sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | fastqtl 2.184+dfsg-8 (armhf) Tue, 16 Nov 2021 05:18:10 +0000 | +==============================================================================+ Package: fastqtl Version: 2.184+dfsg-8 Source Version: 2.184+dfsg-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-395a4503-64e3-488d-8ff2-fbead0073add' with '<>' I: NOTICE: Log filtering will replace 'build/fastqtl-ZvpExM/resolver-HnClLz' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-11-16-0207.20-F-2021-11-15-0801.23.pdiff [53.4 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-11-16-0207.20-F-2021-11-15-0801.23.pdiff [53.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-11-16-0207.20-F-2021-11-15-0801.23.pdiff [44.2 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-11-16-0207.20-F-2021-11-15-0801.23.pdiff [44.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8539 kB] Fetched 8929 kB in 4s (2378 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 libctf0 libgmp10 libncursesw6 libtinfo6 ncurses-base ncurses-bin 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 6719 kB of archives. After this operation, 3072 B disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libncursesw6 amd64 6.3-1 [133 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libtinfo6 amd64 6.3-1 [349 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 ncurses-bin amd64 6.3-1 [439 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 ncurses-base all 6.3-1 [278 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libgmp10 amd64 2:6.2.1+dfsg-3 [560 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libctf0 amd64 2.37-9 [93.8 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libctf-nobfd0 amd64 2.37-9 [155 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.37-9 [1786 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libbinutils amd64 2.37-9 [579 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 binutils amd64 2.37-9 [62.1 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-common amd64 2.37-9 [2285 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6719 kB in 0s (102 MB/s) (Reading database ... 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Download source files with APT ------------------------------ Reading package lists... NOTICE: 'fastqtl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fastqtl.git Please use: git clone https://salsa.debian.org/med-team/fastqtl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 17.1 MB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main fastqtl 2.184+dfsg-8 (dsc) [2188 B] Get:2 http://debian.oregonstate.edu/debian unstable/main fastqtl 2.184+dfsg-8 (tar) [17.1 MB] Get:3 http://debian.oregonstate.edu/debian unstable/main fastqtl 2.184+dfsg-8 (diff) [19.8 kB] Fetched 17.1 MB in 0s (94.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/fastqtl-ZvpExM/fastqtl-2.184+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/fastqtl-ZvpExM' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 13), libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [456 B] Get:5 copy:/<>/apt_archive ./ Packages [543 B] Fetched 1956 B in 0s (77.7 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-base:armhf gcc-11-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libasan6:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libblas-dev:armhf libblas3:armhf libboost-dev:armhf libboost-iostreams-dev:armhf libboost-iostreams1.74-dev:armhf libboost-iostreams1.74.0:armhf libboost-program-options-dev:armhf libboost-program-options1.74-dev:armhf libboost-program-options1.74.0:armhf libboost-regex1.74-dev:armhf libboost-regex1.74.0:armhf libboost1.74-dev:armhf libbrotli1:armhf libbz2-1.0:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armhf libdeflate0:armhf libdpkg-perl libeigen3-dev libelf1 libffi8:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:armhf libgcc-11-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl25:armhf libgslcblas0:armhf libgssapi-krb5-2:armhf libhogweed6:armhf libhts-dev:armhf libhts3:armhf libhtscodecs2:armhf libicu-dev:armhf libicu67 libicu67:armhf libidn2-0:armhf libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libnettle8:armhf libnghttp2-14:armhf libnsl-dev libnsl-dev:armhf libnsl2:armhf libp11-kit0:armhf libperl5.32 libpipeline1 libpsl5:armhf librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libssh2-1:armhf libssl1.1:armhf libstdc++-10-dev:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:armhf linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.32 pkg-config po-debconf r-mathlib:armhf rpcsvc-proto sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff liblapack-doc:armhf libboost-doc:armhf libboost1.74-doc:armhf libboost-atomic1.74-dev:armhf libboost-chrono1.74-dev:armhf libboost-container1.74-dev:armhf libboost-context1.74-dev:armhf libboost-contract1.74-dev:armhf libboost-coroutine1.74-dev:armhf libboost-date-time1.74-dev:armhf libboost-exception1.74-dev:armhf libboost-fiber1.74-dev:armhf libboost-filesystem1.74-dev:armhf libboost-graph1.74-dev:armhf libboost-graph-parallel1.74-dev:armhf libboost-locale1.74-dev:armhf libboost-log1.74-dev:armhf libboost-math1.74-dev:armhf libboost-mpi1.74-dev:armhf libboost-mpi-python1.74-dev:armhf libboost-numpy1.74-dev:armhf libboost-python1.74-dev:armhf libboost-random1.74-dev:armhf libboost-serialization1.74-dev:armhf libboost-stacktrace1.74-dev:armhf libboost-system1.74-dev:armhf libboost-test1.74-dev:armhf libboost-thread1.74-dev:armhf libboost-timer1.74-dev:armhf libboost-type-erasure1.74-dev:armhf libboost-wave1.74-dev:armhf libboost1.74-tools-dev:armhf libmpfrc++-dev:armhf libntl-dev:armhf libboost-nowide1.74-dev:armhf glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf glibc-doc manpages-dev:armhf libcurl4-doc:armhf libgnutls28-dev:armhf libidn11-dev:armhf libkrb5-dev:armhf libldap2-dev:armhf librtmp-dev:armhf libssh2-1-dev:armhf gnupg git bzr libeigen3-doc libmpfrc++-dev gnutls-bin:armhf gsl-ref-psdoc:armhf | gsl-doc-pdf:armhf | gsl-doc-info:armhf | gsl-ref-html:armhf krb5-doc:armhf krb5-user:armhf icu-doc:armhf liblzma-doc:armhf