sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | fermi-lite 0.1-12 (mipsel) Sat, 04 Apr 2020 09:13:50 +0000 | +==============================================================================+ Package: fermi-lite Version: 0.1-12 Source Version: 0.1-12 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-965622d2-2388-4600-a7f9-c3ca3594b566' with '<>' I: NOTICE: Log filtering will replace 'build/fermi-lite-e4BQ2F/resolver-buAVRC' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-04-0801.27.pdiff [6801 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-04-04-0801.27.pdiff [6801 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-04-0801.27.pdiff [26.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-04-04-0801.27.pdiff [26.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [7907 kB] Fetched 8142 kB in 1s (5679 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'fermi-lite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fermi-lite.git Please use: git clone https://salsa.debian.org/med-team/fermi-lite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 295 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main fermi-lite 0.1-12 (dsc) [2113 B] Get:2 http://debian.oregonstate.edu/debian unstable/main fermi-lite 0.1-12 (tar) [248 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main fermi-lite 0.1-12 (diff) [45.5 kB] Fetched 295 kB in 0s (5364 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/fermi-lite-e4BQ2F/fermi-lite-0.1' with '<>' I: NOTICE: Log filtering will replace 'build/fermi-lite-e4BQ2F' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [421 B] Get:5 copy:/<>/apt_archive ./ Packages [513 B] Fetched 1891 B in 0s (80.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdmainutils build-essential cpp-9-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-9-base:mipsel gcc-9-cross-base-mipsen gcc-9-mipsel-linux-gnu gcc-9-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbsd0 libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mipsel libgcc-9-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libglib2.0-0 libgomp1:mipsel libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:mipsel libstdc++-9-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mipsel-linux-gnu gcc-9-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel glibc-doc manpages-dev:mipsel libstdc++-9-doc libstdc++-9-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mipsel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdmainutils build-essential cpp-9-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-9-base:mipsel gcc-9-cross-base-mipsen gcc-9-mipsel-linux-gnu gcc-9-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbsd0 libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mipsel libgcc-9-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libglib2.0-0 libgomp1:mipsel libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:mipsel libstdc++-9-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:mipsel sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 75.1 MB of archives. After this operation, 301 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-10-base mipsel 10-20200402-1 [196 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-9-base mipsel 9.3.0-9 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.34-5cross6 [2309 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.15-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-4 [2629 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-9 [1677 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-9 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mipsel-linux-gnu-base amd64 9.3.0-8cross1 [196 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [6465 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:9.2.1-4.