sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | garli 2.1-9 (riscv64) Thu, 03 Apr 2025 09:28:33 +0000 | +==============================================================================+ Package: garli Version: 2.1-9 Source Version: 2.1-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: riscv64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-5ac12e91-520a-460b-9244-edabcadd7c53' with '<>' I: NOTICE: Log filtering will replace 'build/garli-alwtPC/resolver-EZIgTN' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [205 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/non-free-firmware Sources.diff/Index [63.3 kB] Get:4 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB] Get:5 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:7 http://localhost:3142/debian unstable/main Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [49.3 kB] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-04-03-0204.24-F-2025-04-03-0204.24.pdiff [29 B] Get:9 http://localhost:3142/debian unstable/contrib Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [799 B] Get:10 http://localhost:3142/debian unstable/non-free Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [2323 B] Get:7 http://localhost:3142/debian unstable/main Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [49.3 kB] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [92.3 kB] Get:10 http://localhost:3142/debian unstable/non-free Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [2323 B] Get:9 http://localhost:3142/debian unstable/contrib Sources T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [799 B] Get:8 http://localhost:3142/debian unstable/non-free-firmware Sources T-2025-04-03-0204.24-F-2025-04-03-0204.24.pdiff [29 B] Get:11 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-03-0810.25-F-2025-04-03-0204.24.pdiff [92.3 kB] Get:12 http://localhost:3142/debian unstable/main riscv64 Packages [9753 kB] Fetched 10.4 MB in 3s (3710 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: liblastlog2-2 libsqlite3-0 The following packages will be upgraded: bsdutils libblkid1 libmount1 libsmartcols1 libuuid1 login mount util-linux 8 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 3115 kB of archives. After this operation, 2221 kB of additional disk space will be used. Get:1 http://localhost:3142/debian unstable/main amd64 bsdutils amd64 1:2.41-3 [110 kB] Get:2 http://localhost:3142/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-2 [913 kB] Get:3 http://localhost:3142/debian unstable/main amd64 liblastlog2-2 amd64 2.41-3 [28.3 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libuuid1 amd64 2.41-3 [37.5 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libblkid1 amd64 2.41-3 [171 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libmount1 amd64 2.41-3 [208 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libsmartcols1 amd64 2.41-3 [142 kB] Get:8 http://localhost:3142/debian unstable/main amd64 util-linux amd64 2.41-3 [1231 kB] Get:9 http://localhost:3142/debian unstable/main amd64 mount amd64 2.41-3 [162 kB] Get:10 http://localhost:3142/debian unstable/main amd64 login amd64 1:4.16.0-2+really2.41-3 [112 kB] Fetched 3115 kB in 0s (133 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.41-6) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'garli' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/garli.git Please use: git clone https://salsa.debian.org/med-team/garli.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1256 kB of source archives. Get:1 http://localhost:3142/debian unstable/main garli 2.1-9 (dsc) [2186 B] Get:2 http://localhost:3142/debian unstable/main garli 2.1-9 (tar) [1249 kB] Get:3 http://localhost:3142/debian unstable/main garli 2.1-9 (diff) [5072 B] Fetched 1256 kB in 1s (964 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/garli-alwtPC/garli-2.1' with '<>' I: NOTICE: Log filtering will replace 'build/garli-alwtPC' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libncl-dev, mpi-default-dev, ncl-tools, bc, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 Filtered Build-Depends: debhelper-compat (= 13), libncl-dev, mpi-default-dev, ncl-tools, bc, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [764 B] Get:5 copy:/<>/apt_archive ./ Packages [809 B] Fetched 2182 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: adduser autoconf automake autopoint autotools-dev bc binutils-riscv64-linux-gnu bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file flang-19:riscv64 g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base groff-base ibverbs-providers ibverbs-providers:riscv64 intltool-debian libamd-comgr2 libamdhip64-5 libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libbsd0:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcap2:riscv64 libcbor0.10 libclang-cpp19:riscv64 libcom-err2 libcrypt-dev:riscv64 libcrypt1:riscv64 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libedit2:riscv64 libelf1t64 libevent-2.1-7t64:riscv64 libevent-core-2.1-7t64 libevent-core-2.1-7t64:riscv64 libevent-dev:riscv64 libevent-extra-2.1-7t64:riscv64 libevent-openssl-2.1-7t64:riscv64 libevent-pthreads-2.1-7t64 libevent-pthreads-2.1-7t64:riscv64 libfabric1 libfabric1:riscv64 libfakeroot libffi8 libffi8:riscv64 libfido2-1 libfile-stripnondeterminism-perl libflang-19-dev:riscv64 libfuse3-4 libfuse3-4:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgomp1:riscv64 libgomp1-riscv64-cross libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-dev:riscv64 libhwloc-plugins libhwloc-plugins:riscv64 libhwloc15 libhwloc15:riscv64 libibmad5 libibmad5:riscv64 libibumad3 libibumad3:riscv64 libibverbs-dev:riscv64 libibverbs1 libibverbs1:riscv64 libitm1:riscv64 libitm1-riscv64-cross libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libllvm17t64 libllvm19:riscv64 liblsan0:riscv64 liblsan0-riscv64-cross libltdl-dev:riscv64 libltdl7:riscv64 liblzma5:riscv64 libmagic-mgc libmagic1t64 libmd0:riscv64 libmunge2 libmunge2:riscv64 libncl-dev:riscv64 libncl2:riscv64 libnl-3-200 libnl-3-200:riscv64 libnl-3-dev:riscv64 libnl-route-3-200 libnl-route-3-200:riscv64 libnl-route-3-dev:riscv64 libnuma-dev:riscv64 libnuma1 libnuma1:riscv64 libopenmpi-dev:riscv64 libopenmpi40 libopenmpi40:riscv64 libpciaccess0 libpciaccess0:riscv64 libpipeline1 libpmix-dev:riscv64 libpmix2t64 libpmix2t64:riscv64 libpsm2-2 librdmacm1t64 librdmacm1t64:riscv64 libreadline8t64 libssl3t64:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libtinfo6:riscv64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libucx0 libucx0:riscv64 libudev1:riscv64 libunistring5 libx11-6 libx11-6:riscv64 libx11-data libxau6 libxau6:riscv64 libxcb1 libxcb1:riscv64 libxdmcp6 libxdmcp6:riscv64 libxext6 libxext6:riscv64 libxml2 libxml2:riscv64 libxnvctrl0 libxnvctrl0:riscv64 libz3-4 libz3-4:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db mpi-default-dev:riscv64 ncl-tools:riscv64 ocl-icd-libopencl1 ocl-icd-libopencl1:riscv64 openmpi-bin openmpi-common openssh-client po-debconf readline-common sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 Suggested packages: liblocale-gettext-perl cron quota autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-riscv64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:riscv64 libc-l10n:riscv64 locales:riscv64 libnss-nis:riscv64 libnss-nisplus:riscv64 manpages-dev:riscv64 fuse3 fuse3:riscv64 krb5-doc krb5-user libhwloc-contrib-plugins libjs-jquery-ui-docs libtool-doc:riscv64 openmpi-doc:riscv64 pciutils pciutils:riscv64 libstdc++-14-doc:riscv64 libtool-doc gfortran | fortran95-compiler gcj-jdk libidn2-0:riscv64 m4-doc apparmor less www-browser opencl-icd opencl-icd:riscv64 gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl readline-doc Recommended packages: curl | wget | lynx libidn2-0:riscv64 libarchive-cpio-perl javascript-common krb5-locales libcoarrays-openmpi-dev:riscv64 libltdl-dev xauth libmail-sendmail-perl The following NEW packages will be installed: adduser autoconf automake autopoint autotools-dev bc binutils-riscv64-linux-gnu bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file flang-19:riscv64 g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base groff-base ibverbs-providers ibverbs-providers:riscv64 intltool-debian libamd-comgr2 libamdhip64-5 libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libbsd0:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcap2:riscv64 libcbor0.10 libclang-cpp19:riscv64 libcom-err2 libcrypt-dev:riscv64 libcrypt1:riscv64 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libedit2:riscv64 libelf1t64 libevent-2.1-7t64:riscv64 libevent-core-2.1-7t64 libevent-core-2.1-7t64:riscv64 libevent-dev:riscv64 libevent-extra-2.1-7t64:riscv64 libevent-openssl-2.1-7t64:riscv64 libevent-pthreads-2.1-7t64 libevent-pthreads-2.1-7t64:riscv64 libfabric1 libfabric1:riscv64 libfakeroot libffi8 libffi8:riscv64 libfido2-1 libfile-stripnondeterminism-perl libflang-19-dev:riscv64 libfuse3-4 libfuse3-4:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgomp1:riscv64 libgomp1-riscv64-cross libgssapi-krb5-2 libhsa-runtime64-1 libhsakmt1 libhwloc-dev:riscv64 libhwloc-plugins libhwloc-plugins:riscv64 libhwloc15 libhwloc15:riscv64 libibmad5 libibmad5:riscv64 libibumad3 libibumad3:riscv64 libibverbs-dev:riscv64 libibverbs1 libibverbs1:riscv64 libitm1:riscv64 libitm1-riscv64-cross libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libllvm17t64 libllvm19:riscv64 liblsan0:riscv64 liblsan0-riscv64-cross libltdl-dev:riscv64 libltdl7:riscv64 liblzma5:riscv64 libmagic-mgc libmagic1t64 libmd0:riscv64 libmunge2 libmunge2:riscv64 libncl-dev:riscv64 libncl2:riscv64 