libstdc++-10-doc:armhf libstdc++-11-doc libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:armhf libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:armhf libldap-common:armhf publicsuffix:armhf libsasl2-modules:armhf libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl r-base-core:armhf r-base-dev:armhf The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils build-essential cpp-11-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-10-base:armhf gcc-11-arm-linux-gnueabihf gcc-11-arm-linux-gnueabihf-base gcc-11-base:armhf gcc-11-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libasan6:armhf libasan6-armhf-cross libatomic1:armhf libatomic1-armhf-cross libblas-dev:armhf libblas3:armhf libboost-dev:armhf libboost-iostreams-dev:armhf libboost-iostreams1.74-dev:armhf libboost-iostreams1.74.0:armhf libboost-program-options-dev:armhf libboost-program-options1.74-dev:armhf libboost-program-options1.74.0:armhf libboost-regex1.74-dev:armhf libboost-regex1.74.0:armhf libboost1.74-dev:armhf libbrotli1:armhf libbz2-1.0:armhf libc6:armhf libc6-armhf-cross libc6-dev libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armhf libcrypt1:armhf libcurl3-gnutls:armhf libcurl4-gnutls-dev:armhf libdb5.3:armhf libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armhf libdeflate0:armhf libdpkg-perl libeigen3-dev libelf1 libffi8:armhf libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:armhf libgcc-11-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libglib2.0-0 libgmp10:armhf libgnutls30:armhf libgomp1:armhf libgomp1-armhf-cross libgsl-dev:armhf libgsl25:armhf libgslcblas0:armhf libgssapi-krb5-2:armhf libhogweed6:armhf libhts-dev:armhf libhts3:armhf libhtscodecs2:armhf libicu-dev:armhf libicu67 libicu67:armhf libidn2-0:armhf libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf libldap-2.4-2:armhf liblocale-gettext-perl liblzma-dev:armhf liblzma5:armhf libmagic-mgc libmagic1 libnettle8:armhf libnghttp2-14:armhf libnsl-dev libnsl-dev:armhf libnsl2:armhf libp11-kit0:armhf libperl5.32 libpipeline1 libpsl5:armhf librtmp1:armhf libsasl2-2:armhf libsasl2-modules-db:armhf libsigsegv2 libssh2-1:armhf libssl1.1:armhf libstdc++-10-dev:armhf libstdc++-11-dev libstdc++-11-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtasn1-6:armhf libtirpc-dev libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libunistring2:armhf libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:armhf linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db perl perl-modules-5.32 pkg-config po-debconf r-mathlib:armhf rpcsvc-proto sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 162 newly installed, 0 to remove and 0 not upgraded. Need to get 315 MB of archives. After this operation, 1222 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [972 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-4 [143 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.4-1 [36.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main armhf gcc-10-base armhf 10.3.0-12 [206 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armhf gcc-11-base armhf 11.2.0-10 [206 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1 [823 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.37-9 [2861 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.26-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-4 [2251 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-10 [1952 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-10 [49.7 MB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf-base amd64 11.2.0-9cross1 [205 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [48.3 MB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:11.2.0-2 [17.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-9cross1 [201 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.32-1cross4 [1100 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armhf-cross all 11.2.0-9cross1 [36.4 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 11.2.0-9cross1 [86.5 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 11.2.0-9cross1 [6676 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armhf-cross all 11.2.0-9cross1 [1963 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 11.2.0-9cross1 [438 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 11.2.0-9cross1 [797 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-armhf-cross all 11.2.0-9cross1 [711 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [54.8 MB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:11.2.0-2 [1460 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 5.10.46-4cross4 [1436 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.32-1cross4 [1762 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-armhf-cross all 11.2.0-9cross1 [1960 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-arm-linux-gnueabihf amd64 11.2.0-9cross1 [52.4 MB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:11.2.0-2 [1180 B] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-2 [26.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-2 [15.5 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.2 [1056 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 icu-devtools amd64 67.1-7 [201 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-s1 armhf 11.2.0-10 [36.4 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.32-4 [2340 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armhf libasan6 armhf 11.2.0-10 [1971 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 11.2.0-10 [6908 B] Get:91 http://debian.oregonstate.edu/debian unstable/main armhf libblas3 armhf 3.10.0-1 [112 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armhf libblas-dev armhf 3.10.0-1 [122 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 11.2.0-10 [88.7 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 11.2.0-10 [479 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 11.2.0-10 [798 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-10-dev armhf 10.3.0-12 [690 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 5.14.16-1 [1408 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt1 