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.3.0-8cross1 [192 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10-20200324-1cross1 [192 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.30-2cross1 [1199 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mipsel-cross all 10-20200324-1cross1 [46.6 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 10-20200324-1cross1 [90.3 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 10-20200324-1cross1 [6652 B] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mipsel-cross all 9.3.0-8cross1 [223 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [6819 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:9.2.1-4.1 [1460 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 10-20200324-1cross1 [395 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 5.4.19-1cross1 [1166 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.30-2cross1 [2274 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mipsel-cross all 9.3.0-8cross1 [1708 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mipsel-linux-gnu amd64 9.3.0-8cross1 [7051 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:9.2.1-4.1 [1176 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.8 [6684 B] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.90 [17.5 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.10 [184 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.1-1 [1341 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.10 [1003 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.13 [181 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-s1 mipsel 10-20200402-1 [46.2 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt1 mipsel 1:4.4.15-1 [113 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.30-4 [2419 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 10-20200402-1 [6708 B] Get:86 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 5.5.13-2 [1079 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt-dev mipsel 1:4.4.15-1 [134 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.30-4 [2271 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 10-20200402-1 [92.2 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-9-dev mipsel 9.3.0-9 [222 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 10-20200402-1 [435 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-9-dev mipsel 9.3.0-9 [1692 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g mipsel 1:1.2.11.dfsg-2 [88.2 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g-dev mipsel 1:1.2.11.dfsg-2 [190 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 75.1 MB in 1s (115 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12626 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Setting up linux-libc-dev:mipsel (5.5.13-2) ... Setting up libc6-mipsel-cross (2.30-2cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-cross-base-mipsen (9.3.0-8cross1) ... Setting up gcc-9-mipsel-linux-gnu-base:amd64 (9.3.0-8cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:mipsel (10-20200402-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up gcc-10-cross-base-mipsen (10-20200324-1cross1) ... Setting up binutils-mipsel-linux-gnu (2.34-5cross6) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libgomp1-mipsel-cross (10-20200324-1cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.90) ... Setting up cpp-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up linux-libc-dev-mipsel-cross (5.4.19-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.15-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-4) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:mipsel (9.3.0-9) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libstdc++-9-dev:amd64 (9.3.0-9) ... Setting up libc6-dev-mipsel-cross (2.30-2cross1) ... Setting up libtool (2.4.6-14) ... Setting up libgcc-s1-mipsel-cross (10-20200324-1cross1) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-mipsel-cross (10-20200324-1cross1) ... Setting up help2man (1.47.13) ... Setting up libgcc-9-dev-mipsel-cross (9.3.0-8cross1) ... Setting up cpp-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-9) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gcc-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up gettext (0.19.8.1-10) ... Setting up libstdc++6-mipsel-cross (10-20200324-1cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-9-dev-mipsel-cross (9.3.0-8cross1) ... Setting up po-debconf (1.0.21) ... Setting up g++-9-mipsel-linux-gnu (9.3.0-8cross1) ... Setting up g++-mipsel-linux-gnu (4:9.2.1-4.