libnl-3-200 libnl-3-200:riscv64 libnl-3-dev:riscv64 libnl-route-3-200 libnl-route-3-200:riscv64 libnl-route-3-dev:riscv64 libnuma-dev:riscv64 libnuma1 libnuma1:riscv64 libopenmpi-dev:riscv64 libopenmpi40 libopenmpi40:riscv64 libpciaccess0 libpciaccess0:riscv64 libpipeline1 libpmix-dev:riscv64 libpmix2t64 libpmix2t64:riscv64 libpsm2-2 librdmacm1t64 librdmacm1t64:riscv64 libreadline8t64 libssl3t64:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libtinfo6:riscv64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libucx0 libucx0:riscv64 libudev1:riscv64 libunistring5 libx11-6 libx11-6:riscv64 libx11-data libxau6 libxau6:riscv64 libxcb1 libxcb1:riscv64 libxdmcp6 libxdmcp6:riscv64 libxext6 libxext6:riscv64 libxml2 libxml2:riscv64 libxnvctrl0 libxnvctrl0:riscv64 libz3-4 libz3-4:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db mpi-default-dev:riscv64 ncl-tools:riscv64 ocl-icd-libopencl1 ocl-icd-libopencl1:riscv64 openmpi-bin openmpi-common openssh-client po-debconf readline-common sbuild-build-depends-main-dummy:riscv64 sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 0 upgraded, 189 newly installed, 0 to remove and 0 not upgraded. Need to get 304 MB of archives. After this operation, 2033 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B] Get:2 http://localhost:3142/debian unstable/main amd64 adduser all 3.150 [187 kB] Get:3 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get:4 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-4 [337 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-4 [109 kB] Get:7 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-4 [43.5 kB] Get:8 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:10 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:11 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41-3 [94.4 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:13 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get:16 http://localhost:3142/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1+b1 [24.3 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:21 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Get:23 http://localhost:3142/debian unstable/main amd64 openssh-client amd64 1:9.9p2-2 [968 kB] Get:24 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-7 [294 kB] Get:25 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:26 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:27 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:28 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:30 http://localhost:3142/debian unstable/main amd64 bc amd64 1.07.1-4 [103 kB] Get:31 http://localhost:3142/debian unstable/main amd64 binutils-riscv64-linux-gnu amd64 2.44-3 [1428 kB] Get:32 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu-base amd64 14.2.0-19cross1 [49.6 kB] Get:33 http://localhost:3142/debian unstable/main amd64 cpp-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [13.3 MB] Get:34 http://localhost:3142/debian unstable/main amd64 cpp-riscv64-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:35 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libc6-riscv64-cross all 2.41-6cross2 [1169 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libgcc-s1-riscv64-cross all 14.2.0-19cross1 [56.8 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libgomp1-riscv64-cross all 14.2.0-19cross1 [128 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libitm1-riscv64-cross all 14.2.0-19cross1 [25.2 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libatomic1-riscv64-cross all 14.2.0-19cross1 [8316 B] Get:41 http://localhost:3142/debian unstable/main amd64 libasan8-riscv64-cross all 14.2.0-19cross1 [2354 kB] Get:42 http://localhost:3142/debian unstable/main amd64 liblsan0-riscv64-cross all 14.2.0-19cross1 [1076 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libtsan2-riscv64-cross all 14.2.0-19cross1 [2230 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libstdc++6-riscv64-cross all 14.2.0-19cross1 [660 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libubsan1-riscv64-cross all 14.2.0-19cross1 [978 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-riscv64-cross all 14.2.0-19cross1 [5178 kB] Get:47 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [25.7 MB] Get:48 http://localhost:3142/debian unstable/main amd64 gcc-riscv64-linux-gnu amd64 4:14.2.0-1 [1444 B] Get:49 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-riscv64-cross all 6.12.17-1cross2 [2339 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libc6-dev-riscv64-cross all 2.41-6cross2 [3123 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-riscv64-cross all 14.2.0-19cross1 [4940 kB] Get:52 http://localhost:3142/debian unstable/main amd64 g++-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [14.3 MB] Get:53 http://localhost:3142/debian unstable/main amd64 g++-riscv64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:54 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-riscv64 all 12.12 [3544 B] Get:55 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:57 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:60 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:61 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:62 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB] Get:65 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:66 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.1-1 [29.6 kB] Get:70 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.1-1 [76.0 kB] Get:71 http://localhost:3142/debian unstable/main riscv64 gcc-14-base riscv64 14.2.0-19 [49.4 kB] Get:72 http://localhost:3142/debian unstable/main riscv64 libgcc-s1 riscv64 14.2.0-19 [56.8 kB] Get:73 http://localhost:3142/debian unstable/main riscv64 libc6 riscv64 2.41-6 [2465 kB] Get:74 http://localhost:3142/debian unstable/main riscv64 libatomic1 riscv64 14.2.0-19 [8672 B] Get:75 http://localhost:3142/debian unstable/main riscv64 libmd0 riscv64 1.1.0-2+b1 [37.6 kB] Get:76 http://localhost:3142/debian unstable/main riscv64 libbsd0 riscv64 0.12.2-2 [132 kB] Get:77 http://localhost:3142/debian unstable/main riscv64 libtinfo6 riscv64 6.5+20250216-2 [347 kB] Get:78 http://localhost:3142/debian unstable/main riscv64 libedit2 riscv64 3.1-20250104-1 [92.5 kB] Get:79 http://localhost:3142/debian unstable/main riscv64 libffi8 riscv64 3.4.7-1 [21.6 kB] Get:80 http://localhost:3142/debian unstable/main riscv64 libstdc++6 riscv64 14.2.0-19 [707 kB] Get:81 http://localhost:3142/debian unstable/main riscv64 liblzma5 riscv64 5.6.4-1 [285 kB] Get:82 http://localhost:3142/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Get:83 http://localhost:3142/debian unstable/main riscv64 libxml2 riscv64 2.12.7+dfsg+really2.9.14-0.4 [708 kB] Get:84 http://localhost:3142/debian unstable/main riscv64 libz3-4 riscv64 4.13.3-1 [8514 kB] Get:85 http://localhost:3142/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-1 [360 kB] Get:86 http://localhost:3142/debian unstable/main riscv64 libllvm19 riscv64 1:19.1.7-3 [24.9 MB] Get:87 http://localhost:3142/debian unstable/main riscv64 libclang-cpp19 riscv64 1:19.1.7-3 [12.7 MB] Get:88 http://localhost:3142/debian unstable/main riscv64 libgomp1 riscv64 14.2.0-19 [130 kB] Get:89 http://localhost:3142/debian unstable/main riscv64 libitm1 riscv64 14.2.0-19 [25.8 kB] Get:90 http://localhost:3142/debian unstable/main riscv64 libasan8 riscv64 14.2.0-19 [2365 kB] Get:91 http://localhost:3142/debian unstable/main riscv64 liblsan0 riscv64 14.2.0-19 [1078 kB] Get:92 http://localhost:3142/debian unstable/main riscv64 libtsan2 riscv64 14.2.0-19 [2241 kB] Get:93 http://localhost:3142/debian unstable/main riscv64 libubsan1 riscv64 14.2.0-19 [979 kB] Get:94 http://localhost:3142/debian unstable/main riscv64 libgcc-14-dev riscv64 14.2.0-19 [5190 kB] Get:95 http://localhost:3142/debian unstable/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB] Get:96 http://localhost:3142/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB] Get:97 http://localhost:3142/debian unstable/main riscv64 libc6-dev riscv64 2.41-6 [3127 kB] Get:98 http://localhost:3142/debian unstable/main riscv64 libstdc++-14-dev riscv64 14.2.0-19 [5276 kB] Get:99 http://localhost:3142/debian unstable/main riscv64 libflang-19-dev riscv64 1:19.1.7-3 [26.9 MB] Get:100 http://localhost:3142/debian unstable/main riscv64 flang-19 riscv64 1:19.1.7-3 [24.6 MB] Get:101 http://localhost:3142/debian unstable/main riscv64 libnl-3-200 riscv64 3.7.0-2 [60.0 kB] Get:102 http://localhost:3142/debian unstable/main riscv64 libnl-route-3-200 riscv64 3.7.0-2 [183 kB] Get:103 http://localhost:3142/debian unstable/main riscv64 libibverbs1 riscv64 56.0-4 [62.6 kB] Get:104 http://localhost:3142/debian unstable/main riscv64 ibverbs-providers riscv64 56.0-4 [388 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-2 [59.4 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-2 [182 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libibverbs1 amd64 56.0-4 [62.4 kB] Get:108 http://localhost:3142/debian unstable/main amd64 ibverbs-providers amd64 56.0-4 [357 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB] Get:110 http://localhost:3142/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-21+b1 [23.6 MB] Get:112 http://localhost:3142/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get:113 http://localhost:3142/debian unstable/main amd64 libdrm-common all 2.4.124-2 [8288 B] Get:114 http://localhost:3142/debian unstable/main amd64 libdrm2 amd64 2.4.124-2 [39.0 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.124-2 [22.6 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get:117 