sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | fsa 1.15.9+dfsg-5 (arm64) Sat, 14 Nov 2020 06:03:56 +0000 | +==============================================================================+ Package: fsa Version: 1.15.9+dfsg-5 Source Version: 1.15.9+dfsg-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-c838b806-da2a-4639-b1da-f4f108a473ef' with '<>' I: NOTICE: Log filtering will replace 'build/fsa-dzZTTs/resolver-xcZPH5' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-13-0815.47.pdiff [4356 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-13-1413.57.pdiff [13.8 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-13-2012.45.pdiff [10.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-14-0213.35.pdiff [12.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-11-14-0213.35.pdiff [12.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-13-0815.47.pdiff [5994 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-13-1413.57.pdiff [12.2 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-13-2012.45.pdiff [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-14-0213.35.pdiff [15.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-11-14-0213.35.pdiff [15.7 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8367 kB] Fetched 8656 kB in 2s (5404 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'fsa' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fsa.git Please use: git clone https://salsa.debian.org/med-team/fsa.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 574 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main fsa 1.15.9+dfsg-5 (dsc) [1971 B] Get:2 http://debian.oregonstate.edu/debian unstable/main fsa 1.15.9+dfsg-5 (tar) [559 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main fsa 1.15.9+dfsg-5 (diff) [13.4 kB] Fetched 574 kB in 0s (37.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/fsa-dzZTTs/fsa-1.15.9+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/fsa-dzZTTs' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), mummer, exonerate, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), mummer, exonerate, help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [423 B] Get:5 copy:/<>/apt_archive ./ Packages [513 B] Fetched 1893 B in 0s (77.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz exonerate:arm64 file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gawk gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libblkid1:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libglib2.0-0:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libmount1:arm64 libnsl-dev libnsl-dev:arm64 libnsl2:arm64 libnss-nis:arm64 libnss-nisplus:arm64 libpcre2-8-0:arm64 libpcre3:arm64 libperl5.32 libpipeline1 libreadline8 libselinux1:arm64 libsigsegv2 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db mummer:arm64 perl perl-modules-5.32 po-debconf readline-common sensible-utils ucf zlib1g:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring wise:arm64 g++-multilib g++-10-multilib gcc-10-doc gawk-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 glibc-doc manpages-dev:arm64 gnupg git bzr krb5-doc:arm64 krb5-user:arm64 libstdc++-10-doc libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl readline-doc Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libidn2-0:arm64 libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libglib2.0-data:arm64 shared-mime-info:arm64 xdg-user-dirs:arm64 krb5-locales:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils build-essential cpp-10-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz exonerate:arm64 file g++ g++-10 g++-10-aarch64-linux-gnu g++-aarch64-linux-gnu gawk gcc-10-aarch64-linux-gnu gcc-10-aarch64-linux-gnu-base gcc-10-base:arm64 gcc-10-cross-base gcc-9-base:arm64 gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:arm64 libasan6-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libblkid1:arm64 libc6:arm64 libc6-arm64-cross libc6-dev libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libffi7:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-arm64-cross libgcc-9-dev:arm64 libgcc-s1:arm64 libgcc-s1-arm64-cross libglib2.0-0 libglib2.0-0:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libicu67 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libmount1:arm64 libnsl-dev libnsl-dev:arm64 libnsl2:arm64 libnss-nis:arm64 libnss-nisplus:arm64 libpcre2-8-0:arm64 libpcre3:arm64 libperl5.32 libpipeline1 libreadline8 libselinux1:arm64 libsigsegv2 libssl1.1:arm64 libstdc++-10-dev libstdc++-10-dev-arm64-cross libstdc++-9-dev:arm64 libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db mummer:arm64 perl perl-modules-5.32 po-debconf readline-common sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 0 upgraded, 132 newly installed, 0 to remove and 0 not upgraded. Need to get 167 MB of archives. After this operation, 761 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.0-4 [2820 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.0-4 [4118 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.0-4 [292 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.1~rc2-2 [73.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.1~rc2-2 [168 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gawk amd64 1:5.0.1+dfsg-1 [610 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-10-base arm64 10.2.0-17 [200 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.3.0-18 [197 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.35.1-2 [2809 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-4 [2344 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-17 [1738 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-17 [69.1 MB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu-base amd64 10.2.0-9cross1 [199 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [7820 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:10.2.0-1 [16.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.31-1cross2 [1260 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-arm64-cross all 10.2.0-9cross1 [34.5 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 10.2.0-9cross1 [89.6 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 10.2.0-9cross1 [23.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 10.2.0-9cross1 [9240 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-arm64-cross all 10.2.0-9cross1 [298 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 10.2.0-9cross1 [125 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 10.2.0-9cross1 [285 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 10.2.0-9cross1 [411 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 10.2.0-9cross1 [122 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-arm64-cross all 10.2.0-9cross1 [880 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [15.6 MB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:10.2.0-1 [1456 B] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.7.6-1cross2 [1208 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.31-1cross2 [2067 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-arm64-cross all 10.2.0-9cross1 [1678 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-aarch64-linux-gnu amd64 10.2.0-9cross1 [8478 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:10.2.0-1 [1176 B] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.2 [692 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.182-1 [166 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.2-1 [1363 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-s1 arm64 10.2.0-17 [34.6 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt1 arm64 1:4.4.17-1 [89.3 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.45.6-1 [71.6 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.17-10 [64.1 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.17-10 [116 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6.1-2 [15.4 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1h-1 [1384 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.17-10 [349 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.17-10 [149 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main arm64 libtirpc3 arm64 1.2.6-3 [79.