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-mipsel (12.8) ... Setting up libcrypt1:mipsel (1:4.4.15-1) ... Setting up libgcc-s1:mipsel (10-20200402-1) ... Setting up libc6:mipsel (2.30-4) ... Setting up libcrypt-dev:mipsel (1:4.4.15-1) ... Setting up libc6-dev:mipsel (2.30-4) ... Setting up libstdc++6:mipsel (10-20200402-1) ... Setting up zlib1g:mipsel (1:1.2.11.dfsg-2) ... Setting up libgomp1:mipsel (10-20200402-1) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:mipsel (10-20200402-1) ... Setting up zlib1g-dev:mipsel (1:1.2.11.dfsg-2) ... Setting up debhelper (12.10) ... Setting up libgcc-9-dev:mipsel (9.3.0-9) ... Setting up libstdc++-9-dev:mipsel (9.3.0-9) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.30-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-5 dpkg-dev_1.19.7 g++-9_9.3.0-9 gcc-9_9.3.0-9 libc6-dev_2.30-4 libstdc++-9-dev_9.3.0-9 libstdc++-9-dev-mipsel-cross_9.3.0-8cross1 libstdc++6_10-20200402-1 libstdc++6-mipsel-cross_10-20200324-1cross1 linux-libc-dev_5.5.13-2 Package versions: adduser_3.118 apt_2.0.1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5 binutils-common_2.34-5 binutils-mipsel-linux-gnu_2.34-5cross6 binutils-x86-64-linux-gnu_2.34-5 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-3 cpp-9_9.3.0-9 cpp-9-mipsel-linux-gnu_9.3.0-8cross1 cpp-mipsel-linux-gnu_4:9.2.1-4.1 cross-config_2.6.15-3 crossbuild-essential-mipsel_12.8 d-shlibs_0.90 dash_0.5.10.2-7 debconf_1.5.73 debhelper_12.10 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-9 g++-9-mipsel-linux-gnu_9.3.0-8cross1 g++-mipsel-linux-gnu_4:9.2.1-4.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200402-1 gcc-10-cross-base-mipsen_10-20200324-1cross1 gcc-8-base_8.4.0-3 gcc-9_9.3.0-9 gcc-9-base_9.3.0-9 gcc-9-cross-base-mipsen_9.3.0-8cross1 gcc-9-mipsel-linux-gnu_9.3.0-8cross1 gcc-9-mipsel-linux-gnu-base_9.3.0-8cross1 gcc-mipsel-linux-gnu_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 help2man_1.47.13 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.0.1 libarchive-zip-perl_1.68-1 libasan5_9.3.0-9 libatomic1_10-20200402-1 libatomic1-mipsel-cross_10-20200324-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-5 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4 libc-dev-bin_2.30-4 libc6_2.30-4 libc6-dev_2.30-4 libc6-dev-mipsel-cross_2.30-2cross1 libc6-mipsel-cross_2.30-2cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200402-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-5 libctf0_2.34-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-9 libgcc-9-dev-mipsel-cross_9.3.0-8cross1 libgcc-s1_10-20200402-1 libgcc-s1-mipsel-cross_10-20200324-1cross1 libgcc1_1:10-20200402-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10-20200402-1 libgomp1-mipsel-cross_10-20200324-1cross1 libgpg-error0_1.37-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200402-1 liblocale-gettext-perl_1.07-4 liblsan0_10-20200402-1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-3 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libquadmath0_10-20200402-1 libseccomp2_2.4.3-1 libselinux1_3.0-1+b2 libsemanage-common_3.0-1 libsemanage1_3.0-1+b2 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-9 libstdc++-9-dev-mipsel-cross_9.3.0-8cross1 libstdc++6_10-20200402-1 libstdc++6-mipsel-cross_10-20200324-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200402-1 libubsan1_10-20200402-1 libuchardet0_0.0.6-3 libudev1_245.4-1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.5.13-2 linux-libc-dev-mipsel-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fermi-lite Binary: fml-asm, libfml0, libfml-dev Architecture: any Version: 0.1-12 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://github.com/lh3/fermi-lite Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/fermi-lite Vcs-Git: https://salsa.debian.org/med-team/fermi-lite.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 12), d-shlibs, zlib1g-dev, help2man Package-List: fml-asm deb science optional arch=any libfml-dev deb libdevel optional arch=any libfml0 deb libs optional arch=any Checksums-Sha1: c4bc7936c2e387c8c9d5832091a5560faa66d273 247611 fermi-lite_0.1.orig.tar.gz 7f39c4ab9e2f2cb214f5c8d7e6a82574c78c0e4c 45500 fermi-lite_0.1-12.debian.tar.xz Checksums-Sha256: 661053bc7213b575912fc7be9cdfebc1c92a10319594a8e8f18542c9e2adda6e 247611 fermi-lite_0.1.orig.tar.gz 8bc87427ee2a3bea3bb6e91465aafee368f9d21b0ea28983ef79311009fc16e2 45500 fermi-lite_0.1-12.debian.tar.xz Files: a4c78ce48472795877f14eec8202447c 247611 fermi-lite_0.1.orig.tar.gz 2e7ed77d0729e14f0b0198fe52c16ccf 45500 fermi-lite_0.1-12.