sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | freebayes 1.3.7-1 (ppc64el) Tue, 22 Aug 2023 09:44:22 +0000 | +==============================================================================+ Package: freebayes Version: 1.3.7-1 Source Version: 1.3.7-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-cd921696-fee5-4c81-ab15-fb70a4b4f2db' with '<>' I: NOTICE: Log filtering will replace 'build/freebayes-1ROGr3/resolver-p3KxH1' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [210 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-08-22-0809.47-F-2023-08-22-0207.17.pdiff [14.0 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-08-22-0809.47-F-2023-08-22-0207.17.pdiff [18.0 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-08-22-0809.47-F-2023-08-22-0207.17.pdiff [14.0 kB] Get:6 http://localhost:3142/debian sid/main ppc64el Packages [9383 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-08-22-0809.47-F-2023-08-22-0207.17.pdiff [18.0 kB] Fetched 9752 kB in 3s (3622 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'freebayes' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/freebayes.git Please use: git clone https://salsa.debian.org/med-team/freebayes.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2916 kB of source archives. Get:1 http://localhost:3142/debian sid/main freebayes 1.3.7-1 (dsc) [2185 B] Get:2 http://localhost:3142/debian sid/main freebayes 1.3.7-1 (tar) [2902 kB] Get:3 http://localhost:3142/debian sid/main freebayes 1.3.7-1 (diff) [11.8 kB] Fetched 2916 kB in 0s (57.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/freebayes-1ROGr3/freebayes-1.3.7' with '<>' I: NOTICE: Log filtering will replace 'build/freebayes-1ROGr3' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.9+dfsg-1~), libtabixpp-dev, libseqlib-dev, bc, samtools, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.9+dfsg-1~), libtabixpp-dev, libseqlib-dev, bc, samtools, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [920 B] Get:5 copy:/<>/apt_archive ./ Packages [917 B] Fetched 2446 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev bc binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbamtools-dev:ppc64el libbamtools2.5.2:ppc64el libbrotli1:ppc64el libbwa-dev:ppc64el libbz2-1.0:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libdisorder-dev:ppc64el libdisorder0:ppc64el libelf1 libexpat1 libfastahack-dev:ppc64el libfastahack0:ppc64el libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:ppc64el libfml0:ppc64el libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libjsoncpp-dev:ppc64el libjsoncpp25:ppc64el libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.5-0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libncursesw6 libnettle8:ppc64el libnghttp2-14:ppc64el libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libpipeline1 libpkgconf3 libpsl5:ppc64el libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8 librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libseqlib-dev:ppc64el libseqlib2:ppc64el libsmithwaterman-dev:ppc64el libsmithwaterman0:ppc64el libsqlite3-0 libssh2-1:ppc64el libssl3:ppc64el libssw-dev:ppc64el libssw0:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtabixpp-dev:ppc64el libtabixpp0:ppc64el libtasn1-6:ppc64el libtinfo6:ppc64el libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libvcflib-dev:ppc64el libvcflib2:ppc64el libwfa2-0:ppc64el libwfa2-dev:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:ppc64el linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db media-types meson ninja-build pkg-config:ppc64el pkgconf:ppc64el pkgconf-bin po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-minimal readline-common samtools:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff libbamtools-doc:ppc64el glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libcurl4-doc:ppc64el libgnutls28-dev:ppc64el libidn-dev:ppc64el libkrb5-dev:ppc64el libldap2-dev:ppc64el librtmp-dev:ppc64el libssh2-1-dev:ppc64el gnutls-bin:ppc64el krb5-doc:ppc64el krb5-user:ppc64el liblzma-doc:ppc64el libstdc++-11-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc python3.11-venv python3.11-doc binfmt-support readline-doc cwltool:ppc64el Recommended packages: curl | wget | lynx ca-certificates:ppc64el libarchive-cpio-perl krb5-locales:ppc64el libldap-common:ppc64el libgpm2:ppc64el libgpm2 publicsuffix:ppc64el libsasl2-modules:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl ca-certificates The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbamtools-dev:ppc64el libbamtools2.5.2:ppc64el libbrotli1:ppc64el libbwa-dev:ppc64el libbz2-1.0:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libdisorder-dev:ppc64el libdisorder0:ppc64el libelf1 libexpat1 libfastahack-dev:ppc64el libfastahack0:ppc64el libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfml-dev:ppc64el libfml0:ppc64el libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libjsoncpp-dev:ppc64el libjsoncpp25:ppc64el libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.5-0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libncursesw6 libnettle8:ppc64el libnghttp2-14:ppc64el libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libpipeline1 libpkgconf3 libpsl5:ppc64el libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0:ppc64el libquadmath0-ppc64el-cross libreadline8 librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libseqlib-dev:ppc64el libseqlib2:ppc64el libsmithwaterman-dev:ppc64el libsmithwaterman0:ppc64el libsqlite3-0 libssh2-1:ppc64el libssl3:ppc64el libssw-dev:ppc64el libssw0:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtabixpp-dev:ppc64el libtabixpp0:ppc64el libtasn1-6:ppc64el libtinfo6:ppc64el libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libvcflib-dev:ppc64el libvcflib2:ppc64el libwfa2-0:ppc64el libwfa2-dev:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:ppc64el linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db media-types meson ninja-build pkg-config:ppc64el pkgconf:ppc64el pkgconf-bin po-debconf python3 python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools python3.11 python3.11-minimal readline-common samtools:ppc64el sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 183 newly installed, 0 to remove and 0 not upgraded. Need to get 119 MB of archives. After this operation, 484 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 libpython3.11-minimal amd64 3.11.4-1 [815 kB] Get:4 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.5.0-2 [99.0 kB] Get:5 http://localhost:3142/debian sid/main amd64 python3.11-minimal amd64 3.11.4-1 [2060 kB] Get:6 http://localhost:3142/debian sid/main amd64 python3-minimal amd64 3.11.4-5+b1 [26.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 media-types all 10.1.0 [26.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.4+20230625-2 [134 kB] Get:9 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:10 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:11 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.42.0-1 [859 kB] Get:12 http://localhost:3142/debian sid/main amd64 libpython3.11-stdlib amd64 3.11.4-1 [1803 kB] Get:13 http://localhost:3142/debian sid/main amd64 python3.11 amd64 3.11.4-1 [579 kB] Get:14 http://localhost:3142/debian sid/main amd64 libpython3-stdlib amd64 3.11.4-5+b1 [9492 B] Get:15 http://localhost:3142/debian sid/main amd64 python3 amd64 3.11.4-5+b1 [26.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:17 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:18 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:19 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:20 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13 [160 kB] Get:21 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:22 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-2 [1176 kB] Get:23 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-1 [88.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:25 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-3 [1386 kB] Get:26 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:27 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:28 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:29 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:30 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:31 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:32 http://localhost:3142/debian sid/main amd64 bc amd64 1.07.1-3+b1 [110 kB] Get:33 http://localhost:3142/debian sid/main amd64 binutils-powerpc64le-linux-gnu amd64 2.41-4 [2776 kB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu-base amd64 13.2.0-2cross1 [39.6 kB] Get:35 http://localhost:3142/debian sid/main amd64 cpp-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [9173 kB] Get:36 http://localhost:3142/debian sid/main amd64 cpp-powerpc64le-linux-gnu amd64 4:13.2.0-1 [4124 B] Get:37 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:38 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:39 http://localhost:3142/debian sid/main amd64 libc6-ppc64el-cross all 2.37-3cross1 [1349 kB] Get:40 http://localhost:3142/debian sid/main amd64 libgcc-s1-ppc64el-cross all 13.2.0-2cross1 [35.0 kB] Get:41 http://localhost:3142/debian sid/main amd64 libgomp1-ppc64el-cross all 13.2.0-2cross1 [134 kB] Get:42 http://localhost:3142/debian sid/main amd64 libitm1-ppc64el-cross all 13.2.0-2cross1 [28.3 kB] Get:43 http://localhost:3142/debian sid/main