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main arm64 libnsl2 arm64 1.3.0-2 [36.9 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main arm64 libnss-nis arm64 3.1-4 [24.0 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main arm64 libnss-nisplus arm64 1.3-4 [20.7 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.31-4 [2454 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main arm64 libffi7 arm64 3.3-5 [20.6 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main arm64 libblkid1 arm64 2.36-3+b2 [187 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main arm64 libpcre2-8-0 arm64 10.34-7 [208 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main arm64 libselinux1 arm64 3.1-2+b1 [84.5 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main arm64 libmount1 arm64 2.36-3+b2 [203 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main arm64 libpcre3 arm64 2:8.39-13 [318 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-2 [87.9 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main arm64 libglib2.0-0 arm64 2.66.2-1 [1277 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main arm64 exonerate arm64 2.4.0-4 [1415 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.16 [181 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.3.0-18 [354 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 10.2.0-17 [9468 B] Get:119 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.9.6-1 [1197 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main arm64 libcrypt-dev arm64 1:4.4.17-1 [109 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main arm64 libtirpc-dev arm64 1.2.6-3 [193 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main arm64 libnsl-dev arm64 1.3.0-2 [66.1 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.31-4 [2022 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 10.2.0-17 [91.5 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 10.2.0-17 [23.8 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 10.2.0-17 [126 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 10.2.0-17 [293 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 10.2.0-17 [450 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 10.2.0-17 [123 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.3.0-18 [884 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.3.0-18 [1661 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 mummer arm64 3.23+dfsg-6 [639 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 167 MB in 2s (98.0 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10514 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-3+b2_amd64.deb ... Unpacking bsdextrautils (2.36-3+b2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../05-perl-modules-5.32_5.32.0-4_all.deb ... Unpacking perl-modules-5.32 (5.32.0-4) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../06-libperl5.32_5.32.0-4_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.0-4) ... Selecting previously unselected package perl. Preparing to unpack .../07-perl_5.32.0-4_amd64.deb ... Unpacking perl (5.32.0-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../08-readline-common_8.1~rc2-2_all.deb ... Unpacking readline-common (8.1~rc2-2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../09-libreadline8_8.1~rc2-2_amd64.deb ... Unpacking libreadline8:amd64 (8.1~rc2-2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../10-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Setting up readline-common (8.1~rc2-2) ... Setting up libreadline8:amd64 (8.1~rc2-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package gawk. (Reading database ... 13056 files and directories currently installed.) Preparing to unpack .../000-gawk_1%3a5.0.1+dfsg-1_amd64.deb ... Unpacking gawk (1:5.0.1+dfsg-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../001-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-10-base:arm64. Preparing to unpack .../002-gcc-10-base_10.2.0-17_arm64.deb ... Unpacking gcc-10-base:arm64 (10.2.0-17) ... Selecting previously unselected package gcc-9-base:arm64. Preparing to unpack .../003-gcc-9-base_9.3.0-18_arm64.deb ... Unpacking gcc-9-base:arm64 (9.3.0-18) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../006-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../009-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. 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Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../030-gcc-10-cross-base_10.2.0-9cross1_all.deb ... Unpacking gcc-10-cross-base (10.2.0-9cross1) ... Selecting previously unselected package libc6-arm64-cross. Preparing to unpack .../031-libc6-arm64-cross_2.31-1cross2_all.deb ... Unpacking libc6-arm64-cross (2.31-1cross2) ... Selecting previously unselected package libgcc-s1-arm64-cross. Preparing to unpack .../032-libgcc-s1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libgcc-s1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libgomp1-arm64-cross. Preparing to unpack .../033-libgomp1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libgomp1-arm64-cross (10.2.0-9cross1) ... Selecting previously unselected package libitm1-arm64-cross. Preparing to unpack .../034-libitm1-arm64-cross_10.2.0-9cross1_all.deb ... Unpacking libitm1-arm64-cross (10.2.0-9cross1) ... 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Preparing to unpack .../061-libfile-homedir-perl_1.006-1_all.deb ... Unpacking libfile-homedir-perl (1.006-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../062-libdebian-dpkgcross-perl_2.6.15-3.1_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3.1) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../063-dpkg-cross_2.6.15-3.1_all.deb ... Unpacking dpkg-cross (2.6.15-3.1) ... Selecting previously unselected package crossbuild-essential-arm64. Preparing to unpack .../064-crossbuild-essential-arm64_12.8_all.deb ... Unpacking crossbuild-essential-arm64 (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../065-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../066-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. 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Selecting previously unselected package dwz. Preparing to unpack .../073-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../074-libglib2.0-0_2.66.2-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.2-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../075-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../076-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../077-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../078-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. 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Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up bsdextrautils (2.36-3+b2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up gawk (1:5.0.1+dfsg-1) ... Setting up libglib2.0-0:amd64 (2.66.2-1) ... No schema files found: doing nothing. Setting up perl-modules-5.32 (5.32.0-4) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:arm64 (5.9.6-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up m4 (1.4.18-4) ... Setting up binutils-aarch64-linux-gnu (2.35.1-2) ... Setting up file (1:5.38-5) ... Setting up gcc-10-base:arm64 (10.2.0-17) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up libc6-arm64-cross (2.31-1cross2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libperl5.32:amd64 (5.32.0-4) ... Setting up gcc-10-cross-base (10.2.0-9cross1) ... Setting up linux-libc-dev-arm64-cross (5.7.6-1cross2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-4) ... Setting up libelf1:amd64 (0.182-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.2) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gcc-9-base:arm64 (9.3.0-18) ... Setting up libgcc-s1-arm64-cross (10.2.0-9cross1) ... Setting up gcc-10-aarch64-linux-gnu-base:amd64 (10.2.0-9cross1) ... Setting up libatomic1-arm64-cross (10.2.0-9cross1) ... Setting up liblsan0-arm64-cross (10.2.0-9cross1) ... Setting up libgomp1-arm64-cross (10.2.0-9cross1) ... Setting up libstdc++-10-dev:amd64 (10.2.0-17) ... Setting up g++-10 (10.2.0-17) ... Setting up libtool (2.4.6-14) ... Setting up libasan6-arm64-cross (10.2.0-9cross1) ... Setting up libtsan0-arm64-cross (10.2.0-9cross1) ... Setting up libc6-dev-arm64-cross (2.31-1cross2) ... Setting up libstdc++6-arm64-cross (10.2.0-9cross1) ... Setting up perl (5.32.0-4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (10.