http://localhost:3142/debian unstable/main amd64 libhsakmt1 amd64 6.2.4+ds-1 [61.1 kB] Get:118 http://localhost:3142/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-3 [535 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5+b1 [8882 kB] Get:120 http://localhost:3142/debian unstable/main riscv64 libcap2 riscv64 1:2.75-4 [28.4 kB] Get:121 http://localhost:3142/debian unstable/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b1 [182 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get:123 http://localhost:3142/debian unstable/main riscv64 libevent-core-2.1-7t64 riscv64 2.1.12-stable-10+b1 [132 kB] Get:124 http://localhost:3142/debian unstable/main riscv64 libevent-extra-2.1-7t64 riscv64 2.1.12-stable-10+b1 [108 kB] Get:125 http://localhost:3142/debian unstable/main riscv64 libevent-pthreads-2.1-7t64 riscv64 2.1.12-stable-10+b1 [54.1 kB] Get:126 http://localhost:3142/debian unstable/main riscv64 libssl3t64 riscv64 3.4.1-1 [2098 kB] Get:127 http://localhost:3142/debian unstable/main riscv64 libevent-openssl-2.1-7t64 riscv64 2.1.12-stable-10+b1 [60.6 kB] Get:128 http://localhost:3142/debian unstable/main riscv64 libevent-dev riscv64 2.1.12-stable-10+b1 [523 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get:130 http://localhost:3142/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:131 http://localhost:3142/debian unstable/main amd64 librdmacm1t64 amd64 56.0-4 [70.2 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libfabric1 amd64 2.0.0-4 [700 kB] Get:133 http://localhost:3142/debian unstable/main riscv64 librdmacm1t64 riscv64 56.0-4 [74.3 kB] Get:134 http://localhost:3142/debian unstable/main riscv64 libfabric1 riscv64 2.0.0-4 [595 kB] Get:135 http://localhost:3142/debian unstable/main riscv64 libfuse3-4 riscv64 3.17.1-1 [96.6 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libfuse3-4 amd64 3.17.1-1 [97.7 kB] Get:137 http://localhost:3142/debian unstable/main riscv64 libudev1 riscv64 257.4-9 [153 kB] Get:138 http://localhost:3142/debian unstable/main riscv64 libhwloc15 riscv64 2.12.0-1 [158 kB] Get:139 http://localhost:3142/debian unstable/main riscv64 libnuma1 riscv64 2.0.18-1+b1 [23.4 kB] Get:140 http://localhost:3142/debian unstable/main riscv64 libnuma-dev riscv64 2.0.18-1+b1 [66.1 kB] Get:141 http://localhost:3142/debian unstable/main riscv64 libltdl7 riscv64 2.5.4-4 [415 kB] Get:142 http://localhost:3142/debian unstable/main riscv64 libltdl-dev riscv64 2.5.4-4 [188 kB] Get:143 http://localhost:3142/debian unstable/main riscv64 libhwloc-dev riscv64 2.12.0-1 [516 kB] Get:144 http://localhost:3142/debian unstable/main riscv64 libpciaccess0 riscv64 0.17-3+b3 [51.6 kB] Get:145 http://localhost:3142/debian unstable/main riscv64 libxau6 riscv64 1:1.0.11-1 [20.5 kB] Get:146 http://localhost:3142/debian unstable/main riscv64 libxdmcp6 riscv64 1:1.1.5-1 [28.0 kB] Get:147 http://localhost:3142/debian unstable/main riscv64 libxcb1 riscv64 1.17.0-2+b1 [145 kB] Get:148 http://localhost:3142/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get:149 http://localhost:3142/debian unstable/main riscv64 libx11-6 riscv64 2:1.8.12-1 [817 kB] Get:150 http://localhost:3142/debian unstable/main riscv64 libxext6 riscv64 2:1.3.4-1+b3 [51.7 kB] Get:151 http://localhost:3142/debian unstable/main riscv64 libxnvctrl0 riscv64 535.171.04-1+b2 [14.5 kB] Get:152 http://localhost:3142/debian unstable/main riscv64 ocl-icd-libopencl1 riscv64 2.3.2-1+b2 [39.1 kB] Get:153 http://localhost:3142/debian unstable/main riscv64 libhwloc-plugins riscv64 2.12.0-1 [17.5 kB] Get:154 http://localhost:3142/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Get:155 http://localhost:3142/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:156 http://localhost:3142/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:157 http://localhost:3142/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:158 http://localhost:3142/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get:159 http://localhost:3142/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get:160 http://localhost:3142/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b2 [14.2 kB] Get:161 http://localhost:3142/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get:162 http://localhost:3142/debian unstable/main amd64 libhwloc15 amd64 2.12.0-1 [164 kB] Get:163 http://localhost:3142/debian unstable/main amd64 libhwloc-plugins amd64 2.12.0-1 [18.1 kB] Get:164 http://localhost:3142/debian unstable/main riscv64 libibumad3 riscv64 56.0-4 [29.6 kB] Get:165 http://localhost:3142/debian unstable/main riscv64 libibmad5 riscv64 56.0-4 [44.5 kB] Get:166 http://localhost:3142/debian unstable/main amd64 libibumad3 amd64 56.0-4 [29.9 kB] Get:167 http://localhost:3142/debian unstable/main amd64 libibmad5 amd64 56.0-4 [44.5 kB] Get:168 http://localhost:3142/debian unstable/main riscv64 libnl-3-dev riscv64 3.7.0-2 [171 kB] Get:169 http://localhost:3142/debian unstable/main riscv64 libnl-route-3-dev riscv64 3.7.0-2 [503 kB] Get:170 http://localhost:3142/debian unstable/main riscv64 libibverbs-dev riscv64 56.0-4 [1579 kB] Get:171 http://localhost:3142/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:172 http://localhost:3142/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:173 http://localhost:3142/debian unstable/main riscv64 libmunge2 riscv64 0.5.16-1 [19.9 kB] Get:174 http://localhost:3142/debian unstable/main amd64 libmunge2 amd64 0.5.16-1 [19.7 kB] Get:175 http://localhost:3142/debian unstable/main riscv64 libncl2 riscv64 2.1.21+git20210811.b1213a7-6 [348 kB] Get:176 http://localhost:3142/debian unstable/main riscv64 libncl-dev riscv64 2.1.21+git20210811.b1213a7-6 [2545 kB] Get:177 http://localhost:3142/debian unstable/main riscv64 libpmix2t64 riscv64 5.0.7-1 [656 kB] Get:178 http://localhost:3142/debian unstable/main riscv64 libucx0 riscv64 1.18.1+ds-2+b1 [1168 kB] Get:179 http://localhost:3142/debian unstable/main riscv64 libopenmpi40 riscv64 5.0.7-1 [2289 kB] Get:180 http://localhost:3142/debian unstable/main amd64 openmpi-common all 5.0.7-1 [97.2 kB] Get:181 http://localhost:3142/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Get:182 http://localhost:3142/debian unstable/main riscv64 libpmix-dev riscv64 5.0.7-1 [5515 kB] Get:183 http://localhost:3142/debian unstable/main amd64 libpmix2t64 amd64 5.0.7-1 [660 kB] Get:184 http://localhost:3142/debian unstable/main amd64 libucx0 amd64 1.18.1+ds-2+b1 [1196 kB] Get:185 http://localhost:3142/debian unstable/main amd64 libopenmpi40 amd64 5.0.7-1 [2365 kB] Get:186 http://localhost:3142/debian unstable/main amd64 openmpi-bin amd64 5.0.7-1 [189 kB] Get:187 http://localhost:3142/debian unstable/main riscv64 libopenmpi-dev riscv64 5.0.7-1 [1089 kB] Get:188 http://localhost:3142/debian unstable/main riscv64 mpi-default-dev riscv64 1.18 [3376 B] Get:189 http://localhost:3142/debian unstable/main riscv64 ncl-tools riscv64 2.1.21+git20210811.b1213a7-6 [173 kB] Preconfiguring packages ... Fetched 304 MB in 3s (107 MB/s) Selecting previously unselected package adduser. (Reading database ... 12858 files and directories currently installed.) Preparing to unpack .../archives/adduser_3.150_all.deb ... Unpacking adduser (3.150) ... Setting up adduser (3.150) ... Selecting previously unselected package readline-common. (Reading database ... 12935 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.46-4_amd64.deb ... Unpacking libmagic-mgc (1:5.46-4) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../003-libmagic1t64_1%3a5.46-4_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-4) ... 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Setting up openmpi-common (5.0.7-1) ... Setting up libx11-6:amd64 (2:1.8.12-1) ... Setting up libc6-riscv64-cross (2.41-6cross2) ... Setting up libkrb5-3:amd64 (1.21.3-5) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libgomp1-riscv64-cross (14.2.0-19cross1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfuse3-4:amd64 (3.17.1-1) ... Setting up libfido2-1:amd64 (1.15.0-1+b1) ... Setting up libatomic1-riscv64-cross (14.2.0-19cross1) ... Setting up libdrm-common (2.4.124-2) ... Setting up readline-common (8.2-6) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-4) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up libitm1-riscv64-cross (14.2.0-19cross1) ... Setting up cpp-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:amd64 (3.7.0-2) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b2) ... Setting up dh-autoreconf (20) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:amd64 (1:17.0.6-21+b1) ... Setting up libgcc-s1-riscv64-cross (14.2.0-19cross1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-5) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up libdrm2:amd64 (2.4.124-2) ... Setting up groff-base (1.23.0-7) ... Setting up libc6-dev-riscv64-cross (2.41-6cross2) ... Setting up libasan8-riscv64-cross (14.2.0-19cross1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up cpp-riscv64-linux-gnu (4:14.2.0-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.124-2) ... Setting up libstdc++6-riscv64-cross (14.2.0-19cross1) ... Setting up libibverbs1:amd64 (56.0-4) ... Setting up ibverbs-providers:amd64 (56.0-4) ... Setting up libubsan1-riscv64-cross (14.2.0-19cross1) ... Setting up openssh-client (1:9.9p2-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up liblsan0-riscv64-cross (14.2.0-19cross1) ... Setting up bc (1.07.1-4) ... Setting up libtsan2-riscv64-cross (14.2.0-19cross1) ... Setting up libhwloc-plugins:amd64 (2.12.