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl6BtCIACgkQPCZ2P2xn 5uJrvg//ezY1eDWJyO8Lws7esNPCG7+Pp6M7sOpNK4M/6JcmTNBk6rk1g5fr82ZK 83FUu2HMN4lNlIyWV+tMDI/QejafX1gnQlJNA1sdna5Nmb8dcq/27CsbqzXDhWhe yTM8mggy0w5iA94GKw9TvpJrlXiz0b/H8TL9xZtfqSsfPpVjLaqiSzAizRCq2ILU rTD0sN4I2QPkid/tl8mKDbGM0ZALNURL+0M7cNldNDzK4qYJRWxAxSEn3hwFr6xf tFDUhI09Tz+ZaxaIfnaQMlvnbIPs2WvrmTlW8gtF6XBHmBl2bNt8ARmB89XIVskD +/Np6JOfQaSpn+5SOSs9rzqpXgee+7gxAyWcaN1Ve1r6bgQ07mQ86soYp+K1NwuK w8eWnzY+f+LZc24L5KML2fd8OFBOE0vTP8FK5Q4SOvQ1wfjJWYqU9kzNHCh0Le7J PXBj5uhoTCLQuSm8rEqCISrXaOccNKJXHUq8/A5/HbFe10aeZP+vN67+MZZDyOHZ HcRxCosueJaTF66LpG4Rvy0LbAO0v+/nyBEgGQBP3lAxamqJe9C4oQqJLtVrcl49 RT2Aj/gp32HwI2ghTMMyLEC1D5uqd9NUCPN+h46b5/5P8qpp+5rXukt7NsHG8yD7 DnRykchhJySaw6esa+3gg3oOFBScEy5xO2ziK/xvUuaxSJ9NA/E= =7oAi -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Mar 30 08:56:02 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fermi-lite_0.1-12.dsc dpkg-source: info: extracting fermi-lite in /<> dpkg-source: info: unpacking fermi-lite_0.1.orig.tar.gz dpkg-source: info: unpacking fermi-lite_0.1-12.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying make_shared_lib dpkg-source: info: applying hardening dpkg-source: info: applying rename_bseq1_t.patch dpkg-source: info: applying bcf_seqlib.patch dpkg-source: info: applying simde dpkg-source: info: applying ensure-signed-comparison.patch dpkg-source: info: applying sync_instead_of_atomic Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-965622d2-2388-4600-a7f9-c3ca3594b566 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package fermi-lite dpkg-buildpackage: info: source version 0.1-12 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -fr gmon.out *.o ext/*.o a.out fml-asm *~ *.a *.dSYM session* make[2]: Leaving directory '/<>' rm -f fml-asm.1 make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mipsel-linux-gnu-pkg-config CXX=mipsel-linux-gnu-g\+\+ CC=mipsel-linux-gnu-gcc make[1]: Entering directory '/<>' mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kthread.o kthread.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc.o misc.c misc.c: In function ‘fml_utg_print’: misc.c:211:12: warning: variable ‘l’ set but not used [-Wunused-but-set-variable] 211 | int i, j, l; | ^ mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bseq.o bseq.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o htab.o htab.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bfc.o bfc.c bfc.c: In function ‘bfc_kmer_insert’: bfc.c:54:17: warning: variable ‘hash’ set but not used [-Wunused-but-set-variable] 54 | uint64_t y[2], hash; | ^~~~ mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rle.o rle.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rope.o rope.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrope.o mrope.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rld0.o rld0.c rld0.c: In function ‘rld_restore’: rld0.c:298:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 298 | fread(e->z[i], 8, RLD_LSIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rld0.c:299:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 299 | fread(e->z[i], 8, k, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~ rld0.c:301:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 301 | fread(e->frame, 8 * e->asize1, e->n_frames, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rld0.c: In function ‘rld_restore_header’: rld0.c:256:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 256 | fread(magic, 1, 4, fp); | ^~~~~~~~~~~~~~~~~~~~~~ rld0.c:258:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 258 | fread(&x, 4, 1, fp); | ^~~~~~~~~~~~~~~~~~~ rld0.c:260:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 260 | fread(a, 8, 3, fp); | ^~~~~~~~~~~~~~~~~~ rld0.c:262:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 262 | fread(e->mcnt + 1, 8, e->asize, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o unitig.o unitig.c unitig.c: In function ‘unitig1’: unitig.c:325:16: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 325 | int seed_len, ret, is_loop, contained; | ^~~ mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mag.o mag.c mag.c: In function ‘mag_g_rm_vext’: mag.c:418:38: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 418 | fprintf(stderr, "[M::%s] removed %ld tips (min_len=%d, min_nsr=%d)\n", __func__, a.n, min_len, min_nsr); | ~~^ ~~~ | | | | long int size_t {aka unsigned int} | %d mag.c: In function ‘mag_g_rm_vint’: mag.c:436:38: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 436 | fprintf(stderr, "[M::%s] removed %ld internal vertices (min_len=%d, min_nsr=%d)\n", __func__, a.n, min_len, min_nsr); | ~~^ ~~~ | | | | long int size_t {aka unsigned int} | %d mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bubble.o bubble.c mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ksw.o ksw.c ar -csru libfml.a kthread.o misc.o bseq.o htab.o bfc.o rle.o rope.o mrope.o rld0.o unitig.o mag.o bubble.o ksw.o ar: `u' modifier ignored since `D' is the default (see `U') mipsel-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -c -o example.o example.c mipsel-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -g -Wall -O2 -fPIC libfml.a example.o -o fml-asm -L. -lfml -latomic -lm -lz -lpthread mipsel-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -shared -o libfml.so.0 kthread.o misc.o bseq.o htab.o bfc.o rle.o rope.o mrope.o rld0.o unitig.o mag.o bubble.o ksw.o -fPIC -Wl,-soname,libfml.so.0 -latomic -lm -lz -lpthread make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' ln -s libfml.so.* libfml.so d-shlibmove --commit \ --multiarch \ --devunversioned \ --movedev "fml.h" /usr/include/ \ --movedev "bfc.h" /usr/include/fml \ --movedev "htab.h" /usr/include/fml \ --movedev "kmer.h" /usr/include/fml \ --movedev "internal.h" /usr/include/fml \ --movedev "khash.h" /usr/include/fml \ --movedev "kvec.h" /usr/include/fml \ --movedev "ksort.h" /usr/include/fml \ libfml.so Library package automatic movement utility --> zlib1g-dev package exists. set -e install -d -m 755 debian/libfml-dev/usr/lib/mipsel-linux-gnu install -d -m 755 debian/libfml0/usr/lib/mipsel-linux-gnu mv ./libfml.a debian/libfml-dev/usr/lib/mipsel-linux-gnu mv ./libfml.la debian/libfml-dev/usr/lib/mipsel-linux-gnu || true mv ./libfml.so debian/libfml-dev/usr/lib/mipsel-linux-gnu mv /<>/libfml.so.0 debian/libfml0/usr/lib/mipsel-linux-gnu PKGDEV=libfml-dev PKGSHL=libfml0 install -d -m 755 debian/libfml-dev//usr/include/ mv fml.h debian/libfml-dev//usr/include/ install -d -m 755 debian/libfml-dev//usr/include/fml mv bfc.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv htab.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv kmer.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv internal.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv khash.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv kvec.h debian/libfml-dev//usr/include/fml install -d -m 755 debian/libfml-dev//usr/include/fml mv ksort.h debian/libfml-dev//usr/include/fml mv: cannot stat './libfml.la': No such file or directory make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory '/<>' help2man --version-string='0.1' \ -n 'assemble Illumina short reads in small regions' \ -N --no-discard-stderr -h '' ./fml-asm > fml-asm.1 dh_installman make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'fml-asm' in '../fml-asm_0.1-12_mipsel.deb'. dpkg-deb: building package 'fml-asm-dbgsym' in '../fml-asm-dbgsym_0.1-12_mipsel.deb'. dpkg-deb: building package 'libfml0' in '../libfml0_0.1-12_mipsel.deb'. dpkg-deb: building package 'libfml0-dbgsym' in '../libfml0-dbgsym_0.1-12_mipsel.deb'. dpkg-deb: building package 'libfml-dev' in '../libfml-dev_0.1-12_mipsel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../fermi-lite_0.1-12_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-04-04T09:14:33Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fermi-lite_0.1-12_mipsel.changes: --------------------------------- Format: 1.8 Date: Mon, 30 Mar 2020 10:55:37 +0200 Source: fermi-lite Binary: fml-asm fml-asm-dbgsym libfml-dev libfml0 libfml0-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 0.1-12 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: fml-asm - tool for assembling Illumina short reads in small regions libfml-dev - development headers for libfml libfml0 - library for assembling Illumina short reads in small regions Changes: fermi-lite (0.1-12) unstable; urgency=medium . * Team upload. * debian/patches/sync_instead_of_atomic: fix logic and re-enable (fetch the previous value, not the new one). Fixes build on mipsel. * Added a basic package time test & autopkgtest