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up cpp-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-arm64-cross (10.2.0-9cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-arm64-cross (10.2.0-9cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.47.16) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-aarch64-linux-gnu (4:10.2.0-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libstdc++-10-dev-arm64-cross (10.2.0-9cross1) ... Setting up gcc-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-10-aarch64-linux-gnu (10.2.0-9cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up gcc-aarch64-linux-gnu (4:10.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:10.2.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libtirpc3:arm64 (1.2.6-3) ... Setting up libcrypt1:arm64 (1:4.4.17-1) ... Setting up libgcc-s1:arm64 (10.2.0-17) ... Setting up libtirpc-dev:arm64 (1.2.6-3) ... Setting up libcrypt-dev:arm64 (1:4.4.17-1) ... Setting up libnsl2:arm64 (1.3.0-2) ... Setting up debhelper (13.2.1) ... Setting up libnss-nisplus:arm64 (1.3-4) ... Setting up dh-autoreconf (19) ... Setting up libnss-nis:arm64 (3.1-4) ... Setting up libc6:arm64 (2.31-4) ... Setting up libnsl-dev:arm64 (1.3.0-2) ... Setting up libc6-dev:arm64 (2.31-4) ... Setting up libblkid1:arm64 (2.36-3+b2) ... Setting up libstdc++6:arm64 (10.2.0-17) ... Setting up liblsan0:arm64 (10.2.0-17) ... Setting up libitm1:arm64 (10.2.0-17) ... Setting up libtsan0:arm64 (10.2.0-17) ... Setting up libkeyutils1:arm64 (1.6.1-2) ... Setting up libssl1.1:arm64 (1.1.1h-1) ... Setting up libffi7:arm64 (3.3-5) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-2) ... Setting up libcom-err2:arm64 (1.45.6-1) ... Setting up libgomp1:arm64 (10.2.0-17) ... Setting up libkrb5support0:arm64 (1.17-10) ... Setting up libasan5:arm64 (9.3.0-18) ... Setting up libpcre3:arm64 (2:8.39-13) ... Setting up libatomic1:arm64 (10.2.0-17) ... Setting up libpcre2-8-0:arm64 (10.34-7) ... Setting up libk5crypto3:arm64 (1.17-10) ... Setting up libubsan1:arm64 (10.2.0-17) ... Setting up mummer:arm64 (3.23+dfsg-6) ... Setting up libkrb5-3:arm64 (1.17-10) ... Setting up libgcc-9-dev:arm64 (9.3.0-18) ... Setting up libselinux1:arm64 (3.1-2+b1) ... Setting up libgssapi-krb5-2:arm64 (1.17-10) ... Setting up libmount1:arm64 (2.36-3+b2) ... Setting up libstdc++-9-dev:arm64 (9.3.0-18) ... Setting up libglib2.0-0:arm64 (2.66.2-1) ... /var/lib/dpkg/info/libglib2.0-0:arm64.postinst: 47: /usr/lib/aarch64-linux-gnu/glib-2.0/glib-compile-schemas: Exec format error /var/lib/dpkg/info/libglib2.0-0:arm64.postinst: 50: /usr/lib/aarch64-linux-gnu/glib-2.0/gio-querymodules: Exec format error Setting up exonerate:arm64 (2.4.0-4) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.31-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-2 dpkg-dev_1.20.5 g++-10_10.2.0-17 gcc-10_10.2.0-17 libc6-dev_2.31-4 libstdc++-10-dev_10.2.0-17 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-17 libstdc++6-arm64-cross_10.2.0-9cross1 linux-libc-dev_5.9.6-1 Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2 binutils-aarch64-linux-gnu_2.35.1-2 binutils-common_2.35.1-2 binutils-x86-64-linux-gnu_2.35.1-2 bsdextrautils_2.36-3+b2 bsdutils_1:2.36-3+b2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-17 cpp-10-aarch64-linux-gnu_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-aarch64-linux-gnu_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-arm64_12.8 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 exonerate_2.4.0-4 fakeroot_1.25.3-1 fdisk_2.36-3+b2 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.0-17 g++-10-aarch64-linux-gnu_10.2.0-9cross1 g++-aarch64-linux-gnu_4:10.2.0-1 gawk_1:5.0.1+dfsg-1 gcc_4:10.2.0-1 gcc-10_10.2.0-17 gcc-10-aarch64-linux-gnu_10.2.0-9cross1 gcc-10-aarch64-linux-gnu-base_10.2.0-9cross1 gcc-10-base_10.2.0-17 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-aarch64-linux-gnu_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan5_9.3.0-18 libasan6_10.2.0-17 libasan6-arm64-cross_10.2.0-9cross1 libatomic1_10.2.0-17 libatomic1-arm64-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2 libblkid1_2.36-3+b2 libbz2-1.0_1.0.8-4 libc-bin_2.31-4 libc-dev-bin_2.31-4 libc6_2.31-4 libc6-arm64-cross_2.31-1cross2 libc6-dev_2.31-4 libc6-dev-arm64-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-17 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2 libctf0_2.35.1-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdpkg-perl_1.20.5 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3+b2 libffi6_3.2.1-9 libffi7_3.3-5 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-17 libgcc-10-dev-arm64-cross_10.2.0-9cross1 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-17 libgcc-s1-arm64-cross_10.2.0-9cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.2-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-17 libgomp1-arm64-cross_10.2.0-9cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-3 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-17 libitm1-arm64-cross_10.2.0-9cross1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.0-17 liblsan0-arm64-cross_10.2.0-9cross1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3+b2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncursesw6_6.2+20200918-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.0-4 libpipeline1_1.5.3-1 libquadmath0_10.2.0-17 libreadline8_8.1~rc2-2 libseccomp2_2.5.0-3 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3+b2 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-17 libstdc++-10-dev-arm64-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-17 libstdc++6-arm64-cross_10.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_246.6-2 libtasn1-6_4.16.0-2 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.0-17 libtsan0-arm64-cross_10.2.0-9cross1 libubsan1_10.2.0-17 libubsan1-arm64-cross_10.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_246.6-2 libunistring2_0.9.10-4 libuuid1_2.36-3+b2 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.2 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.9.6-1 linux-libc-dev-arm64-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3+b2 mummer_3.23+dfsg-6 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-4 perl-base_5.32.0-4 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.0-4 po-debconf_1.0.21 readline-common_8.1~rc2-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 ucf_3.0043 util-linux_2.36-3+b2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: fsa Binary: fsa Architecture: any Version: 1.15.9+dfsg-5 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://fsa.sourceforge.net/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/fsa Vcs-Git: https://salsa.debian.org/med-team/fsa.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), mummer, exonerate, help2man Package-List: fsa deb science optional arch=any Checksums-Sha1: bff4c2f27d54db9891d70e2e314bafecf801cabb 558688 fsa_1.15.9+dfsg.orig.tar.xz 88288b7577b3e02f4a170d297ad9a2f553d5da37 13420 fsa_1.15.9+dfsg-5.debian.tar.xz Checksums-Sha256: c3a845122e08f5e3c0fb96ef5133270a386c4ac6198856fc56aa2a796c0a6377 558688 fsa_1.15.9+dfsg.orig.tar.xz e8b738be8f6a841fed4216f826546b03b652a21e2de3d2c80eb944c292b30d03 13420 fsa_1.15.9+dfsg-5.debian.tar.xz Files: 8d6b1b18195dc5262113b1d363de88bf 558688 fsa_1.15.9+dfsg.orig.tar.xz 1ab239e8f0c538e6a910ef880d2dac4c 13420 fsa_1.15.9+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl+tYAkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGE7w/7BmuGLmmIZx6wckJXLg63TbkirZxeGwON qOKiowPvaLaqJ3Idbunq1cSQp7ZUqQNtaPbzD8+8X0W9lxDiESnXRfItJH7xPNok uzvrIsVctBbs3puwWm9TgpuCwbnps/6Cfb0fqD+4WC7zYyBCmuoFgR08kICTjoDY EmLORLthFlyaal1cHNca1VJjQI2n3FZ6uZulisuFHGHKvUipfcM6CfTIsZjCuVwz ykwARUjLKJrL+f3DtwP3+UxMw4TouE8okJiv1TNNAguLi7h2uKLumTnRmU/QO7pq 7j+/drG7FC3liddFpSEcHpnmtGJCCu0x0QnerknQebBll4NMMUnfkWvrzbc03eWJ zYuHk/iyMUo3JnzigrQdc9anTxadKq0ugPV6O0mVWYv9R5ZWJzxyGCIS7eB9pgNN uqjO8T3JOHGvt/vOSi1cDc0pTVHE3dxn34JC68IJ3fApjn7ZZ0EyJ1aI3UvwsocM MZVifVU7cnTlkJ2gQTqDazRuZCGlR1FJ49ke/JO5/9W4fHNiH1rkh1ymxNsn/QSz IDKa2HT416oK955tTSbDydV0umVWKk18NIVOeaPu8WmgtVCKwgToHVbWbPwO0/g1 Qsz+JBfsSndf1g7HJnn0wJ93ufzsH+NqUTP7v8IzqiUJSTQjLUU8PVGEsbj/+NW2 085V36sn4/A= =FyJZ -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.ZnNIKDwp/trustedkeys.kbx': General error gpgv: Signature made Thu Nov 12 16:17:13 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./fsa_1.15.9+dfsg-5.dsc dpkg-source: info: extracting fsa in /<> dpkg-source: info: unpacking fsa_1.15.9+dfsg.orig.tar.xz dpkg-source: info: unpacking fsa_1.15.9+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no-display.patch dpkg-source: info: applying removed-pdf-only-docs.patch dpkg-source: info: applying privacy_breach_logo.patch dpkg-source: info: applying fixed-check-for-m64-flag.