sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | freebayes 1.3.5-3 (armel) Thu, 14 Oct 2021 10:36:22 +0000 | +==============================================================================+ Package: freebayes Version: 1.3.5-3 Source Version: 1.3.5-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e9c281e7-5583-4041-bfa4-7289d9bb7226' with '<>' I: NOTICE: Log filtering will replace 'build/freebayes-21wJ05/resolver-8QreDi' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-10-14-0801.34-F-2021-10-14-0801.34.pdiff [10.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-10-14-0801.34-F-2021-10-14-0801.34.pdiff [6479 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-10-14-0801.34-F-2021-10-14-0801.34.pdiff [10.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-10-14-0801.34-F-2021-10-14-0801.34.pdiff [6479 B] Get:6 http://debian.oregonstate.edu/debian unstable/main armel Packages [8427 kB] Fetched 8736 kB in 3s (3343 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'freebayes' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/freebayes.git Please use: git clone https://salsa.debian.org/med-team/freebayes.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2904 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main freebayes 1.3.5-3 (dsc) [2221 B] Get:2 http://debian.oregonstate.edu/debian unstable/main freebayes 1.3.5-3 (tar) [2890 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main freebayes 1.3.5-3 (diff) [11.4 kB] Fetched 2904 kB in 0s (87.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/freebayes-21wJ05/freebayes-1.3.5' with '<>' I: NOTICE: Log filtering will replace 'build/freebayes-21wJ05' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.0~rc2+dfsg-3~), libtabixpp-dev, libseqlib-dev (>= 1.1.2+dfsg-5), bc, samtools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.0~rc2+dfsg-3~), libtabixpp-dev, libseqlib-dev (>= 1.1.2+dfsg-5), bc, samtools, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [506 B] Get:5 copy:/<>/apt_archive ./ Packages [578 B] Fetched 2041 B in 0s (80.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bc binutils-arm-linux-gnueabi bsdextrautils build-essential cpp-11-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-arm-linux-gnueabi gcc-11-arm-linux-gnueabi-base gcc-11-base:armel gcc-11-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbamtools-dev:armel libbamtools2.5.1:armel libbrotli1:armel libbwa-dev:armel libbz2-1.0:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armel libdeflate0:armel libdisorder-dev:armel libdisorder0:armel libdpkg-perl libelf1 libexpat1 libfastahack-dev:armel libfastahack0:armel libffi8:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armel libfml0:armel libgcc-11-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libhogweed6:armel libhts-dev:armel libhts3:armel libhtscodecs2:armel libicu67 libidn2-0:armel libio-string-perl libjsoncpp-dev:armel libjsoncpp24:armel libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2:armel liblocale-gettext-perl liblzma-dev:armel liblzma5:armel libmagic-mgc libmagic1 libmpdec3 libncurses6:armel libnettle8:armel libnghttp2-14:armel libnsl-dev libnsl-dev:armel libnsl2:armel libp11-kit0:armel libperl5.32 libpipeline1 libpsl5:armel libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librtmp1:armel libsasl2-2:armel libsasl2-modules-db:armel libseqlib-dev:armel libseqlib2:armel libsigsegv2 libsmithwaterman-dev:armel libsmithwaterman0:armel libsqlite3-0 libssh2-1:armel libssl1.1:armel libssw-dev:armel libssw0:armel libstdc++-11-dev libstdc++-11-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtabixpp-dev:armel libtabixpp0:armel libtasn1-6:armel libtinfo6:armel libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libvcflib-dev:armel libvcflib1:armel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db media-types meson ninja-build perl perl-modules-5.32 pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3.9 python3.9-minimal rpcsvc-proto samtools:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff libbamtools-doc:armel glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel glibc-doc manpages-dev:armel libcurl4-doc:armel libgnutls28-dev:armel libidn11-dev:armel libkrb5-dev:armel libldap2-dev:armel librtmp-dev:armel libssh2-1-dev:armel gnupg git bzr gnutls-bin:armel krb5-doc:armel krb5-user:armel liblzma-doc:armel libstdc++-11-doc libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl python3-doc python3-tk python3-venv python3-setuptools python3.9-venv python3.9-doc binfmt-support cwltool:armel Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:armel libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales:armel libldap-common:armel libgpm2:armel publicsuffix:armel ca-certificates libsasl2-modules:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc binutils-arm-linux-gnueabi bsdextrautils build-essential cpp-11-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-11 g++-11-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-arm-linux-gnueabi gcc-11-arm-linux-gnueabi-base gcc-11-base:armel gcc-11-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbamtools-dev:armel libbamtools2.5.1:armel libbrotli1:armel libbwa-dev:armel libbz2-1.0:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armel libdeflate0:armel libdisorder-dev:armel libdisorder0:armel libdpkg-perl libelf1 libexpat1 libfastahack-dev:armel libfastahack0:armel libffi8:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:armel libfml0:armel libgcc-11-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libhogweed6:armel libhts-dev:armel libhts3:armel libhtscodecs2:armel libicu67 libidn2-0:armel libio-string-perl libjsoncpp-dev:armel libjsoncpp24:armel libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2:armel liblocale-gettext-perl liblzma-dev:armel liblzma5:armel libmagic-mgc libmagic1 libmpdec3 libncurses6:armel libnettle8:armel libnghttp2-14:armel libnsl-dev libnsl-dev:armel libnsl2:armel libp11-kit0:armel libperl5.32 libpipeline1 libpsl5:armel libpython3-stdlib libpython3.9-minimal libpython3.9-stdlib librtmp1:armel libsasl2-2:armel libsasl2-modules-db:armel libseqlib-dev:armel libseqlib2:armel libsigsegv2 libsmithwaterman-dev:armel libsmithwaterman0:armel libsqlite3-0 libssh2-1:armel libssl1.1:armel libssw-dev:armel libssw0:armel libstdc++-11-dev libstdc++-11-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtabixpp-dev:armel libtabixpp0:armel libtasn1-6:armel libtinfo6:armel libtirpc-dev libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libvcflib-dev:armel libvcflib1:armel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db media-types meson ninja-build perl perl-modules-5.32 pkg-config po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3.9 python3.9-minimal rpcsvc-proto samtools:armel sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel 0 upgraded, 182 newly installed, 0 to remove and 0 not upgraded. Need to get 290 MB of archives. After this operation, 1018 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-3 [143 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-minimal amd64 3.9.7-4 [804 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.1-2+b1 [104 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9-minimal amd64 3.9.7-4 [1963 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 media-types all 4.0.0 [30.3 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3.9-stdlib amd64 3.9.7-4 [1688 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 python3.9 amd64 3.9.7-4 [480 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main armel gcc-11-base armel 11.2.0-9 [205 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.4.0-3 [200 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.4-2 [819 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 bc amd64 1.07.1-3+b1 [110 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.37-7 [2865 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.25-2 [104 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-4 [2251 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-9 [1949 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-9 [49.7 MB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabi-base amd64 11.2.0-9cross1 [206 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-arm-linux-gnueabi amd64 11.2.0-9cross1 [48.3 MB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:11.2.0-2 [17.