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpmix2t64:amd64 (5.0.7-1) ... Setting up librdmacm1t64:amd64 (56.0-4) ... Setting up libhsakmt1:amd64 (6.2.4+ds-1) ... Setting up libfabric1:amd64 (2.0.0-4) ... Setting up libgcc-14-dev-riscv64-cross (14.2.0-19cross1) ... Setting up libstdc++-14-dev-riscv64-cross (14.2.0-19cross1) ... Setting up debhelper (13.24.2) ... Setting up gcc-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-3) ... Setting up g++-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up gcc-riscv64-linux-gnu (4:14.2.0-1) ... Setting up g++-riscv64-linux-gnu (4:14.2.0-1) ... Setting up libamdhip64-5 (5.7.1-5+b1) ... Setting up libucx0:amd64 (1.18.1+ds-2+b1) ... Setting up crossbuild-essential-riscv64 (12.12) ... Setting up libopenmpi40:amd64 (5.0.7-1) ... Setting up openmpi-bin (5.0.7-1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libgcc-s1:riscv64 (14.2.0-19) ... Setting up libc6:riscv64 (2.41-6) ... Setting up libffi8:riscv64 (3.4.7-1) ... Setting up libnuma1:riscv64 (2.0.18-1+b1) ... Setting up libmd0:riscv64 (1.1.0-2+b1) ... Setting up ocl-icd-libopencl1:riscv64 (2.3.2-1+b2) ... Setting up libasan8:riscv64 (14.2.0-19) ... Setting up libnl-3-200:riscv64 (3.7.0-2) ... Setting up libevent-core-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up libtsan2:riscv64 (14.2.0-19) ... Setting up libfuse3-4:riscv64 (3.17.1-1) ... Setting up libbsd0:riscv64 (0.12.2-2) ... Setting up libstdc++6:riscv64 (14.2.0-19) ... Setting up liblsan0:riscv64 (14.2.0-19) ... Setting up libitm1:riscv64 (14.2.0-19) ... Setting up libtinfo6:riscv64 (6.5+20250216-2) ... Setting up libzstd1:riscv64 (1.5.7+dfsg-1) ... Setting up libxau6:riscv64 (1:1.0.11-1) ... Setting up libxdmcp6:riscv64 (1:1.1.5-1) ... Setting up libxcb1:riscv64 (1.17.0-2+b1) ... Setting up liblzma5:riscv64 (5.6.4-1) ... Setting up libevent-pthreads-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up libedit2:riscv64 (3.1-20250104-1) ... Setting up libibumad3:riscv64 (56.0-4) ... Setting up libevent-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up zlib1g:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:riscv64 (1:4.4.38-1) ... Setting up libibmad5:riscv64 (56.0-4) ... Setting up libgomp1:riscv64 (14.2.0-19) ... Setting up libncl2:riscv64 (2.1.21+git20210811.b1213a7-6) ... Setting up libcap2:riscv64 (1:2.75-4) ... Setting up libncl-dev:riscv64 (2.1.21+git20210811.b1213a7-6) ... Setting up libnl-route-3-200:riscv64 (3.7.0-2) ... Setting up libmunge2:riscv64 (0.5.16-1) ... Setting up libatomic1:riscv64 (14.2.0-19) ... Setting up libltdl7:riscv64 (2.5.4-4) ... Setting up libevent-extra-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up libudev1:riscv64 (257.4-9) ... Setting up libubsan1:riscv64 (14.2.0-19) ... Setting up libnl-3-dev:riscv64 (3.7.0-2) ... Setting up libcrypt-dev:riscv64 (1:4.4.38-1) ... Setting up libc6-dev:riscv64 (2.41-6) ... Setting up libx11-6:riscv64 (2:1.8.12-1) ... Setting up libgcc-14-dev:riscv64 (14.2.0-19) ... Setting up libstdc++-14-dev:riscv64 (14.2.0-19) ... Setting up libxml2:riscv64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up libpciaccess0:riscv64 (0.17-3+b3) ... Setting up libibverbs1:riscv64 (56.0-4) ... Setting up ibverbs-providers:riscv64 (56.0-4) ... Setting up libssl3t64:riscv64 (3.4.1-1) ... Setting up libevent-openssl-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up libflang-19-dev:riscv64 (1:19.1.7-3) ... Setting up libxext6:riscv64 (2:1.3.4-1+b3) ... Setting up ncl-tools:riscv64 (2.1.21+git20210811.b1213a7-6) ... Setting up libnuma-dev:riscv64 (2.0.18-1+b1) ... Setting up libxnvctrl0:riscv64 (535.171.04-1+b2) ... Setting up libnl-route-3-dev:riscv64 (3.7.0-2) ... Setting up libltdl-dev:riscv64 (2.5.4-4) ... Setting up libz3-4:riscv64 (4.13.3-1) ... Setting up libevent-dev:riscv64 (2.1.12-stable-10+b1) ... Setting up libhwloc15:riscv64 (2.12.0-1) ... Setting up zlib1g-dev:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up librdmacm1t64:riscv64 (56.0-4) ... Setting up libhwloc-dev:riscv64 (2.12.0-1) ... Setting up libfabric1:riscv64 (2.0.0-4) ... Setting up libllvm19:riscv64 (1:19.1.7-3) ... Setting up libucx0:riscv64 (1.18.1+ds-2+b1) ... Setting up libibverbs-dev:riscv64 (56.0-4) ... Setting up libhwloc-plugins:riscv64 (2.12.0-1) ... Setting up libpmix2t64:riscv64 (5.0.7-1) ... Setting up libpmix-dev:riscv64 (5.0.7-1) ... Setting up libclang-cpp19:riscv64 (1:19.1.7-3) ... Setting up flang-19:riscv64 (1:19.1.7-3) ... Setting up libopenmpi40:riscv64 (5.0.7-1) ... Setting up libopenmpi-dev:riscv64 (5.0.7-1) ... update-alternatives: using /usr/lib/riscv64-linux-gnu/openmpi/include to provide /usr/include/riscv64-linux-gnu/mpi (mpi-riscv64-linux-gnu) in auto mode Setting up mpi-default-dev:riscv64 (1.18) ... Setting up sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ... Processing triggers for libc-bin (2.41-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-6 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-riscv64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-riscv64-cross_14.2.0-19cross1 linux-libc-dev_6.12.21-1 Package versions: adduser_3.150 apt_2.9.35 apt-utils_2.9.35 autoconf_2.72-3 automake_1:1.17-4 autopoint_0.23.1-1 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-1.1+b2 bc_1.07.1-4 binutils_2.44-3 binutils-common_2.44-3 binutils-riscv64-linux-gnu_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-3 bsdutils_1:2.41-3 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-riscv64-linux-gnu_14.2.0-19cross1 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-riscv64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-riscv64_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-3 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b1 fakeroot_1.37.1.1-1 file_1:5.46-4 findutils_4.10.0-3 flang-19_1:19.1.7-3 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-riscv64-linux-gnu_14.2.0-19cross1 g++-14-x86-64-linux-gnu_14.2.0-19 g++-riscv64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-riscv64-linux-gnu_14.2.0-19cross1 gcc-14-riscv64-linux-gnu-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-riscv64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 hostname_3.25 ibverbs-providers_56.0-4 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b2 libamdhip64-5_5.7.1-5+b1 libapt-pkg7.0_2.9.35 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-riscv64-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-riscv64-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libbinutils_2.44-3 libblkid1_2.41-3 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-6 libc-dev-bin_2.41-6 libc6_2.41-6 libc6-dev_2.41-6 libc6-dev-riscv64-cross_2.41-6cross2 libc6-riscv64-cross_2.41-6cross2 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-4 libcbor0.10_0.10.2-2 libcc1-0_14.2.0-19 libclang-cpp19_1:19.1.7-3 libcom-err2_1.47.2-1+b1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdpkg-perl_1.22.18 libdrm-amdgpu1_2.4.124-2 libdrm-common_2.4.124-2 libdrm2_2.4.124-2 libedit2_3.1-20250104-1 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libevent-core-2.1-7t64_2.1.12-stable-10+b1 libevent-dev_2.1.12-stable-10+b1 libevent-extra-2.1-7t64_2.1.12-stable-10+b1 libevent-openssl-2.1-7t64_2.1.12-stable-10+b1 libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1 libfabric1_2.0.0-4 libfakeroot_1.37.1.1-1 libffi8_3.4.7-1 libfido2-1_1.15.0-1+b1 libfile-stripnondeterminism-perl_1.14.1-2 libflang-19-dev_1:19.1.7-3 libfuse3-4_3.17.1-1 libgcc-14-dev_14.2.0-19 libgcc-14-dev-riscv64-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-riscv64-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-3 libgomp1_14.2.0-19 libgomp1-riscv64-cross_14.2.0-19cross1 libgprofng0_2.44-3 libgssapi-krb5-2_1.21.3-5 libhogweed6t64_3.10.1-1 libhsa-runtime64-1_6.1.2-3 libhsakmt1_6.2.4+ds-1 libhwasan0_14.2.0-19 libhwloc-dev_2.12.0-1 libhwloc-plugins_2.12.0-1 libhwloc15_2.12.0-1 libibmad5_56.0-4 libibumad3_56.0-4 libibverbs-dev_56.0-4 libibverbs1_56.0-4 libisl23_0.27-1 libitm1_14.2.0-19 libitm1-riscv64-cross_14.2.0-19cross1 libjansson4_2.14-2+b3 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libk5crypto3_1.21.3-5 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-5 libkrb5support0_1.21.3-5 liblastlog2-2_2.41-3 libllvm17t64_1:17.0.6-21+b1 libllvm19_1:19.1.7-3 liblsan0_14.2.0-19 liblsan0-riscv64-cross_14.2.0-19cross1 libltdl-dev_2.5.4-4 libltdl7_2.5.4-4 liblz4-1_1.10.0-4 liblzma5_5.6.4-1 libmagic-mgc_1:5.46-4 libmagic1t64_1:5.46-4 libmd0_1.1.0-2+b1 libmount1_2.41-3 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libmunge2_0.5.16-1 libncl-dev_2.1.21+git20210811.b1213a7-6 libncl2_2.1.21+git20210811.b1213a7-6 libnettle8t64_3.10.1-1 libnl-3-200_3.7.0-2 libnl-3-dev_3.7.0-2 libnl-route-3-200_3.7.0-2 libnl-route-3-dev_3.7.0-2 libnuma-dev_2.0.18-1+b1 libnuma1_2.0.18-1+b1 libopenmpi-dev_5.0.7-1 libopenmpi40_5.0.7-1 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpciaccess0_0.17-3+b3 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-2 libpipeline1_1.5.8-1 libpmix-dev_5.0.7-1 libpmix2t64_5.0.7-1 libpsm2-2_11.2.185-2.1 libquadmath0_14.2.0-19 librdmacm1t64_56.0-4 libreadline8t64_8.2-6 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsepol2_3.8.1-1 libsframe1_2.44-3 libsmartcols1_2.41-3 libsqlite3-0_3.46.1-2 libssl3t64_3.4.1-1 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-riscv64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-riscv64-cross_14.2.0-19cross1 libsystemd0_257.4-9 libtinfo6_6.5+20250216-2 libtool_2.5.4-4 libtsan2_14.2.0-19 libtsan2-riscv64-cross_14.2.0-19cross1 libubsan1_14.2.0-19 libubsan1-riscv64-cross_14.2.0-19cross1 libuchardet0_0.0.8-1+b2 libucx0_1.18.1+ds-2+b1 libudev1_257.4-9 libunistring5_1.3-2 libuuid1_2.41-3 libx11-6_2:1.8.12-1 libx11-data_2:1.8.12-1 libxau6_1:1.0.11-1 libxcb1_1.17.0-2+b1 libxdmcp6_1:1.1.5-1 libxext6_2:1.3.4-1+b3 libxml2_2.12.7+dfsg+really2.9.14-0.4 libxnvctrl0_535.171.04-1+b2 libxxhash0_0.8.3-2 libz3-4_4.13.3-1 libzstd1_1.5.7+dfsg-1 linux-libc-dev_6.12.21-1 linux-libc-dev-riscv64-cross_6.12.17-1cross2 login_1:4.16.0-2+really2.41-3 login.defs_1:4.17.3-3 m4_1.4.19-7 make_4.4.1-1 man-db_2.13.0-1 mawk_1.3.4.20250131-1 mount_2.41-3 mpi-default-dev_1.18 ncl-tools_2.1.21+git20210811.b1213a7-6 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 ocl-icd-libopencl1_2.3.2-1+b2 openmpi-bin_5.0.7-1 openmpi-common_5.0.7-1 openssh-client_1:9.9p2-2 openssl-provider-legacy_3.4.1-1 passwd_1:4.17.3-3 patch_2.7.6-7 perl_5.40.1-2 perl-base_5.40.1-2 perl-modules-5.40_5.40.1-2 po-debconf_1.0.21+nmu1 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sqv_1.3.0-1 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-1 util-linux_2.41-3 xz-utils_5.6.4-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: garli Binary: garli, garli-mpi, garli-examples Architecture: any all Version: 2.1-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/Ashod/garli Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/garli Vcs-Git: https://salsa.debian.org/med-team/garli.