amd64 libatomic1-ppc64el-cross all 13.2.0-2cross1 [9476 B] Get:44 http://localhost:3142/debian sid/main amd64 libasan8-ppc64el-cross all 13.2.0-2cross1 [2516 kB] Get:45 http://localhost:3142/debian sid/main amd64 liblsan0-ppc64el-cross all 13.2.0-2cross1 [1113 kB] Get:46 http://localhost:3142/debian sid/main amd64 libtsan2-ppc64el-cross all 13.2.0-2cross1 [2352 kB] Get:47 http://localhost:3142/debian sid/main amd64 libstdc++6-ppc64el-cross all 13.2.0-2cross1 [727 kB] Get:48 http://localhost:3142/debian sid/main amd64 libubsan1-ppc64el-cross all 13.2.0-2cross1 [1022 kB] Get:49 http://localhost:3142/debian sid/main amd64 libquadmath0-ppc64el-cross all 13.2.0-2cross1 [149 kB] Get:50 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-ppc64el-cross all 13.2.0-2cross1 [1374 kB] Get:51 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [18.0 MB] Get:52 http://localhost:3142/debian sid/main amd64 gcc-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1480 B] Get:53 http://localhost:3142/debian sid/main amd64 linux-libc-dev-ppc64el-cross all 6.3.7-1cross1 [1908 kB] Get:54 http://localhost:3142/debian sid/main amd64 libc6-dev-ppc64el-cross all 2.37-3cross1 [1812 kB] Get:55 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-ppc64el-cross all 13.2.0-2cross1 [2287 kB] Get:56 http://localhost:3142/debian sid/main amd64 g++-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [10.1 MB] Get:57 http://localhost:3142/debian sid/main amd64 g++-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1184 B] Get:58 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:59 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:61 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:62 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:64 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:65 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:66 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:67 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:68 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:69 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:71 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:72 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:73 http://localhost:3142/debian sid/main amd64 crossbuild-essential-ppc64el all 12.10 [3492 B] Get:74 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.5 [81.8 kB] Get:75 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:76 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:77 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:78 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:79 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:80 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:81 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:82 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:83 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13 [1300 kB] Get:84 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:85 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:86 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.5 [952 kB] Get:87 http://localhost:3142/debian sid/main ppc64el gcc-11-base ppc64el 11.4.0-2 [39.2 kB] Get:88 http://localhost:3142/debian sid/main ppc64el gcc-13-base ppc64el 13.2.0-2 [39.4 kB] Get:89 http://localhost:3142/debian sid/main ppc64el libgcc-s1 ppc64el 13.2.0-2 [35.0 kB] Get:90 http://localhost:3142/debian sid/main ppc64el libc6 ppc64el 2.37-7 [2681 kB] Get:91 http://localhost:3142/debian sid/main ppc64el libasan6 ppc64el 11.4.0-2 [2039 kB] Get:92 http://localhost:3142/debian sid/main ppc64el libatomic1 ppc64el 13.2.0-2 [9756 B] Get:93 http://localhost:3142/debian sid/main ppc64el libstdc++6 ppc64el 13.2.0-2 [777 kB] Get:94 http://localhost:3142/debian sid/main ppc64el zlib1g ppc64el 1:1.2.13.dfsg-3 [85.6 kB] Get:95 http://localhost:3142/debian sid/main ppc64el libbamtools2.5.2 ppc64el 2.5.2+dfsg-4 [159 kB] Get:96 http://localhost:3142/debian sid/main ppc64el linux-libc-dev ppc64el 6.4.11-1 [1812 kB] Get:97 http://localhost:3142/debian sid/main ppc64el libcrypt1 ppc64el 1:4.4.36-2 [98.0 kB] Get:98 http://localhost:3142/debian sid/main ppc64el libcrypt-dev ppc64el 1:4.4.36-2 [132 kB] Get:99 http://localhost:3142/debian sid/main ppc64el libcom-err2 ppc64el 1.47.0-2 [20.2 kB] Get:100 http://localhost:3142/debian sid/main ppc64el libkrb5support0 ppc64el 1.20.1-3 [35.7 kB] Get:101 http://localhost:3142/debian sid/main ppc64el libk5crypto3 ppc64el 1.20.1-3 [89.9 kB] Get:102 http://localhost:3142/debian sid/main ppc64el libkeyutils1 ppc64el 1.6.3-2 [10.0 kB] Get:103 http://localhost:3142/debian sid/main ppc64el libssl3 ppc64el 3.0.10-1 [2027 kB] Get:104 http://localhost:3142/debian sid/main ppc64el libkrb5-3 ppc64el 1.20.1-3 [364 kB] Get:105 http://localhost:3142/debian sid/main ppc64el libgssapi-krb5-2 ppc64el 1.20.1-3 [148 kB] Get:106 http://localhost:3142/debian sid/main ppc64el libtirpc3 ppc64el 1.3.3+ds-1 [96.7 kB] Get:107 http://localhost:3142/debian sid/main ppc64el libnsl2 ppc64el 1.3.0-2 [44.8 kB] Get:108 http://localhost:3142/debian sid/main ppc64el libtirpc-dev ppc64el 1.3.3+ds-1 [209 kB] Get:109 http://localhost:3142/debian sid/main ppc64el libnsl-dev ppc64el 1.3.0-2 [73.6 kB] Get:110 http://localhost:3142/debian sid/main ppc64el libc6-dev ppc64el 2.37-7 [1816 kB] Get:111 http://localhost:3142/debian sid/main ppc64el zlib1g-dev ppc64el 1:1.2.13.dfsg-3 [916 kB] Get:112 http://localhost:3142/debian sid/main ppc64el libbamtools-dev ppc64el 2.5.2+dfsg-4 [227 kB] Get:113 http://localhost:3142/debian sid/main ppc64el libbrotli1 ppc64el 1.0.9-2+b6 [295 kB] Get:114 http://localhost:3142/debian sid/main ppc64el libbwa-dev ppc64el 0.7.17-7+b3 [175 kB] Get:115 http://localhost:3142/debian sid/main ppc64el libbz2-1.0 ppc64el 1.0.8-5+b1 [51.8 kB] Get:116 http://localhost:3142/debian sid/main ppc64el libgmp10 ppc64el 2:6.3.0+dfsg-2 [571 kB] Get:117 http://localhost:3142/debian sid/main ppc64el libnettle8 ppc64el 3.9.1-2 [318 kB] Get:118 http://localhost:3142/debian sid/main ppc64el libhogweed6 ppc64el 3.9.1-2 [331 kB] Get:119 http://localhost:3142/debian sid/main ppc64el libunistring2 ppc64el 1.0-2 [441 kB] Get:120 http://localhost:3142/debian sid/main ppc64el libidn2-0 ppc64el 2.3.4-1 [146 kB] Get:121 http://localhost:3142/debian sid/main ppc64el libffi8 ppc64el 3.4.4-1 [23.5 kB] Get:122 http://localhost:3142/debian sid/main ppc64el libp11-kit0 ppc64el 0.25.0-4 [397 kB] Get:123 http://localhost:3142/debian sid/main ppc64el libtasn1-6 ppc64el 4.19.0-3 [52.5 kB] Get:124 http://localhost:3142/debian sid/main ppc64el libgnutls30 ppc64el 3.8.1-4 [1382 kB] Get:125 http://localhost:3142/debian sid/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg2-2 [725 kB] Get:126 http://localhost:3142/debian sid/main ppc64el libsasl2-modules-db ppc64el 2.1.28+dfsg1-3 [21.7 kB] Get:127 http://localhost:3142/debian sid/main ppc64el libsasl2-2 ppc64el 2.1.28+dfsg1-3 [65.6 kB] Get:128 http://localhost:3142/debian sid/main ppc64el libldap-2.5-0 ppc64el 2.5.13+dfsg-5 [201 kB] Get:129 http://localhost:3142/debian sid/main ppc64el libnghttp2-14 ppc64el 1.55.1-1 [80.8 kB] Get:130 http://localhost:3142/debian sid/main ppc64el libpsl5 ppc64el 0.21.2-1 [60.5 kB] Get:131 http://localhost:3142/debian sid/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b2 [65.9 kB] Get:132 http://localhost:3142/debian sid/main ppc64el libssh2-1 ppc64el 1.11.0-2 [226 kB] Get:133 http://localhost:3142/debian sid/main ppc64el libzstd1 ppc64el 1.5.5+dfsg2-1 [310 kB] Get:134 http://localhost:3142/debian sid/main ppc64el libcurl3-gnutls ppc64el 8.2.1-1 [404 kB] Get:135 http://localhost:3142/debian sid/main ppc64el libcurl4-gnutls-dev ppc64el 8.2.1-1 [518 kB] Get:136 http://localhost:3142/debian sid/main ppc64el libdeflate0 ppc64el 1.18-1 [41.0 kB] Get:137 http://localhost:3142/debian sid/main ppc64el libdeflate-dev ppc64el 1.18-1 [48.6 kB] Get:138 http://localhost:3142/debian sid/main ppc64el libdisorder0 ppc64el 0.0.2+git20130809.8062ee1-4+b1 [5380 B] Get:139 http://localhost:3142/debian sid/main ppc64el libdisorder-dev ppc64el 0.0.2+git20130809.8062ee1-4+b1 [5192 B] Get:140 http://localhost:3142/debian sid/main ppc64el libfastahack0 ppc64el 1.0.0+dfsg-10 [27.1 kB] Get:141 http://localhost:3142/debian sid/main ppc64el libfastahack-dev ppc64el 1.0.0+dfsg-10 [28.8 kB] Get:142 http://localhost:3142/debian sid/main ppc64el libfml0 ppc64el 0.1+git20190320.b499514-1+b1 [82.0 kB] Get:143 http://localhost:3142/debian sid/main ppc64el libfml-dev ppc64el 0.1+git20190320.b499514-1+b1 [96.1 kB] Get:144 http://localhost:3142/debian sid/main ppc64el libgomp1 ppc64el 13.2.0-2 [136 kB] Get:145 http://localhost:3142/debian sid/main ppc64el libitm1 ppc64el 13.2.0-2 [28.8 kB] Get:146 http://localhost:3142/debian sid/main ppc64el liblsan0 ppc64el 13.2.0-2 [1114 kB] Get:147 http://localhost:3142/debian sid/main ppc64el libtsan0 ppc64el 11.4.0-2 [2021 kB] Get:148 http://localhost:3142/debian sid/main ppc64el libubsan1 ppc64el 13.2.0-2 [1023 kB] Get:149 http://localhost:3142/debian sid/main ppc64el libquadmath0 ppc64el 13.2.0-2 [150 kB] Get:150 http://localhost:3142/debian sid/main ppc64el libgcc-11-dev ppc64el 11.4.0-2 [1269 kB] Get:151 http://localhost:3142/debian sid/main ppc64el libhtscodecs2 ppc64el 1.5.1-1 [79.0 kB] Get:152 http://localhost:3142/debian sid/main ppc64el liblzma5 ppc64el 5.4.1-0.2 [213 kB] Get:153 http://localhost:3142/debian sid/main ppc64el