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-9cross1 [201 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.32-1cross4 [1121 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armel-cross all 11.2.0-9cross1 [38.5 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 11.2.0-9cross1 [88.5 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 11.2.0-9cross1 [8812 B] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armel-cross all 11.2.0-9cross1 [1937 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 11.2.0-9cross1 [426 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 11.2.0-9cross1 [798 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-armel-cross all 11.2.0-9cross1 [703 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-arm-linux-gnueabi amd64 11.2.0-9cross1 [54.8 MB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:11.2.0-2 [1460 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.10.46-4cross4 [1436 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.32-1cross4 [1801 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-armel-cross all 11.2.0-9cross1 [1954 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-arm-linux-gnueabi amd64 11.2.0-9cross1 [52.4 MB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:11.2.0-2 [1176 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5 [696 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.9 [6704 B] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.2 [1056 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main armel libgcc-s1 armel 11.2.0-9 [38.4 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.32-4 [2349 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.4.0-3 [2703 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 11.2.0-9 [9016 B] Get:102 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 11.2.0-9 [466 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-2 [84.7 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main armel libbamtools2.5.1 armel 2.5.1+dfsg-9 [134 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main armel libbamtools-dev armel 2.5.1+dfsg-9 [190 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main armel libbrotli1 armel 1.0.9-2+b2 [265 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main armel libbwa-dev armel 0.7.17-6+b1 [137 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main armel libbz2-1.0 armel 1.0.8-4 [45.5 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.14.9-2 [1392 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel libcrypt1 armel 1:4.4.25-2 [98.8 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel libcrypt-dev armel 1:4.4.25-2 [115 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armel libcom-err2 armel 1.46.4-1 [74.5 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel libkrb5support0 armel 1.18.3-7 [62.4 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armel libk5crypto3 armel 1.18.3-7 [108 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armel libkeyutils1 armel 1.6.1-2 [14.5 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main armel libssl1.1 armel 1.1.1l-1 [1279 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armel libkrb5-3 armel 1.18.3-7 [315 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armel libgssapi-krb5-2 armel 1.18.3-7 [142 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main armel libtirpc3 armel 1.3.2-2 [71.6 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armel libtirpc-dev armel 1.3.2-2 [182 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.32-4 [1849 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armel libgmp10 armel 2:6.2.1+dfsg-2 [506 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armel libnettle8 armel 3.7.3-1 [281 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armel libhogweed6 armel 3.7.3-1 [307 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armel libunistring2 armel 0.9.10-6 [360 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armel libidn2-0 armel 2.3.2-2 [92.2 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armel libffi8 armel 3.4.2-3 [21.1 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armel libp11-kit0 armel 0.24.0-5 [327 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armel libtasn1-6 armel 4.17.0-2 [50.3 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armel libgnutls30 armel 3.7.2-2 [1275 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armel libdb5.3 armel 5.3.28+dfsg1-0.8 [572 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-modules-db armel 2.1.27+dfsg-2.1 [67.7 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-2 armel 2.1.27+dfsg-2.1 [98.4 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armel libldap-2.4-2 armel 2.4.59+dfsg-1 [209 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armel libnghttp2-14 armel 1.43.0-1 [65.5 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armel libpsl5 armel 0.21.0-1.2 [56.2 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armel librtmp1 armel 2.4+20151223.gitfa8646d.1-2+b2 [55.1 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armel libssh2-1 armel 1.10.0-2 [162 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armel libcurl3-gnutls armel 7.74.0-1.3+b1 [301 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armel libcurl4-gnutls-dev armel 7.74.0-1.3+b1 [398 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armel libdeflate0 armel 1.8-1 [42.6 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armel libdeflate-dev armel 1.8-1 [41.0 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armel libdisorder0 armel 0.0.2+git20130809.8062ee1-3 [6164 B] Get:146 http://debian.oregonstate.edu/debian unstable/main armel libdisorder-dev armel 0.0.2+git20130809.8062ee1-3 [4460 B] Get:147 http://debian.oregonstate.edu/debian unstable/main armel libfastahack0 armel 1.0.0+dfsg-8 [23.9 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armel libfastahack-dev armel 1.0.0+dfsg-8 [28.1 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armel libfml0 armel 0.1+git20190320.b499514-1+b1 [70.0 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-2 [185 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main armel libfml-dev armel 0.1+git20190320.b499514-1+b1 [80.7 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 11.2.0-9 [90.6 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 11.2.0-9 [799 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.4.0-3 [641 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.70.0-1+b1 [1402 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armel libhtscodecs2 armel 1.1.1-3+b1 [51.3 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armel liblzma5 armel 5.2.5-2 [159 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armel libhts3 armel 1.13+ds-2 [343 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armel liblzma-dev armel 5.2.5-2 [220 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main armel libhts-dev armel 1.13+ds-2 [4051 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main armel libjsoncpp24 armel 1.9.4-5 [67.3 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main armel libjsoncpp-dev armel 1.9.4-5 [25.7 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main armel libtinfo6 armel 6.2+20210905-1 [334 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main armel libncurses6 armel 6.2+20210905-1 [81.5 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main armel libssw0 armel 1.1-13 [20.9 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main armel libseqlib2 armel 1.2.0+dfsg-6 [139 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main armel libssw-dev armel 1.1-13 [24.4 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main armel libseqlib-dev armel 1.2.0+dfsg-6 [205 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main armel libsmithwaterman0 armel 0.0+git20160702.2610e25-12 [32.2 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main armel libsmithwaterman-dev armel 0.0+git20160702.2610e25-12 [37.9 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.4.0-3 [1761 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main armel libtabixpp0 armel 1.1.0-4 [8528 B] Get:173 http://debian.oregonstate.edu/debian unstable/main armel libtabixpp-dev armel 1.1.0-4 [8156 B] Get:174 http://debian.oregonstate.edu/debian unstable/main armel libvcflib1 armel 1.0.2+dfsg-2 [136 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main armel libvcflib-dev armel 1.0.2+dfsg-2 [84.9 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main amd64 ninja-build amd64 1.10.1-1 [112 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main amd64 python3-pkg-resources all 58.2.0-1 [192 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main amd64 python3-lib2to3 all 3.9.7-1 [79.4 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main amd64 python3-distutils all 3.9.7-1 [146 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main