to confirm the patch using fml-asm Checksums-Sha1: 44c2545760cf8811fed5142113e79da9c5268a4a 5964 fermi-lite_0.1-12_mipsel.buildinfo 82280291c43d30acb13676f138e909525e5f28ff 175384 fml-asm-dbgsym_0.1-12_mipsel.deb e579a74093bb05b5b64cae2aae056962a92cc54b 83508 fml-asm_0.1-12_mipsel.deb be9c1fe0a57470a11d509227d8a1bec82823519e 99508 libfml-dev_0.1-12_mipsel.deb 74339be3ddcacd6142b1f9781ae0d517ee15ae42 173324 libfml0-dbgsym_0.1-12_mipsel.deb a3659b000d006783a397947b259fb0a0cb383fa2 83148 libfml0_0.1-12_mipsel.deb Checksums-Sha256: a62fc6f96c5e336962d415f0c20870c60fb5e8f8f8064d1de6bde3b227502c8c 5964 fermi-lite_0.1-12_mipsel.buildinfo e717ab84b9394cb9f4c7a9f6468c0f69c8a7ee6718544f97b15c9668e11d0121 175384 fml-asm-dbgsym_0.1-12_mipsel.deb 7adb664e792edfb5489733fc3e96bc9a9a03ff023a595c9395d1ab71b1d709a0 83508 fml-asm_0.1-12_mipsel.deb 84d2667f48afc7e7297ca82e0c6fc5c7fab9e7e6ef4025f72261440e0b2cd491 99508 libfml-dev_0.1-12_mipsel.deb 1bcfd8d648cc96f25d1c01ddbf409a254758accd5c95e61556c66583251dd572 173324 libfml0-dbgsym_0.1-12_mipsel.deb 97a85594f52562ac78a28cfb3b4dd3ad15d18716fba515801dd583152546f090 83148 libfml0_0.1-12_mipsel.deb Files: 8078774d62dff4c535ea3ee642315923 5964 science optional fermi-lite_0.1-12_mipsel.buildinfo 29c047242be678a3ad655d2016cdd369 175384 debug optional fml-asm-dbgsym_0.1-12_mipsel.deb 8dda11d8388ce96c5bccefe804aecd15 83508 science optional fml-asm_0.1-12_mipsel.deb 2a4b0e96fd8dfdbe657bcb0f10093b78 99508 libdevel optional libfml-dev_0.1-12_mipsel.deb b87db6ddc20d4d0d7f48e4a8a015231a 173324 debug optional libfml0-dbgsym_0.1-12_mipsel.deb 27f30ca62c99fc2044e633f3d833a55b 83148 libs optional libfml0_0.1-12_mipsel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: fermi-lite Binary: fml-asm libfml0 libfml-dev Architecture: mipsel Version: 0.1-12 Checksums-Md5: 29c047242be678a3ad655d2016cdd369 175384 fml-asm-dbgsym_0.1-12_mipsel.deb 8dda11d8388ce96c5bccefe804aecd15 83508 fml-asm_0.1-12_mipsel.deb 2a4b0e96fd8dfdbe657bcb0f10093b78 99508 libfml-dev_0.1-12_mipsel.deb b87db6ddc20d4d0d7f48e4a8a015231a 173324 libfml0-dbgsym_0.1-12_mipsel.deb 27f30ca62c99fc2044e633f3d833a55b 83148 libfml0_0.1-12_mipsel.deb Checksums-Sha1: 82280291c43d30acb13676f138e909525e5f28ff 175384 fml-asm-dbgsym_0.1-12_mipsel.deb e579a74093bb05b5b64cae2aae056962a92cc54b 83508 fml-asm_0.1-12_mipsel.deb be9c1fe0a57470a11d509227d8a1bec82823519e 99508 libfml-dev_0.1-12_mipsel.deb 74339be3ddcacd6142b1f9781ae0d517ee15ae42 173324 libfml0-dbgsym_0.1-12_mipsel.deb a3659b000d006783a397947b259fb0a0cb383fa2 83148 libfml0_0.1-12_mipsel.deb Checksums-Sha256: e717ab84b9394cb9f4c7a9f6468c0f69c8a7ee6718544f97b15c9668e11d0121 175384 fml-asm-dbgsym_0.1-12_mipsel.deb 7adb664e792edfb5489733fc3e96bc9a9a03ff023a595c9395d1ab71b1d709a0 83508 fml-asm_0.1-12_mipsel.deb 84d2667f48afc7e7297ca82e0c6fc5c7fab9e7e6ef4025f72261440e0b2cd491 99508 libfml-dev_0.1-12_mipsel.deb 1bcfd8d648cc96f25d1c01ddbf409a254758accd5c95e61556c66583251dd572 173324 libfml0-dbgsym_0.1-12_mipsel.deb 97a85594f52562ac78a28cfb3b4dd3ad15d18716fba515801dd583152546f090 83148 libfml0_0.1-12_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 04 Apr 2020 09:14:32 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.0.1), autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-5), binutils-common (= 2.34-5), binutils-x86-64-linux-gnu (= 2.34-5), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-9), d-shlibs (= 0.90), dash (= 0.5.10.2-7), debconf (= 1.5.73), debhelper (= 12.10), debian-archive-keyring (= 2019.1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-9), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200402-1), gcc-9 (= 9.3.0-9), gcc-9-base (= 9.3.0-9), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-2), help2man (= 1.47.13), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libapt-pkg6.0 (= 2.0.1), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-9), libatomic1 (= 10-20200402-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3), libbinutils (= 2.34-5), libblkid1 (= 2.34-0.1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-4), libc-dev-bin (= 2.30-4), libc6 (= 2.30-4), libc6-dev (= 2.30-4), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10-20200402-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.15-1), libcrypt1 (= 1:4.4.15-1), libctf-nobfd0 (= 2.34-5), libctf0 (= 2.34-5), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.10), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-9-dev (= 9.3.0-9), libgcc-s1 (= 10-20200402-1), libgcc1 (= 1:10-20200402-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.13-2), libgomp1 (= 10-20200402-1), libgpg-error0 (= 1.37-1), libhogweed5 (= 3.5.1+really3.5.1-2), libicu63 (= 63.2-3), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10-20200402-1), liblocale-gettext-perl (= 1.07-4), liblsan0 (= 10-20200402-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10-20200402-1), libseccomp2 (= 2.4.3-1), libselinux1 (= 3.0-1+b2), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b2), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libstdc++-9-dev (= 9.3.0-9), libstdc++6 (= 10-20200402-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.4-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200402-1), libubsan1 (= 10-20200402-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.4-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.10+dfsg-4), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.5.13-2), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1585558537" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fml-asm-dbgsym_0.1-12_mipsel.deb -------------------------------- new Debian package, version 2.0. size 175384 bytes: control archive=540 bytes. 372 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: fml-asm-dbgsym Source: fermi-lite Version: 0.1-12 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 195 Depends: fml-asm (= 0.1-12) Section: debug Priority: optional Description: debug symbols for fml-asm Build-Ids: 5204e05ec6ae4eca81b0251570ce5cae95d2c091 drwxr-xr-x root/root 0 2020-03-30 08:55 ./ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/.build-id/52/ -rw-r--r-- root/root 188520 2020-03-30 08:55 ./usr/lib/debug/.build-id/52/04e05ec6ae4eca81b0251570ce5cae95d2c091.debug drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-03-30 08:55 ./usr/share/doc/fml-asm-dbgsym -> fml-asm fml-asm_0.1-12_mipsel.deb ------------------------- new Debian package, version 2.0. size 83508 bytes: control archive=964 bytes. 898 bytes, 18 lines control 326 bytes, 5 lines md5sums Package: fml-asm Source: fermi-lite Version: 0.1-12 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 202 Depends: libatomic1 (>= 4.8), libc6 (>= 2.7), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/lh3/fermi-lite Description: tool for assembling Illumina short reads in small regions Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling. drwxr-xr-x root/root 0 2020-03-30 08:55 ./ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/bin/ -rwxr-xr-x root/root 189888 2020-03-30 08:55 ./usr/bin/fml-asm drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/fml-asm/ -rw-r--r-- root/root 70 2019-12-13 16:36 ./usr/share/doc/fml-asm/TODO.Debian -rw-r--r-- root/root 1231 2020-03-30 08:55 ./usr/share/doc/fml-asm/changelog.Debian.gz -rw-r--r-- root/root 2710 2020-02-15 12:14 ./usr/share/doc/fml-asm/copyright drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/man/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/man/man1/ -rw-r--r-- root/root 228 2020-03-30 08:55 ./usr/share/man/man1/fml-asm.1.gz libfml-dev_0.1-12_mipsel.deb ---------------------------- new Debian package, version 2.0. size 99508 bytes: control archive=988 bytes. 603 bytes, 17 lines control 672 bytes, 11 lines md5sums Package: libfml-dev Source: fermi-lite Version: 0.1-12 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 287 Depends: libfml0 (= 0.1-12), zlib1g-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/lh3/fermi-lite Description: development headers for libfml Fermi-lite is a standalone C library tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size. . This package contains the C library headers for using libfml in custom tools, along with a static library. drwxr-xr-x root/root 0 2020-03-30 08:55 ./ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/include/ -rw-r--r-- root/root 4470 2020-03-30 08:55 ./usr/include/fml.h drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/include/fml/ -rw-r--r-- root/root 3078 2020-03-30 08:55 ./usr/include/fml/bfc.h -rw-r--r-- root/root 622 2016-07-20 03:28 ./usr/include/fml/htab.h -rw-r--r-- root/root 447 2020-03-30 