libhts3 ppc64el 1.17+ds-1 [474 kB] Get:154 http://localhost:3142/debian sid/main ppc64el liblzma-dev ppc64el 5.4.1-0.2 [270 kB] Get:155 http://localhost:3142/debian sid/main ppc64el libhts-dev ppc64el 1.17+ds-1 [1658 kB] Get:156 http://localhost:3142/debian sid/main ppc64el libjsoncpp25 ppc64el 1.9.5-6 [80.9 kB] Get:157 http://localhost:3142/debian sid/main ppc64el libjsoncpp-dev ppc64el 1.9.5-6 [24.5 kB] Get:158 http://localhost:3142/debian sid/main ppc64el libtinfo6 ppc64el 6.4+20230625-2 [346 kB] Get:159 http://localhost:3142/debian sid/main ppc64el libncurses6 ppc64el 6.4+20230625-2 [117 kB] Get:160 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-1 [36.1 kB] Get:161 http://localhost:3142/debian sid/main ppc64el libssw0 ppc64el 1.1-14 [19.9 kB] Get:162 http://localhost:3142/debian sid/main ppc64el libseqlib2 ppc64el 1.2.0+dfsg-10 [169 kB] Get:163 http://localhost:3142/debian sid/main ppc64el libssw-dev ppc64el 1.1-14 [23.1 kB] Get:164 http://localhost:3142/debian sid/main ppc64el libseqlib-dev ppc64el 1.2.0+dfsg-10 [227 kB] Get:165 http://localhost:3142/debian sid/main ppc64el libsmithwaterman0 ppc64el 0.0+git20160702.2610e25-12+b1 [37.8 kB] Get:166 http://localhost:3142/debian sid/main ppc64el libsmithwaterman-dev ppc64el 0.0+git20160702.2610e25-12+b1 [43.2 kB] Get:167 http://localhost:3142/debian sid/main ppc64el libstdc++-11-dev ppc64el 11.4.0-2 [2063 kB] Get:168 http://localhost:3142/debian sid/main ppc64el libtabixpp0 ppc64el 1.1.2-1 [9728 B] Get:169 http://localhost:3142/debian sid/main ppc64el libtabixpp-dev ppc64el 1.1.2-1 [9360 B] Get:170 http://localhost:3142/debian sid/main ppc64el libwfa2-0 ppc64el 2.3.3-2 [66.7 kB] Get:171 http://localhost:3142/debian sid/main ppc64el libvcflib2 ppc64el 1.0.9+dfsg1-2 [187 kB] Get:172 http://localhost:3142/debian sid/main ppc64el libwfa2-dev ppc64el 2.3.3-2 [87.0 kB] Get:173 http://localhost:3142/debian sid/main ppc64el libvcflib-dev ppc64el 1.0.9+dfsg1-2 [77.5 kB] Get:174 http://localhost:3142/debian sid/main amd64 ninja-build amd64 1.11.1-1 [136 kB] Get:175 http://localhost:3142/debian sid/main amd64 python3-pkg-resources all 68.0.0-2 [240 kB] Get:176 http://localhost:3142/debian sid/main amd64 python3-lib2to3 all 3.11.4-1 [77.4 kB] Get:177 http://localhost:3142/debian sid/main amd64 python3-distutils all 3.11.4-1 [131 kB] Get:178 http://localhost:3142/debian sid/main amd64 python3-setuptools all 68.0.0-2 [467 kB] Get:179 http://localhost:3142/debian sid/main amd64 meson all 1.2.1-2 [585 kB] Get:180 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-1 [29.5 kB] Get:181 http://localhost:3142/debian sid/main ppc64el pkgconf ppc64el 1.8.1-1 [25.9 kB] Get:182 http://localhost:3142/debian sid/main ppc64el pkg-config ppc64el 1.8.1-1 [13.7 kB] Get:183 http://localhost:3142/debian sid/main ppc64el samtools ppc64el 1.17-1 [654 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 119 MB in 6s (20.1 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14527 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.4-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.4-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.5.0-2_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-2) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.4-1_amd64.deb ... Unpacking python3.11-minimal (3.11.4-1) ... Setting up libpython3.11-minimal:amd64 (3.11.4-1) ... Setting up libexpat1:amd64 (2.5.0-2) ... Setting up python3.11-minimal (3.11.4-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 14857 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.4-5+b1_amd64.deb ... Unpacking python3-minimal (3.11.4-5+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../2-libncursesw6_6.4+20230625-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.4+20230625-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../5-libsqlite3-0_3.42.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.42.0-1) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.4-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.4-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.4-1_amd64.deb ... Unpacking python3.11 (3.11.4-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.11.4-5+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.4-5+b1) ... Setting up python3-minimal (3.11.4-5+b1) ... Selecting previously unselected package python3. (Reading database ... 15308 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.4-5+b1_amd64.deb ... Unpacking python3 (3.11.4-5+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-13_amd64.deb ... Unpacking gettext-base (0.21-13) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../006-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-2_amd64.deb ... Unpacking groff-base (1.23.0-2) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.39.2-1_amd64.deb ... Unpacking bsdextrautils (2.39.2-1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../009-libpipeline1_1.5.7-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.11.2-3_amd64.deb ... Unpacking man-db (2.11.2-3) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.19-3_amd64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../016-autopoint_0.21-13_all.deb ... Unpacking autopoint (0.21-13) ... Selecting previously unselected package bc. Preparing to unpack .../017-bc_1.07.1-3+b1_amd64.deb ... Unpacking bc (1.07.1-3+b1) ... Selecting previously unselected package binutils-powerpc64le-linux-gnu. Preparing to unpack .../018-binutils-powerpc64le-linux-gnu_2.41-4_amd64.deb ... Unpacking binutils-powerpc64le-linux-gnu (2.41-4) ... Selecting previously unselected package gcc-13-powerpc64le-linux-gnu-base:amd64. Preparing to unpack .../019-gcc-13-powerpc64le-linux-gnu-base_13.2.0-2cross1_amd64.deb ... Unpacking gcc-13-powerpc64le-linux-gnu-base:amd64 (13.2.0-2cross1) ... Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. Preparing to unpack .../020-cpp-13-powerpc64le-linux-gnu_13.2.0-2cross1_amd64.deb ... Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Selecting previously unselected package cpp-powerpc64le-linux-gnu. Preparing to unpack .../021-cpp-powerpc64le-linux-gnu_4%3a13.2.0-1_amd64.deb ... Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../022-cross-config_2.6.20_all.deb ... Unpacking cross-config (2.6.20) ... Selecting previously unselected package gcc-13-cross-base. Preparing to unpack .../023-gcc-13-cross-base_13.2.0-2cross1_all.deb ... Unpacking gcc-13-cross-base (13.2.0-2cross1) ... Selecting previously unselected package libc6-ppc64el-cross. Preparing to unpack .../024-libc6-ppc64el-cross_2.37-3cross1_all.deb ... Unpacking libc6-ppc64el-cross (2.37-3cross1) ... Selecting previously unselected package libgcc-s1-ppc64el-cross. Preparing to unpack .../025-libgcc-s1-ppc64el-cross_13.2.0-2cross1_all.deb ... Unpacking libgcc-s1-ppc64el-cross (13.2.0-2cross1) ... 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Selecting previously unselected package libgomp1:ppc64el. Preparing to unpack .../129-libgomp1_13.2.0-2_ppc64el.deb ... Unpacking libgomp1:ppc64el (13.2.0-2) ... Selecting previously unselected package libitm1:ppc64el. Preparing to unpack .../130-libitm1_13.2.0-2_ppc64el.deb ... Unpacking libitm1:ppc64el (13.2.0-2) ... Selecting previously unselected package liblsan0:ppc64el. Preparing to unpack .../131-liblsan0_13.2.0-2_ppc64el.deb ... Unpacking liblsan0:ppc64el (13.2.0-2) ... Selecting previously unselected package libtsan0:ppc64el. Preparing to unpack .../132-libtsan0_11.4.0-2_ppc64el.deb ... Unpacking libtsan0:ppc64el (11.4.0-2) ... Selecting previously unselected package libubsan1:ppc64el. Preparing to unpack .../133-libubsan1_13.2.0-2_ppc64el.deb ... Unpacking libubsan1:ppc64el (13.2.0-2) ... Selecting previously unselected package libquadmath0:ppc64el. Preparing to unpack .../134-libquadmath0_13.2.0-2_ppc64el.deb ... Unpacking libquadmath0:ppc64el (13.2.0-2) ... 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Unpacking libhts-dev:ppc64el (1.17+ds-1) ... Selecting previously unselected package libjsoncpp25:ppc64el. Preparing to unpack .../141-libjsoncpp25_1.9.5-6_ppc64el.deb ... Unpacking libjsoncpp25:ppc64el (1.9.5-6) ... Selecting previously unselected package libjsoncpp-dev:ppc64el. Preparing to unpack .../142-libjsoncpp-dev_1.9.5-6_ppc64el.deb ... Unpacking libjsoncpp-dev:ppc64el (1.9.5-6) ... Selecting previously unselected package libtinfo6:ppc64el. Preparing to unpack .../143-libtinfo6_6.4+20230625-2_ppc64el.deb ... Unpacking libtinfo6:ppc64el (6.4+20230625-2) ... Selecting previously unselected package libncurses6:ppc64el. Preparing to unpack .../144-libncurses6_6.4+20230625-2_ppc64el.deb ... Unpacking libncurses6:ppc64el (6.4+20230625-2) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../145-libpkgconf3_1.8.1-1_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-1) ... Selecting previously unselected package libssw0:ppc64el. 