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-c838b806-da2a-4639-b1da-f4f108a473ef SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package fsa dpkg-buildpackage: info: source version 1.15.9+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean # found automatically: --with-mummer=/usr/bin/mummer --with-exonerate=/usr/bin/exonerate debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.arm64 Reading Cross Config Cache (/etc/dpkg-cross/cross-config.arm64) Reading /etc/dpkg-cross/cross-config.cache checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether UID '1003' is supported by ustar format... yes checking whether GID '1003' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether make supports the include directive... yes (GNU style) checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to accept ISO C89... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of aarch64-linux-gnu-gcc... none checking for aarch64-linux-gnu-ar... aarch64-linux-gnu-ar checking the archiver (aarch64-linux-gnu-ar) interface... ar checking for aarch64-linux-gnu-gcc... (cached) aarch64-linux-gnu-gcc checking whether we are using the GNU C compiler... (cached) yes checking whether aarch64-linux-gnu-gcc accepts -g... (cached) yes checking for aarch64-linux-gnu-gcc option to accept ISO C89... (cached) none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... (cached) yes checking dependency style of aarch64-linux-gnu-gcc... (cached) none checking for aarch64-linux-gnu-g++... aarch64-linux-gnu-g++ checking whether we are using the GNU C++ compiler... yes checking whether aarch64-linux-gnu-g++ accepts -g... yes checking dependency style of aarch64-linux-gnu-g++... none checking for gawk... (cached) gawk checking whether make sets $(MAKE)... (cached) yes checking for aarch64-linux-gnu-ranlib... aarch64-linux-gnu-ranlib checking how to run the C++ preprocessor... aarch64-linux-gnu-g++ -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for stdbool.h that conforms to C99... no checking for _Bool... no checking for inline... inline checking for pid_t... yes checking for size_t... yes checking for unsigned long long int... yes checking for uintmax_t... yes checking for ptrdiff_t... yes checking tr1/unordered_map usability... yes checking tr1/unordered_map presence... yes checking for tr1/unordered_map... yes checking tr1/unordered_set usability... yes checking tr1/unordered_set presence... yes checking for tr1/unordered_set... yes checking vfork.h usability... no checking vfork.h presence... no checking for vfork.h... no checking for fork... yes checking for vfork... yes checking for working fork... cross configure: WARNING: result yes guessed because of cross compilation checking for working vfork... (cached) yes checking for floor... yes checking for memmove... yes checking for pow... yes checking for regcomp... yes checking for sqrt... yes checking for strchr... yes checking for strcspn... yes checking for strspn... yes checking for strstr... yes checking build system type... x86_64-pc-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking if gcc accepts -m64... no checking for mummer... /usr/bin/mummer checking for exonerate... /usr/bin/exonerate checking for struct sysinfo.totalram... yes checking for struct sysinfo.mem_unit... yes checking whether sysctl is declared... yes checking whether CTL_HW is declared... no checking whether HW_PHYSMEM is declared... no checking for javac... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/main/Makefile config.status: creating src/manager/Makefile config.status: creating src/fsa/Makefile config.status: creating src/annealing/Makefile config.status: creating src/math/Makefile config.status: creating src/util/Makefile config.status: creating src/seq/Makefile config.status: creating perl/Makefile config.status: creating examples/Makefile config.status: creating html/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands -- FSA 1.15.9 Configuration Results -- C++ compiler: aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG GCC version: aarch64-linux-gnu-gcc (Debian 10.2.0-9) 10.2.0 Host System type: aarch64-unknown-linux-gnu Install prefix: /usr See config.h for further configuration information. Email with questions and bug reports. dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src/util make[3]: Entering directory '/<>/src/util' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o dexception.o dexception.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o logfile.o logfile.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o memcheck.o memcheck.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o misc.o misc.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o opts_list.o opts_list.cc opts_list.cc:99:25: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 99 | SET_VERSION_INFO(*this); | ^ In file included from opts_list.cc:2: ../../src/util/opts_list.h:146:153: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 146 | #define SET_VERSION_INFO(OPTS) (OPTS).version_info.clear(); (OPTS).version_info << PACKAGE_STRING << " (" << DART_DEBUG_MODE_STRING << ") compiled " << __DATE__ << " " << __TIME__ << "\n"; | ^~~~~~~~ opts_list.cc:99:3: note: in expansion of macro ‘SET_VERSION_INFO’ 99 | SET_VERSION_INFO(*this); | ^~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o regexp.o regexp.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o sstring.o sstring.cc rm -f libutil.a aarch64-linux-gnu-ar cru libutil.a dexception.o logfile.o memcheck.o misc.o opts_list.o regexp.o sstring.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libutil.a make[3]: Leaving directory '/<>/src/util' Making all in src/math make[3]: Entering directory '/<>/src/math' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o mathematics.o mathematics.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o mst.o mst.cc rm -f libmath.a aarch64-linux-gnu-ar cru libmath.a mathematics.o mst.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libmath.a make[3]: Leaving directory '/<>/src/math' Making all in src/seq make[3]: Entering directory '/<>/src/seq' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o alphabet.o alphabet.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o alignment.o alignment.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o gff.o gff.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o mercator.o mercator.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o sequence.o sequence.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o similarity_matrix.o similarity_matrix.cc rm -f libseq.a aarch64-linux-gnu-ar cru libseq.a alphabet.o alignment.o gff.o mercator.o sequence.o similarity_matrix.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libseq.a make[3]: Leaving directory '/<>/src/seq' Making all in src/manager make[3]: Entering directory '/<>/src/manager' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o manager.o manager.cc In file included from ../../src/manager/manager.h:12, from manager.cc:6: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o mw_adapter.o mw_adapter.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o db_adapter.o db_adapter.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o db_misc.o db_misc.cc In file included from ../../src/fsa/anchors.h:17, from ../../src/fsa/fsa.h:71, from db_misc.cc:7: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ rm -f libmanager.a aarch64-linux-gnu-ar cru libmanager.a manager.o mw_adapter.o db_adapter.o db_misc.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libmanager.a make[3]: Leaving directory '/<>/src/manager' Making all in src/fsa make[3]: Entering directory '/<>/src/fsa' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o algebras.o algebras.