08:55 ./usr/include/fml/internal.h -rw-r--r-- root/root 21102 2016-07-20 03:28 ./usr/include/fml/khash.h -rw-r--r-- root/root 2880 2016-07-20 03:28 ./usr/include/fml/kmer.h -rw-r--r-- root/root 10635 2016-07-20 03:28 ./usr/include/fml/ksort.h -rw-r--r-- root/root 3289 2016-07-20 03:28 ./usr/include/fml/kvec.h drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/mipsel-linux-gnu/ -rw-r--r-- root/root 225736 2020-03-30 08:55 ./usr/lib/mipsel-linux-gnu/libfml.a lrwxrwxrwx root/root 0 2020-03-30 08:55 ./usr/lib/mipsel-linux-gnu/libfml.so -> libfml.so.0 drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/libfml-dev/ -rw-r--r-- root/root 1231 2020-03-30 08:55 ./usr/share/doc/libfml-dev/changelog.Debian.gz -rw-r--r-- root/root 2710 2020-02-15 12:14 ./usr/share/doc/libfml-dev/copyright libfml0-dbgsym_0.1-12_mipsel.deb -------------------------------- new Debian package, version 2.0. size 173324 bytes: control archive=552 bytes. 389 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libfml0-dbgsym Source: fermi-lite Version: 0.1-12 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 192 Depends: libfml0 (= 0.1-12) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libfml0 Build-Ids: 19701065356112f2e36320d65e887caacb242d4c drwxr-xr-x root/root 0 2020-03-30 08:55 ./ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/debug/.build-id/19/ -rw-r--r-- root/root 185644 2020-03-30 08:55 ./usr/lib/debug/.build-id/19/701065356112f2e36320d65e887caacb242d4c.debug drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-03-30 08:55 ./usr/share/doc/libfml0-dbgsym -> libfml0 libfml0_0.1-12_mipsel.deb ------------------------- new Debian package, version 2.0. size 83148 bytes: control archive=1820 bytes. 634 bytes, 17 lines control 213 bytes, 3 lines md5sums 26 bytes, 1 lines shlibs 4754 bytes, 193 lines symbols 66 bytes, 2 lines triggers Package: libfml0 Source: fermi-lite Version: 0.1-12 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 206 Depends: libatomic1 (>= 4.8), libc6 (>= 2.7), zlib1g (>= 1:1.1.4) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/lh3/fermi-lite Description: library for assembling Illumina short reads in small regions Fermi-lite is a standalone C library tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size. . This package contains a shared library offering the fermi-lite API to custom C programs. drwxr-xr-x root/root 0 2020-03-30 08:55 ./ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/lib/mipsel-linux-gnu/ -rw-r--r-- root/root 189540 2020-03-30 08:55 ./usr/lib/mipsel-linux-gnu/libfml.so.0 drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-30 08:55 ./usr/share/doc/libfml0/ -rw-r--r-- root/root 1231 2020-03-30 08:55 ./usr/share/doc/libfml0/changelog.Debian.gz -rw-r--r-- root/root 2710 2020-02-15 12:14 ./usr/share/doc/libfml0/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [553 B] Get:5 copy:/<>/apt_archive ./ Packages [641 B] Fetched 2157 B in 0s (88.5 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mipsel t1utils 0 upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 9361 kB of archives. After this operation, 26.7 MB of additional disk space will be used. 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amd64 0.14-1+b2 [12.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010001-1 [338 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.62.0 [1292 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9361 kB in 0s (48.3 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20218 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3200-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.011+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010001-1) ... Setting up libnet-dns-perl (1.23-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.62.0) ... Setting up sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-4) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 4260 Build-Time: 17 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 16 Job: fermi-lite_0.1-12 Lintian: pass Machine Architecture: amd64 Package: fermi-lite Package-Time: 43 Source-Version: 0.1-12 Space: 4260 Status: successful Version: 0.1-12 -------------------------------------------------------------------------------- Finished at 2020-04-04T09:14:33Z Build needed 00:00:43, 4260k disk space