warning: variable 'oldIntervalSize' set but not used [-Wunused-but-set-variable] MDOUBLE oldIntervalSize = currentIntervalSize; ^~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDistfixRoot.o likeDistfixRoot.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDistProp.o likeDistProp.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDistPropEB.o likeDistPropEB.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likelihoodComputation.o likelihoodComputation.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likelihoodComputationFactors.o likelihoodComputationFactors.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o logFile.o logFile.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o maseFormat.o maseFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o molphyFormat.o molphyFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o nexusFormat.o nexusFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o nj.o nj.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o njConstrain.o njConstrain.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o nucJC.o nucJC.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o nucleotide.o nucleotide.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o numRec.o numRec.cpp numRec.cpp:306:2: warning: "/*" within comment [-Wcomment] //* for (i=1;i>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o Parameters.o Parameters.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o phylipFormat.o phylipFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o pijAccelerator.o pijAccelerator.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o readDatMatrix.o readDatMatrix.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o readTree.o readTree.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o recognizeFormat.o recognizeFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o replacementModel.o replacementModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o searchStatus.o searchStatus.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o seqContainerTreeMap.o seqContainerTreeMap.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o sequence.o sequence.cpp sequence.cpp: In constructor 'sequence::sequence(const sequence&, const alphabet*)': sequence.cpp:76:28: warning: suggest parentheses around '&&' within '||' [-Wparentheses] || (inAlph->size() == 4) && (other._alphabet->size()%4 == 0)) ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o sequenceContainer.o sequenceContainer.cpp sequenceContainer.cpp: In member function 'void sequenceContainer::removeGapPositions()': sequenceContainer.cpp:187:7: warning: variable 'gapCol' set but not used [-Wunused-but-set-variable] bool gapCol; ^~~~~~ sequenceContainer.cpp: In member function 'void sequenceContainer::removeGapPositionsAllSeqs()': sequenceContainer.cpp:199:7: warning: variable 'gapCol' set but not used [-Wunused-but-set-variable] bool gapCol; ^~~~~~ sequenceContainer.cpp: In member function 'int sequenceContainer::getNumOfOccurancesPerPos(int, char)': sequenceContainer.cpp:452:12: warning: unused variable 'len' [-Wunused-variable] const int len = _seqDataVec[0].seqLen(); ^~~ sequenceContainer.cpp: In member function 'std::vector > sequenceContainer::getSeqNamesThatMatchPos(int, char)': sequenceContainer.cpp:467:12: warning: unused variable 'len' [-Wunused-variable] const int len = _seqDataVec[0].seqLen(); ^~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateTree.o simulateTree.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o siteSpecificRate.o siteSpecificRate.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o someUtil.o someUtil.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o split.o split.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o splitMap.o splitMap.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o splitTreeUtil.o splitTreeUtil.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o stochasticProcess.o stochasticProcess.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o suffStatComponent.o suffStatComponent.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o talRandom.o talRandom.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o tree.o tree.cpp tree.cpp: In constructor 'tree::tree(const string&)': tree.cpp:180:4: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (in.is_open()) ^~ tree.cpp:182:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' create_names_to_internal_nodes(); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o treeIt.o treeIt.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o treeUtil.o treeUtil.cpp treeUtil.cpp: In function 'std::vector getNexusTreesFromFile(const string&)': treeUtil.cpp:371:25: warning: variable 'itStrStart' set but not used [-Wunused-but-set-variable] string::const_iterator itStrStart = it->begin(); ^~~~~~~~~~ treeUtil.cpp:372:25: warning: variable 'itStrEnd' set but not used [-Wunused-but-set-variable] string::const_iterator itStrEnd = it->end(); ^~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o uniDistribution.o uniDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o uniformDistribution.o uniformDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o cmdline2EvolObjs.o cmdline2EvolObjs.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o generalGammaDistributionLaguerre.o generalGammaDistributionLaguerre.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gammaDistributionLaguerre.o gammaDistributionLaguerre.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o GLaguer.o GLaguer.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o givenRatesMLDistance.o givenRatesMLDistance.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o distanceBasedSeqs2Tree.o distanceBasedSeqs2Tree.cpp In file included from distanceBasedSeqs2Tree.cpp:12: bestGtrModelParams.h: In constructor 'C_evalGTRParamProportional::C_evalGTRParamProportional(GTRParam, const tree&, const sequenceContainer&, stochasticProcess&, const gammaDistribution*, const Vdouble*)': bestGtrModelParams.h:175:21: warning: 'C_evalGTRParamProportional::_sp' will be initialized after [-Wreorder] stochasticProcess& _sp; ^~~ bestGtrModelParams.h:173:27: warning: 'const gammaDistribution* C_evalGTRParamProportional::_pProportionDist' [-Wreorder] const gammaDistribution* _pProportionDist; ^~~~~~~~~~~~~~~~ bestGtrModelParams.h:162:3: warning: when initialized here [-Wreorder] C_evalGTRParamProportional( const GTRParam param, ^~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o posteriorDistance.o posteriorDistance.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o pairwiseGammaDistance.o pairwiseGammaDistance.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o doubleRep.o doubleRep.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o logRep.o logRep.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o indel.o indel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o indelModel.o indelModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o mulAlphabet.o mulAlphabet.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o replacementModelSSRV.o replacementModelSSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o stochasticProcessSSRV.o stochasticProcessSSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestAlphaAndNu.o bestAlphaAndNu.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o C_evalParamUSSRV.o C_evalParamUSSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o matrixUtils.o matrixUtils.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o betaOmegaDistribution.o betaOmegaDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o betaUtilities.o betaUtilities.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o betaDistribution.o betaDistribution.cpp In file included from betaDistribution.cpp:3: betaDistribution.h: In copy constructor 'betaDistribution::betaDistribution(const betaDistribution&)': betaDistribution.h:54:18: warning: 'betaDistribution::_boundary' will be initialized after [-Wreorder] vector _boundary; ^~~~~~~~~ betaDistribution.h:47:10: warning: 'double betaDistribution::_alpha' [-Wreorder] MDOUBLE _alpha; ^~~~~~ betaDistribution.cpp:23:1: warning: when initialized here [-Wreorder] betaDistribution::betaDistribution(const betaDistribution& other) : ^~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o geneticCodeHolder.o geneticCodeHolder.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o samplingSequences.o samplingSequences.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEM2USSRV.o bblEM2USSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestParamUSSRV.o bestParamUSSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDist2USSRV.o likeDist2USSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o ussrvModel.o ussrvModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likelihoodComputation2USSRV.o likelihoodComputation2USSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistance2USSRV.o fromCountTableComponentToDistance2USSRV.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o normalDist.o normalDist.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o tamura92.o tamura92.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestTamura92param.o bestTamura92param.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o phylipSequentialFormat.o phylipSequentialFormat.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateCodonsJumps.o simulateCodonsJumps.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateJumpsAbstract.o simulateJumpsAbstract.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o ssrvDistanceSeqs2Tree.o ssrvDistanceSeqs2Tree.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o multipleStochasticProcess.o multipleStochasticProcess.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o distributionPlusInvariant.o distributionPlusInvariant.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o extremeValDistribution.o extremeValDistribution.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gammaDistributionFixedCategories.o gammaDistributionFixedCategories.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o generalGammaDistributionPlusInvariant.o generalGammaDistributionPlusInvariant.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gammaDistributionPlusInvariant.o gammaDistributionPlusInvariant.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o distributionPlusCategory.o distributionPlusCategory.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateJumps.o simulateJumps.