amd64 meson all 0.59.2-1 [496 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main armel samtools armel 1.13-2 [538 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 290 MB in 2s (124 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10545 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.37.2-3_amd64.deb ... Unpacking bsdextrautils (2.37.2-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../05-perl-modules-5.32_5.32.1-6_all.deb ... Unpacking perl-modules-5.32 (5.32.1-6) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../06-libperl5.32_5.32.1-6_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-6) ... Selecting previously unselected package perl. Preparing to unpack .../07-perl_5.32.1-6_amd64.deb ... Unpacking perl (5.32.1-6) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../08-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package libpython3.9-minimal:amd64. Preparing to unpack .../09-libpython3.9-minimal_3.9.7-4_amd64.deb ... Unpacking libpython3.9-minimal:amd64 (3.9.7-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../10-libexpat1_2.4.1-2+b1_amd64.deb ... Unpacking libexpat1:amd64 (2.4.1-2+b1) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../11-python3.9-minimal_3.9.7-4_amd64.deb ... Unpacking python3.9-minimal (3.9.7-4) ... Setting up libpython3.9-minimal:amd64 (3.9.7-4) ... Setting up libexpat1:amd64 (2.4.1-2+b1) ... Setting up python3.9-minimal (3.9.7-4) ... Selecting previously unselected package python3-minimal. (Reading database ... 13385 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../3-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../4-libpython3.9-stdlib_3.9.7-4_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.7-4) ... Selecting previously unselected package python3.9. Preparing to unpack .../5-python3.9_3.9.7-4_amd64.deb ... Unpacking python3.9 (3.9.7-4) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../6-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... 13791 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package gcc-11-base:armel. Preparing to unpack .../001-gcc-11-base_11.2.0-9_armel.deb ... Unpacking gcc-11-base:armel (11.2.0-9) ... Selecting previously unselected package gcc-9-base:armel. Preparing to unpack .../002-gcc-9-base_9.4.0-3_armel.deb ... Unpacking gcc-9-base:armel (9.4.0-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../008-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../009-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.71-2_all.deb ... Unpacking autoconf (2.71-2) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../012-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../013-automake_1%3a1.16.4-2_all.deb ... Unpacking automake (1:1.16.4-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../014-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package bc. Preparing to unpack .../015-bc_1.07.1-3+b1_amd64.deb ... Unpacking bc (1.07.1-3+b1) ... Selecting previously unselected package binutils-arm-linux-gnueabi. Preparing to unpack .../016-binutils-arm-linux-gnueabi_2.37-7_amd64.deb ... Unpacking binutils-arm-linux-gnueabi (2.37-7) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../017-libcrypt-dev_1%3a4.4.25-2_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.25-2) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../018-libtirpc-dev_1.3.2-2_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.2-2) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../019-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package rpcsvc-proto. Preparing to unpack .../020-rpcsvc-proto_1.4.2-4_amd64.deb ... Unpacking rpcsvc-proto (1.4.2-4) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../021-libc6-dev_2.32-4_amd64.deb ... Unpacking libc6-dev:amd64 (2.32-4) ... Selecting previously unselected package libstdc++-11-dev:amd64. Preparing to unpack .../022-libstdc++-11-dev_11.2.0-9_amd64.deb ... Unpacking libstdc++-11-dev:amd64 (11.2.0-9) ... Selecting previously unselected package g++-11. Preparing to unpack .../023-g++-11_11.2.0-9_amd64.deb ... Unpacking g++-11 (11.2.0-9) ... Selecting previously unselected package g++. Preparing to unpack .../024-g++_4%3a11.2.0-2_amd64.deb ... Unpacking g++ (4:11.2.0-2) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../025-libdpkg-perl_1.20.9_all.deb ... Unpacking libdpkg-perl (1.20.9) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../026-dpkg-dev_1.20.9_all.deb ... Unpacking dpkg-dev (1.20.9) ... Selecting previously unselected package build-essential. Preparing to unpack .../027-build-essential_12.9_amd64.deb ... Unpacking build-essential (12.9) ... Selecting previously unselected package gcc-11-arm-linux-gnueabi-base:amd64. Preparing to unpack .../028-gcc-11-arm-linux-gnueabi-base_11.2.0-9cross1_amd64.deb ... Unpacking gcc-11-arm-linux-gnueabi-base:amd64 (11.2.0-9cross1) ... Selecting previously unselected package cpp-11-arm-linux-gnueabi. Preparing to unpack .../029-cpp-11-arm-linux-gnueabi_11.2.0-9cross1_amd64.deb ... Unpacking cpp-11-arm-linux-gnueabi (11.2.0-9cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabi. Preparing to unpack .../030-cpp-arm-linux-gnueabi_4%3a11.2.0-2_amd64.deb ... Unpacking cpp-arm-linux-gnueabi (4:11.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../031-cross-config_2.6.18+nmu2_all.deb ... Unpacking cross-config (2.6.18+nmu2) ... Selecting previously unselected package gcc-11-cross-base. Preparing to unpack .../032-gcc-11-cross-base_11.2.0-9cross1_all.deb ... Unpacking gcc-11-cross-base (11.2.0-9cross1) ... Selecting previously unselected package libc6-armel-cross. Preparing to unpack .../033-libc6-armel-cross_2.32-1cross4_all.deb ... Unpacking libc6-armel-cross (2.32-1cross4) ... Selecting previously unselected package libgcc-s1-armel-cross. Preparing to unpack .../034-libgcc-s1-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libgcc-s1-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libgomp1-armel-cross. Preparing to unpack .../035-libgomp1-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libgomp1-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libatomic1-armel-cross. Preparing to unpack .../036-libatomic1-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libatomic1-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libasan6-armel-cross. Preparing to unpack .../037-libasan6-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libasan6-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libstdc++6-armel-cross. Preparing to unpack .../038-libstdc++6-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libstdc++6-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libubsan1-armel-cross. Preparing to unpack .../039-libubsan1-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libubsan1-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package libgcc-11-dev-armel-cross. Preparing to unpack .../040-libgcc-11-dev-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libgcc-11-dev-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package gcc-11-arm-linux-gnueabi. Preparing to unpack .../041-gcc-11-arm-linux-gnueabi_11.2.0-9cross1_amd64.deb ... Unpacking gcc-11-arm-linux-gnueabi (11.2.0-9cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabi. Preparing to unpack .../042-gcc-arm-linux-gnueabi_4%3a11.2.0-2_amd64.deb ... Unpacking gcc-arm-linux-gnueabi (4:11.2.0-2) ... Selecting previously unselected package linux-libc-dev-armel-cross. Preparing to unpack .../043-linux-libc-dev-armel-cross_5.10.46-4cross4_all.deb ... Unpacking linux-libc-dev-armel-cross (5.10.46-4cross4) ... Selecting previously unselected package libc6-dev-armel-cross. Preparing to unpack .../044-libc6-dev-armel-cross_2.32-1cross4_all.deb ... Unpacking libc6-dev-armel-cross (2.32-1cross4) ... Selecting previously unselected package libstdc++-11-dev-armel-cross. Preparing to unpack .../045-libstdc++-11-dev-armel-cross_11.2.0-9cross1_all.deb ... Unpacking libstdc++-11-dev-armel-cross (11.2.0-9cross1) ... Selecting previously unselected package g++-11-arm-linux-gnueabi. Preparing to unpack .../046-g++-11-arm-linux-gnueabi_11.2.0-9cross1_amd64.deb ... Unpacking g++-11-arm-linux-gnueabi (11.2.0-9cross1) ... Selecting previously unselected package g++-arm-linux-gnueabi. Preparing to unpack .../047-g++-arm-linux-gnueabi_4%3a11.2.0-2_amd64.deb ... Unpacking g++-arm-linux-gnueabi (4:11.2.0-2) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../048-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../049-libio-string-perl_1.08-3.1_all.deb ... Unpacking libio-string-perl (1.08-3.1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../050-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../051-libxml2_2.9.12+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.12+dfsg-5) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../052-libxml-namespacesupport-perl_1.12-1.1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1.1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../053-libxml-sax-base-perl_1.09-1.1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1.1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../054-libxml-sax-perl_1.02+dfsg-3_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-3) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../055-libxml-libxml-perl_2.0134+dfsg-2+b1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../056-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../057-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../058-libconfig-auto-perl_0.44-1.1_all.deb ... Unpacking libconfig-auto-perl (0.44-1.1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../059-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../060-libfile-homedir-perl_1.006-1_all.deb ... Unpacking libfile-homedir-perl (1.006-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../061-libdebian-dpkgcross-perl_2.6.18+nmu2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.18+nmu2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../062-dpkg-cross_2.6.18+nmu2_all.deb ... Unpacking dpkg-cross (2.6.18+nmu2) ... Selecting previously unselected package crossbuild-essential-armel. Preparing to unpack .../063-crossbuild-essential-armel_12.9_all.deb ... Unpacking crossbuild-essential-armel (12.9) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../064-libdebhelper-perl_13.5.2_all.deb ... Unpacking libdebhelper-perl (13.5.2) ... Selecting previously unselected package libtool. Preparing to unpack .../065-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../066-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../067-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../068-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../069-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../070-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../071-libelf1_0.185-2_amd64.deb ... Unpacking libelf1:amd64 (0.185-2) ... Selecting previously unselected package dwz. Preparing to unpack .../072-dwz_0.14-1_amd64.deb ... Unpacking dwz (0.14-1) ... Selecting previously unselected package gettext. Preparing to unpack .../073-gettext_0.21-4_amd64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../074-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../075-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../076-debhelper_13.5.2_all.deb ... Unpacking debhelper (13.5.2) ... Selecting previously unselected package libgcc-s1:armel. Preparing to unpack .../077-libgcc-s1_11.2.0-9_armel.deb ... Unpacking libgcc-s1:armel (11.2.0-9) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../078-libc6_2.32-4_armel.deb ... Unpacking libc6:armel (2.32-4) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../079-libasan5_9.4.0-3_armel.deb ... Unpacking libasan5:armel (9.4.0-3) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../080-libatomic1_11.2.0-9_armel.deb ... Unpacking libatomic1:armel (11.2.0-9) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../081-libstdc++6_11.2.0-9_armel.deb ... Unpacking libstdc++6:armel (11.2.0-9) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../082-zlib1g_1%3a1.2.11.dfsg-2_armel.deb ... Unpacking zlib1g:armel (1:1.2.11.dfsg-2) ... Selecting previously unselected package libbamtools2.5.1:armel. Preparing to unpack .../083-libbamtools2.5.1_2.5.1+dfsg-9_armel.deb ... Unpacking libbamtools2.5.1:armel (2.5.1+dfsg-9) ... Selecting previously unselected package libbamtools-dev:armel. Preparing to unpack .../084-libbamtools-dev_2.5.1+dfsg-9_armel.deb ... Unpacking libbamtools-dev:armel (2.5.1+dfsg-9) ... Selecting previously unselected package libbrotli1:armel. Preparing to unpack .../085-libbrotli1_1.0.9-2+b2_armel.deb ... Unpacking libbrotli1:armel (1.0.9-2+b2) ... Selecting previously unselected package libbwa-dev:armel. Preparing to unpack .../086-libbwa-dev_0.7.17-6+b1_armel.deb ... Unpacking libbwa-dev:armel (0.7.17-6+b1) ... Selecting previously unselected package libbz2-1.0:armel. Preparing to unpack .../087-libbz2-1.0_1.0.8-4_armel.deb ... Unpacking libbz2-1.0:armel (1.0.8-4) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../088-linux-libc-dev_5.14.9-2_armel.deb ... Unpacking linux-libc-dev:armel (5.14.9-2) ... Selecting previously unselected package libcrypt1:armel. Preparing to unpack .../089-libcrypt1_1%3a4.4.25-2_armel.deb ... Unpacking libcrypt1:armel (1:4.4.25-2) ... Selecting previously unselected package libcrypt-dev:armel. Preparing to unpack .../090-libcrypt-dev_1%3a4.4.25-2_armel.deb ... Unpacking libcrypt-dev:armel (1:4.4.25-2) ... Selecting previously unselected package libcom-err2:armel. Preparing to unpack .../091-libcom-err2_1.46.4-1_armel.deb ... Unpacking libcom-err2:armel (1.46.4-1) ... Selecting previously unselected package libkrb5support0:armel. Preparing to unpack .../092-libkrb5support0_1.18.3-7_armel.deb ... Unpacking libkrb5support0:armel (1.18.3-7) ... Selecting previously unselected package libk5crypto3:armel. Preparing to unpack .../093-libk5crypto3_1.18.3-7_armel.deb ... Unpacking libk5crypto3:armel (1.18.3-7) ... Selecting previously unselected package libkeyutils1:armel. Preparing to unpack .../094-libkeyutils1_1.6.1-2_armel.deb ... Unpacking libkeyutils1:armel (1.6.1-2) ... Selecting previously unselected package libssl1.1:armel. Preparing to unpack .../095-libssl1.1_1.1.1l-1_armel.deb ... Unpacking libssl1.1:armel (1.1.1l-1) ... Selecting previously unselected package libkrb5-3:armel. Preparing to unpack .../096-libkrb5-3_1.18.3-7_armel.deb ... Unpacking libkrb5-3:armel (1.18.3-7) ... Selecting previously unselected package libgssapi-krb5-2:armel. Preparing to unpack .../097-libgssapi-krb5-2_1.18.3-7_armel.deb ... Unpacking libgssapi-krb5-2:armel (1.18.3-7) ... Selecting previously unselected package libtirpc3:armel. Preparing to unpack .../098-libtirpc3_1.3.2-2_armel.deb ... Unpacking libtirpc3:armel (1.3.2-2) ... Selecting previously unselected package libnsl2:armel. Preparing to unpack .../099-libnsl2_1.3.0-2_armel.deb ... Unpacking libnsl2:armel (1.3.0-2) ... Selecting previously unselected package libtirpc-dev:armel. Preparing to unpack .../100-libtirpc-dev_1.3.2-2_armel.deb ... Unpacking libtirpc-dev:armel (1.3.2-2) ... Selecting previously unselected package libnsl-dev:armel. Preparing to unpack .../101-libnsl-dev_1.3.0-2_armel.deb ... Unpacking libnsl-dev:armel (1.3.0-2) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../102-libc6-dev_2.32-4_armel.deb ... Unpacking libc6-dev:armel (2.32-4) ... Selecting previously unselected package libgmp10:armel. Preparing to unpack .../103-libgmp10_2%3a6.2.1+dfsg-2_armel.deb ... Unpacking libgmp10:armel (2:6.2.1+dfsg-2) ... Selecting previously unselected package libnettle8:armel. Preparing to unpack .../104-libnettle8_3.7.3-1_armel.deb ... Unpacking libnettle8:armel (3.7.3-1) ... Selecting previously unselected package libhogweed6:armel. Preparing to unpack .../105-libhogweed6_3.7.3-1_armel.deb ... Unpacking libhogweed6:armel (3.7.3-1) ... Selecting previously unselected package libunistring2:armel. Preparing to unpack .../106-libunistring2_0.9.10-6_armel.deb ... Unpacking libunistring2:armel (0.9.10-6) ... Selecting previously unselected package libidn2-0:armel. Preparing to unpack .../107-libidn2-0_2.3.2-2_armel.deb ... Unpacking libidn2-0:armel (2.3.2-2) ... Selecting previously unselected package libffi8:armel. Preparing to unpack .../108-libffi8_3.4.2-3_armel.deb ... Unpacking libffi8:armel (3.4.2-3) ... Selecting previously unselected package libp11-kit0:armel. Preparing to unpack .../109-libp11-kit0_0.24.0-5_armel.deb ... Unpacking libp11-kit0:armel (0.24.0-5) ... Selecting previously unselected package libtasn1-6:armel. Preparing to unpack .../110-libtasn1-6_4.17.0-2_armel.deb ... Unpacking libtasn1-6:armel (4.17.0-2) ... Selecting previously unselected package libgnutls30:armel. Preparing to unpack .../111-libgnutls30_3.7.2-2_armel.deb ... Unpacking libgnutls30:armel (3.7.2-2) ... Selecting previously unselected package libdb5.3:armel. Preparing to unpack .../112-libdb5.3_5.3.28+dfsg1-0.8_armel.deb ... Unpacking libdb5.3:armel (5.3.28+dfsg1-0.8) ... Selecting previously unselected package libsasl2-modules-db:armel. Preparing to unpack .../113-libsasl2-modules-db_2.1.27+dfsg-2.1_armel.deb ... Unpacking libsasl2-modules-db:armel (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:armel. Preparing