armhf 1:4.4.26-1 [95.8 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armhf libcrypt-dev armhf 1:4.4.26-1 [111 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armhf libcom-err2 armhf 1.46.4-1 [74.4 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5support0 armhf 1.18.3-7 [62.5 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main armhf libk5crypto3 armhf 1.18.3-7 [110 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armhf libkeyutils1 armhf 1.6.1-2 [14.4 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armhf libssl1.1 armhf 1.1.1l-1 [1311 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armhf libkrb5-3 armhf 1.18.3-7 [319 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armhf libgssapi-krb5-2 armhf 1.18.3-7 [143 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc3 armhf 1.3.2-2 [72.7 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armhf libtirpc-dev armhf 1.3.2-2 [182 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.32-4 [1793 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-10-dev armhf 10.3.0-12 [1812 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armhf libboost1.74-dev armhf 1.74.0-11 [9533 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armhf libboost-dev armhf 1.74.0.3 [4548 B] Get:115 http://debian.oregonstate.edu/debian unstable/main armhf libicu67 armhf 67.1-7 [8319 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armhf libboost-regex1.74.0 armhf 1.74.0-11 [459 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armhf libicu-dev armhf 67.1-7 [9343 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armhf libboost-regex1.74-dev armhf 1.74.0-11 [570 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-1.0 armhf 1.0.8-4 [44.6 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armhf liblzma5 armhf 5.2.5-2 [159 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armhf libzstd1 armhf 1.4.8+dfsg-3 [271 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-2 [85.4 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armhf libboost-iostreams1.74.0 armhf 1.74.0-11 [260 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armhf libboost-iostreams1.74-dev armhf 1.74.0-11 [271 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armhf libboost-iostreams-dev armhf 1.74.0.3 [4316 B] Get:126 http://debian.oregonstate.edu/debian unstable/main armhf libboost-program-options1.74.0 armhf 1.74.0-11 [339 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armhf libboost-program-options1.74-dev armhf 1.74.0-11 [383 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armhf libboost-program-options-dev armhf 1.74.0.3 [4340 B] Get:129 http://debian.oregonstate.edu/debian unstable/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armhf libgmp10 armhf 2:6.2.1+dfsg-3 [513 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armhf libnettle8 armhf 3.7.3-1 [284 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armhf libhogweed6 armhf 3.7.3-1 [308 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armhf libunistring2 armhf 0.9.10-6 [374 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armhf libidn2-0 armhf 2.3.2-2 [92.9 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armhf libffi8 armhf 3.4.2-3 [21.3 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armhf libp11-kit0 armhf 0.24.0-5 [325 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armhf libtasn1-6 armhf 4.18.0-4 [51.0 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armhf libgnutls30 armhf 3.7.2-2 [1292 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.8 [596 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.3 [68.4 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.3 [99.8 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armhf libldap-2.4-2 armhf 2.4.59+dfsg-1 [211 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armhf libnghttp2-14 armhf 1.43.0-1 [65.6 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main armhf libssh2-1 armhf 1.10.0-2 [163 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main armhf libcurl3-gnutls armhf 7.79.1-2 [321 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armhf libcurl4-gnutls-dev armhf 7.79.1-2 [420 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armhf libdeflate0 armhf 1.8-1 [43.1 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armhf libdeflate-dev armhf 1.8-1 [39.8 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.70.1-1 [1403 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main amd64 libeigen3-dev all 3.3.9-2 [858 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armhf libgslcblas0 armhf 2.7+dfsg-2 [83.0 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main armhf libgsl25 armhf 2.7+dfsg-2 [774 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armhf libgsl-dev armhf 2.7+dfsg-2 [977 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armhf libhtscodecs2 armhf 1.1.1-3+b1 [50.0 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armhf libhts3 armhf 1.13+ds-2 [348 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armhf liblzma-dev armhf 5.2.5-2 [220 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main armhf libhts-dev armhf 1.13+ds-2 [4050 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main armhf r-mathlib armhf 4.1.2-1 [2185 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 315 MB in 3s (126 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10557 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.37.2-4_amd64.deb ... Unpacking bsdextrautils (2.37.2-4) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.4-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.4-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.1-6_all.deb ... Unpacking perl-modules-5.32 (5.32.1-6) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.1-6_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-6) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.1-6_amd64.deb ... Unpacking perl (5.32.1-6) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-10-base:armhf. Preparing to unpack .../009-gcc-10-base_10.3.0-12_armhf.deb ... Unpacking gcc-10-base:armhf (10.3.0-12) ... Selecting previously unselected package gcc-11-base:armhf. Preparing to unpack .../010-gcc-11-base_11.2.0-10_armhf.deb ... Unpacking gcc-11-base:armhf (11.2.0-10) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. 