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o computeJumps.o computeJumps.cpp In file included from computeJumps.cpp:1: computeJumps.h: In constructor 'computeJumps::gFunc::gFunc(double, double, double)': computeJumps.h:59:11: warning: 'computeJumps::gFunc::_Lambda2' will be initialized after [-Wreorder] MDOUBLE _Lambda2; ^~~~~~~~ computeJumps.h:57:11: warning: 'double computeJumps::gFunc::_r' [-Wreorder] MDOUBLE _r; ^~ computeJumps.cpp:256:1: warning: when initialized here [-Wreorder] computeJumps::gFunc::gFunc(const MDOUBLE Lambda1, const MDOUBLE Lambda2 , const MDOUBLE r) ^~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o seqeuncesFilter.o seqeuncesFilter.cpp seqeuncesFilter.cpp: In static member function 'static void seqeuncesFilter::removeShortAndLongSequences(sequenceContainer&, int, int)': seqeuncesFilter.cpp:141:18: warning: unused variable 'pAlph' [-Wunused-variable] const alphabet* pAlph = sc.getAlphabet(); ^~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o optGammaMixtureLS.o optGammaMixtureLS.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o mixtureDistribution.o mixtureDistribution.cpp mixtureDistribution.cpp: In member function 'virtual const double mixtureDistribution::rates(int) const': mixtureDistribution.cpp:210:6: warning: 'componentNum' may be used uninitialized in this function [-Wmaybe-uninitialized] int componentNum, categoryInComponent, totalCat = 0; ^~~~~~~~~~~~ mixtureDistribution.cpp: In member function 'virtual const double mixtureDistribution::ratesProb(int) const': mixtureDistribution.cpp:228:6: warning: 'componentNum' may be used uninitialized in this function [-Wmaybe-uninitialized] int componentNum, categoryInComponent, totalCat = 0; ^~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o suffStatGammaMixture.o suffStatGammaMixture.cpp suffStatGammaMixture.cpp: In member function 'void suffStatGammaMixture::computeStatistics()': suffStatGammaMixture.cpp:123:12: warning: variable 'Exp_Rk' set but not used [-Wunused-but-set-variable] MDOUBLE Exp_Rk, Exp_LogRk, sum; ^~~~~~ suffStatGammaMixture.cpp: In member function 'double suffStatGammaMixture::computeQ()': suffStatGammaMixture.cpp:224:11: warning: unused variable 'first' [-Wunused-variable] MDOUBLE first = _MkVec[comp] * log(P_k); ^~~~~ suffStatGammaMixture.cpp:225:11: warning: unused variable 'second' [-Wunused-variable] MDOUBLE second = _MkVec[comp] * alpha_k*log(beta_k); ^~~~~~ suffStatGammaMixture.cpp:226:11: warning: unused variable 'third' [-Wunused-variable] MDOUBLE third = -_MkVec[comp] * gammln(alpha_k); ^~~~~ suffStatGammaMixture.cpp:227:11: warning: unused variable 'fourth' [-Wunused-variable] MDOUBLE fourth = -_AkVec[comp]*beta_k; ^~~~~~ suffStatGammaMixture.cpp:228:11: warning: unused variable 'fifth' [-Wunused-variable] MDOUBLE fifth = _BkVec[comp]*(alpha_k-1.0); ^~~~~ suffStatGammaMixture.cpp:216:10: warning: variable 'res2' set but not used [-Wunused-but-set-variable] MDOUBLE res2 = 0.0; ^~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o GamMixtureOptimizer.o GamMixtureOptimizer.cpp In file included from GamMixtureOptimizer.cpp:3: optGammaMixtureEM.h: In member function 'double C_evalAlphaEM::diGammaPlus(double) const': optGammaMixtureEM.h:76:11: warning: unused variable 'res1' [-Wunused-variable] MDOUBLE res1 = log(x) + (1/(2*x)) - (1/(12*x*x)) + (1/(120*pow(x, 4))) - (1/(252*pow(x, 6))); ^~~~ optGammaMixtureEM.h: In member function 'double C_evalAlphaEM::diGamma(double) const': optGammaMixtureEM.h:87:11: warning: unused variable 'debugRes' [-Wunused-variable] MDOUBLE debugRes = log(x) - (1/(2*x)) - (1/(12*x*x)) + (1/(120*pow(x, 4))) - (1/(252*pow(x, 6))) + (1/(240*pow(x, 8))) - (1/(132*pow(x, 10))); ^~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o optGammaMixtureEM.o optGammaMixtureEM.cpp In file included from optGammaMixtureEM.cpp:1: optGammaMixtureEM.h: In member function 'double C_evalAlphaEM::diGammaPlus(double) const': optGammaMixtureEM.h:76:11: warning: unused variable 'res1' [-Wunused-variable] MDOUBLE res1 = log(x) + (1/(2*x)) - (1/(12*x*x)) + (1/(120*pow(x, 4))) - (1/(252*pow(x, 6))); ^~~~ optGammaMixtureEM.h: In member function 'double C_evalAlphaEM::diGamma(double) const': optGammaMixtureEM.h:87:11: warning: unused variable 'debugRes' [-Wunused-variable] MDOUBLE debugRes = log(x) - (1/(2*x)) - (1/(12*x*x)) + (1/(120*pow(x, 4))) - (1/(252*pow(x, 6))) + (1/(240*pow(x, 8))) - (1/(132*pow(x, 10))); ^~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gainLossAlphabet.o gainLossAlphabet.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o wYangModel.o wYangModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o codonUtils.o codonUtils.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likelihoodComputation2Codon.o likelihoodComputation2Codon.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likeDist2Codon.o likeDist2Codon.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o unObservableData.o unObservableData.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o likelihoodComputationGL.o likelihoodComputationGL.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o threeStateModel.o threeStateModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o threeStateAlphabet.o threeStateAlphabet.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o oneTwoMoreModel.o oneTwoMoreModel.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o betaDistributionFixedCategories.o betaDistributionFixedCategories.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o betaDistributionFixedCategoriesWithOmegaUniform.o betaDistributionFixedCategoriesWithOmegaUniform.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bblEM2codon.o bblEM2codon.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestAlphaAndK.o bestAlphaAndK.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o fromCountTableComponentToDistance2Codon.o fromCountTableComponentToDistance2Codon.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o gtrModel.o gtrModel.cpp In file included from gtrModel.cpp:1: gtrModel.h: In constructor 'gtrModel::gtrModel(const Vdouble&, double, double, double, double, double, double)': gtrModel.h:54:10: warning: 'gtrModel::_g2t' will be initialized after [-Wreorder] MDOUBLE _g2t; ^~~~ gtrModel.h:47:10: warning: 'Vdouble gtrModel::_freq' [-Wreorder] Vdouble _freq; ^~~~~ gtrModel.cpp:5:1: warning: when initialized here [-Wreorder] gtrModel::gtrModel(const Vdouble& freq, ^~~~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_a2c() const': gtrModel.cpp:139:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_a2g() const': gtrModel.cpp:153:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_a2t() const': gtrModel.cpp:167:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_c2g() const': gtrModel.cpp:181:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_c2t() const': gtrModel.cpp:195:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ gtrModel.cpp: In member function 'double gtrModel::get_g2t() const': gtrModel.cpp:209:9: warning: 'result' may be used uninitialized in this function [-Wmaybe-uninitialized] return result; ^~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o bestGtrModelParams.o bestGtrModelParams.cpp In file included from bestGtrModelParams.cpp:3: bestGtrModelParams.h: In constructor 'C_evalGTRParamProportional::C_evalGTRParamProportional(GTRParam, const tree&, const sequenceContainer&, stochasticProcess&, const gammaDistribution*, const Vdouble*)': bestGtrModelParams.h:175:21: warning: 'C_evalGTRParamProportional::_sp' will be initialized after [-Wreorder] stochasticProcess& _sp; ^~~ bestGtrModelParams.h:173:27: warning: 'const gammaDistribution* C_evalGTRParamProportional::_pProportionDist' [-Wreorder] const gammaDistribution* _pProportionDist; ^~~~~~~~~~~~~~~~ bestGtrModelParams.h:162:3: warning: when initialized here [-Wreorder] C_evalGTRParamProportional( const GTRParam param, ^~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o simulateRateShiftJumps.o simulateRateShiftJumps.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -DLOG -c -o integerAlphabet.o integerAlphabet.cpp ar rv libEvolTree.a AddLog.o NNiProp.o NNiSep.o Nni.o aaJC.o allTrees.o allTreesSeparateModel.o alphabet.o amino.o bestAlpha.o bestAlphaManyTrees.o bestHKYparam.o bootstrap.o bblEM.o bblEMfixRoot.o bblEMProprtional.o bblEMProportionalEB.o bblLSProportionalEB.o bblEMSeperate.o chebyshevAccelerator.o clustalFormat.o codon.o codonJC.o computeCounts.o computeDownAlg.o computeMarginalAlg.o computePijComponent.o computeUpAlg.o computeUpAlgFactors.o computeSubstitutionCounts.o computePosteriorExpectationOfSubstitutions.o computePosteriorExpectationOfSubstitutions_nonReversibleSp.o ConversionUtils.o countTableComponent.o datMatrixHolder.o distanceTable.o distribution.o errorMsg.o evaluateCharacterFreq.o fastStartTree.o fastaFormat.o findRateOfGene.o fromCountTableComponentToDistance.o fromCountTableComponentToDistancefixRoot.o fromCountTableComponentToDistanceProp.o fromCountTableComponentToDistancePropEB.o fromQtoPt.o generalGammaDistributionFixedCategories.o gammaDistribution.o gammaUtilities.o generalGammaDistribution.o getRandomWeights.o goldmanYangModel.o granthamChemicalDistances.o hky.o simulateWithDependence.o KH_calculation.o likeDist.o likeDistfixRoot.o likeDistProp.o likeDistPropEB.o likelihoodComputation.o likelihoodComputationFactors.o logFile.o maseFormat.o molphyFormat.o nexusFormat.o nj.o njConstrain.o nucJC.o nucleotide.o numRec.o Parameters.o phylipFormat.o pijAccelerator.o readDatMatrix.o readTree.o recognizeFormat.o replacementModel.o searchStatus.o seqContainerTreeMap.o sequence.o sequenceContainer.o simulateTree.o siteSpecificRate.o someUtil.o split.o splitMap.o splitTreeUtil.o stochasticProcess.o suffStatComponent.o talRandom.o tree.o treeIt.o treeUtil.o uniDistribution.o uniformDistribution.o cmdline2EvolObjs.o generalGammaDistributionLaguerre.o gammaDistributionLaguerre.o GLaguer.o givenRatesMLDistance.o distanceBasedSeqs2Tree.o posteriorDistance.o pairwiseGammaDistance.o doubleRep.o logRep.o indel.o indelModel.o mulAlphabet.o replacementModelSSRV.o stochasticProcessSSRV.o bestAlphaAndNu.o C_evalParamUSSRV.o matrixUtils.o betaOmegaDistribution.o betaUtilities.o betaDistribution.o geneticCodeHolder.o samplingSequences.o bblEM2USSRV.o bestParamUSSRV.o likeDist2USSRV.o ussrvModel.o likelihoodComputation2USSRV.o fromCountTableComponentToDistance2USSRV.o normalDist.o tamura92.o bestTamura92param.o phylipSequentialFormat.o simulateCodonsJumps.o simulateJumpsAbstract.o ssrvDistanceSeqs2Tree.o multipleStochasticProcess.o distributionPlusInvariant.o extremeValDistribution.o gammaDistributionFixedCategories.o generalGammaDistributionPlusInvariant.o gammaDistributionPlusInvariant.o distributionPlusCategory.o simulateJumps.o computeJumps.o seqeuncesFilter.o optGammaMixtureLS.o