to unpack .../114-libsasl2-2_2.1.27+dfsg-2.1_armel.deb ... Unpacking libsasl2-2:armel (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:armel. Preparing to unpack .../115-libldap-2.4-2_2.4.59+dfsg-1_armel.deb ... Unpacking libldap-2.4-2:armel (2.4.59+dfsg-1) ... Selecting previously unselected package libnghttp2-14:armel. Preparing to unpack .../116-libnghttp2-14_1.43.0-1_armel.deb ... Unpacking libnghttp2-14:armel (1.43.0-1) ... Selecting previously unselected package libpsl5:armel. Preparing to unpack .../117-libpsl5_0.21.0-1.2_armel.deb ... Unpacking libpsl5:armel (0.21.0-1.2) ... Selecting previously unselected package librtmp1:armel. Preparing to unpack .../118-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armel.deb ... Unpacking librtmp1:armel (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:armel. Preparing to unpack .../119-libssh2-1_1.10.0-2_armel.deb ... Unpacking libssh2-1:armel (1.10.0-2) ... Selecting previously unselected package libcurl3-gnutls:armel. Preparing to unpack .../120-libcurl3-gnutls_7.74.0-1.3+b1_armel.deb ... Unpacking libcurl3-gnutls:armel (7.74.0-1.3+b1) ... Selecting previously unselected package libcurl4-gnutls-dev:armel. Preparing to unpack .../121-libcurl4-gnutls-dev_7.74.0-1.3+b1_armel.deb ... Unpacking libcurl4-gnutls-dev:armel (7.74.0-1.3+b1) ... Selecting previously unselected package libdeflate0:armel. Preparing to unpack .../122-libdeflate0_1.8-1_armel.deb ... Unpacking libdeflate0:armel (1.8-1) ... Selecting previously unselected package libdeflate-dev:armel. Preparing to unpack .../123-libdeflate-dev_1.8-1_armel.deb ... Unpacking libdeflate-dev:armel (1.8-1) ... Selecting previously unselected package libdisorder0:armel. Preparing to unpack .../124-libdisorder0_0.0.2+git20130809.8062ee1-3_armel.deb ... Unpacking libdisorder0:armel (0.0.2+git20130809.8062ee1-3) ... Selecting previously unselected package libdisorder-dev:armel. Preparing to unpack .../125-libdisorder-dev_0.0.2+git20130809.8062ee1-3_armel.deb ... Unpacking libdisorder-dev:armel (0.0.2+git20130809.8062ee1-3) ... Selecting previously unselected package libfastahack0:armel. Preparing to unpack .../126-libfastahack0_1.0.0+dfsg-8_armel.deb ... Unpacking libfastahack0:armel (1.0.0+dfsg-8) ... Selecting previously unselected package libfastahack-dev:armel. Preparing to unpack .../127-libfastahack-dev_1.0.0+dfsg-8_armel.deb ... Unpacking libfastahack-dev:armel (1.0.0+dfsg-8) ... Selecting previously unselected package libfml0:armel. Preparing to unpack .../128-libfml0_0.1+git20190320.b499514-1+b1_armel.deb ... Unpacking libfml0:armel (0.1+git20190320.b499514-1+b1) ... Selecting previously unselected package zlib1g-dev:armel. Preparing to unpack .../129-zlib1g-dev_1%3a1.2.11.dfsg-2_armel.deb ... Unpacking zlib1g-dev:armel (1:1.2.11.dfsg-2) ... Selecting previously unselected package libfml-dev:armel. Preparing to unpack .../130-libfml-dev_0.1+git20190320.b499514-1+b1_armel.deb ... Unpacking libfml-dev:armel (0.1+git20190320.b499514-1+b1) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../131-libgomp1_11.2.0-9_armel.deb ... Unpacking libgomp1:armel (11.2.0-9) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../132-libubsan1_11.2.0-9_armel.deb ... Unpacking libubsan1:armel (11.2.0-9) ... Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../133-libgcc-9-dev_9.4.0-3_armel.deb ... Unpacking libgcc-9-dev:armel (9.4.0-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../134-libglib2.0-0_2.70.0-1+b1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.70.0-1+b1) ... Selecting previously unselected package libhtscodecs2:armel. Preparing to unpack .../135-libhtscodecs2_1.1.1-3+b1_armel.deb ... Unpacking libhtscodecs2:armel (1.1.1-3+b1) ... Selecting previously unselected package liblzma5:armel. Preparing to unpack .../136-liblzma5_5.2.5-2_armel.deb ... Unpacking liblzma5:armel (5.2.5-2) ... Selecting previously unselected package libhts3:armel. Preparing to unpack .../137-libhts3_1.13+ds-2_armel.deb ... Unpacking libhts3:armel (1.13+ds-2) ... Selecting previously unselected package liblzma-dev:armel. Preparing to unpack .../138-liblzma-dev_5.2.5-2_armel.deb ... Unpacking liblzma-dev:armel (5.2.5-2) ... Selecting previously unselected package libhts-dev:armel. Preparing to unpack .../139-libhts-dev_1.13+ds-2_armel.deb ... Unpacking libhts-dev:armel (1.13+ds-2) ... Selecting previously unselected package libjsoncpp24:armel. Preparing to unpack .../140-libjsoncpp24_1.9.4-5_armel.deb ... Unpacking libjsoncpp24:armel (1.9.4-5) ... Selecting previously unselected package libjsoncpp-dev:armel. Preparing to unpack .../141-libjsoncpp-dev_1.9.4-5_armel.deb ... Unpacking libjsoncpp-dev:armel (1.9.4-5) ... Selecting previously unselected package libtinfo6:armel. Preparing to unpack .../142-libtinfo6_6.2+20210905-1_armel.deb ... Unpacking libtinfo6:armel (6.2+20210905-1) ... Selecting previously unselected package libncurses6:armel. Preparing to unpack .../143-libncurses6_6.2+20210905-1_armel.deb ... Unpacking libncurses6:armel (6.2+20210905-1) ... Selecting previously unselected package libssw0:armel. Preparing to unpack .../144-libssw0_1.1-13_armel.deb ... Unpacking libssw0:armel (1.1-13) ... Selecting previously unselected package libseqlib2:armel. Preparing to unpack .../145-libseqlib2_1.2.0+dfsg-6_armel.deb ... Unpacking libseqlib2:armel (1.2.0+dfsg-6) ... Selecting previously unselected package libssw-dev:armel. Preparing to unpack .../146-libssw-dev_1.1-13_armel.deb ... Unpacking libssw-dev:armel (1.1-13) ... Selecting previously unselected package libseqlib-dev:armel. Preparing to unpack .../147-libseqlib-dev_1.2.0+dfsg-6_armel.deb ... Unpacking libseqlib-dev:armel (1.2.0+dfsg-6) ... Selecting previously unselected package libsmithwaterman0:armel. Preparing to unpack .../148-libsmithwaterman0_0.0+git20160702.2610e25-12_armel.deb ... Unpacking libsmithwaterman0:armel (0.0+git20160702.2610e25-12) ... Selecting previously unselected package libsmithwaterman-dev:armel. Preparing to unpack .../149-libsmithwaterman-dev_0.0+git20160702.2610e25-12_armel.deb ... Unpacking libsmithwaterman-dev:armel (0.0+git20160702.2610e25-12) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../150-libstdc++-9-dev_9.4.0-3_armel.deb ... Unpacking libstdc++-9-dev:armel (9.4.0-3) ... Selecting previously unselected package libtabixpp0:armel. Preparing to unpack .../151-libtabixpp0_1.1.0-4_armel.deb ... Unpacking libtabixpp0:armel (1.1.0-4) ... Selecting previously unselected package libtabixpp-dev:armel. Preparing to unpack .../152-libtabixpp-dev_1.1.0-4_armel.deb ... Unpacking libtabixpp-dev:armel (1.1.0-4) ... Selecting previously unselected package libvcflib1:armel. Preparing to unpack .../153-libvcflib1_1.0.2+dfsg-2_armel.deb ... Unpacking libvcflib1:armel (1.0.2+dfsg-2) ... Selecting previously unselected package libvcflib-dev:armel. Preparing to unpack .../154-libvcflib-dev_1.0.2+dfsg-2_armel.deb ... Unpacking libvcflib-dev:armel (1.0.2+dfsg-2) ... Selecting previously unselected package ninja-build. Preparing to unpack .../155-ninja-build_1.10.1-1_amd64.deb ... Unpacking ninja-build (1.10.1-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../156-python3-pkg-resources_58.2.0-1_all.deb ... Unpacking python3-pkg-resources (58.2.0-1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../157-python3-lib2to3_3.9.7-1_all.deb ... Unpacking python3-lib2to3 (3.9.7-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../158-python3-distutils_3.9.7-1_all.deb ... Unpacking python3-distutils (3.9.7-1) ... Selecting previously unselected package meson. Preparing to unpack .../159-meson_0.59.2-1_all.deb ... Unpacking meson (0.59.2-1) ... Selecting previously unselected package pkg-config. Preparing to unpack .../160-pkg-config_0.29.2-1_amd64.deb ... Unpacking pkg-config (0.29.2-1) ... Selecting previously unselected package samtools:armel. Preparing to unpack .../161-samtools_1.13-2_armel.deb ... Unpacking samtools:armel (1.13-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../162-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up media-types (4.0.0) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up gcc-11-base:armel (11.2.0-9) ... Setting up binutils-arm-linux-gnueabi (2.37-7) ... Setting up gcc-11-arm-linux-gnueabi-base:amd64 (11.2.0-9cross1) ... Setting up bsdextrautils (2.37.2-3) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up cpp-11-arm-linux-gnueabi (11.2.0-9cross1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.70.0-1+b1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.1-6) ... Setting up libsqlite3-0:amd64 (3.36.0-2) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:armel (5.14.9-2) ... Setting up bc (1.07.1-3+b1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up ninja-build (1.10.1-1) ... Setting up linux-libc-dev-armel-cross (5.10.46-4cross4) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up cpp-arm-linux-gnueabi (4:11.2.0-2) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libperl5.32:amd64 (5.32.1-6) ... Setting up libbwa-dev:armel (0.7.17-6+b1) ... Setting up libc6-armel-cross (2.32-1cross4) ... Setting up gcc-11-cross-base (11.2.0-9cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up libcrypt-dev:amd64 (1:4.4.25-2) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libc6-dev:amd64 (2.32-4) ... Setting up libc6-dev-armel-cross (2.32-1cross4) ... Setting up libelf1:amd64 (0.185-2) ... Setting up libxml2:amd64 (2.9.12+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libpython3.9-stdlib:amd64 (3.9.7-4) ... Setting up libpython3-stdlib:amd64 (3.9.2-3) ... Setting up gcc-9-base:armel (9.4.0-3) ... Setting up gettext (0.21-4) ... Setting up libgomp1-armel-cross (11.2.0-9cross1) ... Setting up libtool (2.4.6-15) ... Setting up libgcc-s1-armel-cross (11.2.0-9cross1) ... Setting up m4 (1.4.18-5) ... Setting up libstdc++6-armel-cross (11.2.0-9cross1) ... Setting up libatomic1-armel-cross (11.2.0-9cross1) ... Setting up perl (5.32.1-6) ... Setting up libubsan1-armel-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.71-2) ... Setting up libstdc++-11-dev:amd64 (11.2.0-9) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up libsub-override-perl (0.09-2) ... Setting up python3.9 (3.9.7-4) ... Setting up libasan6-armel-cross (11.2.0-9cross1) ... Setting up automake (1:1.16.4-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up libgcc-11-dev-armel-cross (11.2.0-9cross1) ... Setting up g++-11 (11.2.0-9) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up python3 (3.9.2-3) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up pkg-config (0.29.2-1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libstdc++-11-dev-armel-cross (11.2.0-9cross1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up python3-lib2to3 (3.9.7-1) ... Setting up python3-pkg-resources (58.2.0-1) ... Setting up python3-distutils (3.9.7-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gcc-11-arm-linux-gnueabi (11.2.0-9cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up meson (0.59.2-1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-11-arm-linux-gnueabi (11.2.0-9cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up gcc-arm-linux-gnueabi (4:11.2.0-2) ... Setting up debhelper (13.5.2) ... Setting up g++-arm-linux-gnueabi (4:11.2.0-2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armel (12.9) ... Setting up libgcc-s1:armel (11.2.0-9) ... Setting up libc6:armel (2.32-4) ... Setting up libffi8:armel (3.4.2-3) ... Setting up libtasn1-6:armel (4.17.0-2) ... Setting up libbz2-1.0:armel (1.0.8-4) ... Setting up libdb5.3:armel (5.3.28+dfsg1-0.8) ... Setting up libstdc++6:armel (11.2.0-9) ... Setting up libtinfo6:armel (6.2+20210905-1) ... Setting up libhtscodecs2:armel (1.1.1-3+b1) ... Setting up libdisorder0:armel (0.0.2+git20130809.8062ee1-3) ... Setting up libkeyutils1:armel (1.6.1-2) ... Setting up liblzma5:armel (5.2.5-2) ... Setting up libssl1.1:armel (1.1.1l-1) ... Setting up libbrotli1:armel (1.0.9-2+b2) ... Setting up libsmithwaterman0:armel (0.0+git20160702.2610e25-12) ... Setting up libnghttp2-14:armel (1.43.0-1) ... Setting up libunistring2:armel (0.9.10-6) ... Setting up libdeflate0:armel (1.8-1) ... Setting up zlib1g:armel (1:1.2.11.dfsg-2) ... Setting up libcrypt1:armel (1:4.4.25-2) ... Setting up libidn2-0:armel (2.3.2-2) ... Setting up libcom-err2:armel (1.46.4-1) ... Setting up libgomp1:armel (11.2.0-9) ... Setting up libfastahack0:armel (1.0.0+dfsg-8) ... Setting up libkrb5support0:armel (1.18.3-7) ... Setting up libsasl2-modules-db:armel (2.1.27+dfsg-2.1) ... Setting up libfastahack-dev:armel (1.0.0+dfsg-8) ... Setting up libasan5:armel (9.4.0-3) ... Setting up libnettle8:armel (3.7.3-1) ... Setting up libgmp10:armel (2:6.2.1+dfsg-2) ... Setting up libncurses6:armel (6.2+20210905-1) ... Setting up libp11-kit0:armel (0.24.0-5) ... Setting up libbamtools2.5.1:armel (2.5.1+dfsg-9) ... Setting up libatomic1:armel (11.2.0-9) ... Setting up libk5crypto3:armel (1.18.3-7) ... Setting up libdisorder-dev:armel (0.0.2+git20130809.8062ee1-3) ... Setting up libsasl2-2:armel (2.1.27+dfsg-2.1) ... Setting up libjsoncpp24:armel (1.9.4-5) ... Setting up liblzma-dev:armel (5.2.5-2) ... Setting up libubsan1:armel (11.2.0-9) ... Setting up libcrypt-dev:armel (1:4.4.25-2) ... Setting up libssh2-1:armel (1.10.0-2) ... Setting up libkrb5-3:armel (1.18.3-7) ... Setting up libdeflate-dev:armel (1.8-1) ... Setting up libssw0:armel (1.1-13) ... Setting up libjsoncpp-dev:armel (1.9.4-5) ... Setting up libpsl5:armel (0.21.0-1.2) ... Setting up libhogweed6:armel (3.7.3-1) ... Setting up libssw-dev:armel (1.1-13) ... Setting up libfml0:armel (0.1+git20190320.b499514-1+b1) ... Setting up libgcc-9-dev:armel (9.4.0-3) ... Setting up libgnutls30:armel (3.7.2-2) ... Setting up librtmp1:armel (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libbamtools-dev:armel (2.5.1+dfsg-9) ... Setting up libgssapi-krb5-2:armel (1.18.3-7) ... Setting up libsmithwaterman-dev:armel (0.0+git20160702.2610e25-12) ... Setting up libtirpc3:armel (1.3.2-2) ... Setting up libldap-2.4-2:armel (2.4.59+dfsg-1) ... Setting up libcurl3-gnutls:armel (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:armel (7.74.0-1.3+b1) ... Setting up libtirpc-dev:armel (1.3.2-2) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up libhts3:armel (1.13+ds-2) ... Setting up samtools:armel (1.13-2) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libtabixpp0:armel (1.1.0-4) ... Setting up libc6-dev:armel (2.32-4) ... Setting up libseqlib2:armel (1.2.0+dfsg-6) ... Setting up libstdc++-9-dev:armel (9.4.0-3) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-2) ... Setting up libvcflib1:armel (1.0.2+dfsg-2) ... Setting up libfml-dev:armel (0.1+git20190320.b499514-1+b1) ... Setting up libhts-dev:armel (1.13+ds-2) ... Setting up libseqlib-dev:armel (1.2.0+dfsg-6) ... Setting up libtabixpp-dev:armel (1.1.0-4) ... Setting up libvcflib-dev:armel (1.0.2+dfsg-2) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-7 dpkg-dev_1.20.9 g++-11_11.2.0-9 gcc-11_11.2.0-9 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-9 libstdc++-11-dev-armel-cross_11.2.0-9cross1 libstdc++-9-dev_9.4.0-3 libstdc++6_11.2.0-9 libstdc++6-armel-cross_11.2.0-9cross1 linux-libc-dev_5.14.9-2 Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3+b2 bc_1.07.1-3+b1 binutils_2.37-7 binutils-arm-linux-gnueabi_2.37-7 binutils-common_2.37-7 binutils-x86-64-linux-gnu_2.37-7 bsdextrautils_2.37.2-3 bsdutils_1:2.37.2-3 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:11.2.0-2 cpp-11_11.2.0-9 cpp-11-arm-linux-gnueabi_11.2.0-9cross1 cpp-8_8.4.0-7 cpp-arm-linux-gnueabi_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-armel_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.26-1 fdisk_2.37.2-3 file_1:5.39-3 findutils_4.8.0-1 g++_4:11.2.0-2 g++-11_11.2.0-9 g++-11-arm-linux-gnueabi_11.2.0-9cross1 g++-arm-linux-gnueabi_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-11 gcc-11_11.2.0-9 gcc-11-arm-linux-gnueabi_11.2.0-9cross1 gcc-11-arm-linux-gnueabi-base_11.2.0-9cross1 gcc-11-base_11.2.0-9 gcc-11-cross-base_11.2.0-9cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-3 gcc-arm-linux-gnueabi_4:11.2.0-2 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.3.9 libarchive-zip-perl_1.68-1 libasan5_9.4.0-3 libasan6_11.2.0-9 libasan6-armel-cross_11.2.0-9cross1 libatomic1_11.2.0-9 libatomic1-armel-cross_11.2.0-9cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.6-1 libaudit1_1:3.0.6-1 libbamtools-dev_2.5.1+dfsg-9 libbamtools2.5.1_2.5.1+dfsg-9 libbinutils_2.37-7 libblkid1_2.37.2-3 libbrotli1_1.0.9-2+b2 libbwa-dev_0.7.17-6+b1 libbz2-1.0_1.0.8-4 libc-bin_2.32-4 libc-dev-bin_2.32-4 libc6_2.32-4 libc6-armel-cross_2.32-1cross4 libc6-dev_2.32-4 libc6-dev-armel-cross_2.32-1cross4 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-9 libcom-err2_1.46.4-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.25-2 libcrypt1_1:4.4.25-2 libctf-nobfd0_2.37-7 libctf0_2.37-7 libcurl3-gnutls_7.74.0-1.3+b1 libcurl4-gnutls-dev_7.74.0-1.3+b1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.5.2 libdebian-dpkgcross-perl_2.6.18+nmu2 libdeflate-dev_1.8-1 libdeflate0_1.8-1 libdisorder-dev_0.0.2+git20130809.8062ee1-3 libdisorder0_0.0.2+git20130809.8062ee1-3 libdpkg-perl_1.20.9 libelf1_0.185-2 