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libncl-dev, mpi-default-dev, ncl-tools, bc Package-List: garli deb science optional arch=any garli-examples deb science optional arch=all garli-mpi deb science optional arch=any Checksums-Sha1: a7a5cb81f92ed19672324b5aacf8c7da1f6a2df3 1248730 garli_2.1.orig.tar.gz 03357cb420644769d7123b89aeb933dca5f02fc6 5072 garli_2.1-9.debian.tar.xz Checksums-Sha256: 00aa31af5d8ecc2cb9bd276ce93b6580ae6cff93f4f5e1145d95d5fe6359e1b6 1248730 garli_2.1.orig.tar.gz 11ae86ea4dcf9b875b85761819eb466c627e32912073a5dc08c28f19cea8e0af 5072 garli_2.1-9.debian.tar.xz Files: 83d6720df816365182291306383d056c 1248730 garli_2.1.orig.tar.gz c01e4bc42638d26bb8ef30388b77a867 5072 garli_2.1-9.debian.tar.xz Dgit: 81831dac4c7f11278ba4d060cc3632f00bf4ccc2 debian archive/debian/2.1-9 https://git.dgit.debian.org/garli -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmdkfooUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdq2ghAAr/k4+RQEPAaE17wimNfH2ot8xnhD bex0rBkdzNEeP31Rzp48RuSw0ea6z7GQOIkfE81cFOmRbhx02AnKU0nW4ooeHMof Uc7FsLpf99CeMY4QOM0vgpeGhBRytUWTJOB5uigqJhic22WzOD1/8lFUwHVY9lKw 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CONFIG_SITE=/etc/dpkg-cross/cross-config.riscv64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.94B75PQXlC/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-5ac12e91-520a-460b-9244-edabcadd7c53 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ariscv64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package garli dpkg-buildpackage: info: source version 2.1-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type riscv64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: couldn't open directory 'config/m4': No such file or directory configure.ac:8: warning: The macro 'AC_CONFIG_HEADER' is obsolete. configure.ac:8: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:8: the top level configure.ac:47: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:47: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:47: the top level configure.ac:64: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:64: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:64: the top level configure.ac:68: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:68: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:68: the top level configure.ac:80: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:80: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:80: the top level configure.ac:92: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:92: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:92: the top level configure.ac:104: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:104: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:104: the top level configure.ac:113: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:113: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:113: the top level configure.ac:122: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:122: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:122: the top level configure.ac:131: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:131: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:131: the top level configure.ac:140: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:140: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:140: the top level configure.ac:224: warning: The macro 'AC_TRY_COMPILE' is obsolete. configure.ac:224: You should run autoupdate. ./lib/autoconf/general.m4:2845: AC_TRY_COMPILE is expanded from... config/acx_mpi.m4:74: ACX_MPI is expanded from... configure.ac:224: the top level configure.ac:249: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:249: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:249: the top level configure.ac:280: warning: The macro 'AC_HELP_STRING' is obsolete. configure.ac:280: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... configure.ac:280: the top level configure.ac:339: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:339: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... configure.ac:339: the top level configure.ac:349: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:349: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... configure.ac:349: the top level configure.ac:355: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ./lib/autoconf/lang.m4:199: AC_LANG_CONFTEST is expanded from... ./lib/autoconf/general.m4:2821: _AC_COMPILE_IFELSE is expanded from... ./lib/autoconf/general.m4:2837: AC_COMPILE_IFELSE is expanded from... configure.ac:355: the top level configure.ac:25: warning: support for distribution archives compressed with legacy program 'compress' is deprecated. configure.ac:25: It will be removed in Automake 2.0 debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' # First build MPI version of Garli dh_auto_configure -- --with-ncl=/usr --enable-mpi ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/riscv64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=riscv64-linux-gnu --with-ncl=/usr --enable-mpi checking build system type... x86_64-pc-linux-gnu checking host system type... riscv64-unknown-linux-gnu checking target system type... riscv64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for riscv64-linux-gnu-strip... riscv64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '1000' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking for riscv64-linux-gnu-gcc... riscv64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether riscv64-linux-gnu-gcc accepts -g... yes checking for riscv64-linux-gnu-gcc option to enable C11 features... none needed checking whether riscv64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of riscv64-linux-gnu-gcc... none checking how to run the C preprocessor... riscv64-linux-gnu-gcc -E checking for riscv64-linux-gnu-g++... riscv64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether riscv64-linux-gnu-g++ accepts -g... yes checking for riscv64-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of riscv64-linux-gnu-g++... none checking for riscv64-linux-gnu-ranlib... riscv64-linux-gnu-ranlib checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for float.h... yes checking for malloc.h... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for sys/time.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99 or later... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for error_at_line... yes checking for GNU libc compatible malloc... yes checking for working strtod... no checking for pow... no checking for pow in -lm... yes checking for floor... no checking for memmove... yes checking for memset... yes checking for pow... (cached) no checking for sqrt... no checking for strchr... yes checking for strdup... yes checking for strtol... yes configure: *** NOTE: compiling MPI run distributing version checking for mpic++... mpic++ checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: error: Problem with link flags. Most likely a library cannot be found. Check that any libraries listed below can be found in a system default location or a location specified in LDFLAGS with a -L. LIBS= -lncl LDFLAGS=-Wl,-z,relro -Wl,-z,now -L/usr/lib tail -v -n \+0 config.log ==> config.log <== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by Garli configure 2.1, which was generated by GNU Autoconf 2.72. Invocation command line was $ ./configure --build=x86_64-linux-gnu --prefix=/usr '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules '--libdir=${prefix}/lib/riscv64-linux-gnu' --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=riscv64-linux-gnu --with-ncl=/usr --enable-mpi ## --------- ## ## Platform. ## ## --------- ## hostname = debian-ci-siliconvalley uname -m = x86_64 uname -r = 6.1.0-31-amd64 uname -s = Linux uname -v = #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin/ PATH: /usr/local/bin/ PATH: /usr/sbin/ PATH: /usr/bin/ PATH: /sbin/ PATH: /bin/ PATH: /usr/games/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:2889: looking for aux files: compile missing install-sh config.guess config.sub configure:2902: trying ./config/ configure:2931: ./config/compile found configure:2931: ./config/missing found configure:2913: ./config/install-sh found configure:2931: ./config/config.guess found configure:2931: ./config/config.sub found configure:3062: checking build system type configure:3078: result: x86_64-pc-linux-gnu