mixtureDistribution.o suffStatGammaMixture.o GamMixtureOptimizer.o optGammaMixtureEM.o gainLossAlphabet.o wYangModel.o codonUtils.o likelihoodComputation2Codon.o likeDist2Codon.o unObservableData.o likelihoodComputationGL.o threeStateModel.o threeStateAlphabet.o oneTwoMoreModel.o betaDistributionFixedCategories.o betaDistributionFixedCategoriesWithOmegaUniform.o bblEM2codon.o bestAlphaAndK.o fromCountTableComponentToDistance2Codon.o gtrModel.o bestGtrModelParams.o simulateRateShiftJumps.o integerAlphabet.o ar: creating libEvolTree.a a - AddLog.o a - NNiProp.o a - NNiSep.o a - Nni.o a - aaJC.o a - allTrees.o a - allTreesSeparateModel.o a - alphabet.o a - amino.o a - bestAlpha.o a - bestAlphaManyTrees.o a - bestHKYparam.o a - bootstrap.o a - bblEM.o a - bblEMfixRoot.o a - bblEMProprtional.o a - bblEMProportionalEB.o a - bblLSProportionalEB.o a - bblEMSeperate.o a - chebyshevAccelerator.o a - clustalFormat.o a - codon.o a - codonJC.o a - computeCounts.o a - computeDownAlg.o a - computeMarginalAlg.o a - computePijComponent.o a - computeUpAlg.o a - computeUpAlgFactors.o a - computeSubstitutionCounts.o a - computePosteriorExpectationOfSubstitutions.o a - computePosteriorExpectationOfSubstitutions_nonReversibleSp.o a - ConversionUtils.o a - countTableComponent.o a - datMatrixHolder.o a - distanceTable.o a - distribution.o a - errorMsg.o a - evaluateCharacterFreq.o a - fastStartTree.o a - fastaFormat.o a - findRateOfGene.o a - fromCountTableComponentToDistance.o a - fromCountTableComponentToDistancefixRoot.o a - fromCountTableComponentToDistanceProp.o a - fromCountTableComponentToDistancePropEB.o a - fromQtoPt.o a - generalGammaDistributionFixedCategories.o a - gammaDistribution.o a - gammaUtilities.o a - generalGammaDistribution.o a - getRandomWeights.o a - goldmanYangModel.o a - granthamChemicalDistances.o a - hky.o a - simulateWithDependence.o a - KH_calculation.o a - likeDist.o a - likeDistfixRoot.o a - likeDistProp.o a - likeDistPropEB.o a - likelihoodComputation.o a - likelihoodComputationFactors.o a - logFile.o a - maseFormat.o a - molphyFormat.o a - nexusFormat.o a - nj.o a - njConstrain.o a - nucJC.o a - nucleotide.o a - numRec.o a - Parameters.o a - phylipFormat.o a - pijAccelerator.o a - readDatMatrix.o a - readTree.o a - recognizeFormat.o a - replacementModel.o a - searchStatus.o a - seqContainerTreeMap.o a - sequence.o a - sequenceContainer.o a - simulateTree.o a - siteSpecificRate.o a - someUtil.o a - split.o a - splitMap.o a - splitTreeUtil.o a - stochasticProcess.o a - suffStatComponent.o a - talRandom.o a - tree.o a - treeIt.o a - treeUtil.o a - uniDistribution.o a - uniformDistribution.o a - cmdline2EvolObjs.o a - generalGammaDistributionLaguerre.o a - gammaDistributionLaguerre.o a - GLaguer.o a - givenRatesMLDistance.o a - distanceBasedSeqs2Tree.o a - posteriorDistance.o a - pairwiseGammaDistance.o a - doubleRep.o a - logRep.o a - indel.o a - indelModel.o a - mulAlphabet.o a - replacementModelSSRV.o a - stochasticProcessSSRV.o a - bestAlphaAndNu.o a - C_evalParamUSSRV.o a - matrixUtils.o a - betaOmegaDistribution.o a - betaUtilities.o a - betaDistribution.o a - geneticCodeHolder.o a - samplingSequences.o a - bblEM2USSRV.o a - bestParamUSSRV.o a - likeDist2USSRV.o a - ussrvModel.o a - likelihoodComputation2USSRV.o a - fromCountTableComponentToDistance2USSRV.o a - normalDist.o a - tamura92.o a - bestTamura92param.o a - phylipSequentialFormat.o a - simulateCodonsJumps.o a - simulateJumpsAbstract.o a - ssrvDistanceSeqs2Tree.o a - multipleStochasticProcess.o a - distributionPlusInvariant.o a - extremeValDistribution.o a - gammaDistributionFixedCategories.o a - generalGammaDistributionPlusInvariant.o a - gammaDistributionPlusInvariant.o a - distributionPlusCategory.o a - simulateJumps.o a - computeJumps.o a - seqeuncesFilter.o a - optGammaMixtureLS.o a - mixtureDistribution.o a - suffStatGammaMixture.o a - GamMixtureOptimizer.o a - optGammaMixtureEM.o a - gainLossAlphabet.o a - wYangModel.o a - codonUtils.o a - likelihoodComputation2Codon.o a - likeDist2Codon.o a - unObservableData.o a - likelihoodComputationGL.o a - threeStateModel.o a - threeStateAlphabet.o a - oneTwoMoreModel.o a - betaDistributionFixedCategories.o a - betaDistributionFixedCategoriesWithOmegaUniform.o a - bblEM2codon.o a - bestAlphaAndK.o a - fromCountTableComponentToDistance2Codon.o a - gtrModel.o a - bestGtrModelParams.o a - simulateRateShiftJumps.o a - integerAlphabet.o ranlib libEvolTree.a make[3]: Leaving directory '/<>/libs/phylogeny' make[2]: Leaving directory '/<>/libs' cd programs;make all make[2]: Entering directory '/<>/programs' cd fastml && make all make[3]: Entering directory '/<>/programs/fastml' making depend aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o fastml.o fastml.cpp In file included from bbAlg.h:8, from fastml.cpp:254: bbReport.h: In constructor 'BandBReportAllPos::BandBReportAllPos(const string&, int)': bbReport.h:14:16: warning: 'BandBReportAllPos::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbReport.h:13:12: warning: 'const int BandBReportAllPos::_minNumOfNodesToVisit' [-Wreorder] const int _minNumOfNodesToVisit; ^~~~~~~~~~~~~~~~~~~~~ bbReport.h:10:11: warning: when initialized here [-Wreorder] explicit BandBReportAllPos(const string& reportFileName, int minNumOfNodesToVisit) ^~~~~~~~~~~~~~~~~ In file included from mainbb.h:4, from fastml.cpp:1: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbAlg.o bbAlg.cpp In file included from bbAlg.h:8, from bbAlg.cpp:1: bbReport.h: In constructor 'BandBReportAllPos::BandBReportAllPos(const string&, int)': bbReport.h:14:16: warning: 'BandBReportAllPos::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbReport.h:13:12: warning: 'const int BandBReportAllPos::_minNumOfNodesToVisit' [-Wreorder] const int _minNumOfNodesToVisit; ^~~~~~~~~~~~~~~~~~~~~ bbReport.h:10:11: warning: when initialized here [-Wreorder] explicit BandBReportAllPos(const string& reportFileName, int minNumOfNodesToVisit) ^~~~~~~~~~~~~~~~~ In file included from bbAlg.cpp:1: bbAlg.h: In constructor 'bbAlg::bbAlg(const tree&, std::vector&, const sequenceContainer&, bbAlg::boundMethod, const string&, double, const distribution*)': bbAlg.h:61:16: warning: 'bbAlg::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbAlg.h:60:20: warning: 'BandBReportAllPos bbAlg::BandBReportAllPos1' [-Wreorder] BandBReportAllPos BandBReportAllPos1; // report for all positions. ^~~~~~~~~~~~~~~~~~ bbAlg.cpp:7:1: warning: when initialized here [-Wreorder] bbAlg::bbAlg(const tree& et, ^~~~~ In file included from bbAlg.cpp:1: bbAlg.h:60:20: warning: 'bbAlg::BandBReportAllPos1' will be initialized after [-Wreorder] BandBReportAllPos BandBReportAllPos1; // report for all positions. ^~~~~~~~~~~~~~~~~~ bbAlg.h:29:14: warning: 'const tree& bbAlg::_et' [-Wreorder] const tree& _et; ^~~ bbAlg.cpp:7:1: warning: when initialized here [-Wreorder] bbAlg::bbAlg(const tree& et, ^~~~~ In file included from bbNodeOrderAlg.h:5, from bbAlg.h:5, from bbAlg.cpp:1: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbComputeDownAlg.o bbComputeDownAlg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbComputeUpAlg.o bbComputeUpAlg.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbEvaluateSpecificAV.o bbEvaluateSpecificAV.cpp In file included from bbEvaluateSpecificAV.cpp:1: bbEvaluateSpecificAV.h: In constructor 'bbEvaluateSpecificAV::bbEvaluateSpecificAV(const tree&, const stochasticProcess&, const sequenceContainer&, const computePijGam&)': bbEvaluateSpecificAV.h:34:27: warning: 'bbEvaluateSpecificAV::_sc' will be initialized after [-Wreorder] const sequenceContainer& _sc; ^~~ bbEvaluateSpecificAV.h:31:23: warning: 'const computePijGam& bbEvaluateSpecificAV::_bbcpij' [-Wreorder] const computePijGam& _bbcpij; ^~~~~~~ bbEvaluateSpecificAV.cpp:3:1: warning: when initialized here [-Wreorder] bbEvaluateSpecificAV::bbEvaluateSpecificAV(const tree& et, ^~~~~~~~~~~~~~~~~~~~ bbEvaluateSpecificAV.cpp: In member function 'double bbEvaluateSpecificAV::recursiveEvaluateSpecificAv(int, tree::nodeP, int)': bbEvaluateSpecificAV.cpp:65:12: warning: unused variable 'rate' [-Wunused-variable] MDOUBLE rate = _sp.rates(categor); // the r. ^~~~ In file included from bbEvaluateSpecificAV.h:4, from bbEvaluateSpecificAV.cpp:1: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbfindBestAVDynProg.o bbfindBestAVDynProg.cpp In file included from bbfindBestAVDynProg.h:5, from bbfindBestAVDynProg.cpp:1: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbNodeOrderAlg.o bbNodeOrderAlg.cpp In file included from bbNodeOrderAlg.cpp:1: bbNodeOrderAlg.h: In constructor 'bbNodeOrderAlg::bbNodeOrderAlg(const tree&, const stochasticProcess&, const sequenceContainer&, const computePijGam&, double)': bbNodeOrderAlg.h:33:27: warning: 'bbNodeOrderAlg::_sc' will be initialized after [-Wreorder] const sequenceContainer& _sc; ^~~ bbNodeOrderAlg.h:32:23: warning: 'const computePijGam& bbNodeOrderAlg::_cpij' [-Wreorder] const computePijGam& _cpij; ^~~~~ bbNodeOrderAlg.cpp:8:1: warning: when initialized here [-Wreorder] bbNodeOrderAlg::bbNodeOrderAlg(const tree& et, ^~~~~~~~~~~~~~ In file included from bbNodeOrderAlg.h:5, from bbNodeOrderAlg.cpp:1: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bb_options.o bb_options.cpp In file included from bb_options.cpp:2: bb_options.h: In constructor 'bb_options::bb_options(int&, char**)': bb_options.h:49:9: warning: 'bb_options::reportFile' will be initialized after [-Wreorder] string reportFile; ^~~~~~~~~~ bb_options.h:44:9: warning: 'std::__cxx11::string bb_options::outFile_seq_joint' [-Wreorder] string outFile_seq_joint; ^~~~~~~~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:45:9: warning: 'bb_options::outFile_seq_marginal' will be initialized after [-Wreorder] string outFile_seq_marginal; ^~~~~~~~~~~~~~~~~~~~ bb_options.h:42:9: warning: 'std::__cxx11::string bb_options::outFile_prob_joint' [-Wreorder] string outFile_prob_joint; ^~~~~~~~~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:43:9: warning: 'bb_options::outFile_prob_marginal' will be initialized after [-Wreorder] string outFile_prob_marginal; ^~~~~~~~~~~~~~~~~~~~~ bb_options.h:24:9: warning: 'std::__cxx11::string bb_options::seqfile' [-Wreorder] string seqfile; ^~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:30:21: warning: 'bb_options::distributionName' will be initialized after [-Wreorder] distributionsNames distributionName; ^~~~~~~~~~~~~~~~ bb_options.h:26:16: warning: 'bb_options::SeqFileFormat bb_options::seqOutputFormat' [-Wreorder] SeqFileFormat seqOutputFormat; ^~~~~~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:41:9: warning: 