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Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-13) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up gcc-13-powerpc64le-linux-gnu-base:amd64 (13.2.0-2cross1) ... Setting up libyaml-perl (1.30-2) ... Setting up ninja-build (1.11.1-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libpkgconf3:amd64 (1.8.1-1) ... Setting up gcc-13-base:ppc64el (13.2.0-2) ... Setting up gcc-13-cross-base (13.2.0-2cross1) ... Setting up autopoint (0.21-13) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libncursesw6:amd64 (6.4+20230625-2) ... Setting up autoconf (2.71-3) ... Setting up libbwa-dev:ppc64el (0.7.17-7+b3) ... Setting up libitm1-ppc64el-cross (13.2.0-2cross1) ... Setting up libatomic1-ppc64el-cross (13.2.0-2cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (6.3.7-1cross1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libgcc-s1-ppc64el-cross (13.2.0-2cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.41-4) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up libelf1:amd64 (0.189-4) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13) ... Setting up libc6-dev-ppc64el-cross (2.37-3cross1) ... Setting up libtool (2.4.7-7) ... Setting up libquadmath0-ppc64el-cross (13.2.0-2cross1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up bc (1.07.1-3+b1) ... Setting up libasan8-ppc64el-cross (13.2.0-2cross1) ... Setting up libgomp1-ppc64el-cross (13.2.0-2cross1) ... Setting up liblsan0-ppc64el-cross (13.2.0-2cross1) ... Setting up pkgconf:ppc64el (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libtsan2-ppc64el-cross (13.2.0-2cross1) ... Setting up dh-autoreconf (20) ... Setting up pkg-config:ppc64el (1.8.1-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libstdc++6-ppc64el-cross (13.2.0-2cross1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-2) ... Setting up libubsan1-ppc64el-cross (13.2.0-2cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.4-1) ... Setting up man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-ppc64el-cross (13.2.0-2cross1) ... Setting up libpython3-stdlib:amd64 (3.11.4-5+b1) ... Setting up python3.11 (3.11.4-1) ... Setting up libstdc++-13-dev-ppc64el-cross (13.2.0-2cross1) ... Setting up debhelper (13.11.5) ... Setting up python3 (3.11.4-5+b1) ... Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up python3-lib2to3 (3.11.4-1) ... Setting up python3-pkg-resources (68.0.0-2) ... Setting up python3-distutils (3.11.4-1) ... Setting up python3-setuptools (68.0.0-2) ... Setting up meson (1.2.1-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up g++-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-ppc64el (12.10) ... Setting up libgcc-s1:ppc64el (13.2.0-2) ... Setting up libc6:ppc64el (2.37-7) ... Setting up libffi8:ppc64el (3.4.4-1) ... Setting up libtasn1-6:ppc64el (4.19.0-3) ... Setting up libbz2-1.0:ppc64el (1.0.8-5+b1) ... Setting up libdb5.3:ppc64el (5.3.28+dfsg2-2) ... Setting up libstdc++6:ppc64el (13.2.0-2) ... Setting up liblsan0:ppc64el (13.2.0-2) ... Setting up libitm1:ppc64el (13.2.0-2) ... Setting up libtinfo6:ppc64el (6.4+20230625-2) ... Setting up libtsan0:ppc64el (11.4.0-2) ... Setting up libhtscodecs2:ppc64el (1.5.1-1) ... Setting up libdisorder0:ppc64el (0.0.2+git20130809.8062ee1-4+b1) ... Setting up libwfa2-0:ppc64el (2.3.3-2) ... Setting up libzstd1:ppc64el (1.5.5+dfsg2-1) ... Setting up libkeyutils1:ppc64el (1.6.3-2) ... Setting up liblzma5:ppc64el (5.4.1-0.2) ... Setting up libbrotli1:ppc64el (1.0.9-2+b6) ... Setting up libssl3:ppc64el (3.0.10-1) ... Setting up libsmithwaterman0:ppc64el (0.0+git20160702.2610e25-12+b1) ... Setting up libnghttp2-14:ppc64el (1.55.1-1) ... Setting up libunistring2:ppc64el (1.0-2) ... Setting up libdeflate0:ppc64el (1.18-1) ... Setting up libwfa2-dev:ppc64el (2.3.3-2) ... Setting up zlib1g:ppc64el (1:1.2.13.dfsg-3) ... Setting up libcrypt1:ppc64el (1:4.4.36-2) ... Setting up libidn2-0:ppc64el (2.3.4-1) ... Setting up libcom-err2:ppc64el (1.47.0-2) ... Setting up libgomp1:ppc64el (13.2.0-2) ... Setting up libfml0:ppc64el (0.1+git20190320.b499514-1+b1) ... Setting up libfastahack0:ppc64el (1.0.0+dfsg-10) ... Setting up libasan6:ppc64el (11.4.0-2) ... Setting up libkrb5support0:ppc64el (1.20.1-3) ... Setting up libsasl2-modules-db:ppc64el (2.1.28+dfsg1-3) ... Setting up libfastahack-dev:ppc64el (1.0.0+dfsg-10) ... Setting up libnettle8:ppc64el (3.9.1-2) ... Setting up libgmp10:ppc64el (2:6.3.0+dfsg-2) ... Setting up libncurses6:ppc64el (6.4+20230625-2) ... Setting up libquadmath0:ppc64el (13.2.0-2) ... Setting up libp11-kit0:ppc64el (0.25.0-4) ... Setting up libatomic1:ppc64el (13.2.0-2) ... Setting up libjsoncpp25:ppc64el (1.9.5-6) ... Setting up libk5crypto3:ppc64el (1.20.1-3) ... Setting up libdisorder-dev:ppc64el (0.0.2+git20130809.8062ee1-4+b1) ... Setting up libbamtools2.5.2:ppc64el (2.5.2+dfsg-4) ... Setting up libsasl2-2:ppc64el (2.1.28+dfsg1-3) ... Setting up liblzma-dev:ppc64el (5.4.1-0.2) ... Setting up libubsan1:ppc64el (13.2.0-2) ... Setting up libgcc-11-dev:ppc64el (11.4.0-2) ... Setting up libcrypt-dev:ppc64el (1:4.4.36-2) ... Setting up libssh2-1:ppc64el (1.11.0-2) ... Setting up libkrb5-3:ppc64el (1.20.1-3) ... Setting up libdeflate-dev:ppc64el (1.18-1) ... Setting up libssw0:ppc64el (1.1-14) ... Setting up libjsoncpp-dev:ppc64el (1.9.5-6) ... Setting up libpsl5:ppc64el (0.21.2-1) ... Setting up libhogweed6:ppc64el (3.9.1-2) ... Setting up libssw-dev:ppc64el (1.1-14) ... Setting up libgnutls30:ppc64el (3.8.1-4) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:ppc64el (1.20.1-3) ... Setting up libsmithwaterman-dev:ppc64el (0.0+git20160702.2610e25-12+b1) ... Setting up libtirpc3:ppc64el (1.3.3+ds-1) ... Setting up libldap-2.5-0:ppc64el (2.5.13+dfsg-5) ... Setting up libtirpc-dev:ppc64el (1.3.3+ds-1) ... Setting up libnsl2:ppc64el (1.3.0-2) ... Setting up libcurl3-gnutls:ppc64el (8.2.1-1) ... Setting up libcurl4-gnutls-dev:ppc64el (8.2.1-1) ... Setting up libnsl-dev:ppc64el (1.3.0-2) ... Setting up libc6-dev:ppc64el (2.37-7) ... Setting up libhts3:ppc64el (1.17+ds-1) ... Setting up samtools:ppc64el (1.17-1) ... Setting up libstdc++-11-dev:ppc64el (11.4.0-2) ... Setting up zlib1g-dev:ppc64el (1:1.2.13.dfsg-3) ... Setting up libtabixpp0:ppc64el (1.1.2-1) ... Setting up libseqlib2:ppc64el (1.2.0+dfsg-10) ... Setting up libfml-dev:ppc64el (0.1+git20190320.b499514-1+b1) ... Setting up libhts-dev:ppc64el (1.17+ds-1) ... Setting up libseqlib-dev:ppc64el (1.2.0+dfsg-10) ... Setting up libvcflib2:ppc64el (1.0.9+dfsg1-2) ... Setting up libbamtools-dev:ppc64el (2.5.2+dfsg-4) ... Setting up libtabixpp-dev:ppc64el (1.1.2-1) ... Setting up libvcflib-dev:ppc64el (1.0.9+dfsg1-2) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-9-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) amd64 (x86_64) Toolchain package versions: binutils_2.41-4 dpkg-dev_1.21.22 g++-11_11.4.0-2 g++-13_13.2.0-2 gcc-11_11.4.0-2 gcc-13_13.2.0-2 libc6-dev_2.37-7 libstdc++-11-dev_11.4.0-2 libstdc++-13-dev_13.2.0-2 libstdc++-13-dev-ppc64el-cross_13.2.0-2cross1 libstdc++6_13.2.0-2 libstdc++6-ppc64el-cross_13.2.0-2cross1 linux-libc-dev_6.4.11-1 Package versions: adduser_3.137 apt_2.7.3 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b4 bc_1.07.1-3+b1 binutils_2.41-4 binutils-common_2.41-4 binutils-powerpc64le-linux-gnu_2.41-4 binutils-x86-64-linux-gnu_2.41-4 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-11_11.4.0-2 cpp-13_13.2.0-2 cpp-13-powerpc64le-linux-gnu_13.2.0-2cross1 cpp-powerpc64le-linux-gnu_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-ppc64el_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.5 debian-archive-keyring_2023.4 debianutils_5.8-1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.22 dpkg-cross_2.6.20 dpkg-dev_1.21.22 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.44-3 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-2 g++-13_13.2.0-2 g++-13-powerpc64le-linux-gnu_13.2.0-2cross1 g++-powerpc64le-linux-gnu_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-2 gcc-11-base_11.4.0-2 gcc-12-base_12.3.0-7 gcc-13_13.2.0-2 gcc-13-base_13.2.0-2 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: freebayes Binary: freebayes Architecture: any Version: 1.3.7-1 Maintainer: Debian Med Packaging Team Uploaders: Brad Chapman , Andreas Tille Homepage: https://github.com/ekg/freebayes Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/freebayes Vcs-Git: https://salsa.debian.org/med-team/freebayes.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), meson, ninja-build, pkg-config, zlib1g-dev, libbamtools-dev, libvcflib-dev (>= 1.0.9+dfsg-1~), libtabixpp-dev, libseqlib-dev, bc, samtools, parallel , libvcflib-tools , debhelper Package-List: freebayes deb science optional arch=any Checksums-Sha1: aa5e76b874f5daa90102152d542fa30f5bac701f 2901909 freebayes_1.3.7.orig.tar.gz a09e02c045aba29995c62fa6e4abf0ff78ea3766 11812 freebayes_1.3.7-1.debian.tar.xz Checksums-Sha256: 73de20987bfad317099e5bb2f651073351906b9fb1392d704332f401fbfbb5c6 2901909 freebayes_1.3.7.orig.tar.gz 952bcb0e3bb5f6583b3fea22a92c742b1b44e32669462d3b34bbaf819d6a5b56 11812 freebayes_1.3.7-1.debian.tar.xz Files: 83a9eaef72b98e3c03c287ec73c69687 2901909 freebayes_1.3.7.orig.tar.gz 3c6f7bea75fda1cf07ba01381993bde4 11812 freebayes_1.3.7-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmTjVdAACgkQPCZ2P2xn 5uIY3RAAzZaoII+50EQ5LZUGZSNAnPkI7I7TTjJvPcqXp4+Mq4ugFdt1b6vTqucx AhNG9ICJBgPdNYbkpR3XKif6396BlVJprztnuHi4xIwKN3qNZWGOeRz/wRnYl78X 8MVSi4bOHr+/wW9pdrVe5yWQ9Lc66TudfNh176T3CEWVjljQ1nH5lbboab4jp7FN y7peGqhnClyMgXTf8CE8ATph0s+ZdzsTEv2BK+Kqg5wD2R4l8gZoJKiXAH9qwOEr lcOXP5rkz27AosCVvsSvj4Bi8qCf7myH3nbo6dpoIqsSA4ktQ/1IKfnlsd54Qm+i UgfTrMYM0qutY+vFOCnRoG+hyss/c0dWuuE8/Yng97qKRB7JElr3vVMWuSEmDz5F kJe4Ls7l8hzd+2f15fGLXXxcMc10sTc/Cn3tqYmQYi1Llwn4r80XQsSpjlk7RU5S 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PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-cd921696-fee5-4c81-ab15-fb70a4b4f2db SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package freebayes dpkg-buildpackage: info: source version 1.3.7-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --buildsystem=meson --builddir=build dh_auto_clean -O--buildsystem=meson -O--builddir=build dh_autoreconf_clean -O--buildsystem=meson -O--builddir=build dh_clean -O--buildsystem=meson -O--builddir=build debian/rules binary-arch dh binary-arch --buildsystem=meson --builddir=build dh_update_autotools_config -a -O--buildsystem=meson -O--builddir=build dh_autoreconf -a -O--buildsystem=meson -O--builddir=build dh_auto_configure -a -O--buildsystem=meson -O--builddir=build cd build && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/powerpc64le-linux-gnu -Dpython.bytecompile=-1 --cross-file /<>/debian/.debhelper/generated/_source/meson-cross-file.conf DEPRECATION: c_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: c_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. DEPRECATION: cpp_link_args in the [properties] section of the machine file is deprecated, use the [built-in options] section. The Meson build system Version: 1.2.1 Source dir: /<> Build dir: /<>/build Build type: cross build Project name: freebayes Project version: 1.3.6 C compiler for the host machine: /usr/bin/powerpc64le-linux-gnu-gcc (gcc 13.2.0 "powerpc64le-linux-gnu-gcc (Debian 13.2.0-2) 13.2.0") C linker for the host machine: /usr/bin/powerpc64le-linux-gnu-gcc ld.bfd 2.41 C++ compiler for the host machine: /usr/bin/powerpc64le-linux-gnu-g++ (gcc 13.2.0 "powerpc64le-linux-gnu-g++ (Debian 13.2.0-2) 13.2.0") C++ linker for the host machine: /usr/bin/powerpc64le-linux-gnu-g++ ld.bfd 2.41 C compiler for the build machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-2) 13.2.0") C linker for the build machine: cc ld.bfd 2.41 C++ compiler for the build machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-2) 13.2.0") C++ linker for the build machine: c++ ld.bfd 2.41 Build machine cpu family: x86_64 Build machine cpu: x86_64 Host machine cpu family: ppc64 Host machine cpu: ppc64el Target machine cpu family: ppc64 Target machine cpu: ppc64el Found pkg-config: /usr/bin/powerpc64le-linux-gnu-pkg-config (1.8.1) Run-time dependency zlib found: YES 1.2.13 Run-time dependency liblzma found: YES 5.4.1 Run-time dependency threads found: YES Library tabixpp found: YES Run-time dependency htslib found: YES 1.17 Library tabixpp found: YES Run-time dependency libvcflib found: YES 1.0 Run-time dependency libseqlib found: YES 1.0 Compiler for C++ supports arguments -fpermissive: YES Compiler for C++ supports arguments -Wno-reorder: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Program prove found: YES (/usr/bin/prove) Build targets in project: 3 freebayes 1.3.6 User defined options Cross files : /<>/debian/.debhelper/generated/_source/meson-cross-file.conf buildtype : plain libdir : lib/powerpc64le-linux-gnu localstatedir : /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload python.bytecompile: -1 Found ninja-1.11.1 at /usr/bin/ninja dh_auto_build -a -O--buildsystem=meson -O--builddir=build cd build && LC_ALL=C.UTF-8 ninja -j1 -v [1/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Allele.cpp.o -MF libfreebayes_common.a.p/src_Allele.cpp.o.d -o libfreebayes_common.a.p/src_Allele.cpp.o -c ../src/Allele.cpp [2/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_AlleleParser.cpp.o -MF libfreebayes_common.a.p/src_AlleleParser.cpp.o.d -o libfreebayes_common.a.p/src_AlleleParser.cpp.o -c ../src/AlleleParser.cpp In file included from ../src/AlleleParser.h:32, from ../src/AlleleParser.cpp:1: /usr/include/vcflib/Variant.h:650:28: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 650 | struct stringcasecmp : binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/13/string:49, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/13/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/13/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/13/iostream:41, from ../src/AlleleParser.h:4: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/include/vcflib/Variant.h:651:42: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 651 | struct charcasecmp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [3/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_BedReader.cpp.o -MF libfreebayes_common.a.p/src_BedReader.cpp.o.d -o libfreebayes_common.a.p/src_BedReader.cpp.o -c ../src/BedReader.cpp [4/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Bias.cpp.o -MF libfreebayes_common.a.p/src_Bias.cpp.o.d -o libfreebayes_common.a.p/src_Bias.cpp.o -c ../src/Bias.cpp [5/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_CNV.cpp.o -MF libfreebayes_common.a.p/src_CNV.cpp.o.d -o libfreebayes_common.a.p/src_CNV.cpp.o -c ../src/CNV.cpp [6/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Contamination.cpp.o -MF libfreebayes_common.a.p/src_Contamination.cpp.o.d -o libfreebayes_common.a.p/src_Contamination.cpp.o -c ../src/Contamination.cpp [7/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_DataLikelihood.cpp.o -MF libfreebayes_common.a.p/src_DataLikelihood.cpp.o.d -o libfreebayes_common.a.p/src_DataLikelihood.cpp.o -c ../src/DataLikelihood.cpp In file included from ../src/AlleleParser.h:32, from ../src/DataLikelihood.h:20, from ../src/DataLikelihood.cpp:1: /usr/include/vcflib/Variant.h:650:28: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 650 | struct stringcasecmp : binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/13/string:49, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/13/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/13/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/13/iostream:41, from ../src/DataLikelihood.h:4: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/include/vcflib/Variant.h:651:42: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 651 | struct charcasecmp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [8/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Dirichlet.cpp.o -MF libfreebayes_common.a.p/src_Dirichlet.cpp.o.d -o libfreebayes_common.a.p/src_Dirichlet.cpp.o -c ../src/Dirichlet.cpp [9/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Ewens.cpp.o -MF libfreebayes_common.a.p/src_Ewens.cpp.o.d -o libfreebayes_common.a.p/src_Ewens.cpp.o -c ../src/Ewens.cpp [10/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_FBFasta.cpp.o -MF libfreebayes_common.a.p/src_FBFasta.cpp.o.d -o libfreebayes_common.a.p/src_FBFasta.cpp.o -c ../src/FBFasta.cpp ../src/FBFasta.cpp: In member function ‘std::string FB::FastaReference::getRawSequence(std::string)’: ../src/FBFasta.cpp:273:20: warning: pointer ‘pbegin’ used after ‘void free(void*)’ [-Wuse-after-free] 273 | s.resize((pend - pbegin)/sizeof(char)); | ~~~~~^~~~~~~~ ../src/FBFasta.cpp:272:9: note: call to ‘void free(void*)’ here 272 | free(seq); | ~~~~^~~~~ ../src/FBFasta.cpp: In member function ‘std::string FB::FastaReference::getRawSubSequence(std::string, int, int)’: ../src/FBFasta.cpp:316:20: warning: pointer ‘pbegin’ used after ‘void free(void*)’ [-Wuse-after-free] 316 | s.resize((pend - pbegin)/sizeof(char)); | ~~~~~^~~~~~~~ ../src/FBFasta.cpp:315:9: note: call to ‘void free(void*)’ here 315 | free(seq); | ~~~~^~~~~ [11/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Genotype.cpp.o -MF libfreebayes_common.a.p/src_Genotype.cpp.o.d -o libfreebayes_common.a.p/src_Genotype.cpp.o -c ../src/Genotype.cpp [12/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_IndelAllele.cpp.o -MF libfreebayes_common.a.p/src_IndelAllele.cpp.o.d -o libfreebayes_common.a.p/src_IndelAllele.cpp.o -c ../src/IndelAllele.cpp [13/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_LeftAlign.cpp.o -MF libfreebayes_common.a.p/src_LeftAlign.cpp.o.d -o libfreebayes_common.a.p/src_LeftAlign.cpp.o -c ../src/LeftAlign.cpp [14/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Marginals.cpp.o -MF libfreebayes_common.a.p/src_Marginals.cpp.o.d -o libfreebayes_common.a.p/src_Marginals.cpp.o -c ../src/Marginals.cpp In file included from ../src/AlleleParser.h:32, from ../src/ResultData.h:10, from ../src/Marginals.h:7, from ../src/Marginals.cpp:1: /usr/include/vcflib/Variant.h:650:28: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 650 | struct stringcasecmp : binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/13/bits/refwrap.h:39, from /usr/powerpc64le-linux-gnu/include/c++/13/vector:68, from ../src/Marginals.h:4: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/include/vcflib/Variant.h:651:42: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 651 | struct charcasecmp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [15/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Multinomial.cpp.o -MF libfreebayes_common.a.p/src_Multinomial.cpp.o.d -o libfreebayes_common.a.p/src_Multinomial.cpp.o -c ../src/Multinomial.cpp [16/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_NonCall.cpp.o -MF libfreebayes_common.a.p/src_NonCall.cpp.o.d -o libfreebayes_common.a.p/src_NonCall.cpp.o -c ../src/NonCall.cpp [17/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Parameters.cpp.o -MF libfreebayes_common.a.p/src_Parameters.cpp.o.d -o libfreebayes_common.a.p/src_Parameters.cpp.o -c ../src/Parameters.cpp [18/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Result.cpp.o -MF libfreebayes_common.a.p/src_Result.cpp.o.d -o libfreebayes_common.a.p/src_Result.cpp.o -c ../src/Result.cpp [19/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_ResultData.cpp.o -MF libfreebayes_common.a.p/src_ResultData.cpp.o.d -o libfreebayes_common.a.p/src_ResultData.cpp.o -c ../src/ResultData.cpp In file included from ../src/AlleleParser.h:32, from ../src/ResultData.h:10, from ../src/ResultData.cpp:1: /usr/include/vcflib/Variant.h:650:28: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 650 | struct stringcasecmp : binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/13/bits/refwrap.h:39, from /usr/powerpc64le-linux-gnu/include/c++/13/vector:68, from ../src/ResultData.h:4: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/include/vcflib/Variant.h:651:42: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 651 | struct charcasecmp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [20/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Sample.cpp.o -MF libfreebayes_common.a.p/src_Sample.cpp.o.d -o libfreebayes_common.a.p/src_Sample.cpp.o -c ../src/Sample.cpp [21/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_SegfaultHandler.cpp.o -MF libfreebayes_common.a.p/src_SegfaultHandler.cpp.o.d -o libfreebayes_common.a.p/src_SegfaultHandler.cpp.o -c ../src/SegfaultHandler.cpp [22/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ilibfreebayes_common.a.