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Unpacking libhts-dev:armhf (1.13+ds-2) ... Selecting previously unselected package r-mathlib:armhf. Preparing to unpack .../160-r-mathlib_4.1.2-1_armhf.deb ... Unpacking r-mathlib:armhf (4.1.2-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armhf. Preparing to unpack .../161-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.4-1) ... Setting up gcc-11-base:armhf (11.2.0-10) ... Setting up libc6-armhf-cross (2.32-1cross4) ... Setting up bsdextrautils (2.37.2-4) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.70.1-1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.1-6) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:armhf (5.14.16-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up gcc-10-base:armhf (10.3.0-12) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up gcc-11-arm-linux-gnueabihf-base:amd64 (11.2.0-9cross1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up linux-libc-dev-armhf-cross (5.10.46-4cross4) ... Setting up autopoint (0.21-4) ... Setting up icu-devtools (67.1-7) ... Setting up libperl5.32:amd64 (5.32.1-6) ... Setting up gcc-11-cross-base (11.2.0-9cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.26-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.32-4) ... Setting up binutils-arm-linux-gnueabihf (2.37-9) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up cpp-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up libgomp1-armhf-cross (11.2.0-9cross1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libgcc-s1-armhf-cross (11.2.0-9cross1) ... Setting up libc6-dev-armhf-cross (2.32-1cross4) ... Setting up m4 (1.4.18-5) ... Setting up libatomic1-armhf-cross (11.2.0-9cross1) ... Setting up perl (5.32.1-6) ... Setting up libstdc++6-armhf-cross (11.2.0-9cross1) ... Setting up libasan6-armhf-cross (11.2.0-9cross1) ... Setting up libubsan1-armhf-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.71-2) ... Setting up libstdc++-11-dev:amd64 (11.2.0-10) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up automake (1:1.16.5-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up libgcc-11-dev-armhf-cross (11.2.0-9cross1) ... Setting up libstdc++-11-dev-armhf-cross (11.2.0-9cross1) ... Setting up pkg-config (0.29.2-1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up gcc-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up libfile-stripnondeterminism-perl (1.12.0-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libeigen3-dev (3.3.9-2) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-2) ... Setting up g++-11-arm-linux-gnueabihf (11.2.0-9cross1) ... Setting up g++-arm-linux-gnueabihf (4:11.2.0-2) ... Setting up debhelper (13.5.2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (11.2.0-10) ... Setting up libc6:armhf (2.32-4) ... Setting up libffi8:armhf (3.4.2-3) ... Setting up libtasn1-6:armhf (4.18.0-4) ... Setting up r-mathlib:armhf (4.1.2-1) ... Setting up libbz2-1.0:armhf (1.0.8-4) ... Setting up libdb5.3:armhf (5.3.28+dfsg1-0.8) ... Setting up libstdc++6:armhf (11.2.0-10) ... Setting up libhtscodecs2:armhf (1.1.1-3+b1) ... Setting up libzstd1:armhf (1.4.8+dfsg-3) ... Setting up libkeyutils1:armhf (1.6.1-2) ... Setting up liblzma5:armhf (5.2.5-2) ... Setting up libicu67:armhf (67.1-7) ... Setting up libgslcblas0:armhf (2.7+dfsg-2) ... Setting up libgsl25:armhf (2.7+dfsg-2) ... Setting up libboost-program-options1.74.0:armhf (1.74.0-11) ... Setting up libssl1.1:armhf (1.1.1l-1) ... Setting up libbrotli1:armhf (1.0.9-2+b2) ... Setting up libnghttp2-14:armhf (1.43.0-1) ... Setting up libunistring2:armhf (0.9.10-6) ... Setting up libdeflate0:armhf (1.8-1) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-2) ... Setting up libcrypt1:armhf (1:4.4.26-1) ... Setting up libidn2-0:armhf (2.3.2-2) ... Setting up libcom-err2:armhf (1.46.4-1) ... Setting up libgomp1:armhf (11.2.0-10) ... Setting up libasan6:armhf (11.2.0-10) ... Setting up libkrb5support0:armhf (1.18.3-7) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2.3) ... Setting up libblas3:armhf (3.10.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libnettle8:armhf (3.7.3-1) ... Setting up libgmp10:armhf (2:6.2.1+dfsg-3) ... Setting up libboost-regex1.74.0:armhf (1.74.0-11) ... Setting up libp11-kit0:armhf (0.24.0-5) ... Setting up libatomic1:armhf (11.2.0-10) ... Setting up libk5crypto3:armhf (1.18.3-7) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2.3) ... Setting up liblzma-dev:armhf (5.2.5-2) ... Setting up libubsan1:armhf (11.2.0-10) ... Setting up libcrypt-dev:armhf (1:4.4.26-1) ... Setting up libssh2-1:armhf (1.10.0-2) ... Setting up libkrb5-3:armhf (1.18.3-7) ... Setting up libdeflate-dev:armhf (1.8-1) ... Setting up libblas-dev:armhf (3.10.0-1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libpsl5:armhf (0.21.0-1.2) ... Setting up libgsl-dev:armhf (2.7+dfsg-2) ... Setting up libhogweed6:armhf (3.7.3-1) ... Setting up libboost-iostreams1.74.0:armhf (1.74.0-11) ... Setting up libgcc-10-dev:armhf (10.3.0-12) ... Setting up libgnutls30:armhf (3.7.2-2) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:armhf (1.18.3-7) ... Setting up libtirpc3:armhf (1.3.2-2) ... Setting up libldap-2.4-2:armhf (2.4.59+dfsg-1) ... Setting up libcurl3-gnutls:armhf (7.79.1-2) ... Setting up libcurl4-gnutls-dev:armhf (7.79.1-2) ... Setting up libtirpc-dev:armhf (1.3.2-2) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libhts3:armhf (1.13+ds-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.32-4) ... Setting up libicu-dev:armhf (67.1-7) ... Setting up libstdc++-10-dev:armhf (10.3.0-12) ... Setting up libboost1.74-dev:armhf (1.74.0-11) ... Setting up libboost-program-options1.74-dev:armhf (1.74.0-11) ... Setting up libboost-program-options-dev:armhf (1.74.0.3) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libboost-regex1.74-dev:armhf (1.74.0-11) ... Setting