'bb_options::outTreeFileAncestor' will be initialized after [-Wreorder] string outTreeFileAncestor; ^~~~~~~~~~~~~~~~~~~ bb_options.h:32:15: warning: 'bb_options::boundMethods bb_options::boundMethod' [-Wreorder] boundMethods boundMethod; ^~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:47:10: warning: 'bb_options::gammaPar' will be initialized after [-Wreorder] MDOUBLE gammaPar; ^~~~~~~~ bb_options.h:28:7: warning: 'bool bb_options::userProvideAlpha' [-Wreorder] bool userProvideAlpha; ^~~~~~~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:48:6: warning: 'bb_options::gammaCategies' will be initialized after [-Wreorder] int gammaCategies; ^~~~~~~~~~~~~ bb_options.h:36:19: warning: 'bb_options::modelNameOptions bb_options::modelName' [-Wreorder] modelNameOptions modelName; ^~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h:39:7: warning: 'bb_options::useChebyshev' will be initialized after [-Wreorder] bool useChebyshev; ^~~~~~~~~~~~ bb_options.h:27:9: warning: 'std::__cxx11::string bb_options::treeOutFile' [-Wreorder] string treeOutFile; ^~~~~~~~~~~ bb_options.cpp:6:1: warning: when initialized here [-Wreorder] bb_options::bb_options(int& argc, char *argv[]): ^~~~~~~~~~ In file included from bb_options.cpp:2: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o bbReport.o bbReport.cpp In file included from bbReport.cpp:1: bbReport.h: In constructor 'BandBReportAllPos::BandBReportAllPos(const string&, int)': bbReport.h:14:16: warning: 'BandBReportAllPos::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbReport.h:13:12: warning: 'const int BandBReportAllPos::_minNumOfNodesToVisit' [-Wreorder] const int _minNumOfNodesToVisit; ^~~~~~~~~~~~~~~~~~~~~ bbReport.h:10:11: warning: when initialized here [-Wreorder] explicit BandBReportAllPos(const string& reportFileName, int minNumOfNodesToVisit) ^~~~~~~~~~~~~~~~~ bbReport.h: In constructor 'BandBReport::BandBReport(const string&, int, int)': bbReport.h:53:16: warning: 'BandBReport::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbReport.h:51:12: warning: 'const int BandBReport::_position' [-Wreorder] const int _position; ^~~~~~~~~ bbReport.cpp:10:1: warning: when initialized here [-Wreorder] BandBReport::BandBReport( const string& reportFileName, const int position, const int alphabetSize ) : ^~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o computeMarginalReconstruction.o computeMarginalReconstruction.cpp computeMarginalReconstruction.cpp: In member function 'void computeMarginalReconstruction::compute(const distribution*)': computeMarginalReconstruction.cpp:67:11: warning: unused variable 'likelihoodOfPos' [-Wunused-variable] MDOUBLE likelihoodOfPos = 0; ^~~~~~~~~~~~~~~ computeMarginalReconstruction.cpp:45:10: warning: unused variable 'totalLikelihoodOfReconstruction' [-Wunused-variable] MDOUBLE totalLikelihoodOfReconstruction = 0; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o jointNoGamma.o jointNoGamma.cpp jointNoGamma.cpp: In member function 'void jointNoGamma::compute()': jointNoGamma.cpp:23:10: warning: unused variable 'totalLikelihoodOfReconstruction' [-Wunused-variable] MDOUBLE totalLikelihoodOfReconstruction = 0; ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ jointNoGamma.cpp: In member function 'std::vector jointNoGamma::computeJointAncestralFromSSC(int, const suffStatGlobalHomPos&, const suffStatGlobalHomPosJointNoGamma&, doubleRep&)': jointNoGamma.cpp:108:12: warning: unused variable 'maxL' [-Wunused-variable] MDOUBLE maxL = VERYSMALL; ^~~~ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o mainbb.o mainbb.cpp In file included from bbAlg.h:8, from mainbb.cpp:5: bbReport.h: In constructor 'BandBReportAllPos::BandBReportAllPos(const string&, int)': bbReport.h:14:16: warning: 'BandBReportAllPos::_reportFileName' will be initialized after [-Wreorder] const string& _reportFileName; ^~~~~~~~~~~~~~~ bbReport.h:13:12: warning: 'const int BandBReportAllPos::_minNumOfNodesToVisit' [-Wreorder] const int _minNumOfNodesToVisit; ^~~~~~~~~~~~~~~~~~~~~ bbReport.h:10:11: warning: when initialized here [-Wreorder] explicit BandBReportAllPos(const string& reportFileName, int minNumOfNodesToVisit) ^~~~~~~~~~~~~~~~~ In file included from mainbb.cpp:31: ../../libs/phylogeny/bestGtrModelParams.h: In constructor 'C_evalGTRParamProportional::C_evalGTRParamProportional(GTRParam, const tree&, const sequenceContainer&, stochasticProcess&, const gammaDistribution*, const Vdouble*)': ../../libs/phylogeny/bestGtrModelParams.h:175:21: warning: 'C_evalGTRParamProportional::_sp' will be initialized after [-Wreorder] stochasticProcess& _sp; ^~~ ../../libs/phylogeny/bestGtrModelParams.h:173:27: warning: 'const gammaDistribution* C_evalGTRParamProportional::_pProportionDist' [-Wreorder] const gammaDistribution* _pProportionDist; ^~~~~~~~~~~~~~~~ ../../libs/phylogeny/bestGtrModelParams.h:162:3: warning: when initialized here [-Wreorder] C_evalGTRParamProportional( const GTRParam param, ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from mainbb.h:4, from mainbb.cpp:1: bb_options.h: At global scope: bb_options.h:62:21: warning: 'const string usege_splash_screen()' defined but not used [-Wunused-function] static const string usege_splash_screen() { ^~~~~~~~~~~~~~~~~~~ mainbb.cpp: In member function 'void mainbb::findAncestralSequencesGammaJoint()': mainbb.cpp:428:101: warning: 'bm' may be used uninitialized in this function [-Wmaybe-uninitialized] bbAlg bbAlg1(_et,_spVec,_sc,bm,_options->reportFile,_options->computeAgainExactTreshold,_forceDistr); ^ aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o sequenceDataDiff.o sequenceDataDiff.cpp aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -Wall -Wno-sign-compare -I. -I../../libs/phylogeny -DLOG -c -o suffStatComponentJointNoGamma.o suffStatComponentJointNoGamma.cpp ar rv libfastml.a fastml.o bbAlg.o bbComputeDownAlg.o bbComputeUpAlg.o bbEvaluateSpecificAV.o bbfindBestAVDynProg.o bbNodeOrderAlg.o bb_options.o bbReport.o computeMarginalReconstruction.o jointNoGamma.o mainbb.o sequenceDataDiff.o suffStatComponentJointNoGamma.o ar: creating libfastml.a a - fastml.o a - bbAlg.o a - bbComputeDownAlg.o a - bbComputeUpAlg.o a - bbEvaluateSpecificAV.o a - bbfindBestAVDynProg.o a - bbNodeOrderAlg.o a - bb_options.o a - bbReport.o a - computeMarginalReconstruction.o a - jointNoGamma.o a - mainbb.o a - sequenceDataDiff.o a - suffStatComponentJointNoGamma.o ranlib libfastml.a aarch64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -L../../libs/phylogeny fastml.o libfastml.a ../../libs/phylogeny/libEvolTree.a -o fastml /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': ./programs/fastml/fastml.cpp:343: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/istream:608: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:516: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:627: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:632: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:680: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/istream:608: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:516: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:627: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:632: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:680: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:728: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:567: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:567: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o:/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: more undefined references to `std::basic_ios >::clear(std::_Ios_Iostate)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': ./programs/fastml/fastml.cpp:344: undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/fastml.cpp:348: undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': ./programs/fastml/fastml.cpp:343: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': ./programs/fastml/fastml.cpp:354: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': ./programs/fastml/fastml.cpp:357: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `FindDifferencesBetween2SequenceContainerFiles()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o: in function `main': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: fastml.o:(.data.rel.local.DW.ref.__gxx_personality_v0[DW.ref.__gxx_personality_v0]+0x0): undefined reference to `__gxx_personality_v0' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': ./programs/fastml/mainbb.cpp:87: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::~mainbb()': ./programs/fastml/mainbb.cpp:88: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBranchLengthsAndAlpha()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:728: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printOutputTree()': ./programs/fastml/mainbb.cpp:368: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::fillOptionsParameters(int, char**)': ./programs/fastml/mainbb.cpp:383: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:383: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printSearchParameters()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printBBProjectInfo()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&) [clone .constprop.291]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&) [clone .constprop.291]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&) [clone .constprop.291]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::replaceSequences(sequenceContainer&, sequenceContainer&) [clone .constprop.291]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::printAncestralSequencesGammaJoint()': ./programs/fastml/mainbb.cpp:72: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingTreeNJ_fromDistances(std::vector >, std::allocator > > > const&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingTreeNJ_fromDistances(std::vector >, std::allocator > > > const&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingTreeNJ_fromDistances(std::vector >, std::allocator > > > const&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingTreeNJ_fromDistances(std::vector >, std::allocator > > > const&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingTreeNJ_fromDistances(std::vector >, std::allocator > > > const&, std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingNJtreeNjMLdis()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingEvolTreeTopology()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': ./programs/fastml/mainbb.cpp:478: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': ./programs/fastml/mainbb.cpp:444: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesHomJoint()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/istream:608: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:516: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:627: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:632: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:680: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:567: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': ./programs/fastml/mainbb.cpp:556: undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::computeFreq(codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/istream:607: undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/istream:608: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:516: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:627: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:632: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:567: undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': ./programs/fastml/mainbb.cpp:389: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': ./programs/fastml/mainbb.cpp:387: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:388: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:388: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': ./programs/fastml/mainbb.cpp:392: undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingSequenceData()': /usr/aarch64-linux-gnu/include/c++/8/fstream:514: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:257: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:291: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:293: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:273: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:275: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:332: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:333: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/../../libs/phylogeny/gammaDistribution.h:23: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:352: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:353: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:255: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:282: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:286: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:327: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:328: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:318: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:322: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:336: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:337: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:340: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:341: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:344: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:344: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:309: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:311: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:264: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:268: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:300: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:304: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:302: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:320: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:284: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:277: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:313: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):./programs/fastml/mainbb.cpp:295: more undefined references to `operator new(unsigned long)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:318: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:320: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:277: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:352: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:353: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingStochasticProcess()': ./programs/fastml/mainbb.cpp:336: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:340: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:332: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/mainbb.cpp:257: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/mainbb.cpp:538: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/../../libs/phylogeny/wYangModel.h:15: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/../../libs/phylogeny/codon.h:55: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/../../libs/phylogeny/codon.h:55: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/mainbb.cpp:538: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': ./programs/fastml/../../libs/phylogeny/wYangModel.h:15: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::createStochasticProcessVec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBLAndModelParam()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBLAndModelParam()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBLAndModelParam()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBLAndModelParam()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::getStartingBLAndModelParam()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::findAncestralSequencesGammaJoint()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/mainbb.cpp:383: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': ./programs/fastml/mainbb.cpp:383: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `mainbb::mainbb(int, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `jcDistance::~jcDistance()': ./programs/fastml/../../libs/phylogeny/jcDistance.h:17: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `tree::~tree()': ./programs/fastml/../../libs/phylogeny/tree.h:102: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `aaJC::clone() const': ./programs/fastml/../../libs/phylogeny/aaJC.h:21: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `jcDistance::clone() const': ./programs/fastml/../../libs/phylogeny/jcDistance.h:21: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `nucJC::clone() const': ./programs/fastml/../../libs/phylogeny/nucJC.h:21: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `nucJC::~nucJC()': ./programs/fastml/../../libs/phylogeny/nucJC.h:17: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `aaJC::~aaJC()': ./programs/fastml/../../libs/phylogeny/aaJC.h:18: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `nucJC::d2Pij_dt2(int, int, double) const': ./programs/fastml/../../libs/phylogeny/nucJC.h:37: undefined reference to `exp' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/nucJC.h:37: undefined reference to `exp' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `nucJC::dPij_dt(int, int, double) const': ./programs/fastml/../../libs/phylogeny/nucJC.h:31: undefined reference to `exp' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/nucJC.h:31: undefined reference to `exp' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `nucJC::Pij_t(int, int, double) const': ./programs/fastml/../../libs/phylogeny/nucJC.h:26: undefined reference to `exp' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):./programs/fastml/../../libs/phylogeny/nucJC.h:26: more undefined references to `exp' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `trivialAccelerator::clone() const': ./programs/fastml/../../libs/phylogeny/trivialAccelerator.h:18: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/trivialAccelerator.h:18: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `trivialAccelerator::~trivialAccelerator()': ./programs/fastml/../../libs/phylogeny/trivialAccelerator.h:19: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `gammaDistribution::~gammaDistribution()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `gammaDistribution::~gammaDistribution()': ./programs/fastml/../../libs/phylogeny/gammaDistribution.h:23: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `jcDistance::giveDistance(sequence const&, sequence const&, std::vector > const*, double*) const': ./programs/fastml/../../libs/phylogeny/jcDistance.h:38: undefined reference to `__dynamic_cast' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/jcDistance.h:40: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/jcDistance.h:41: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/jcDistance.h:81: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/jcDistance.h:41: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/../../libs/phylogeny/jcDistance.h:40: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHomSpec::~computePijHomSpec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHom::~computePijHom()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijGam::~computePijGam()': ./programs/fastml/../../libs/phylogeny/computePijComponent.h:43: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHom::~computePijHom()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHom::~computePijHom()': ./programs/fastml/../../libs/phylogeny/computePijComponent.h:31: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHomSpec::~computePijHomSpec()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `computePijHomSpec::~computePijHomSpec()': ./programs/fastml/../../libs/phylogeny/computePijComponent.h:15: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `gammaDistribution::~gammaDistribution()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `jointNoGamma::~jointNoGamma()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >, std::allocator > > >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1405: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1408: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1405: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1405: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1408: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1405: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_erase(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, int>, std::_Select1st, std::allocator > const, int> >, std::less, std::allocator > >, std::allocator, std::allocator > const, int> > >::_M_erase(std::_Rb_tree_node, std::allocator > const, int> >*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `codon::~codon()': ./programs/fastml/../../libs/phylogeny/codon.h:55: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': ./programs/fastml/../../libs/phylogeny/codon.h:55: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': ./programs/fastml/../../libs/phylogeny/codon.h:55: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `wYangModel::~wYangModel()': ./programs/fastml/../../libs/phylogeny/wYangModel.h:19: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, stochasticProcess