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ libfreebayes_common.a.p/src_Utility.cpp.o -MF libfreebayes_common.a.p/src_Utility.cpp.o.d -o libfreebayes_common.a.p/src_Utility.cpp.o -c ../src/Utility.cpp In file included from ../contrib/ttmath/ttmathint.h:48, from ../contrib/ttmath/ttmathbig.h:46, from ../contrib/ttmath/ttmath.h:58, from ../src/Utility.h:18, from ../src/Utility.cpp:3: In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Exp(const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:326:10, inlined from ‘BigFloat big_exp(long double)’ at ../src/Utility.cpp:363:25: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘x.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[0]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../src/Utility.cpp: In function ‘BigFloat big_exp(long double)’: ../src/Utility.cpp:361:14: note: ‘x’ declared here 361 | BigFloat x, result; | ^ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Exp(const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:326:10, inlined from ‘BigFloat big_exp(long double)’ at ../src/Utility.cpp:363:25: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘x.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[1]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../src/Utility.cpp: In function ‘BigFloat big_exp(long double)’: ../src/Utility.cpp:361:14: note: ‘x’ declared here 361 | BigFloat x, result; | ^ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ttmath::Big ttmath::Big::operator+(const ttmath::Big&) const [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:5570:15, inlined from ‘long double logsumexp_probs(const std::vector&)’ at ../src/Utility.cpp:381:48: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘maxNb.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[0]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../src/Utility.cpp: In function ‘long double logsumexp_probs(const std::vector&)’: ../src/Utility.cpp:380:14: note: ‘maxNb’ declared here 380 | BigFloat maxNb; maxNb.FromDouble(maxN); | ^~~~~ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ttmath::Big ttmath::Big::operator+(const ttmath::Big&) const [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:5570:15, inlined from ‘long double logsumexp_probs(const std::vector&)’ at ../src/Utility.cpp:381:48: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘maxNb.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[1]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../src/Utility.cpp: In function ‘long double logsumexp_probs(const std::vector&)’: ../src/Utility.cpp:380:14: note: ‘maxNb’ declared here 380 | BigFloat maxNb; maxNb.FromDouble(maxN); | ^~~~~ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Log(const ValueType&, const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:311:9, inlined from ‘long double big2phred(const BigFloat&)’ at ../src/Utility.cpp:58:44: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘result.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[0]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../contrib/ttmath/ttmath.h: In function ‘long double big2phred(const BigFloat&)’: ../contrib/ttmath/ttmath.h:288:27: note: ‘result’ declared here 288 | ValueType result; | ^~~~~~ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Log(const ValueType&, const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:311:9, inlined from ‘long double big2phred(const BigFloat&)’ at ../src/Utility.cpp:58:44: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘result.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[1]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../contrib/ttmath/ttmath.h: In function ‘long double big2phred(const BigFloat&)’: ../contrib/ttmath/ttmath.h:288:27: note: ‘result’ declared here 288 | ValueType result; | ^~~~~~ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Log(const ValueType&, const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:311:9, inlined from ‘long double big2phred(const BigFloat&)’ at ../src/Utility.cpp:58:44: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘result.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[0]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../contrib/ttmath/ttmath.h: In function ‘long double big2phred(const BigFloat&)’: ../contrib/ttmath/ttmath.h:288:27: note: ‘result’ declared here 288 | ValueType result; | ^~~~~~ In member function ‘ttmath::UInt& ttmath::UInt::operator=(const ttmath::UInt&) [with unsigned int value_size = 2]’, inlined from ‘ttmath::Big& ttmath::Big::operator=(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3648:12, inlined from ‘ttmath::Big::Big(const ttmath::Big&) [with unsigned int exp = 8; unsigned int man = 2]’ at ../contrib/ttmath/ttmathbig.h:3660:12, inlined from ‘ValueType ttmath::Log(const ValueType&, const ValueType&, ErrorCode*) [with ValueType = Big<8, 2>]’ at ../contrib/ttmath/ttmath.h:311:9, inlined from ‘long double big2phred(const BigFloat&)’ at ../src/Utility.cpp:58:44: ../contrib/ttmath/ttmathuint.h:2740:43: warning: ‘result.ttmath::Big<8, 2>::mantissa.ttmath::UInt<2>::table[1]’ may be used uninitialized [-Wmaybe-uninitialized] 2740 | table[i] = p.table[i]; | ~~~~~~~^ ../contrib/ttmath/ttmath.h: In function ‘long double big2phred(const BigFloat&)’: ../contrib/ttmath/ttmath.h:288:27: note: ‘result’ declared here 288 | ValueType result; | ^~~~~~ [23/27] rm -f libfreebayes_common.a && /usr/bin/powerpc64le-linux-gnu-ar csrDT libfreebayes_common.a libfreebayes_common.a.p/src_Allele.cpp.o libfreebayes_common.a.p/src_AlleleParser.cpp.o libfreebayes_common.a.p/src_BedReader.cpp.o libfreebayes_common.a.p/src_Bias.cpp.o libfreebayes_common.a.p/src_CNV.cpp.o libfreebayes_common.a.p/src_Contamination.cpp.o libfreebayes_common.a.p/src_DataLikelihood.cpp.o libfreebayes_common.a.p/src_Dirichlet.cpp.o libfreebayes_common.a.p/src_Ewens.cpp.o libfreebayes_common.a.p/src_FBFasta.cpp.o libfreebayes_common.a.p/src_Genotype.cpp.o libfreebayes_common.a.p/src_IndelAllele.cpp.o libfreebayes_common.a.p/src_LeftAlign.cpp.o libfreebayes_common.a.p/src_Marginals.cpp.o libfreebayes_common.a.p/src_Multinomial.cpp.o libfreebayes_common.a.p/src_NonCall.cpp.o libfreebayes_common.a.p/src_Parameters.cpp.o libfreebayes_common.a.p/src_Result.cpp.o libfreebayes_common.a.p/src_ResultData.cpp.o libfreebayes_common.a.p/src_Sample.cpp.o libfreebayes_common.a.p/src_SegfaultHandler.cpp.o libfreebayes_common.a.p/src_Utility.cpp.o [24/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ifreebayes.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ freebayes.p/src_freebayes.cpp.o -MF freebayes.p/src_freebayes.cpp.o.d -o freebayes.p/src_freebayes.cpp.o -c ../src/freebayes.cpp In file included from ../src/AlleleParser.h:32, from ../src/freebayes.cpp:29: /usr/include/vcflib/Variant.h:650:28: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 650 | struct stringcasecmp : binary_function { | ^~~~~~~~~~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/c++/13/string:49, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/locale_classes.h:40, from /usr/powerpc64le-linux-gnu/include/c++/13/bits/ios_base.h:41, from /usr/powerpc64le-linux-gnu/include/c++/13/ios:44, from /usr/powerpc64le-linux-gnu/include/c++/13/ostream:40, from /usr/powerpc64le-linux-gnu/include/c++/13/iostream:41, from ../src/freebayes.cpp:9: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /usr/include/vcflib/Variant.h:651:42: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 651 | struct charcasecmp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [25/27] /usr/bin/powerpc64le-linux-gnu-g++ -o freebayes freebayes.p/src_freebayes.cpp.o -Wl,--as-needed -Wl,--no-undefined -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--start-group libfreebayes_common.a /usr/lib/powerpc64le-linux-gnu/libz.so /usr/lib/powerpc64le-linux-gnu/liblzma.so -pthread /usr/lib/powerpc64le-linux-gnu/libhts.so /lib/powerpc64le-linux-gnu/libtabixpp.so /lib/powerpc64le-linux-gnu/libvcflib.so /lib/powerpc64le-linux-gnu/libsmithwaterman.so /lib/powerpc64le-linux-gnu/libdisorder.so /lib/powerpc64le-linux-gnu/libfastahack.so /usr/lib/powerpc64le-linux-gnu/libseqlib.so /usr/lib/libbwa.a -Wl,--end-group [26/27] /usr/bin/powerpc64le-linux-gnu-g++ -Ibamleftalign.p -I. -I.. -I../src -I../contrib/ttmath -I/usr/include/vcflib -I/usr/include/smithwaterman -I/usr/include/fastahack -I/usr/include/SeqLib -I/usr/include/jsoncpp -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c++17 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -fpermissive -Wno-reorder -Wno-sign-compare -Wno-unused-variable -Wno-unused-but-set-variable -MD -MQ bamleftalign.p/src_bamleftalign.cpp.o -MF bamleftalign.p/src_bamleftalign.cpp.o.d -o bamleftalign.p/src_bamleftalign.cpp.o -c ../src/bamleftalign.cpp [27/27] /usr/bin/powerpc64le-linux-gnu-g++ -o bamleftalign bamleftalign.p/src_bamleftalign.cpp.o -Wl,--as-needed -Wl,--no-undefined -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--start-group libfreebayes_common.a /usr/lib/powerpc64le-linux-gnu/libz.so /usr/lib/powerpc64le-linux-gnu/liblzma.so -pthread /usr/lib/powerpc64le-linux-gnu/libhts.so /lib/powerpc64le-linux-gnu/libvcflib.so /lib/powerpc64le-linux-gnu/libsmithwaterman.so /lib/powerpc64le-linux-gnu/libdisorder.so /lib/powerpc64le-linux-gnu/libfastahack.so /usr/lib/powerpc64le-linux-gnu/libseqlib.so /usr/lib/libbwa.a /lib/powerpc64le-linux-gnu/libtabixpp.so -Wl,--end-group create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=meson -O--builddir=build dh_prep -a -O--buildsystem=meson -O--builddir=build dh_auto_install --destdir=debian/freebayes/ -a -O--buildsystem=meson -O--builddir=build cd build && DESTDIR=/<>/debian/freebayes LC_ALL=C.UTF-8 ninja install [0/1] Installing files. Installing freebayes to /<>/debian/freebayes/usr/bin Installing bamleftalign to /<>/debian/freebayes/usr/bin dh_install -a -O--buildsystem=meson -O--builddir=build dh_installdocs -a -O--buildsystem=meson -O--builddir=build dh_installchangelogs -a -O--buildsystem=meson -O--builddir=build dh_installexamples -a -O--buildsystem=meson -O--builddir=build dh_installsystemduser -a -O--buildsystem=meson -O--builddir=build dh_perl -a -O--buildsystem=meson -O--builddir=build dh_link -a -O--buildsystem=meson -O--builddir=build dh_strip_nondeterminism -a -O--buildsystem=meson -O--builddir=build dh_compress -a -O--buildsystem=meson -O--builddir=build dh_fixperms -a -O--buildsystem=meson -O--builddir=build dh_missing -a -O--buildsystem=meson -O--builddir=build dh_dwz -a -O--buildsystem=meson -O--builddir=build dh_strip -a -O--buildsystem=meson -O--builddir=build dh_makeshlibs -a -O--buildsystem=meson -O--builddir=build dh_shlibdeps -a -O--buildsystem=meson -O--builddir=build dh_installdeb -a -O--buildsystem=meson -O--builddir=build dh_gencontrol -a -O--buildsystem=meson -O--builddir=build dpkg-gencontrol: warning: package freebayes: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package freebayes: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a -O--buildsystem=meson -O--builddir=build dh_builddeb -a -O--buildsystem=meson -O--builddir=build dpkg-deb: building package 'freebayes' in '../freebayes_1.3.7-1_ppc64el.deb'. dpkg-deb: building package 'freebayes-dbgsym' in '../freebayes-dbgsym_1.3.7-1_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../freebayes_1.3.7-1_ppc64el.buildinfo dpkg-genchanges --build=any -O../freebayes_1.3.7-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-08-22T09:46:26Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ freebayes_1.3.7-1_ppc64el.changes: ---------------------------------- Format: 1.8 Date: Mon, 21 Aug 2023 13:22:14 +0200 Source: freebayes Binary: freebayes freebayes-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 1.3.7-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: freebayes - Bayesian haplotype-based polymorphism discovery and genotyping Changes: freebayes (1.3.7-1) unstable; urgency=medium . * Team Upload. . [ Andreas Tille ] * Bump versioned Build-Depends: libvcflib-dev (>= 1.0.9+dfsg-1~) * Do not build on i386 on Salsa CI . [ Michael R. Crusoe ] * d/control: applied fix for :unnecessary greater-than versioned dependency * d/copyright: update path for ttmath * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * d/rules: delete any by-products from testing Checksums-Sha1: 01ba7f5a6c43abfe329515c238670f25da8508ed 6421568 freebayes-dbgsym_1.3.7-1_ppc64el.deb 6278627b053d6dd7ef5c57511e6630a1ce6c1a28 7517 freebayes_1.3.7-1_ppc64el.buildinfo cb9e64e57036f9b6fa932b8ef35e426cc9f79022 1499852 freebayes_1.3.7-1_ppc64el.deb Checksums-Sha256: cb6e2bb42c0b45284e375ee75c3d48a0b8fe9de24732db3ae4b6dbcfcd95a23b 6421568 freebayes-dbgsym_1.3.7-1_ppc64el.deb 501a79d3a294f87905b6016fbf935f8c247fb0dbdc618898840ecaa32392e355 7517 freebayes_1.3.7-1_ppc64el.buildinfo 2bf25d3a80ba8714a0cebf937f4477ac78e6420101e609ecf1e0e420a8adb531 1499852 freebayes_1.3.7-1_ppc64el.deb Files: af5b978f1a92a2f7b171294eb9d66f69 6421568 debug optional freebayes-dbgsym_1.3.7-1_ppc64el.deb 0f9c3a4f17b2203aa490aa7020b87e19 7517 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Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 22 Aug 2023 09:46:25 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.1), bash (= 5.2.15-2+b4), bc (= 1.07.1-3+b1), binutils (= 2.41-4), binutils-common (= 2.41-4), binutils-x86-64-linux-gnu (= 2.41-4), bsdextrautils (= 2.39.2-1), bsdutils (= 1:2.39.2-1), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-2), cpp-13 (= 13.2.0-2), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.5), debianutils (= 5.8-1), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.22), dpkg-dev (= 1.21.22), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-2), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-2), gcc-11-base (= 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freebayes Version: 1.3.7-1 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 6490 Depends: freebayes (= 1.3.7-1) Section: debug Priority: optional Description: debug symbols for freebayes Build-Ids: 0bece3f1e1aba512e12c7c4558dbe2a1baaf76d3 7302eea32cf64e4d101fb68601f92257fa64f576 drwxr-xr-x root/root 0 2023-08-21 11:22 ./ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/.build-id/0b/ -rw-r--r-- root/root 595088 2023-08-21 11:22 ./usr/lib/debug/.build-id/0b/ece3f1e1aba512e12c7c4558dbe2a1baaf76d3.debug drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/.build-id/73/ -rw-r--r-- root/root 5742016 2023-08-21 11:22 ./usr/lib/debug/.build-id/73/02eea32cf64e4d101fb68601f92257fa64f576.debug drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 293288 2023-08-21 11:22 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/freebayes.debug drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-08-21 11:22 ./usr/share/doc/freebayes-dbgsym -> freebayes freebayes_1.3.7-1_ppc64el.deb ----------------------------- new Debian package, version 2.0. size 1499852 bytes: control archive=2632 bytes. 865 bytes, 17 lines control 6204 bytes, 74 lines md5sums Package: freebayes Version: 1.3.7-1 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 4234 Depends: libc6 (>= 2.34), libgcc-s1 (>= 4.2), libseqlib2 (>= 1.2.0+dfsg), libstdc++6 (>= 13.1), libtabixpp0 (>= 1.0.0), libvcflib2 (>= 1.0.9+dfsg1), zlib1g (>= 1:1.1.4), python3 Recommends: parallel Section: science Priority: optional Homepage: https://github.com/ekg/freebayes Description: Bayesian haplotype-based polymorphism discovery and genotyping FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment. drwxr-xr-x root/root 0 2023-08-21 11:22 ./ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/bin/ -rwxr-xr-x root/root 1261648 2023-08-21 11:22 ./usr/bin/bamleftalign -rwxr-xr-x root/root 2113400 2023-08-21 11:22 ./usr/bin/freebayes drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/doc/freebayes/ -rw-r--r-- root/root 10293 2023-02-12 03:55 ./usr/share/doc/freebayes/README.md.gz -rw-r--r-- root/root 278 2021-01-28 10:06 ./usr/share/doc/freebayes/README.test -rw-r--r-- root/root 83 2021-01-28 10:06 ./usr/share/doc/freebayes/README.test_data -rw-r--r-- root/root 3576 2023-02-12 03:55 ./usr/share/doc/freebayes/RELEASE-NOTES.md -rw-r--r-- root/root 1774 2023-08-21 11:22 ./usr/share/doc/freebayes/changelog.Debian.gz -rw-r--r-- root/root 3202 2023-08-21 11:21 ./usr/share/doc/freebayes/copyright drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/doc/freebayes/examples/ -rw-r--r-- root/root 83 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/README.test_data drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/bash-tap/ drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/ -rw-r--r-- root/root 246 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/targets.bed -rw-r--r-- root/root 17 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.alt -rw-r--r-- root/root 230 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.bam -rw-r--r-- root/root 96 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.bam.bai -rw-r--r-- root/root 112 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.bed -rw-r--r-- root/root 17 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.ref -rw-r--r-- root/root 15 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.ref.fai -rw-r--r-- root/root 9618 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/data/test.vcf -rw-r--r-- root/root 109 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/freebayes-env.yaml drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/performance/ -rw-r--r-- root/root 1652 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/performance/benchmark.md -rw-r--r-- root/root 906 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/pipeline.sh drwxr-xr-x root/root 0 2023-08-21 11:22 ./usr/share/doc/freebayes/examples/regression/ -rw-r--r-- root/root 94 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/regression/README.md -rw-r--r-- root/root 287 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/runner.sh -rw-r--r-- root/root 2743 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/snakemake-freebayes-parallel.smk drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/splice/ -rw-r--r-- root/root 22589 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam -rw-r--r-- root/root 288 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam.bai -rw-r--r-- root/root 3801 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa -rw-r--r-- root/root 15 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa.fai drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/ -rw-r--r-- root/root 3648 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/00_region_and_target_handling.t -rw-r--r-- root/root 4908 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/01_call_variants.t -rw-r--r-- root/root 2947 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/01b_call_variants.t -rw-r--r-- root/root 2943 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/02_multi_bam.t -rw-r--r-- root/root 1488 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/t/03_reference_bases.t -rw-r--r-- root/root 246 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/targets.bed drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/test-simple-bash/ -rw-r--r-- root/root 17 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.alt -rw-r--r-- root/root 230 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.bam -rw-r--r-- root/root 96 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.bam.bai -rw-r--r-- root/root 112 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.bed -rw-r--r-- root/root 17 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.ref -rw-r--r-- root/root 15 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.ref.fai -rw-r--r-- root/root 550 2021-01-28 10:06 ./usr/share/doc/freebayes/examples/test.vcf drwxr-xr-x root/root 0 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/ -rw-r--r-- root/root 636 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/1read.bam -rw-r--r-- root/root 96 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/1read.bam.bai -rw-r--r-- root/root 287213 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.bam -rw-r--r-- root/root 96 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.bam.bai -rw-r--r-- root/root 155615 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.cram -rw-r--r-- root/root 16307 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.giab.vcf -rw-r--r-- root/root 287228 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.hla.bam -rw-r--r-- root/root 96 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/NA12878.chr22.tiny.hla.bam.bai -rw-r--r-- root/root 12581 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/hla.fa -rw-r--r-- root/root 33 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/hla.fa.fai -rw-r--r-- root/root 2394 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/hla.vcf.gz -rw-r--r-- root/root 120 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/hla.vcf.gz.tbi -rw-r--r-- root/root 12565 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/q with spaces.fa -rw-r--r-- root/root 16 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/q with spaces.fa.fai -rw-r--r-- root/root 36 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/q with spaces.regions -rw-r--r-- root/root 12565 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/q.fa -rw-r--r-- root/root 16 2023-02-12 03:55 ./usr/share/doc/freebayes/examples/tiny/q.fa.fai -rw-r--r-- root/root 36 2023-02-12 03:55 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./usr/share/freebayes/scripts/fasta_generate_regions.py -rwxr-xr-x root/root 1558 2023-02-12 03:55 ./usr/share/freebayes/scripts/freebayes-parallel -rwxr-xr-x root/root 706 2023-02-12 03:55 ./usr/share/freebayes/scripts/generate_freebayes_region_scripts.sh -rw-r--r-- root/root 760 2023-08-21 11:22 ./usr/share/freebayes/scripts/sam_add_rg.pl -rw-r--r-- root/root 371 2023-02-12 03:55 ./usr/share/freebayes/scripts/samples.cnv -rw-r--r-- root/root 6414 2023-02-12 03:55 ./usr/share/freebayes/scripts/split_ref_by_bai_datasize.py -rwxr-xr-x root/root 839 2023-02-12 03:55 ./usr/share/freebayes/scripts/update_version.sh -rwxr-xr-x root/root 315 2023-02-12 03:55 ./usr/share/freebayes/scripts/vcffirstheader lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1502 B] Get:5 copy:/<>/apt_archive ./ Packages [1537 B] Fetched 3654 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 123 newly installed, 0 to remove and 0 not upgraded. Need to get 12.7 MB of archives. After this operation, 49.1 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.10-1 [1415 kB] Get:4 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:5 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:6 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:7 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:8 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:9 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:10 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:11 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:12 http://localhost:3142/debian sid/main amd64 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libhtml-form-perl all 6.11-1 [33.1 kB] Get:65 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:70 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:71 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:72 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:73 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:74 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:75 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:76 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:77 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:78 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:79 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:80 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:81 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:82 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:83 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:86 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:87 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:89 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:92 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:93 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:94 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:96 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:97 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:98 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:99 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:100 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:101 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:102 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:103 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:104 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:105 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:106 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:108 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:109 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:110 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:111 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:115 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:116 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:117 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:118 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:119 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:120 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:121 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:123 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.7 MB in 0s (76.5 MB/s) Selecting previously unselected package netbase. (Reading database ... 22932 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package openssl. Preparing to unpack .../001-openssl_3.0.10-1_amd64.deb ... Unpacking openssl (3.0.10-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../002-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../003-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../004-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../005-gpgconf_2.2.40-1.1_amd64.deb ... Unpacking gpgconf (2.2.40-1.1) ... Selecting previously unselected package gpg. 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Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.57-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-7) ... Processing triggers for man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 103692 Build-Time: 90 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 22 Job: freebayes_1.3.7-1 Lintian: pass Machine Architecture: amd64 Package: freebayes Package-Time: 124 Source-Version: 1.3.7-1 Space: 103692 Status: successful Version: 1.3.7-1 -------------------------------------------------------------------------------- Finished at 2023-08-22T09:46:26Z Build needed 00:02:04, 103692k disk space