up libboost-dev:armhf (1.74.0.3) ... Setting up libhts-dev:armhf (1.13+ds-2) ... Setting up libboost-iostreams1.74-dev:armhf (1.74.0-11) ... Setting up libboost-iostreams-dev:armhf (1.74.0.3) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-9 dpkg-dev_1.20.9 g++-11_11.2.0-10 gcc-11_11.2.0-10 libc6-dev_2.32-4 libstdc++-10-dev_10.3.0-12 libstdc++-11-dev_11.2.0-10 libstdc++-11-dev-armhf-cross_11.2.0-9cross1 libstdc++6_11.2.0-10 libstdc++6-armhf-cross_11.2.0-9cross1 linux-libc-dev_5.14.16-1 Package versions: adduser_3.118 apt_2.3.11 autoconf_2.71-2 automake_1:1.16.5-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3.1 binutils_2.37-9 binutils-arm-linux-gnueabihf_2.37-9 binutils-common_2.37-9 binutils-x86-64-linux-gnu_2.37-9 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-10 cpp-11-arm-linux-gnueabihf_11.2.0-9cross1 cpp-8_8.4.0-7 cpp-arm-linux-gnueabihf_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-armhf_12.9 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-2 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.26-1 fdisk_2.37.2-4 file_1:5.39-3 findutils_4.8.0-1 g++_4:11.2.0-2 g++-11_11.2.0-10 g++-11-arm-linux-gnueabihf_11.2.0-9cross1 g++-arm-linux-gnueabihf_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-12 gcc-11_11.2.0-10 gcc-11-arm-linux-gnueabihf_11.2.0-9cross1 gcc-11-arm-linux-gnueabihf-base_11.2.0-9cross1 gcc-11-base_11.2.0-10 gcc-11-cross-base_11.2.0-9cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-3 gcc-arm-linux-gnueabihf_4:11.2.0-2 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 icu-devtools_67.1-7 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.3.11 libarchive-zip-perl_1.68-1 libasan5_9.4.0-3 libasan6_11.2.0-10 libasan6-armhf-cross_11.2.0-9cross1 libatomic1_11.2.0-10 libatomic1-armhf-cross_11.2.0-9cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.6-1 libaudit1_1:3.0.6-1 libbinutils_2.37-9 libblas-dev_3.10.0-1 libblas3_3.10.0-1 libblkid1_2.37.2-4 libboost-dev_1.74.0.3 libboost-iostreams-dev_1.74.0.3 libboost-iostreams1.74-dev_1.74.0-11 libboost-iostreams1.74.0_1.74.0-11 libboost-program-options-dev_1.74.0.3 libboost-program-options1.74-dev_1.74.0-11 libboost-program-options1.74.0_1.74.0-11 libboost-regex1.74-dev_1.74.0-11 libboost-regex1.74.0_1.74.0-11 libboost1.74-dev_1.74.0-11 libbrotli1_1.0.9-2+b2 libbz2-1.0_1.0.8-4 libc-bin_2.32-4 libc-dev-bin_2.32-4 libc6_2.32-4 libc6-armhf-cross_2.32-1cross4 libc6-dev_2.32-4 libc6-dev-armhf-cross_2.32-1cross4 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-10 libcom-err2_1.46.4-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.26-1 libcrypt1_1:4.4.26-1 libctf-nobfd0_2.37-9 libctf0_2.37-9 libcurl3-gnutls_7.79.1-2 libcurl4-gnutls-dev_7.79.1-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.5.2 libdebian-dpkgcross-perl_2.6.18+nmu2 libdeflate-dev_1.8-1 libdeflate0_1.8-1 libdpkg-perl_1.20.9 libeigen3-dev_3.3.9-2 libelf1_0.185-2 libext2fs2_1.46.4-1 libfakeroot_1.26-1 libfdisk1_2.37.2-4 libffi6_3.2.1-9 libffi8_3.4.2-3 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-2 libfile-which-perl_1.23-1 libgcc-10-dev_10.3.0-12 libgcc-11-dev_11.2.0-10 libgcc-11-dev-armhf-cross_11.2.0-9cross1 libgcc-s1_11.2.0-10 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xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fastqtl Binary: fastqtl, fastqtl-doc Architecture: any all Version: 2.184+dfsg-8 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Homepage: http://fastqtl.sourceforge.net/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/fastqtl Vcs-Git: https://salsa.debian.org/med-team/fastqtl.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev Package-List: fastqtl deb science optional arch=any fastqtl-doc deb doc optional arch=all Checksums-Sha1: a334f112c2fc8e39613d6dfbfdf390c54a8e6ccd 17122060 fastqtl_2.184+dfsg.orig.tar.xz b6f7de0c0a11f63c999f5d1a3f03c0ee579b1ed1 19768 fastqtl_2.184+dfsg-8.debian.tar.xz Checksums-Sha256: 5f40bf8d9dbce2cd738080ebe28bf2b3892b75c9a8446e5e1d8c293d4b382b65 17122060 fastqtl_2.184+dfsg.orig.tar.xz ce1ea834d3bc6e1344d36edfdf9cc5a39bbbf98e7126acae38f66193bc240e55 19768 fastqtl_2.184+dfsg-8.debian.tar.xz Files: 8db4d2905b2f2b659e40f70a6ccdfa8d 17122060 fastqtl_2.184+dfsg.orig.tar.xz 3959a35e77485f1f03b06b7f98705c82 19768 fastqtl_2.184+dfsg-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmF0BtESHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nxuiAP/0g9MyxIdsN+6a+NMbR2jPyUQK58z+oJ X0HbEApr0A0HPg2yVY9BejXJNFS8VzLDWnPDRfkqUHMdar+BxCqD7Kx8a2+gVtHB aQFP1CRwaBZrwclQS7/bpPS3ii6E6A7mn4FQlzknxjrz4pZQusv16QDKUBj3ctJg /3HRbF1DoV7nFUwKRFkSrQeL5axAjvUok5MS/1+T9n8sAdRcgHFHt60JC8Owph77 1r1EVZ2+pG8qU3KKRqx7AEuEdwqN2IQ440ZIxAcub7dCVGt5TeOdYws1N9ze7sos 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fastqtl_2.184+dfsg-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile_dynamic_hardenings.patch dpkg-source: info: applying 02_Replace_libtabix_by_libhts.patch dpkg-source: info: applying 03_Reproducible_builds.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-395a4503-64e3-488d-8ff2-fbead0073add SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package fastqtl dpkg-buildpackage: info: source version 2.184+dfsg-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f obj/*.o bin/fastQTL make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' mkdir -p /<>/obj/ mkdir -p /<>/bin/ dh_auto_build -- CXXFLAGS='-g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc "CXXFLAGS=-g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14" make[2]: Entering directory '/<>' arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisMapping.o -c src/analysisMapping.cpp -Isrc In file included from src/analysisMapping.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisNominal.o -c src/analysisNominal.cpp -Isrc In file included from src/analysisNominal.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutation.o -c src/analysisPermutation.cpp -Isrc In file included from src/analysisPermutation.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutation(std::string, std::vector)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutation.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationInteraction.o -c src/analysisPermutationInteraction.cpp -Isrc In file included from src/analysisPermutationInteraction.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationPerGroup.o -c src/analysisPermutationPerGroup.cpp -Isrc In file included from src/analysisPermutationPerGroup.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutationPerGroup(std::string, std::vector)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationPerGroup.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationSequence.o -c src/analysisPermutationSequence.cpp -Isrc In file included from src/analysisPermutationSequence.cpp:17: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:67, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h: In member function ‘void data::runPermutation(std::string, std::string)’: /usr/arm-linux-gnueabihf/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/11/vector:72, from src/utils/utils.h:46, from src/data.h:25, from src/analysisPermutationSequence.cpp:17: /usr/arm-linux-gnueabihf/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/commands.o -c src/commands.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/df.o -c src/df.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/fastQTL.o -c src/fastQTL.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/management.o -c src/management.cpp -Isrc In file included from src/management.cpp:20: src/data.h: In member function ‘double data::getCorrelation(std::vector&, std::vector&)’: src/data.h:170:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 170 | case 3: sum0 += vec1[i+2] * vec2[i+2]; src/data.h:171:9: note: here 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; | ^~~~ src/data.h:171:22: warning: this statement may fall through [-Wimplicit-fallthrough=] 171 | case 2: sum0 += vec1[i+1] * vec2[i+1]; src/data.h:172:9: note: here 172 | case 1: sum0 += vec1[i+0] * vec2[i+0]; | ^~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/mle.o -c src/mle.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readCovariates.o -c src/readCovariates.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readGenotypes.o -c src/readGenotypes.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readGroups.o -c src/readGroups.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readInclusionsExclusions.o -c src/readInclusionsExclusions.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readInteractions.o -c src/readInteractions.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readPhenotypes.o -c src/readPhenotypes.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readThresholds.o -c src/readThresholds.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/residualizer.o -c src/residualizer.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/tabix.o -c src/utils/tabix.cpp -Isrc src/utils/tabix.cpp: In constructor ‘Tabix::Tabix(std::string&)’: src/utils/tabix.cpp:17:22: warning: ‘int bgzf_is_bgzf(const char*)’ is deprecated: Use bgzf_compression() or hts_detect_format() instead [-Wdeprecated-declarations] 17 | if ( bgzf_is_bgzf(cfilename)!=1 ) | ~~~~~~~~~~~~^~~~~~~~~~~ In file included from src/utils/tabix.hpp:12, from src/utils/tabix.cpp:6: /usr/include/htslib/bgzf.h:263:9: note: declared here 263 | int bgzf_is_bgzf(const char *fn) HTS_DEPRECATED("Use bgzf_compression() or hts_detect_format() instead"); | ^~~~~~~~~~~~ arm-linux-gnueabihf-g++ -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/utils.o -c src/utils/utils.cpp -Isrc arm-linux-gnueabihf-g++ -O3 -Wl,-z,relro -Wl,-z,now obj/analysisMapping.o obj/analysisNominal.o obj/analysisPermutation.o obj/analysisPermutationInteraction.o obj/analysisPermutationPerGroup.o obj/analysisPermutationSequence.o obj/commands.o obj/df.o obj/fastQTL.o obj/management.o obj/mle.o obj/readCovariates.o obj/readGenotypes.o obj/readGroups.o obj/readInclusionsExclusions.o obj/readInteractions.o obj/readPhenotypes.o obj/readThresholds.o obj/residualizer.o obj/tabix.o obj/utils.o -lRmath -lhts -lm -lz -lboost_iostreams -lboost_program_options -lgsl -lblas -o bin/fastQTL make[2]: Leaving directory '/<>' cd /<>/example/ && \ tar Jcvf examples.tar.xz * --sort=name --mode=go=rX,u+rw,a-s --owner=root --group=root --numeric-owner covariates.txt.gz genotypes.vcf.gz genotypes.vcf.gz.tbi interaction.txt phenotypes.bed.gz phenotypes.bed.gz.tbi make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/fastqtl/usr/bin/fastQTL contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fastqtl/usr/bin/fastQTL was not linked against libblas.so.3 (it uses none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'fastqtl' in '../fastqtl_2.184+dfsg-8_armhf.deb'. dpkg-deb: building package 'fastqtl-dbgsym' in '../fastqtl-dbgsym_2.184+dfsg-8_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../fastqtl_2.184+dfsg-8_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-11-16T05:21:34Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fastqtl_2.184+dfsg-8_armhf.changes: ----------------------------------- Format: 1.8 Date: Sat, 23 Oct 2021 18:14:58 +0530 Source: fastqtl Binary: fastqtl fastqtl-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.184+dfsg-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: fastqtl - Quantitative Trait Loci (QTL) mapper in cis for molecular phenoty Changes: fastqtl (2.184+dfsg-8) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * d/u/metadata: yamllint . [ Dylan Aïssi ] * Update my email . [ Nilesh Patra ] * d/rules: Force -std=c++14 * Bump debhelper compatibility level to 13 * Bump Standards-Version to 4.6.0 (no changes needed) * Replace deprecated ADTTMP with AUTOPKGTEST_TMP * Add "Rules-Requires-Root: no" * Update override Checksums-Sha1: 6ea6a5d4725e44c312552382a7e8649bec225396 5085152 fastqtl-dbgsym_2.184+dfsg-8_armhf.deb e78658f5f54204e01fd6b7e206ef1c32d30c5259 6335 fastqtl_2.184+dfsg-8_armhf.buildinfo 032b1bea70008983162b2162da5b5bda593f27c9 165920 fastqtl_2.184+dfsg-8_armhf.deb Checksums-Sha256: 5d7832def373ae167662a2a1a619a252964c23abcf5a5665018896ed84fa6f25 5085152 fastqtl-dbgsym_2.184+dfsg-8_armhf.deb 