libexpat1_2.4.1-2+b1 libext2fs2_1.46.4-1 libfakeroot_1.26-1 libfastahack-dev_1.0.0+dfsg-8 libfastahack0_1.0.0+dfsg-8 libfdisk1_2.37.2-3 libffi6_3.2.1-9 libffi8_3.4.2-3 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libfml-dev_0.1+git20190320.b499514-1+b1 libfml0_0.1+git20190320.b499514-1+b1 libgcc-11-dev_11.2.0-9 libgcc-11-dev-armel-cross_11.2.0-9cross1 libgcc-9-dev_9.4.0-3 libgcc-s1_11.2.0-9 libgcc-s1-armel-cross_11.2.0-9cross1 libgcrypt20_1.9.4-3+b1 libgdbm-compat4_1.21-1 libgdbm6_1.21-1 libglib2.0-0_2.70.0-1+b1 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-9 libgomp1-armel-cross_11.2.0-9cross1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libhts-dev_1.13+ds-2 libhts3_1.13+ds-2 libhtscodecs2_1.1.1-3+b1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.24-2 libitm1_11.2.0-9 libjsoncpp-dev_1.9.4-5 libjsoncpp24_1.9.4-5 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblsan0_11.2.0-9 liblz4-1_1.9.3-2 liblzma-dev_5.2.5-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.37.2-3 libmpc3_1.2.0-1 libmpdec3_2.5.1-2 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncurses6_6.2+20210905-1 libncursesw6_6.2+20210905-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-6 libpipeline1_1.5.3-1 libpsl5_0.21.0-1.2 libpython3-stdlib_3.9.2-3 libpython3.9-minimal_3.9.7-4 libpython3.9-stdlib_3.9.7-4 libquadmath0_11.2.0-9 libreadline8_8.1-2 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.2-2 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libseqlib-dev_1.2.0+dfsg-6 libseqlib2_1.2.0+dfsg-6 libsigsegv2_2.13-1 libsmartcols1_2.37.2-3 libsmithwaterman-dev_0.0+git20160702.2610e25-12 libsmithwaterman0_0.0+git20160702.2610e25-12 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssh2-1_1.10.0-2 libssl1.1_1.1.1l-1 libssw-dev_1.1-13 libssw0_1.1-13 libstdc++-11-dev_11.2.0-9 libstdc++-11-dev-armel-cross_11.2.0-9cross1 libstdc++-9-dev_9.4.0-3 libstdc++6_11.2.0-9 libstdc++6-armel-cross_11.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_249.5-1 libtabixpp-dev_1.1.0-4 libtabixpp0_1.1.0-4 libtasn1-6_4.17.0-2 libtinfo6_6.2+20210905-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-9 libubsan1_11.2.0-9 libubsan1-armel-cross_11.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_249.5-1 libunistring2_0.9.10-6 libuuid1_2.37.2-3 libvcflib-dev_1.0.2+dfsg-2 libvcflib1_1.0.2+dfsg-2 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.14.9-2 linux-libc-dev-armel-cross_5.10.46-4cross4 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 media-types_4.0.0 meson_0.59.2-1 mount_2.37.2-3 ncurses-base_6.2+20210905-1 ncurses-bin_6.2+20210905-1 ninja-build_1.10.1-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-6 pkg-config_0.29.2-1 po-debconf_1.0.21+nmu1 python3_3.9.2-3 python3-distutils_3.9.7-1 python3-lib2to3_3.9.7-1 python3-minimal_3.9.2-3 python3-pkg-resources_58.2.0-1 python3.9_3.9.7-4 python3.9-minimal_3.9.7-4 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 samtools_1.13-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021c-2 ucf_3.0043 util-linux_2.37.2-3 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: freebayes Binary: freebayes Architecture: any Version: 1.3.5-3 Maintainer: Debian Med Packaging Team Uploaders: Brad Chapman , Andreas Tille Homepage: https://github.com/ekg/freebayes Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/freebayes Vcs-Git: https://salsa.debian.org/med-team/freebayes.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.0~rc2+dfsg-3~), libtabixpp-dev, libseqlib-dev (>= 1.1.2+dfsg-5), bc, samtools, parallel , libvcflib-tools Package-List: freebayes deb science optional arch=any Checksums-Sha1: 7e677dd88ba1721ec5a397cbd72015fe530861af 2890213 freebayes_1.3.5.orig.tar.gz 948b434123f7ce7ddcd028db7f78eab261c8cab1 11356 freebayes_1.3.5-3.debian.tar.xz Checksums-Sha256: af195a8c54b742d01af5a7e1fd1781a89290d726b310216c83e78c650d7aee49 2890213 freebayes_1.3.5.orig.tar.gz 8c8d06479b35e808cc8ad8d606959b1ff9156c7813e626a1a73cf2a1dc656046 11356 freebayes_1.3.5-3.debian.tar.xz Files: 0474f30e2cc128973cac9d12ea726d50 2890213 freebayes_1.3.5.orig.tar.gz 5f8bb4c2d82561a94a5fe827c31a05cf 11356 freebayes_1.3.5-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmFek34RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEL8Q//boYo8I9zX88InZaqkFefO6lqyFbkksZ1 9T8KtJe1bfnoJjDpzC0ublO9DlqN/V6lMUzGcsRnlHEzyGx8jfGU9OHsstZhNMvM uXh/0P+r1RZGrf/llzKypuoo/B/dZBp9q/lRxetmqJl0gQrEy+N5i4cGdj3igu/w 6DhQAbR56L0xkDMwOARBiC+3dOMkwtMP8KleGgLm+EF/YvH5l+Rdz1FJAT6VAxMy NcmmfprFfzCKBTs80EjQfypXJfJKSbyAQuaytgljl5+/q3hsETl2tmnPMfXXQllq 90GTfKtnBYyZMqzH/Vlw0+RThjsQZt2UhVJQgnw/j+zSmfZw9/orct8TCn1RfUlN 8REVxCMbMN8A/hErnDzHHhiCx8kEdmMYZtmNyh+7amKiSk9g6aRT6xI1N2s3zC4O 2vvn9lBrHiZFFp1fb+ZGB8HGKfRgRIVMV0abFQsDjviJb4W8a5fmU57p0QEuAX5s WfHjoAtpylIIJ+Fr8lNSfVhmmT4eBiNkKDaVTMOvuksfkC7CWlc0b81CmY6zPjEc F+GnR5OQpzzuDQ5F0VLQIVVkASFBodGX0W9l4rRxRDP527IznVsi5WgXHa+06kKS FGbjtc4YctDwOgdPNCgtfwG4WcT0EnY/sO9Bil8Y+qCvWHC/8QR9PaiVvU/eZbo9 F90epd7WOoQ= =3SK/ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.DSLy_LHP/trustedkeys.kbx': General error gpgv: Signature made Thu Oct 7 06:28:14 2021 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./freebayes_1.3.5-3.dsc dpkg-source: info: extracting freebayes in /<> dpkg-source: info: unpacking freebayes_1.3.5.orig.tar.gz dpkg-source: info: unpacking freebayes_1.3.5-3.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e9c281e7-5583-4041-bfa4-7289d9bb7226 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package freebayes dpkg-buildpackage: info: source version 1.3.5-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean --buildsystem=meson --builddir=build dh_auto_clean -O--buildsystem=meson -O--builddir=build dh_autoreconf_clean -O--buildsystem=meson -O--builddir=build dh_clean -O--buildsystem=meson -O--builddir=build debian/rules binary-arch dh binary-arch --buildsystem=meson --builddir=build dh_update_autotools_config -a -O--buildsystem=meson -O--builddir=build dh_autoreconf -a -O--buildsystem=meson -O--builddir=build dh_auto_configure -a -O--buildsystem=meson -O--builddir=build cd build && LC_ALL=C.UTF-8 meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/arm-linux-gnueabi --cross-file /<>/debian/.debhelper/generated/_source/meson-cross-file.conf DEPRECATION: c_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: c_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. The Meson build system Version: 0.59.2 Source dir: /<> Build dir: /<>/build Build type: cross build Project name: freebayes Project version: 1.3.4 C compiler for the host machine: /usr/bin/arm-linux-gnueabi-gcc (gcc 11.2.0 "arm-linux-gnueabi-gcc (Debian 11.2.0-9) 11.2.0") C linker for the host machine: /usr/bin/arm-linux-gnueabi-gcc ld.bfd 2.37 C++ compiler for the host machine: /usr/bin/arm-linux-gnueabi-g++ (gcc 11.2.0 "arm-linux-gnueabi-g++ (Debian 11.2.0-9) 11.2.0") C++ linker for the host machine: /usr/bin/arm-linux-gnueabi-g++ ld.bfd 2.37 C compiler for the build machine: cc (gcc 11.2.0 "cc (Debian 11.2.0-9) 11.2.0") C linker for the build machine: cc ld.bfd 2.37 C++ compiler for the build machine: c++ (gcc 11.2.0 "c++ (Debian 11.2.0-9) 11.2.0") C++ linker for the build machine: c++ ld.bfd 2.37 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: arm Host machine cpu: armel Target machine cpu family: arm Target machine cpu: armel Found pkg-config: /usr/bin/arm-linux-gnueabi-pkg-config (0.29.2) Run-time dependency zlib found: YES 1.2.11 Run-time dependency liblzma found: YES 5.2.5 Run-time dependency threads found: YES Run-time dependency htslib found: YES 1.13+ds Library tabixpp found: YES Run-time dependency libvcflib found: YES 1.0 Run-time dependency libseqlib found: YES 1.0 Compiler for C++ supports arguments -fpermissive: YES Compiler for C++ supports arguments -Wno-reorder: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Program prove found: YES (/usr/bin/prove) Build targets in project: 3 Option optimization is: 0 [default: 3] Found ninja-1.10.1 at /usr/bin/ninja dh_auto_build -a -O--buildsystem=meson -O--builddir=build cd build && LC_ALL=C.UTF-8 ninja -j1 -v [1/27] /usr/bin/arm-linux-gnueabi-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Allele.cpp.o -MF libfreebayes_common.a.p/src_Allele.cpp.o.d -o libfreebayes_common.a.p/src_Allele.cpp.o -c ../src/Allele.cpp ../src/Allele.cpp: In member function ‘const short int Allele::currentQuality() const’: ../src/Allele.cpp:160:12: warning: enumeration value ‘ALLELE_GENOTYPE’ not handled in switch [-Wswitch] 160 | switch (this->type) { | ^ ../src/Allele.cpp:160:12: warning: enumeration value ‘ALLELE_NULL’ not handled in switch [-Wswitch] In file included from /usr/arm-linux-gnueabi/include/c++/11/vector:72, from ../src/Allele.h:8, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Allele&}; _Tp = Allele; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/vector:67, from ../src/Allele.h:8, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h: In function ‘std::vector > groupAlleles_copy(std::vector&, bool (*)(Allele&, Allele&))’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h: In function ‘std::vector > groupAlleles_copy(std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h: In function ‘std::vector > groupAlleles_copy(std::__cxx11::list&, bool (*)(Allele&, Allele&))’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h: In function ‘std::vector alleleUnion(std::vector&, std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/vector:72, from ../src/Allele.h:8, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Allele}; _Tp = Allele; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In function ‘std::vector genotypeAllelesFromAlleleGroups(std::vector >&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In function ‘std::vector genotypeAllelesFromAlleles(std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In function ‘std::vector genotypeAllelesFromAlleles(std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc: In function ‘std::vector genotypeAllelesFromAlleleGroups(std::vector >&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/map:60, from ../src/Allele.h:10, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = Allele; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_tree.h:2426:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2426 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/map:61, from ../src/Allele.h:10, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h: In function ‘std::map countAlleles(std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h: In function ‘std::map countAlleles(std::__cxx11::list&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/vector:67, from ../src/Allele.h:8, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h: In function ‘std::vector uniqueAlleles(std::__cxx11::list&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/11/map:61, from ../src/Allele.h:10, from ../src/Allele.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h: In function ‘std::map countAlleles(std::vector&)’: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/11/bits/stl_map.h:501:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 | std::tuple(__k), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 | std::tuple<>()); | ~~~~~~~~~~~~~~~ [2/27] /usr/bin/arm-linux-gnueabi-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_AlleleParser.cpp.o -MF libfreebayes_common.a.p/src_AlleleParser.cpp.o.d -o libfreebayes_common.a.p/src_AlleleParser.cpp.o -c ../src/AlleleParser.cpp FAILED: libfreebayes_common.a.p/src_AlleleParser.cpp.o /usr/bin/arm-linux-gnueabi-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wnon-virtual-dtor -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_AlleleParser.cpp.o -MF libfreebayes_common.a.p/src_AlleleParser.cpp.o.d -o libfreebayes_common.a.p/src_AlleleParser.cpp.o -c ../src/AlleleParser.cpp In file included from ../src/BedReader.h:12, from ../src/AlleleParser.h:20, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/../intervaltree/IntervalTree.h: In member function ‘std::pair<_FIter, _FIter> IntervalTree::extentBruitForce() const’: /usr/include/vcflib/../intervaltree/IntervalTree.h:249:49: error: ‘numeric_limits’ is not a member of ‘std’ 249 | std::pair x = {std::numeric_limits::max(), | ^~~~~~~~~~~~~~ /usr/include/vcflib/../intervaltree/IntervalTree.h:249:70: error: expected primary-expression before ‘>’ token 249 | std::pair x = {std::numeric_limits::max(), | ^ /usr/include/vcflib/../intervaltree/IntervalTree.h:249:73: error: ‘::max’ has not been declared; did you mean ‘std::max’? 249 | std::pair x = {std::numeric_limits::max(), | ^~~ | std::max In file included from /usr/arm-linux-gnueabi/include/c++/11/algorithm:62, from ../src/AlleleParser.h:11, from ../src/AlleleParser.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_algo.h:3467:5: note: ‘std::max’ declared here 3467 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ In file included from ../src/BedReader.h:12, from ../src/AlleleParser.h:20, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/../intervaltree/IntervalTree.h:250:61: error: ‘numeric_limits’ is not a member of ‘std’ 250 | std::numeric_limits::min() }; | ^~~~~~~~~~~~~~ /usr/include/vcflib/../intervaltree/IntervalTree.h:250:82: error: expected primary-expression before ‘>’ token 250 | std::numeric_limits::min() }; | ^ /usr/include/vcflib/../intervaltree/IntervalTree.h:250:85: error: ‘::min’ has not been declared; did you mean ‘std::min’? 250 | std::numeric_limits::min() }; | ^~~ | std::min In file included from /usr/arm-linux-gnueabi/include/c++/11/algorithm:62, from ../src/AlleleParser.h:11, from ../src/AlleleParser.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_algo.h:3455:5: note: ‘std::min’ declared here 3455 | min(initializer_list<_Tp> __l, _Compare __comp) | ^~~ In file included from ../src/BedReader.h:12, from ../src/AlleleParser.h:20, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/../intervaltree/IntervalTree.h: In member function ‘std::pair > IntervalTree::is_valid() const’: /usr/include/vcflib/../intervaltree/IntervalTree.h:270:75: error: ‘numeric_limits’ is not a member of ‘std’ 270 | std::pair> result = {true, { std::numeric_limits::max(), | ^~~~~~~~~~~~~~ /usr/include/vcflib/../intervaltree/IntervalTree.h:270:96: error: expected primary-expression before ‘>’ token 270 | std::pair> result = {true, { std::numeric_limits::max(), | ^ /usr/include/vcflib/../intervaltree/IntervalTree.h:270:99: error: ‘::max’ has not been declared; did you mean ‘std::max’? 270 | std::pair> result = {true, { std::numeric_limits::max(), | ^~~ | std::max In file included from /usr/arm-linux-gnueabi/include/c++/11/algorithm:62, from ../src/AlleleParser.h:11, from ../src/AlleleParser.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_algo.h:3467:5: note: ‘std::max’ declared here 3467 | max(initializer_list<_Tp> __l, _Compare __comp) | ^~~ In file included from ../src/BedReader.h:12, from ../src/AlleleParser.h:20, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/../intervaltree/IntervalTree.h:271:75: error: ‘numeric_limits’ is not a member of ‘std’ 271 | std::numeric_limits::min() }}; | ^~~~~~~~~~~~~~ /usr/include/vcflib/../intervaltree/IntervalTree.h:271:96: error: expected primary-expression before ‘>’ token 271 | std::numeric_limits::min() }}; | ^ /usr/include/vcflib/../intervaltree/IntervalTree.h:271:99: error: ‘::min’ has not been declared; did you mean ‘std::min’? 271 | std::numeric_limits::min() }}; | ^~~ | std::min In file included from /usr/arm-linux-gnueabi/include/c++/11/algorithm:62, from ../src/AlleleParser.h:11, from ../src/AlleleParser.cpp:1: /usr/arm-linux-gnueabi/include/c++/11/bits/stl_algo.h:3455:5: note: ‘std::min’ declared here 3455 | min(initializer_list<_Tp> __l, _Compare __comp) | ^~~ In file included from ../src/BedReader.h:12, from ../src/AlleleParser.h:20, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/../intervaltree/IntervalTree.h: In instantiation of ‘std::pair > IntervalTree::is_valid() const [with Scalar = int; Value = BedTarget*]’: /usr/include/vcflib/../intervaltree/IntervalTree.h:115:13: required from ‘IntervalTree::IntervalTree(IntervalTree::interval_vector&&, std::size_t, std::size_t, std::size_t, Scalar, Scalar) [with Scalar = int; Value = BedTarget*; IntervalTree::interval_vector = std::vector, std::allocator > >; std::size_t = unsigned int]’ ../src/BedReader.h:68:124: required from here /usr/include/vcflib/../intervaltree/IntervalTree.h:270:52: error: could not convert ‘{true, {, }}’ from ‘’ to ‘std::pair >’ 270 | std::pair> result = {true, { std::numeric_limits::max(), | ^~~~~~ | | | ninja: build stopped: subcommand failed. dh_auto_build: error: cd build && LC_ALL=C.UTF-8 ninja -j1 -v returned exit code 1 make: *** [debian/rules:6: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-10-14T10:37:40Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 9036 Build-Time: 15 Distribution: unstable Fail-Stage: build Foreign Architectures: armel Host Architecture: armel Install-Time: 49 Job: freebayes_1.3.5-3 Machine Architecture: amd64 Package: freebayes Package-Time: 78 Source-Version: 1.3.5-3 Space: 9036 Status: attempted Version: 1.3.5-3 -------------------------------------------------------------------------------- Finished at 2021-10-14T10:37:40Z Build needed 00:01:18, 9036k disk space