const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:615: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:621: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:615: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `q2pt::~q2pt()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `q2pt::~q2pt()': ./programs/fastml/../../libs/phylogeny/fromQtoPt.h:15: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI8alphabet[_ZTI8alphabet]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI16replacementModel[_ZTI16replacementModel]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI14pijAccelerator[_ZTI14pijAccelerator]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI4tree[_ZTI4tree]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI6mainbb[_ZTI6mainbb]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI4aaJC[_ZTI4aaJC]+0x0): undefined reference to `vtable for __cxxabiv1::__si_class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI17computePijHomSpec[_ZTI17computePijHomSpec]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI13computePijHom[_ZTI13computePijHom]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI13computePijGam[_ZTI13computePijGam]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI14distanceMethod[_ZTI14distanceMethod]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI10jcDistance[_ZTI10jcDistance]+0x0): undefined reference to `vtable for __cxxabiv1::__si_class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI5nucJC[_ZTI5nucJC]+0x0): undefined reference to `vtable for __cxxabiv1::__si_class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(mainbb.o):(.data.rel.ro._ZTI18trivialAccelerator[_ZTI18trivialAccelerator]+0x0): undefined reference to `vtable for __cxxabiv1::__si_class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': ./programs/fastml/sequenceDataDiff.cpp:40: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::printDiff(std::ostream&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1222: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1453: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1453: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: more undefined references to `std::__throw_logic_error(char const*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `sequenceDataDiff::computeDifferences()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unitDiff const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unitDiff const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unitDiff const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unitDiff const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unitDiff const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(sequenceDataDiff.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::~bbAlg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::~bbAlg()': ./programs/fastml/bbAlg.cpp:185: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:55: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:56: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:57: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:63: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:64: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:69: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/bbAlg.cpp:52: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::decideIfHaveToGoDown(int, double&, double&) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::decideIfHaveToGoDown(int, double&, double&) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::decideIfHaveToGoDown(int, double&, double&) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::decideIfHaveToGoDown(int, double&, double&) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructPositions(int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructPositions(int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructPositions(int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructPositions(int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructPositions(int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': ./programs/fastml/bbAlg.cpp:34: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:36: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': ./programs/fastml/bbAlg.cpp:38: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': ./programs/fastml/bbAlg.cpp:38: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:34: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbAlg(tree const&, std::vector >&, sequenceContainer const&, bbAlg::boundMethod, std::__cxx11::basic_string, std::allocator > const&, double, distribution const*)': ./programs/fastml/bbAlg.cpp:36: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::fromAncestralSequenceToSeqData()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:85: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:86: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:86: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:91: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:102: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/istream:94: undefined reference to `VTT for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/istream:94: undefined reference to `VTT for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/istream:95: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:85: undefined reference to `VTT for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:85: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/istream:850: undefined reference to `VTT for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:966: undefined reference to `vtable for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:966: undefined reference to `vtable for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:966: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:968: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:1076: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:1081: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbReport.h:17: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbReport.h:18: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:1131: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:1015: undefined reference to `vtable for std::basic_fstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:94: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:94: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:94: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:97: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:97: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bbAlg.cpp:97: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbReport.h:16: undefined reference to `std::basic_fstream >::~basic_fstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:966: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `bbAlg::bbReconstructAllPositions(sequenceContainer&)': ./programs/fastml/bbAlg.cpp:85: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1366: more undefined references to `std::__cxx11::basic_string, std::allocator >::_M_assign(std::__cxx11::basic_string, std::allocator > const&)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:213: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:216: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:213: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:216: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:213: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:552: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:562: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:552: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:213: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, sequence const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:552: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:552: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:615: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:621: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:615: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, double const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbAlg.o):(.data.rel.ro._ZTI5bbAlg[_ZTI5bbAlg]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': ./programs/fastml/bbEvaluateSpecificAV.cpp:17: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': ./programs/fastml/bbEvaluateSpecificAV.cpp:17: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::~bbEvaluateSpecificAV()': ./programs/fastml/bbEvaluateSpecificAV.cpp:18: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': ./programs/fastml/bbEvaluateSpecificAV.cpp:7: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': ./programs/fastml/bbEvaluateSpecificAV.cpp:7: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `bbEvaluateSpecificAV::bbEvaluateSpecificAV(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >, std::allocator > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >, std::allocator > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `void std::vector >::emplace_back(int&&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbEvaluateSpecificAV.o):(.data.rel.ro._ZTI20bbEvaluateSpecificAV[_ZTI20bbEvaluateSpecificAV]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': ./programs/fastml/bbfindBestAVDynProg.cpp:21: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': ./programs/fastml/bbfindBestAVDynProg.cpp:21: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::~bbfindBestAVDynProg()': ./programs/fastml/bbfindBestAVDynProg.cpp:22: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': ./programs/fastml/bbfindBestAVDynProg.cpp:10: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': ./programs/fastml/bbfindBestAVDynProg.cpp:10: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `bbfindBestAVDynProg::bbfindBestAVDynProg(tree const*, stochasticProcess const*, sequenceContainer const&, computePijGam const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbfindBestAVDynProg.o):(.data.rel.ro._ZTI19bbfindBestAVDynProg[_ZTI19bbfindBestAVDynProg]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::~bbNodeOrderAlg()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::~bbNodeOrderAlg()': ./programs/fastml/bbNodeOrderAlg.cpp:20: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::putBack(tree::TreeNode*&, double const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::bbNodeOrderAlg(tree const&, stochasticProcess const&, sequenceContainer const&, computePijGam const&, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::getNextNodeAndCharOrder(tree::TreeNode*&, std::vector >&, std::vector >&, int, bool, double&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `bbNodeOrderAlg::findBestOrderInNode(tree::TreeNode*, int) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `void std::vector, std::allocator > >::_M_realloc_insert const&>(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, std::pair const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `void std::vector, std::allocator > >::_M_realloc_insert const&>(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, std::pair const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbNodeOrderAlg.o):(.data.rel.ro._ZTI14bbNodeOrderAlg[_ZTI14bbNodeOrderAlg]+0x0): undefined reference to `vtable for __cxxabiv1::__class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `usage()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1268: more undefined references to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `usage()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:312: more undefined references to `std::__throw_length_error(char const*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `usage()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': ./programs/fastml/bb_options.cpp:30: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/bb_options.cpp:30: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:728: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: more undefined references to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:559: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ostream:559: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': ./programs/fastml/bb_options.cpp:30: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::bb_options(int&, char**)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::modelNameStr[abi:cxx11]() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: more undefined references to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::modelNameStr[abi:cxx11]() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::modelNameStr[abi:cxx11]() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::modelNameStr[abi:cxx11]() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1439: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `bb_options::modelNameStr[abi:cxx11]() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bb_options.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:728: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': ./programs/fastml/bbReport.cpp:48: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o):/usr/aarch64-linux-gnu/include/c++/8/ostream:561: more undefined references to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': ./programs/fastml/bbReport.cpp:43: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/fstream:727: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::makeReport() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `BandBReport::report(std::__cxx11::basic_string, std::allocator >, int, int, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `std::vector >, std::allocator > > >::~vector()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbReport.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__ops::_Val_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__ops::_Val_less_iter) [clone .constprop.302]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__insertion_sort<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__ops::_Iter_less_iter) [clone .constprop.301]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__adjust_heap<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, std::pair, std::allocator > >, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, long, std::pair, std::allocator > >, __gnu_cxx::__ops::_Iter_less_iter) [clone .constprop.295]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__introsort_loop<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.253]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6288: undefined reference to `std::__cxx11::basic_string, std::allocator >::swap(std::__cxx11::basic_string, std::allocator >&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6288: undefined reference to `std::__cxx11::basic_string, std::allocator >::swap(std::__cxx11::basic_string, std::allocator >&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6288: undefined reference to `std::__cxx11::basic_string, std::allocator >::swap(std::__cxx11::basic_string, std::allocator >&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__introsort_loop<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.253]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__introsort_loop<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.253]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6288: undefined reference to `std::__cxx11::basic_string, std::allocator >::swap(std::__cxx11::basic_string, std::allocator >&)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::__introsort_loop<__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, __gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, long, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.253]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillMarginalReconstructionSpecificNode(tree::TreeNode*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillMarginalReconstructionSpecificNode(tree::TreeNode*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillMarginalReconstructionSpecificNode(tree::TreeNode*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillResultProb(suffStatGlobalGamPos const&, stochasticProcess const&, tree const&, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': ./programs/fastml/computeMarginalReconstruction.cpp:168: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNodePos(std::ostream&, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/computeMarginalReconstruction.cpp:138: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:93: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/computeMarginalReconstruction.cpp:156: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/computeMarginalReconstruction.cpp:158: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/computeMarginalReconstruction.cpp:124: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::outputTheMarginalProbForEachCharForEachNode(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::computeMarginalReconstruction(tree const&, std::vector >&, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::fillMarginalReconstruction()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': ./programs/fastml/computeMarginalReconstruction.cpp:55: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/computeMarginalReconstruction.cpp:55: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/computeMarginalReconstruction.cpp:55: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `computeMarginalReconstruction::compute(distribution const*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, double const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned long, double const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int&&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `void std::vector, std::allocator > >, std::allocator, std::allocator > > > >::_M_realloc_insert, std::allocator > > >(__gnu_cxx::__normal_iterator, std::allocator > >*, std::vector, std::allocator > >, std::allocator, std::allocator > > > > >, std::pair, std::allocator > >&&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(computeMarginalReconstruction.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:462: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:385: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:742: undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:853: undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:858: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:132: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:133: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:134: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:140: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:141: undefined reference to `log' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:146: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:906: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:793: undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/fstream:247: undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/streambuf:205: undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:158: undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/fstream:740: undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:282: undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::outputTheJointProbAtEachSite(std::__cxx11::basic_string, std::allocator > const&)': ./programs/fastml/jointNoGamma.cpp:129: undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::computeJointAncestralFromSSC(int, suffStatGlobalHomPos const&, suffStatGlobalHomPosJointNoGamma const&, double&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fillComputeUp(int, suffStatGlobalHomPos&, suffStatGlobalHomPosJointNoGamma&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fillComputeUp(int, suffStatGlobalHomPos&, suffStatGlobalHomPosJointNoGamma&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fillComputeUp(int, suffStatGlobalHomPos&, suffStatGlobalHomPosJointNoGamma&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fillComputeUp(int, suffStatGlobalHomPos&, suffStatGlobalHomPosJointNoGamma&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fillComputeUp(int, suffStatGlobalHomPos&, suffStatGlobalHomPosJointNoGamma&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::jointNoGamma(tree const&, stochasticProcess const&, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fromJointReconstructionToSequenceContainer(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fromJointReconstructionToSequenceContainer(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fromJointReconstructionToSequenceContainer(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::fromJointReconstructionToSequenceContainer(std::vector, std::allocator >, std::allocator, std::allocator > > > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': ./programs/fastml/jointNoGamma.cpp:26: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/jointNoGamma.cpp:26: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./programs/fastml/jointNoGamma.cpp:26: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1222: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `jointNoGamma::compute()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `std::vector >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(jointNoGamma.