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o aminoacid_indel2dp.o aminoacid_indel2dp.cc aminoacid_indel2dp.cc: In function ‘Algebra Forward(AminoAcidIndel2AlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: aminoacid_indel2dp.cc:768:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 768 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoacid_indel2dp.cc: In function ‘Algebra Backward(AminoAcidIndel2AlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: aminoacid_indel2dp.cc:1320:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1320 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoacid_indel2dp.cc: In function ‘Algebra ForwardBanding(AminoAcidIndel2AlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: aminoacid_indel2dp.cc:1568:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1568 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoacid_indel2dp.cc: In function ‘Algebra BackwardBanding(AminoAcidIndel2AlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: aminoacid_indel2dp.cc:2189:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 2189 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o aminoaciddp.o aminoaciddp.cc aminoaciddp.cc: In function ‘Algebra Forward(AminoAcidAlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: aminoaciddp.cc:768:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 768 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoaciddp.cc: In function ‘Algebra Backward(AminoAcidAlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: aminoaciddp.cc:1230:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1230 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoaciddp.cc: In function ‘Algebra ForwardBanding(AminoAcidAlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: aminoaciddp.cc:1448:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1448 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aminoaciddp.cc: In function ‘Algebra BackwardBanding(AminoAcidAlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: aminoaciddp.cc:1979:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1979 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o anchors.o anchors.cc In file included from ../../src/fsa/anchors.h:17, from anchors.cc:16: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ anchors.cc: In member function ‘fsa::Anchors fsa::Exonerate_adapter::call_exonerate(const string&, const string&, int) const’: anchors.cc:863:13: warning: ignoring return value of ‘FILE* freopen(const char*, const char*, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 863 | freopen (output_file.c_str(), "w", stdout); // capture stdout (send to file output_file) to store exonerate results | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ anchors.cc:864:13: warning: ignoring return value of ‘FILE* freopen(const char*, const char*, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 864 | freopen ("/dev/null", "a", stderr); // capture stderr (send to trash) so that it doesn't mess up our logging | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ anchors.cc: In member function ‘fsa::Anchors fsa::Mummer_adapter::call_mummer(const string&, const string&, size_t) const’: anchors.cc:1100:13: warning: ignoring return value of ‘FILE* freopen(const char*, const char*, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1100 | freopen (output_file.c_str(), "w", stdout); // capture stdout (send to file output_file) to store mummer results | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ anchors.cc:1101:13: warning: ignoring return value of ‘FILE* freopen(const char*, const char*, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1101 | freopen ("/dev/null", "a", stderr); // capture stderr (send to trash) so that it doesn't mess up our logging | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o constraints.o constraints.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o fsa.o fsa.cc fsa.cc:25:125: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 25 | INIT_CONSTRUCTED_OPTS_LIST (opts, -1, "[options] ", "Distance-based alignment of DNA, RNA and proteins."); | ^ In file included from ../../src/fsa/fsa.h:66, from fsa.cc:11: ../../src/util/opts_list.h:146:153: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 146 | #define SET_VERSION_INFO(OPTS) (OPTS).version_info.clear(); (OPTS).version_info << PACKAGE_STRING << " (" << DART_DEBUG_MODE_STRING << ") compiled " << __DATE__ << " " << __TIME__ << "\n"; | ^~~~~~~~ ../../src/util/opts_list.h:152:153: note: in expansion of macro ‘SET_VERSION_INFO’ 152 | #define INIT_CONSTRUCTED_OPTS_LIST(OPTS,ARGS,SYNTAX,SHORTDESC) OPTS.short_description = (SHORTDESC); OPTS.syntax = (SYNTAX); OPTS.expect_args = (ARGS); SET_VERSION_INFO(OPTS); Log_stream::add_opts(OPTS); | ^~~~~~~~~~~~~~~~ fsa.cc:25:3: note: in expansion of macro ‘INIT_CONSTRUCTED_OPTS_LIST’ 25 | INIT_CONSTRUCTED_OPTS_LIST (opts, -1, "[options] ", "Distance-based alignment of DNA, RNA and proteins."); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ../../src/fsa/anchors.h:17, from ../../src/fsa/fsa.h:71, from fsa.cc:11: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o model.o model.cc In file included from ../../src/fsa/model.h:32, from model.cc:8: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o nucleotide_indel2dp.o nucleotide_indel2dp.cc nucleotide_indel2dp.cc: In function ‘Algebra Forward(NucleotideIndel2AlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: nucleotide_indel2dp.cc:768:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 768 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotide_indel2dp.cc: In function ‘Algebra Backward(NucleotideIndel2AlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: nucleotide_indel2dp.cc:1256:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1256 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotide_indel2dp.cc: In function ‘Algebra ForwardBanding(NucleotideIndel2AlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: nucleotide_indel2dp.cc:1472:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1472 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotide_indel2dp.cc: In function ‘Algebra BackwardBanding(NucleotideIndel2AlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: nucleotide_indel2dp.cc:2029:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 2029 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o nucleotidedp.o nucleotidedp.cc nucleotidedp.cc: In function ‘Algebra Forward(NucleotideAlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: nucleotidedp.cc:768:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 768 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotidedp.cc: In function ‘Algebra Backward(NucleotideAlignDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&)’: nucleotidedp.cc:1166:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1166 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotidedp.cc: In function ‘Algebra ForwardBanding(NucleotideAlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: nucleotidedp.cc:1352:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1352 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ nucleotidedp.cc: In function ‘Algebra BackwardBanding(NucleotideAlignWithBandingDPTable**, const string&, const string&, const std::vector&, const std::vector >&, const std::vector >&, int)’: nucleotidedp.cc:1819:9: warning: variable ‘iPrevSlowCoord’ set but not used [-Wunused-but-set-variable] 1819 | int iPrevSlowCoord; | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wno-deprecated -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o sequence_pair_selector.o sequence_pair_selector.cc rm -f libfsa.a aarch64-linux-gnu-ar cru libfsa.a algebras.o aminoacid_indel2dp.o aminoaciddp.o anchors.o constraints.o fsa.o model.o nucleotide_indel2dp.o nucleotidedp.o sequence_pair_selector.