configure:3098: checking host system type configure:3113: result: riscv64-unknown-linux-gnu configure:3133: checking target system type configure:3148: result: riscv64-unknown-linux-gnu configure:3198: checking for a BSD-compatible install configure:3272: result: /usr/bin/install -c configure:3283: checking whether sleep supports fractional seconds configure:3299: result: yes configure:3302: checking filesystem timestamp resolution configure:3437: result: 0.01 configure:3442: checking whether build environment is sane configure:3483: result: yes configure:3549: checking for riscv64-linux-gnu-strip configure:3570: found /usr/bin/riscv64-linux-gnu-strip configure:3582: result: riscv64-linux-gnu-strip configure:3654: checking for a race-free mkdir -p configure:3697: result: /usr/bin/mkdir -p configure:3704: checking for gawk configure:3740: result: no configure:3704: checking for mawk configure:3725: found /usr/bin/mawk configure:3737: result: mawk configure:3748: checking whether make sets $(MAKE) configure:3772: result: yes configure:3798: checking whether make supports nested variables configure:3817: result: yes configure:3831: checking xargs -n works configure:3847: result: yes configure:3932: checking whether UID '1000' is supported by ustar format configure:3938: result: yes configure:3945: checking whether GID '1000' is supported by ustar format configure:3951: result: yes configure:3959: checking how to create a ustar tar archive configure:3970: tar --version tar (GNU tar) 1.35 Copyright (C) 2023 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:3973: $? = 0 configure:4013: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:4016: $? = 0 configure:4020: tar -xf - &5 riscv64-linux-gnu-gcc (Debian 14.2.0-19) 14.2.0 Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4557: $? = 0 configure:4546: riscv64-linux-gnu-gcc -v >&5 Using built-in specs. COLLECT_GCC=riscv64-linux-gnu-gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc-cross/riscv64-linux-gnu/14/lto-wrapper Target: riscv64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 14.2.0-19' --with-bugurl=file:///usr/share/doc/gcc-14/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-14 --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --disable-multilib --with-arch=rv64gc --with-abi=lp64d --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=riscv64-linux-gnu --program-prefix=riscv64-linux-gnu- --includedir=/usr/riscv64-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-serialization=3 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 14.2.0 (Debian 14.2.0-19) configure:4557: $? = 0 configure:4546: riscv64-linux-gnu-gcc -V >&5 riscv64-linux-gnu-gcc: error: unrecognized command-line option '-V' riscv64-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:4557: $? = 1 configure:4546: riscv64-linux-gnu-gcc -qversion >&5 riscv64-linux-gnu-gcc: error: unrecognized command-line option '-qversion'; did you mean '--version'? riscv64-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:4557: $? = 1 configure:4546: riscv64-linux-gnu-gcc -version >&5 riscv64-linux-gnu-gcc: error: unrecognized command-line option '-version' riscv64-linux-gnu-gcc: fatal error: no input files compilation terminated. configure:4557: $? = 1 configure:4577: checking whether the C compiler works configure:4599: riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 configure:4603: $? = 0 configure:4654: result: yes configure:4658: checking for C compiler default output file name configure:4660: result: a.out configure:4666: checking for suffix of executables configure:4673: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 configure:4677: $? = 0 configure:4701: result: configure:4725: checking whether we are cross compiling configure:4763: result: yes configure:4769: checking for suffix of object files configure:4792: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4796: $? = 0 configure:4820: result: o configure:4824: checking whether the compiler supports GNU C configure:4844: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4844: $? = 0 configure:4856: result: yes configure:4867: checking whether riscv64-linux-gnu-gcc accepts -g configure:4888: riscv64-linux-gnu-gcc -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4888: $? = 0 configure:4935: result: yes configure:4955: checking for riscv64-linux-gnu-gcc option to enable C11 features configure:4970: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:4970: $? = 0 configure:4989: result: none needed configure:5113: checking whether riscv64-linux-gnu-gcc understands -c and -o together configure:5136: riscv64-linux-gnu-gcc -c conftest.c -o conftest2.o configure:5139: $? = 0 configure:5136: riscv64-linux-gnu-gcc -c conftest.c -o conftest2.o configure:5139: $? = 0 configure:5152: result: yes configure:5172: checking whether make supports the include directive configure:5187: make -f confmf.GNU && cat confinc.out make[2]: Entering directory '/<>' make[2]: Leaving directory '/<>' this is the am__doit target configure:5190: $? = 0 configure:5209: result: yes (GNU style) configure:5235: checking dependency style of riscv64-linux-gnu-gcc configure:5348: result: none configure:5368: checking how to run the C preprocessor configure:5394: riscv64-linux-gnu-gcc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:5394: $? = 0 configure:5410: riscv64-linux-gnu-gcc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:5410: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | /* end confdefs.h. */ | #include configure:5439: result: riscv64-linux-gnu-gcc -E configure:5453: riscv64-linux-gnu-gcc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c configure:5453: $? = 0 configure:5469: riscv64-linux-gnu-gcc -E -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c conftest.c:11:10: fatal error: ac_nonexistent.h: No such file or directory 11 | #include | ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:5469: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | /* end confdefs.h. */ | #include configure:5522: checking for riscv64-linux-gnu-g++ configure:5543: found /usr/bin/riscv64-linux-gnu-g++ configure:5555: result: riscv64-linux-gnu-g++ configure:5632: checking for C++ compiler version configure:5641: riscv64-linux-gnu-g++ --version >&5 riscv64-linux-gnu-g++ (Debian 14.2.0-19) 14.2.0 Copyright (C) 2024 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5652: $? = 0 configure:5641: riscv64-linux-gnu-g++ -v >&5 Using built-in specs. COLLECT_GCC=riscv64-linux-gnu-g++ COLLECT_LTO_WRAPPER=/usr/libexec/gcc-cross/riscv64-linux-gnu/14/lto-wrapper Target: riscv64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 14.2.0-19' --with-bugurl=file:///usr/share/doc/gcc-14/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-14 --enable-shared --enable-linker-build-id --libexecdir=/usr/libexec --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-libstdcxx-backtrace --enable-gnu-unique-object --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --disable-multilib --with-arch=rv64gc --with-abi=lp64d --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=riscv64-linux-gnu --program-prefix=riscv64-linux-gnu- --includedir=/usr/riscv64-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-serialization=3 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 14.2.0 (Debian 14.2.0-19) configure:5652: $? = 0 configure:5641: riscv64-linux-gnu-g++ -V >&5 riscv64-linux-gnu-g++: error: unrecognized command-line option '-V' riscv64-linux-gnu-g++: fatal error: no input files compilation terminated. configure:5652: $? = 1 configure:5641: riscv64-linux-gnu-g++ -qversion >&5 riscv64-linux-gnu-g++: error: unrecognized command-line option '-qversion'; did you mean '--version'? riscv64-linux-gnu-g++: fatal error: no input files compilation terminated. configure:5652: $? = 1 configure:5656: checking whether the compiler supports GNU C++ configure:5676: riscv64-linux-gnu-g++ -c -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:5676: $? = 0 configure:5688: result: yes configure:5699: checking whether riscv64-linux-gnu-g++ accepts -g configure:5720: riscv64-linux-gnu-g++ -c -g -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 configure:5720: $? = 0 configure:5767: result: yes configure:5787: checking for riscv64-linux-gnu-g++ option to enable C++11 features configure:5802: riscv64-linux-gnu-g++ -c -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.cpp >&5 conftest.cpp: In function 'int main(int, char**)': conftest.cpp:177:25: warning: empty parentheses were disambiguated as a function declaration [-Wvexing-parse] 177 | cxx11test::delegate d2(); | ^~ conftest.cpp:177:25: note: remove parentheses to default-initialize a variable 177 | cxx11test::delegate d2(); | ^~ | -- conftest.cpp:177:25: note: or replace parentheses with braces to value-initialize a variable configure:5802: $? = 0 configure:5821: result: none needed configure:5892: checking dependency style of riscv64-linux-gnu-g++ configure:6005: result: none configure:6028: checking for riscv64-linux-gnu-ranlib configure:6049: found /usr/bin/riscv64-linux-gnu-ranlib configure:6061: result: riscv64-linux-gnu-ranlib configure:6142: checking for stdio.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for stdlib.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for string.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for inttypes.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for stdint.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for strings.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for sys/stat.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for sys/types.