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeDownAlg.o): in function `BBfillComputeDown(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, suffStatGlobalHomPos const&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeDownAlg.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `BBfillComputeUp(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `BBfillComputeUp(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `BBfillComputeUp(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `BBfillComputeUp(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `BBfillComputeUp(tree const&, sequenceContainer const&, int, computePijHom const&, suffStatGlobalHomPos&, std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: libfastml.a(bbComputeUpAlg.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::relations(int, int) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::relations(int, int) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromInt[abi:cxx11](int) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1281: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromInt[abi:cxx11](int) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromInt[abi:cxx11](int) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1353: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const [clone .constprop.143]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const [clone .constprop.143]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const [clone .constprop.143]': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1353: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(char) const [clone .constprop.143]': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromString(std::__cxx11::basic_string, std::allocator > const&) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(std::__cxx11::basic_string, std::allocator > const&, int) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(std::__cxx11::basic_string, std::allocator > const&, int) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(std::__cxx11::basic_string, std::allocator > const&, int) const': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1353: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::fromChar(std::__cxx11::basic_string, std::allocator > const&, int) const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:1281: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_replace_aux(unsigned long, unsigned long, unsigned long, char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:295: undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': ./libs/phylogeny/amino.cpp:148: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/amino.cpp:148: undefined reference to `std::cout' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/amino.cpp:148: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': ./libs/phylogeny/amino.cpp:148: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `aminoUtility::codonOf(int, codon&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': ./libs/phylogeny/amino.h:26: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': ./libs/phylogeny/amino.h:26: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::clone() const': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::~amino()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::~amino()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `amino::~amino()': ./libs/phylogeny/amino.h:25: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::vector >, std::allocator > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::vector >, std::allocator > > >::_M_default_append(unsigned long)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_vector.h:1643: undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:641: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:645: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:641: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >* std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_M_copy, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node>(std::_Rb_tree_node, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > const*, std::_Rb_tree_node_base*, std::_Rb_tree, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::_Select1st, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::_Alloc_node&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:645: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:641: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:1855: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:1858: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:641: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_tree.h:1855: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(amino.o):(.data.rel.ro._ZTI5amino[_ZTI5amino]+0x0): undefined reference to `vtable for __cxxabiv1::__si_class_type_info' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:56: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:79: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBBL::bestAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:272: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:295: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestBetaAndBBL::bestBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:384: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:408: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/bestAlpha.cpp:428: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphaAndBetaAndBBL::bestAlphaAndBetaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, double, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/bestAlpha.cpp:238: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/bestAlpha.cpp:238: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/bestAlpha.cpp:238: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bestAlphasAndBBLProportional::bestAlphasAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `gammaDistribution::setBeta(double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `gammaDistribution::setBeta(double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `bblEM::~bblEM()': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `std::vector >::operator=(std::vector > const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalGlobalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalBeta, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: more undefined references to `std::__throw_bad_alloc()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:212: undefined reference to `std::__throw_logic_error(char const*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:102: undefined reference to `std::__throw_bad_alloc()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:465: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:89: undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/stl_uninitialized.h:86: undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, sequenceContainer const&)': /usr/aarch64-linux-gnu/include/c++/8/bits/vector.tcc:457: undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `__static_initialization_and_destruction_0': /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/iostream:74: undefined reference to `std::ios_base::Init::~Init()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': ./libs/phylogeny/bestAlpha.h:180: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': ./libs/phylogeny/bestAlpha.h:180: undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `C_evalLocalAlpha::operator()(double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.tcc:219: undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestAlpha.o): in function `double brent(double, double, double, C_evalLocalAlpha, double, double*)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamFixedTree::bestHkyParamFixedTree(tree const&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamFixedTree::bestHkyParamFixedTree(tree const&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamFixedTree::bestHkyParamFixedTree(tree const&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamFixedTree::bestHkyParamFixedTree(tree const&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAndBBL::bestHkyParamAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, double, double, double, int, int)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/bestHKYparam.cpp:124: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/bestHKYparam.cpp:134: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/bits/locale_facets.h:876: more undefined references to `std::ctype::_M_widen_init() const' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: more undefined references to `operator delete(void*)' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBL::bestHkyParamAlphaAndBBL(tree&, sequenceContainer const&, stochasticProcess&, std::vector > const*, int, double, double, double, double, double, int, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o):/usr/aarch64-linux-gnu/include/c++/8/bits/basic_ios.h:50: more undefined references to `std::__throw_bad_cast()' follow /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6084: undefined reference to `std::__cxx11::basic_string, std::allocator >::compare(char const*) const' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:111: undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/bits/basic_string.h:6328: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/bestHKYparam.cpp:321: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/bestHKYparam.cpp:321: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/bestHKYparam.cpp:321: undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ext/new_allocator.h:125: undefined reference to `operator delete(void*)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:221: undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:561: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ./libs/phylogeny/logFile.h:17: undefined reference to `std::cerr' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: ../../libs/phylogeny/libEvolTree.a(bestHKYparam.o): in function `bestHkyParamAlphaAndBBLProportional::bestHkyParamAlphaAndBBLProportional(tree&, std::vector >&, multipleStochasticProcess*, gammaDistribution*, std::vector >, std::vector >, double, double, double, double, int, int, bool, bool, std::__cxx11::basic_string, std::allocator >, bool, bool, std::vector > const*, double, double, double, double, double)': /usr/aarch64-linux-gnu/include/c++/8/ostream:591: undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/include/c++/8/ostream:613: undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/aarch64-linux-gnu/8/../../../../aarch64-linux-gnu/bin/ld: /usr/aarch64-linux-gnu/incl