31b9a3be13d429a41320b7de61dceda5316114b5bd0671b15ecd849407aa4388 6335 fastqtl_2.184+dfsg-8_armhf.buildinfo fc51019c276b4409bdb3696e39ee2cdd6f729712798c32e37115da8c98020dde 165920 fastqtl_2.184+dfsg-8_armhf.deb Files: 9a7ca2fad3cf1064cd3ba935c4dddc29 5085152 debug optional fastqtl-dbgsym_2.184+dfsg-8_armhf.deb a4dfecc11150d6f142713ca31398d4aa 6335 science optional fastqtl_2.184+dfsg-8_armhf.buildinfo ce5cb0de333203b5349e54673025c1c7 165920 science optional fastqtl_2.184+dfsg-8_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: fastqtl Binary: fastqtl fastqtl-dbgsym Architecture: armhf Version: 2.184+dfsg-8 Checksums-Md5: 9a7ca2fad3cf1064cd3ba935c4dddc29 5085152 fastqtl-dbgsym_2.184+dfsg-8_armhf.deb ce5cb0de333203b5349e54673025c1c7 165920 fastqtl_2.184+dfsg-8_armhf.deb Checksums-Sha1: 6ea6a5d4725e44c312552382a7e8649bec225396 5085152 fastqtl-dbgsym_2.184+dfsg-8_armhf.deb 032b1bea70008983162b2162da5b5bda593f27c9 165920 fastqtl_2.184+dfsg-8_armhf.deb Checksums-Sha256: 5d7832def373ae167662a2a1a619a252964c23abcf5a5665018896ed84fa6f25 5085152 fastqtl-dbgsym_2.184+dfsg-8_armhf.deb fc51019c276b4409bdb3696e39ee2cdd6f729712798c32e37115da8c98020dde 165920 fastqtl_2.184+dfsg-8_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 16 Nov 2021 05:21:33 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 12), base-passwd (= 3.5.52), bash (= 5.1-3.1), binutils (= 2.37-9), binutils-common (= 2.37-9), binutils-x86-64-linux-gnu (= 2.37-9), bsdextrautils (= 2.37.2-4), bsdutils (= 1:2.37.2-4), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-10), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.5.2), debianutils (= 5.5-1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-2), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-10), gcc (= 4:11.2.0-2), gcc-10-base (= 10.3.0-12), gcc-11 (= 11.2.0-10), gcc-11-base (= 11.2.0-10), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4), hostname (= 3.23), icu-devtools (= 67.1-7), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-10), libatomic1 (= 11.2.0-10), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.6-1), libaudit1 (= 1:3.0.6-1), libbinutils (= 2.37-9), libblas-dev (= 3.10.0-1), libblas3 (= 3.10.0-1), libblkid1 (= 2.37.2-4), libboost-dev (= 1.74.0.3), libboost-iostreams-dev (= 1.74.0.3), libboost-iostreams1.74-dev (= 1.74.0-11), libboost-iostreams1.74.0 (= 1.74.0-11), libboost-program-options-dev (= 1.74.0.3), libboost-program-options1.74-dev (= 1.74.0-11), libboost-program-options1.74.0 (= 1.74.0-11), libboost-regex1.74-dev (= 1.74.0-11), libboost-regex1.74.0 (= 1.74.0-11), libboost1.74-dev (= 1.74.0-11), libbrotli1 (= 1.0.9-2+b2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.32-4), libc-dev-bin (= 2.32-4), libc6 (= 2.32-4), libc6-dev (= 2.32-4), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 11.2.0-10), libcom-err2 (= 1.46.4-1), libcrypt-dev (= 1:4.4.26-1), libcrypt1 (= 1:4.4.26-1), libctf-nobfd0 (= 2.37-9), libctf0 (= 2.37-9), libcurl3-gnutls (= 7.79.1-2), libcurl4-gnutls-dev (= 7.79.1-2), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.5.2), libdeflate-dev (= 1.8-1), libdeflate0 (= 1.8-1), libdpkg-perl (= 1.20.9), libeigen3-dev (= 3.3.9-2), libelf1 (= 0.185-2), libffi8 (= 3.4.2-3), libfile-stripnondeterminism-perl (= 1.12.0-2), libgcc-10-dev (= 10.3.0-12), libgcc-11-dev (= 11.2.0-10), libgcc-s1 (= 11.2.0-10), libgcrypt20 (= 1.9.4-3+b1), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libglib2.0-0 (= 2.70.1-1), libgmp10 (= 2:6.2.1+dfsg-3), libgnutls30 (= 3.7.2-2), libgomp1 (= 11.2.0-10), libgpg-error0 (= 1.42-3), libgsl-dev (= 2.7+dfsg-2), libgsl25 (= 2.7+dfsg-2), libgslcblas0 (= 2.7+dfsg-2), libgssapi-krb5-2 (= 1.18.3-7), libhogweed6 (= 3.7.3-1), libhts-dev (= 1.13+ds-2), libhts3 (= 1.13+ds-2), libhtscodecs2 (= 1.1.1-3+b1), libicu-dev (= 67.1-7), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 11.2.0-10), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), libldap-2.4-2 (= 2.4.59+dfsg-1), liblsan0 (= 11.2.0-10), liblz4-1 (= 1.9.3-2), liblzma-dev (= 5.2.5-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.37.2-4), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.0-5), libpam-modules (= 1.4.0-10), libpam-modules-bin (= 1.4.0-10), libpam-runtime (= 1.4.0-10), libpam0g (= 1.4.0-10), libpcre2-8-0 (= 10.39-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.4-1), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 11.2.0-10), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2.3), libsasl2-modules-db (= 2.1.27+dfsg-2.3), libseccomp2 (= 2.5.2-2), libselinux1 (= 3.3-1), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.37.2-4), libssh2-1 (= 1.10.0-2), libssl1.1 (= 1.1.1l-1), libstdc++-10-dev (= 10.3.0-12), libstdc++-11-dev (= 11.2.0-10), libstdc++6 (= 11.2.0-10), libsub-override-perl (= 0.09-2), libsystemd0 (= 249.6-2), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-10), libubsan1 (= 11.2.0-10), libuchardet0 (= 0.0.7-1), libudev1 (= 249.6-2), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-4), libxml2 (= 2.9.12+dfsg-5), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.14.16-1), login (= 1:4.8.1-2), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.3-1), ncurses-bin (= 6.3-1), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), pkg-config (= 0.29.2-1), po-debconf (= 1.0.21+nmu1), r-mathlib (= 4.1.2-1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.00-1), tar (= 1.34+dfsg-1), util-linux (= 2.37.2-4), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1634993098" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fastqtl-dbgsym_2.184+dfsg-8_armhf.deb ------------------------------------- new Debian package, version 2.0. size 5085152 bytes: control archive=540 bytes. 