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libfsa.a make[3]: Leaving directory '/<>/src/fsa' Making all in src/annealing make[3]: Entering directory '/<>/src/annealing' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o alignment_DAG.o alignment_DAG.cc In file included from ../../src/annealing/alignment_DAG.h:58, from alignment_DAG.cc:12: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o dotplot.o dotplot.cc aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o tree_weights.o tree_weights.cc rm -f libannealing.a aarch64-linux-gnu-ar cru libannealing.a alignment_DAG.o dotplot.o tree_weights.o aarch64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') aarch64-linux-gnu-ranlib libannealing.a make[3]: Leaving directory '/<>/src/annealing' Making all in src/main make[3]: Entering directory '/<>/src/main' aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o main.o main.cc In file included from /usr/aarch64-linux-gnu/include/c++/10/ext/hash_map:60, from ../../src/fsa/dptables.h:43, from ../../src/fsa/mybanding.h:25, from ../../src/fsa/model.h:24, from ../../src/fsa/anchors.h:20, from ../../src/fsa/fsa.h:71, from main.cc:8: /usr/aarch64-linux-gnu/include/c++/10/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp] 32 | #warning \ | ^~~~~~~ In file included from ../../src/fsa/anchors.h:17, from ../../src/fsa/fsa.h:71, from main.cc:8: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o fsa main.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o gapcleaner.o gapcleaner.cc In file included from ../../src/annealing/alignment_DAG.h:58, from gapcleaner.cc:11: ../../src/annealing/SparseMatrix.h: In constructor ‘fsa::SparseMatrix::SparseMatrix(size_t, size_t, size_t, size_t, const Post_probs&)’: ../../src/annealing/SparseMatrix.h:241:11: warning: variable ‘yprev’ set but not used [-Wunused-but-set-variable] 241 | int yprev = -1; // the previous y-coordinate | ^~~~~ aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o gapcleaner gapcleaner.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o isect_mercator_alignment_gff.o isect_mercator_alignment_gff.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o isect_mercator_alignment_gff isect_mercator_alignment_gff.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o map_coords.o map_coords.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o map_coords map_coords.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o map_gff_coords.o map_gff_coords.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o map_gff_coords map_gff_coords.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o percentid.o percentid.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o percentid percentid.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o prot2codon.o prot2codon.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o prot2codon prot2codon.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o slice_fasta.o slice_fasta.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o slice_fasta slice_fasta.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o slice_fasta_gff.o slice_fasta_gff.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o slice_fasta_gff slice_fasta_gff.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o slice_mercator_alignment.o slice_mercator_alignment.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o slice_mercator_alignment slice_mercator_alignment.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a aarch64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -c -o translate.o translate.cc aarch64-linux-gnu-g++ -Wall -Wno-tautological-compare -D_FILE_OFFSET_BITS=64 -O3 -ffast-math -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DNDEBUG -Wl,-z,relro -Wl,-z,now -o translate translate.o ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/fsa/libfsa.a ../../src/annealing/libannealing.a ../../src/manager/libmanager.a ../../src/seq/libseq.a ../../src/util/libutil.a ../../src/math/libmath.a make[3]: Leaving directory '/<>/src/main' Making all in perl make[3]: Entering directory '/<>/perl' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/perl' Making all in examples make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/examples' Making all in html make[3]: Entering directory '/<>/html' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/html' Making all in tests make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/fsa-1.15.9\+dfsg/debian/fsa AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src/util make[2]: Entering directory '/<>/src/util' make[3]: Entering directory '/<>/src/util' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/util' make[2]: Leaving directory '/<>/src/util' Making install in src/math make[2]: Entering directory '/<>/src/math' make[3]: Entering directory '/<>/src/math' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/math' make[2]: Leaving directory '/<>/src/math' Making install in src/seq make[2]: Entering directory '/<>/src/seq' make[3]: Entering directory '/<>/src/seq' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/seq' make[2]: Leaving directory '/<>/src/seq' Making install in src/manager make[2]: Entering directory '/<>/src/manager' make[3]: Entering directory '/<>/src/manager' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/manager' make[2]: Leaving directory '/<>/src/manager' Making install in src/fsa make[2]: Entering directory '/<>/src/fsa' make[3]: Entering directory '/<>/src/fsa' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/fsa' make[2]: Leaving directory '/<>/src/fsa' Making install in src/annealing make[2]: Entering directory '/<>/src/annealing' make[3]: Entering directory '/<>/src/annealing' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/annealing' make[2]: Leaving directory '/<>/src/annealing' Making install in src/main make[2]: Entering directory '/<>/src/main' make[3]: Entering directory '/<>/src/main' /bin/mkdir -p '/<>/debian/fsa/usr/bin' /usr/bin/install -c fsa gapcleaner isect_mercator_alignment_gff map_coords map_gff_coords percentid prot2codon slice_fasta slice_fasta_gff slice_mercator_alignment translate '/<>/debian/fsa/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src/main' make[2]: Leaving directory '/<>/src/main' Making install in perl make[2]: Entering directory '/<>/perl' make[3]: Entering directory '/<>/perl' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/perl' make[2]: Leaving directory '/<>/perl' Making install in examples make[2]: Entering directory '/<>/examples' make[3]: Entering directory '/<>/examples' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/examples' make[2]: Leaving directory '/<>/examples' Making install in html make[2]: Entering directory '/<>/html' make[3]: Entering directory '/<>/html' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/html' make[2]: Leaving directory '/<>/html' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install mv /<>/debian/fsa/usr/bin/translate /<>/debian/fsa/usr/bin/fsa-translate make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'fsa' in '../fsa_1.15.9+dfsg-5_arm64.deb'. dpkg-deb: building package 'fsa-dbgsym' in '../fsa-dbgsym_1.15.9+dfsg-5_arm64.deb'. # found automatically: --with-mummer=/usr/bin/mummer --with-exonerate=/usr/bin/exonerate dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../fsa_1.15.9+dfsg-5_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-11-14T06:07:29Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ fsa_1.15.9+dfsg-5_arm64.changes: -------------------------------- Format: 1.8 Date: Thu, 12 Nov 2020 16:57:16 +0100 Source: fsa Binary: fsa fsa-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.15.9+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fsa - Fast Statistical Alignment of protein, RNA or DNA sequences Closes: 974557 Changes: fsa (1.15.9+dfsg-5) unstable; urgency=medium . * Ignore test that times out on i386 on this architecture Closes: #974557 * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 13 (routine-update) * Secure URI in copyright format (routine-update) * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * watch file standard 4 (routine-update) Checksums-Sha1: c9756891cea408ee7004ff36ad8f97571ca727ec 14317132 fsa-dbgsym_1.15.9+dfsg-5_arm64.deb b397687cec75b3a22293d897dd146ec796d29897 5173 fsa_1.15.9+dfsg-5_arm64.buildinfo 95c2f90c286b754a814837ccd686a781c428b797 598432 fsa_1.15.9+dfsg-5_arm64.deb Checksums-Sha256: d1935112fd19a72c0e7b0c2f2b8983910e13ed9995e1ff107f7f653f5a427f13 14317132 fsa-dbgsym_1.15.9+dfsg-5_arm64.deb 23958bf6e32c99f0a4a10ab67f142b9b46277353308e54cfe226d8d2fb5130c1 5173 fsa_1.15.9+dfsg-5_arm64.buildinfo b67e95f2e4d30dbb67bf3ac99d6b136641ada82c8fd68c1bd4e76431fbe62dcc 598432 fsa_1.15.9+dfsg-5_arm64.deb Files: e686dd3ee42afe679eb19ef2e632d8d4 14317132 debug optional fsa-dbgsym_1.15.9+dfsg-5_arm64.deb f7cc4b20a87aaab43e699a1d0811339a 5173 science optional fsa_1.15.9+dfsg-5_arm64.buildinfo 