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6142: checking for unistd.h configure:6142: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6142: $? = 0 configure:6142: result: yes configure:6167: checking for grep that handles long lines and -e configure:6233: result: /usr/bin/grep configure:6241: checking for egrep configure:6311: result: /usr/bin/grep -E configure:6319: checking for float.h configure:6319: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6319: $? = 0 configure:6319: result: yes configure:6325: checking for malloc.h configure:6325: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6325: $? = 0 configure:6325: result: yes configure:6331: checking for stddef.h configure:6331: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6331: $? = 0 configure:6331: result: yes configure:6337: checking for stdlib.h configure:6337: result: yes configure:6343: checking for sys/time.h configure:6343: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6343: $? = 0 configure:6343: result: yes configure:6352: checking for _Bool configure:6352: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6352: $? = 0 configure:6352: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c: In function 'main': conftest.c:57:20: error: expected expression before ')' token 57 | if (sizeof ((_Bool))) | ^ configure:6352: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:6352: result: yes configure:6361: checking for stdbool.h that conforms to C99 or later configure:6436: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6436: $? = 0 configure:6446: result: yes configure:6455: checking for an ANSI C-conforming const configure:6522: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6522: $? = 0 configure:6532: result: yes configure:6540: checking for inline configure:6557: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6557: $? = 0 configure:6567: result: inline configure:6585: checking for size_t configure:6585: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6585: $? = 0 configure:6585: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 conftest.c: In function 'main': conftest.c:59:21: error: expected expression before ')' token 59 | if (sizeof ((size_t))) | ^ configure:6585: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_STDIO_H | # include | #endif | #ifdef HAVE_STDLIB_H | # include | #endif | #ifdef HAVE_STRING_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main (void) | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:6585: result: yes configure:6596: checking whether struct tm is in sys/time.h or time.h configure:6617: riscv64-linux-gnu-gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 conftest.c >&5 configure:6617: $? = 0 configure:6627: result: time.h configure:6637: checking for error_at_line configure:6654: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 configure:6654: $? = 0 configure:6665: result: yes configure:6676: checking for GNU libc compatible malloc configure:6722: result: yes configure:6745: checking for working strtod configure:6799: result: no configure:6808: checking for pow configure:6808: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:45:6: warning: conflicting types for built-in function 'pow'; expected 'double(double, double)' [-Wbuiltin-declaration-mismatch] 45 | char pow (void); | ^~~ conftest.c:37:1: note: 'pow' is declared in header '' 36 | #include 37 | #undef pow /usr/lib/gcc-cross/riscv64-linux-gnu/14/../../../../riscv64-linux-gnu/bin/ld: /tmp/cc0SNDU0.o: in function `main': ././conftest.c:56:(.text.startup+0x4): undefined reference to `pow' collect2: error: ld returned 1 exit status configure:6808: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | /* end confdefs.h. */ | /* Define pow to an innocuous variant, in case declares pow. | For example, HP-UX 11i declares gettimeofday. */ | #define pow innocuous_pow | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char pow (void); below. */ | | #include | #undef pow | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char pow (void); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_pow || defined __stub___pow | choke me | #endif | | int | main (void) | { | return pow (); | ; | return 0; | } configure:6808: result: no configure:6815: checking for pow in -lm configure:6844: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c -lm >&5 conftest.c:39:6: warning: conflicting types for built-in function 'pow'; expected 'double(double, double)' [-Wbuiltin-declaration-mismatch] 39 | char pow (void); | ^~~ conftest.c:1:1: note: 'pow' is declared in header '' 1 | /* confdefs.h */ configure:6844: $? = 0 configure:6856: result: yes configure:6871: checking for floor configure:6871: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:45:6: warning: conflicting types for built-in function 'floor'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 45 | char floor (void); | ^~~~~ conftest.c:37:1: note: 'floor' is declared in header '' 36 | #include 37 | #undef floor /usr/lib/gcc-cross/riscv64-linux-gnu/14/../../../../riscv64-linux-gnu/bin/ld: /tmp/ccZ6CNL9.o: in function `main': ././conftest.c:56:(.text.startup+0x4): undefined reference to `floor' collect2: error: ld returned 1 exit status configure:6871: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | /* end confdefs.h. */ | /* Define floor to an innocuous variant, in case declares floor. | For example, HP-UX 11i declares gettimeofday. */ | #define floor innocuous_floor | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char floor (void); below. */ | | #include | #undef floor | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char floor (void); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_floor || defined __stub___floor | choke me | #endif | | int | main (void) | { | return floor (); | ; | return 0; | } configure:6871: result: no configure:6877: checking for memmove configure:6877: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:45:6: warning: conflicting types for built-in function 'memmove'; expected 'void *(void *, const void *, long unsigned int)' [-Wbuiltin-declaration-mismatch] 45 | char memmove (void); | ^~~~~~~ conftest.c:37:1: note: 'memmove' is declared in header '' 36 | #include 37 | #undef memmove configure:6877: $? = 0 configure:6877: result: yes configure:6883: checking for memset configure:6883: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:46:6: warning: conflicting types for built-in function 'memset'; expected 'void *(void *, int, long unsigned int)' [-Wbuiltin-declaration-mismatch] 46 | char memset (void); | ^~~~~~ conftest.c:38:1: note: 'memset' is declared in header '' 37 | #include 38 | #undef memset configure:6883: $? = 0 configure:6883: result: yes configure:6889: checking for pow configure:6889: result: no configure:6895: checking for sqrt configure:6895: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:47:6: warning: conflicting types for built-in function 'sqrt'; expected 'double(double)' [-Wbuiltin-declaration-mismatch] 47 | char sqrt (void); | ^~~~ conftest.c:39:1: note: 'sqrt' is declared in header '' 38 | #include 39 | #undef sqrt /usr/lib/gcc-cross/riscv64-linux-gnu/14/../../../../riscv64-linux-gnu/bin/ld: /tmp/ccva2mvb.o: in function `main': ././conftest.c:58:(.text.startup+0x4): undefined reference to `sqrt' collect2: error: ld returned 1 exit status configure:6895: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | #define HAVE_MEMMOVE 1 | #define HAVE_MEMSET 1 | /* end confdefs.h. */ | /* Define sqrt to an innocuous variant, in case declares sqrt. | For example, HP-UX 11i declares gettimeofday. */ | #define sqrt innocuous_sqrt | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char sqrt (void); below. */ | | #include | #undef sqrt | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char sqrt (void); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_sqrt || defined __stub___sqrt | choke me | #endif | | int | main (void) | { | return sqrt (); | ; | return 0; | } configure:6895: result: no configure:6901: checking for strchr configure:6901: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:47:6: warning: conflicting types for built-in function 'strchr'; expected 'char *(const char *, int)' [-Wbuiltin-declaration-mismatch] 47 | char strchr (void); | ^~~~~~ conftest.c:39:1: note: 'strchr' is declared in header '' 38 | #include 39 | #undef strchr configure:6901: $? = 0 configure:6901: result: yes configure:6907: checking for strdup configure:6907: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 conftest.c:48:6: warning: conflicting types for built-in function 'strdup'; expected 'char *(const char *)' [-Wbuiltin-declaration-mismatch] 48 | char strdup (void); | ^~~~~~ configure:6907: $? = 0 configure:6907: result: yes configure:6913: checking for strtol configure:6913: riscv64-linux-gnu-gcc -o conftest -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.c >&5 configure:6913: $? = 0 configure:6913: result: yes configure:7039: *** NOTE: compiling MPI run distributing version configure:7177: checking for mpic++ configure:7198: found /usr/bin/mpic++ configure:7210: result: mpic++ configure:7228: checking for MPI_Init configure:7228: mpic++ -o conftest -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DUNIX -DNCL_CONST_FUNCS -DNDEBUG -Wno-uninitialized -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp >&5 /usr/bin/ld: cannot find -lmpi: No such file or directory collect2: error: ld returned 1 exit status configure:7228: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | #define HAVE_MEMMOVE 1 | #define HAVE_MEMSET 