381 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: fastqtl-dbgsym Source: fastqtl Version: 2.184+dfsg-8 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 5152 Depends: fastqtl (= 2.184+dfsg-8) Section: debug Priority: optional Description: debug symbols for fastqtl Build-Ids: 2678ef396c27ef4611a8a78a7b0eb7acc55198b2 drwxr-xr-x root/root 0 2021-10-23 12:44 ./ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/lib/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/lib/debug/.build-id/26/ -rw-r--r-- root/root 5264708 2021-10-23 12:44 ./usr/lib/debug/.build-id/26/78ef396c27ef4611a8a78a7b0eb7acc55198b2.debug drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-10-23 12:44 ./usr/share/doc/fastqtl-dbgsym -> fastqtl fastqtl_2.184+dfsg-8_armhf.deb ------------------------------ new Debian package, version 2.0. size 165920 bytes: control archive=1088 bytes. 1084 bytes, 19 lines control 328 bytes, 5 lines md5sums Package: fastqtl Version: 2.184+dfsg-8 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 424 Depends: libblas3 | libblas.so.3, libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgsl25 (>= 2.6), libhts3 (>= 1.10), libstdc++6 (>= 11), r-mathlib Suggests: fastqtl-doc Section: science Priority: optional Homepage: http://fastqtl.sourceforge.net/ Description: Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels. drwxr-xr-x root/root 0 2021-10-23 12:44 ./ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/bin/ -rwxr-xr-x root/root 378384 2021-10-23 12:44 ./usr/bin/fastQTL drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/doc/fastqtl/ -rw-r--r-- root/root 1106 2021-10-23 12:44 ./usr/share/doc/fastqtl/changelog.Debian.gz -rw-r--r-- root/root 38452 2021-10-23 12:30 ./usr/share/doc/fastqtl/copyright drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/lintian/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 184 2021-10-23 12:44 ./usr/share/lintian/overrides/fastqtl drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/man/ drwxr-xr-x root/root 0 2021-10-23 12:44 ./usr/share/man/man1/ -rw-r--r-- root/root 1573 2021-10-23 12:44 ./usr/share/man/man1/fastQTL.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [589 B] Get:5 copy:/<>/apt_archive ./ Packages [670 B] Fetched 2222 B in 0s (84.8 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 7877 kB of archives. After this operation, 22.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.25-1 [19.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.27-1 [17.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.27-1 [129 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-1+b5 [104 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-1 [10.7 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-2 [60.4 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.120-1 [54.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.008-1+b1 [12.0 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1 [46.5 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.21-1 [50.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.26-1 [28.7 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1 [197 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012004-1 [351 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-4 [88.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.112.0 [1345 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7877 kB in 0s (27.7 MB/s) Selecting previously unselected package diffstat. (Reading database ... 38025 files and directories currently installed.) Preparing to unpack .../000-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../001-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../002-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../003-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package gpg. Preparing to unpack .../004-gpg_2.2.27-2_amd64.deb ... Unpacking gpg (2.2.27-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../005-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. 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Unpacking libhtml-html5-entities-perl (0.004-1.1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../054-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../055-libio-interactive-perl_1.023-1_all.deb ... Unpacking libio-interactive-perl (1.023-1) ... Selecting previously unselected package libio-prompt-tiny-perl. Preparing to unpack .../056-libio-prompt-tiny-perl_0.003-1_all.deb ... Unpacking libio-prompt-tiny-perl (0.003-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../057-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../058-libjson-maybexs-perl_1.004003-1_all.deb ... Unpacking libjson-maybexs-perl (1.004003-1) ... 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Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../065-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../066-libmoo-perl_2.005004-2_all.deb ... Unpacking libmoo-perl (2.005004-2) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../067-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../068-libmoox-aliases-perl_0.001006-1.1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1.1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../069-libmouse-perl_2.5.10-1+b1_amd64.deb ... Unpacking libmouse-perl (2.5.10-1+b1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../070-libpackage-stash-perl_0.39-1_all.deb ... Unpacking libpackage-stash-perl (0.39-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../071-libsub-identify-perl_0.14-1+b3_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b3) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../072-libsub-name-perl_0.26-1+b1_amd64.deb ... Unpacking libsub-name-perl (0.26-1+b1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../073-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../074-libpath-tiny-perl_0.120-1_all.deb ... Unpacking libpath-tiny-perl (0.120-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../075-libperlio-gzip-perl_0.19-1+b7_amd64.deb ... Unpacking libperlio-gzip-perl (0.19-1+b7) ... 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 101668 Build-Time: 141 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 47 Job: fastqtl_2.184+dfsg-8 Lintian: pass Machine Architecture: amd64 Package: fastqtl Package-Time: 204 Source-Version: 2.184+dfsg-8 Space: 101668 Status: successful Version: 2.184+dfsg-8 -------------------------------------------------------------------------------- Finished at 2021-11-16T05:21:34Z Build needed 00:03:24, 101668k disk space