2078e7870c704f3a9f85a8905dc059e5 598432 science optional fsa_1.15.9+dfsg-5_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: fsa Binary: fsa fsa-dbgsym Architecture: arm64 Version: 1.15.9+dfsg-5 Checksums-Md5: e686dd3ee42afe679eb19ef2e632d8d4 14317132 fsa-dbgsym_1.15.9+dfsg-5_arm64.deb 2078e7870c704f3a9f85a8905dc059e5 598432 fsa_1.15.9+dfsg-5_arm64.deb Checksums-Sha1: c9756891cea408ee7004ff36ad8f97571ca727ec 14317132 fsa-dbgsym_1.15.9+dfsg-5_arm64.deb 95c2f90c286b754a814837ccd686a781c428b797 598432 fsa_1.15.9+dfsg-5_arm64.deb Checksums-Sha256: d1935112fd19a72c0e7b0c2f2b8983910e13ed9995e1ff107f7f653f5a427f13 14317132 fsa-dbgsym_1.15.9+dfsg-5_arm64.deb b67e95f2e4d30dbb67bf3ac99d6b136641ada82c8fd68c1bd4e76431fbe62dcc 598432 fsa_1.15.9+dfsg-5_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 14 Nov 2020 06:07:28 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.48), bash (= 5.1~rc2-1), binutils (= 2.35.1-2), binutils-common (= 2.35.1-2), binutils-x86-64-linux-gnu (= 2.35.1-2), bsdextrautils (= 2.36-3+b2), bsdutils (= 1:2.36-3+b2), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-17), dash (= 0.5.11+git20200708+dd9ef66-2), debconf (= 1.5.74), debhelper (= 13.2.1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), exonerate (= 2.4.0-4), file (= 1:5.38-5), findutils (= 4.7.0+git20201010-2), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-17), gawk (= 1:5.0.1+dfsg-1), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-17), gcc-10-base (= 10.2.0-17), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), help2man (= 1.47.16), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-17), libatomic1 (= 10.2.0-17), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3.1), libaudit1 (= 1:2.8.5-3.1), libbinutils (= 2.35.1-2), libblkid1 (= 2.36-3+b2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-4), libc-dev-bin (= 2.31-4), libc6 (= 2.31-4), libc6-dev (= 2.31-4), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-17), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-2), libctf0 (= 2.35.1-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.255), libdebhelper-perl (= 13.2.1), libdpkg-perl (= 1.20.5), libelf1 (= 0.182-1), libffi7 (= 3.3-5), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-17), libgcc-s1 (= 10.2.0-17), libgcrypt20 (= 1.8.7-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.2-1), libgmp10 (= 2:6.2.0+dfsg-6), libgomp1 (= 10.2.0-17), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libicu67 (= 67.1-4), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-17), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), liblocale-gettext-perl (= 1.07-4+b1), liblsan0 (= 10.2.0-17), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3+b2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnss-nis (= 3.1-4), libnss-nisplus (= 1.3-4), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-4), libpipeline1 (= 1.5.3-1), libquadmath0 (= 10.2.0-17), libreadline8 (= 8.1~rc2-2), libseccomp2 (= 2.5.0-3), libselinux1 (= 3.1-2+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-3+b2), libssl1.1 (= 1.1.1h-1), libstdc++-10-dev (= 10.2.0-17), libstdc++6 (= 10.2.0-17), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-2), libtinfo6 (= 6.2+20200918-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-17), libubsan1 (= 10.2.0-17), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-2), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3+b2), libxml2 (= 2.9.10+dfsg-6.2), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.9.6-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), mummer (= 3.23+dfsg-6), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), patch (= 2.7.6-6), perl (= 5.32.0-4), perl-base (= 5.32.0-4), perl-modules-5.32 (= 5.32.0-4), po-debconf (= 1.0.21), readline-common (= 8.1~rc2-2), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-3+b2), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605196636" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ fsa-dbgsym_1.15.9+dfsg-5_arm64.deb ---------------------------------- new Debian package, version 2.0. size 14317132 bytes: control archive=1096 bytes. 778 bytes, 12 lines control 1247 bytes, 12 lines md5sums Package: fsa-dbgsym Source: fsa Version: 1.15.9+dfsg-5 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 14954 Depends: fsa (= 1.15.9+dfsg-5) Section: debug Priority: optional Description: debug symbols for fsa Build-Ids: 2ca7246d4578ec7ee2e54ac81e07a5c515801be5 379a29601358b606adfc3b38b9c42646947ec1cb 48cded064133e009dff2fd057b91418e9fd87304 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2020-11-12 15:57 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-11-12 15:57 ./usr/share/doc/fsa-dbgsym -> fsa fsa_1.15.9+dfsg-5_arm64.deb --------------------------- new Debian package, version 2.0. size 598432 bytes: control archive=2712 bytes. 2335 bytes, 40 lines control 3513 bytes, 49 lines md5sums Package: fsa Version: 1.15.9+dfsg-5 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3827 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), mummer, exonerate Recommends: med-config (>= 2.1) Section: science Priority: optional Homepage: http://fsa.sourceforge.net/ Description: Fast Statistical Alignment of protein, RNA or DNA sequences FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much as distance-based phylogenetic reconstruction methods like Neighbor-Joining build a phylogeny using only pairwise divergence estimates, FSA builds a multiple alignment using only pairwise estimations of homology. This is made possible by the sequence annealing technique for constructing a multiple alignment from pairwise comparisons, developed by Ariel Schwartz. . FSA brings the high accuracies previously available only for small-scale analyses of proteins or RNAs to large-scale problems such as aligning thousands of sequences or megabase-long sequences. FSA introduces several novel methods for constructing better alignments: * FSA uses machine-learning techniques to estimate gap and substitution parameters on the fly for each set of input sequences. This "query-specific learning" alignment method makes FSA very robust: it can produce superior alignments of sets of homologous sequences which are subject to very different evolutionary constraints. * FSA is capable of aligning hundreds or even thousands of sequences using a randomized inference algorithm to reduce the computational cost of multiple alignment. This randomized inference can be over ten times faster than a direct approach with little loss of accuracy. * FSA can quickly align very long sequences using the "anchor annealing" technique for resolving anchors and projecting them with transitive anchoring. It then stitches together the alignment between the anchors using the methods described above. * The included GUI, MAD (Multiple Alignment Display), can display the intermediate alignments produced by FSA, where each character is colored according to the probability that it is correctly aligned drwxr-xr-x root/root 0 2020-11-12 15:57 ./ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/bin/ -rwxr-xr-x root/root 1030816 2020-11-12 15:57 ./usr/bin/fsa -rwxr-xr-x root/root 142056 2020-11-12 15:57 ./usr/bin/fsa-translate -rwxr-xr-x root/root 350976 2020-11-12 15:57 ./usr/bin/gapcleaner -rwxr-xr-x root/root 240616 2020-11-12 15:57 ./usr/bin/isect_mercator_alignment_gff -rwxr-xr-x root/root 236424 2020-11-12 15:57 ./usr/bin/map_coords -rwxr-xr-x root/root 236520 2020-11-12 15:57 ./usr/bin/map_gff_coords -rwxr-xr-x root/root 137960 2020-11-12 15:57 ./usr/bin/percentid -rwxr-xr-x root/root 137960 2020-11-12 15:57 ./usr/bin/prot2codon -rwxr-xr-x root/root 142056 2020-11-12 15:57 ./usr/bin/slice_fasta -rwxr-xr-x root/root 183048 2020-11-12 15:57 ./usr/bin/slice_fasta_gff -rwxr-xr-x root/root 236520 2020-11-12 15:57 ./usr/bin/slice_mercator_alignment drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/bin/ lrwxrwxrwx root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/bin/tranlate -> ../../../bin/fsa-translate drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/share/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/share/man/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/share/man/man1/ lrwxrwxrwx root/root 0 2020-11-12 15:57 ./usr/lib/debian-med/share/man/man1/translate.1.gz -> ../../../../../share/man/man1/fsa-translate.1.gz drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/doc/fsa/ -rw-r--r-- root/root 24437 2020-11-12 15:57 ./usr/share/doc/fsa/FAQ.html -rw-r--r-- root/root 5889 2014-05-16 17:25 ./usr/share/doc/fsa/README.gz -rw-r--r-- root/root 671 2020-11-12 15:57 ./usr/share/doc/fsa/changelog.Debian.gz -rw-r--r-- root/root 3603 2020-11-12 15:57 ./usr/share/doc/fsa/copyright drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/doc/fsa/examples/ -rw-r--r-- root/root 1244 2012-03-22 17:09 ./usr/share/doc/fsa/examples/README -rw-r--r-- root/root 1505 2012-03-22 17:09 ./usr/share/doc/fsa/examples/RV12.BBS12030.fasta -rw-r--r-- root/root 33181 2012-03-22 17:09 ./usr/share/doc/fsa/examples/RV12.BBS12030.fasta.gui -rw-r--r-- root/root 393175 2012-03-22 17:09 ./usr/share/doc/fsa/examples/RV12.BBS12030.fasta.probs -rw-r--r-- root/root 1547 2012-03-22 17:09 ./usr/share/doc/fsa/examples/RV12.BBS12030.mfa -rw-r--r-- root/root 1546 2012-03-22 17:09 ./usr/share/doc/fsa/examples/RV12.BBS12030.reference.mfa -rw-r--r-- root/root 1543 2012-03-22 17:09 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17:09 ./usr/share/doc/fsa/examples/tRNA.aln1.fasta.probs -rw-r--r-- root/root 488 2012-03-22 17:09 ./usr/share/doc/fsa/examples/tRNA.aln1.mfa -rw-r--r-- root/root 492 2012-03-22 17:09 ./usr/share/doc/fsa/examples/tRNA.aln1.reference.mfa -rw-r--r-- root/root 1185 2012-03-22 17:09 ./usr/share/doc/fsa/examples/tRNA.aln1.reference.stock -rw-r--r-- root/root 639 2012-03-22 17:09 ./usr/share/doc/fsa/examples/tRNA.aln1.stock -rw-r--r-- root/root 266 2012-03-22 17:09 ./usr/share/doc/fsa/pretty.css drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/man/ drwxr-xr-x root/root 0 2020-11-12 15:57 ./usr/share/man/man1/ -rw-r--r-- root/root 402 2020-11-12 15:57 ./usr/share/man/man1/fsa-translate.1.gz -rw-r--r-- root/root 393 2020-11-12 15:57 ./usr/share/man/man1/fsa.1.gz -rw-r--r-- root/root 467 2020-11-12 15:57 ./usr/share/man/man1/gapcleaner.1.gz -rw-r--r-- root/root 1077 2020-11-12 15:57 ./usr/share/man/man1/isect_mercator_alignment_gff.1.gz -rw-r--r-- root/root 695 2020-11-12 15:57 ./usr/share/man/man1/map_coords.1.gz -rw-r--r-- root/root 1074 2020-11-12 15:57 ./usr/share/man/man1/map_gff_coords.1.gz -rw-r--r-- root/root 378 2020-11-12 15:57 ./usr/share/man/man1/percentid.1.gz -rw-r--r-- root/root 411 2020-11-12 15:57 ./usr/share/man/man1/prot2codon.1.gz -rw-r--r-- root/root 443 2020-11-12 15:57 ./usr/share/man/man1/slice_fasta.1.gz -rw-r--r-- root/root 533 2020-11-12 15:57 ./usr/share/man/man1/slice_fasta_gff.1.gz -rw-r--r-- root/root 870 2020-11-12 15:57 ./usr/share/man/man1/slice_mercator_alignment.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [553 B] Get:5 copy:/<>/apt_archive ./ Packages [640 B] Fetched 2156 B in 0s (85.2 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 87 newly installed, 0 to remove and 0 not upgraded. Need to get 7301 kB of archives. After this operation, 21.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [844 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b4 [71.9 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b6 [38.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.25-1+b1 [129 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b6 [63.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4+b1 [38.8 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1 [21.8 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.6-1 [36.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2+b1 [45.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1+b1 [13.0 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012000-1 [348 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.05-1 [90.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.102.0 [1271 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7301 kB in 0s (25.0 MB/s) Selecting previously unselected package diffstat. (Reading database ... 21767 files and directories currently installed.) Preparing to unpack .../00-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../01-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../02-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../03-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../04-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../05-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../06-libapt-pkg-perl_0.1.36+b4_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b4) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../07-libb-hooks-op-check-perl_0.22-1+b3_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b3) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../08-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../09-libdevel-callchecker-perl_0.008-1+b2_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../10-libparams-classify-perl_0.015-1+b3_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../11-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../12-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../13-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../14-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../15-libvariable-magic-perl_0.62-1+b3_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b3) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../16-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../17-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../18-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../19-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../20-libclass-xsaccessor-perl_1.19-3+b6_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b6) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../21-libclone-perl_0.45-1+b1_amd64.deb ... Unpacking libclone-perl (0.45-1+b1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../22-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../23-libcpanel-json-xs-perl_4.25-1+b1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.25-1+b1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../24-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../25-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../26-libiterator-perl_0.03+ds1-1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../27-libiterator-util-perl_0.02+ds1-1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../28-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../29-liblist-moreutils-perl_0.416-1+b6_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b6) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../30-libparams-util-perl_1.102-1+b1_amd64.deb ... Unpacking libparams-util-perl (1.102-1+b1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../31-libsub-install-perl_0.928-1_all.deb ... Unpacking libsub-install-perl (0.928-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../32-libdata-optlist-perl_0.110-1_all.deb ... Unpacking libdata-optlist-perl (0.110-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../33-libsub-exporter-perl_0.987-1_all.deb ... Unpacking libsub-exporter-perl (0.987-1) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../34-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../35-libdata-messagepack-perl_1.00-4+b1_amd64.deb ... Unpacking libdata-messagepack-perl (1.00-4+b1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../36-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libdata-validate-domain-perl. 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Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b6) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up libhtml-html5-entities-perl (0.004-1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.6-1) ... Setting up liburi-perl (5.05-1) ... Setting up gpg (2.2.20-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b6) ... Setting up libtype-tiny-perl (1.012000-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.102.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 262328 Build-Time: 169 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 30 Job: fsa_1.15.9+dfsg-5 Lintian: pass Machine Architecture: amd64 Package: fsa Package-Time: 213 Source-Version: 1.15.9+dfsg-5 Space: 262328 Status: successful Version: 1.15.9+dfsg-5 -------------------------------------------------------------------------------- Finished at 2020-11-14T06:07:29Z Build needed 00:03:33, 262328k disk space