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | /* Define MPI_Init to an innocuous variant, in case declares MPI_Init. | For example, HP-UX 11i declares gettimeofday. */ | #define MPI_Init innocuous_MPI_Init | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char MPI_Init (void); below. */ | | #include | #undef MPI_Init | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char MPI_Init (void); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_MPI_Init || defined __stub___MPI_Init | choke me | #endif | | int | main (void) | { | return MPI_Init (); | ; | return 0; | } configure:7228: result: no configure:7237: checking for MPI_Init in -lmpi configure:7259: mpic++ -o conftest -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DUNIX -DNCL_CONST_FUNCS -DNDEBUG -Wno-uninitialized -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp -lmpi >&5 /usr/bin/ld: cannot find -lmpi: No such file or directory /usr/bin/ld: cannot find -lmpi: No such file or directory collect2: error: ld returned 1 exit status configure:7259: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | #define HAVE_MEMMOVE 1 | #define HAVE_MEMSET 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int MPI_Init (); | } | int | main (void) | { | return conftest::MPI_Init (); | ; | return 0; | } configure:7271: result: no configure:7280: checking for MPI_Init in -lmpich configure:7302: mpic++ -o conftest -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DUNIX -DNCL_CONST_FUNCS -DNDEBUG -Wno-uninitialized -fsigned-char -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now conftest.cpp -lmpich >&5 /usr/bin/ld: cannot find -lmpich: No such file or directory /usr/bin/ld: cannot find -lmpi: No such file or directory collect2: error: ld returned 1 exit status configure:7302: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | #define HAVE_MEMMOVE 1 | #define HAVE_MEMSET 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | namespace conftest { | extern "C" int MPI_Init (); | } | int | main (void) | { | return conftest::MPI_Init (); | ; | return 0; | } configure:7314: result: no configure:7490: mpic++ -o conftest -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DUNIX -DNCL_CONST_FUNCS -DNDEBUG -Wno-uninitialized -fsigned-char -DSUBROUTINE_GARLI -O3 -ffast-math -funroll-loops -fstrict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/ncl -DIGNORE_NXS_ASSERT -Wl,-z,relro -Wl,-z,now -L/usr/lib conftest.cpp -lncl >&5 /usr/bin/ld: cannot find -lncl: No such file or directory /usr/bin/ld: cannot find -lmpi: No such file or directory collect2: error: ld returned 1 exit status configure:7490: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Garli" | #define PACKAGE_TARNAME "garli" | #define PACKAGE_VERSION "2.1" | #define PACKAGE_STRING "Garli 2.1" | #define PACKAGE_BUGREPORT "garli.support@gmail.com" | #define PACKAGE_URL "" | #define PACKAGE "garli" | #define VERSION "2.1" | #define HAVE_STDIO_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_UNISTD_H 1 | #define STDC_HEADERS 1 | #define HAVE_FLOAT_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_MALLOC 1 | #define HAVE_MEMMOVE 1 | #define HAVE_MEMSET 1 | #define HAVE_STRCHR 1 | #define HAVE_STRDUP 1 | #define HAVE_STRTOL 1 | /* end confdefs.h. */ | | int | main (void) | { | int foo=2; | ; | return 0; | } configure:7494: error: Problem with link flags. Most likely a library cannot be found. Check that any libraries listed below can be found in a system default location or a location specified in LDFLAGS with a -L. LIBS= -lncl LDFLAGS=-Wl,-z,relro -Wl,-z,now -L/usr/lib ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_cxx_compiler_gnu=yes ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2' ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_set=set ac_cv_env_CXXFLAGS_value='-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security' ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-z,relro -Wl,-z,now' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPICXX_set= ac_cv_env_MPICXX_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=riscv64-linux-gnu ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_MPI_Init=no ac_cv_func_floor=no ac_cv_func_malloc_0_nonnull=yes ac_cv_func_memmove=yes ac_cv_func_memset=yes ac_cv_func_pow=no ac_cv_func_sqrt=no ac_cv_func_strchr=yes ac_cv_func_strdup=yes ac_cv_func_strtod=no ac_cv_func_strtol=yes ac_cv_header_float_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_host=riscv64-unknown-linux-gnu ac_cv_lib_error_at_line=yes ac_cv_lib_m_pow=yes ac_cv_lib_mpi_MPI_Init=no ac_cv_lib_mpich_MPI_Init=no ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_EGREP_TRADITIONAL='/usr/bin/grep -E' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=mawk ac_cv_prog_CC=riscv64-linux-gnu-gcc ac_cv_prog_CPP='riscv64-linux-gnu-gcc -E' ac_cv_prog_CXX=riscv64-linux-gnu-g++ ac_cv_prog_MPICXX=mpic++ ac_cv_prog_RANLIB=riscv64-linux-gnu-ranlib ac_cv_prog_STRIP=riscv64-linux-gnu-strip ac_cv_prog_cc_c11= ac_cv_prog_cc_g=yes ac_cv_prog_cc_stdc= ac_cv_prog_cxx_cxx11= ac_cv_prog_cxx_g=yes ac_cv_prog_cxx_stdcxx= ac_cv_prog_make_make_set=yes ac_cv_struct_tm=time.h ac_cv_target=riscv64-unknown-linux-gnu ac_cv_type__Bool=yes ac_cv_type_size_t=yes am_cv_CC_dependencies_compiler_type=none am_cv_CXX_dependencies_compiler_type=none am_cv_filesystem_timestamp_resolution=0.01 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes am_cv_prog_tar_ustar=gnutar am_cv_sleep_fractional_seconds=yes am_cv_xargs_n_works=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} '\''/<>/config/missing'\'' aclocal-1.17' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='#' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='' AM_DEFAULT_VERBOSITY='1' AM_V='' AUTOCONF='${SHELL} '\''/<>/config/missing'\'' autoconf' AUTOHEADER='${SHELL} '\''/<>/config/missing'\'' autoheader' AUTOMAKE='${SHELL} '\''/<>/config/missing'\'' automake-1.17' AWK='mawk' CC='' CCDEPMODE='depmode=none' CFLAGS='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security' CPP='riscv64-linux-gnu-gcc -E' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/ncl -DIGNORE_NXS_ASSERT' CSCOPE='cscope' CTAGS='ctags' CXX='mpic++' CXXDEPMODE='depmode=none' CXXFLAGS='-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DUNIX -DNCL_CONST_FUNCS -DNDEBUG -Wno-uninitialized -fsigned-char -DSUBROUTINE_GARLI -O3 -ffast-math -funroll-loops -fstrict-aliasing' CYGPATH_W='echo' DEFS='' DEPDIR='.deps' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' ETAGS='etags' EXEEXT='' GARLI_LIBS='' GREP='/usr/bin/grep' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LDFLAGS='-Wl,-z,relro -Wl,-z,now -L/usr/lib' LIBOBJS=' strtod.o' LIBS=' -lncl' LN_S='ln -s' LTLIBOBJS='' MAKEINFO='${SHELL} '\''/<>/config/missing'\'' makeinfo' MKDIR_P='/usr/bin/mkdir -p' MPICXX='mpic++' MPILIBS='' NCL_BIN_DIR='/usr/bin' OBJEXT='o' PACKAGE='garli' PACKAGE_BUGREPORT='garli.support@gmail.com' PACKAGE_NAME='Garli' PACKAGE_STRING='Garli 2.1' PACKAGE_TARNAME='garli' PACKAGE_URL='' PACKAGE_VERSION='2.1' PATH_SEPARATOR=':' POW_LIB='-lm' RANLIB='riscv64-linux-gnu-ranlib' SET_MAKE='' SHELL='/bin/bash' STRIP='riscv64-linux-gnu-strip' VERSION='2.1' ac_ct_CC='' ac_ct_CXX='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='#' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='#' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='' am__quote='' am__rm_f_notfound='' am__tar='tar --format=ustar -chf - "$$tardir"' am__untar='tar -xf -' am__xargs_n='xargs -n' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='riscv64-unknown-linux-gnu' host_alias='riscv64-linux-gnu' host_cpu='riscv64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${prefix}/share/info' install_sh='${SHELL} /<>/config/install-sh' libdir='${prefix}/lib/riscv64-linux-gnu' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='/var' mandir='${prefix}/share/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target='riscv64-unknown-linux-gnu' target_alias='' target_cpu='riscv64' target_os='linux-gnu' target_vendor='unknown' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "Garli" #define PACKAGE_TARNAME "garli" #define PACKAGE_VERSION "2.1" #define PACKAGE_STRING "Garli 2.1" #define PACKAGE_BUGREPORT "garli.support@gmail.com" #define PACKAGE_URL "" #define PACKAGE "garli" #define VERSION "2.1" #define HAVE_STDIO_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_STRINGS_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_UNISTD_H 1 #define STDC_HEADERS 1 #define HAVE_FLOAT_H 1 #define HAVE_MALLOC_H 1 #define HAVE_STDDEF_H 1 #define HAVE_STDLIB_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define HAVE_MALLOC 1 #define HAVE_MEMMOVE 1 #define HAVE_MEMSET 1 #define HAVE_STRCHR 1 #define HAVE_STRDUP 1 #define HAVE_STRTOL 1 configure: exit 1 dh_auto_configure: error: ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/riscv64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=riscv64-linux-gnu --with-ncl=/usr --enable-mpi returned exit code 1 make[1]: *** [debian/rules:12: override_dh_auto_configure] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:8: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2025-04-03T09:29:13Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 8 Distribution: unstable Fail-Stage: build Foreign Architectures: riscv64 Host Architecture: riscv64 Install-Time: 21 Job: garli_2.1-9 Machine Architecture: amd64 Package: garli Package-Time: 40 Source-Version: 2.1-9 Space: n/a Status: attempted Version: 2.1-9 -------------------------------------------------------------------------------- Finished at 2025-04-03T09:29:13Z Build needed 00:00:40, no disk space