sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +=======================================================================================+ | gatb-core 1.4.1+git20191209.9398f28+dfsg-3 (mips64el) Wed, 04 Mar 2020 13:29:19 +0000 | +=======================================================================================+ Package: gatb-core Version: 1.4.1+git20191209.9398f28+dfsg-3 Source Version: 1.4.1+git20191209.9398f28+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-9052a572-436f-477b-8729-c12446c61bbd' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-o7KMmv/resolver-t78BBW' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [142 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-04-0813.35.pdiff [3839 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-04-0813.35.pdiff [5330 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-04-0813.35.pdiff [3839 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-04-0813.35.pdiff [5330 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [7935 kB] Fetched 8143 kB in 2s (4928 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'gatb-core' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gatb-core.git Please use: git clone https://salsa.debian.org/med-team/gatb-core.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3048 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main gatb-core 1.4.1+git20191209.9398f28+dfsg-3 (dsc) [2435 B] Get:2 http://debian.oregonstate.edu/debian unstable/main gatb-core 1.4.1+git20191209.9398f28+dfsg-3 (tar) [2945 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main gatb-core 1.4.1+git20191209.9398f28+dfsg-3 (diff) [101 kB] Fetched 3048 kB in 0s (78.5 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/gatb-core-o7KMmv/gatb-core-1.4.1+git20191209.9398f28+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-o7KMmv' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 12), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [452 B] Get:5 copy:/<>/apt_archive ./ Packages [542 B] Fetched 1951 B in 0s (96.1 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cmake cmake-data cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dpkg-cross dwz file fontconfig fontconfig-config fonts-dejavu-core g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base graphviz groff-base hdf5-helpers:mips64el intltool-debian libaec-dev:mips64el libaec0:mips64el libann0 libarchive-zip-perl libarchive13 libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost1.67-dev:mips64el libbrotli1 libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcairo2 libcdt5 libcgraph6 libclang1-9 libconfig-auto-perl libconfig-inifiles-perl libcppunit-1.15-0:mips64el libcppunit-dev:mips64el libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl4 libdatrie1 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libgd3 libgfortran5:mips64el libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libgraphite2-3 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103:mips64el libhdf5-cpp-103:mips64el libhdf5-dev:mips64el libice6 libicu63 libio-string-perl libjbig0 libjpeg62-turbo libjpeg62-turbo:mips64el libjpeg62-turbo-dev:mips64el libjsoncpp-dev:mips64el libjsoncpp1 libjsoncpp1:mips64el libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm9 liblocale-gettext-perl libltdl7 libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libsz2:mips64el libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-perl libz3-4 linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf procps sensible-utils ucf x11-common zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation cmake-doc ninja-build gcc-9-locales cpp-doc dh-make doxygen-latex doxygen-doc doxygen-gui binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mips64el-linux-gnuabi64 gcc-9-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc:mips64el libboost1.67-doc:mips64el libboost-atomic1.67-dev:mips64el libboost-chrono1.67-dev:mips64el libboost-container1.67-dev:mips64el libboost-contract1.67-dev:mips64el libboost-date-time1.67-dev:mips64el libboost-exception1.67-dev:mips64el libboost-filesystem1.67-dev:mips64el libboost-graph1.67-dev:mips64el libboost-graph-parallel1.67-dev:mips64el libboost-iostreams1.67-dev:mips64el libboost-locale1.67-dev:mips64el libboost-log1.67-dev:mips64el libboost-math1.67-dev:mips64el libboost-mpi1.67-dev:mips64el libboost-mpi-python1.67-dev:mips64el libboost-numpy1.67-dev:mips64el libboost-program-options1.67-dev:mips64el libboost-python1.67-dev:mips64el libboost-random1.67-dev:mips64el libboost-regex1.67-dev:mips64el libboost-serialization1.67-dev:mips64el libboost-signals1.67-dev:mips64el libboost-stacktrace1.67-dev:mips64el libboost-system1.67-dev:mips64el libboost-test1.67-dev:mips64el libboost-thread1.67-dev:mips64el libboost-timer1.67-dev:mips64el libboost-type-erasure1.67-dev:mips64el libboost-wave1.67-dev:mips64el libboost1.67-tools-dev:mips64el libmpfrc++-dev:mips64el libntl-dev:mips64el glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el libcppunit-doc:mips64el libgd-tools krb5-doc krb5-user libhdf5-doc:mips64el libstdc++-9-doc libstdc++-9-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation libidn2-0:mips64el ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cmake cmake-data cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dpkg-cross dwz file fontconfig fontconfig-config fonts-dejavu-core g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base graphviz groff-base hdf5-helpers:mips64el intltool-debian libaec-dev:mips64el libaec0:mips64el libann0 libarchive-zip-perl libarchive13 libatomic1:mips64el libatomic1-mips64el-cross libboost-dev:mips64el libboost1.67-dev:mips64el libbrotli1 libbsd0 libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcairo2 libcdt5 libcgraph6 libclang1-9 libconfig-auto-perl libconfig-inifiles-perl libcppunit-1.15-0:mips64el libcppunit-dev:mips64el libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl4 libdatrie1 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libexpat1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libgd3 libgfortran5:mips64el libglib2.0-0 libgomp1:mips64el libgomp1-mips64el-cross libgraphite2-3 libgssapi-krb5-2 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103:mips64el libhdf5-cpp-103:mips64el libhdf5-dev:mips64el libice6 libicu63 libio-string-perl libjbig0 libjpeg62-turbo libjpeg62-turbo:mips64el libjpeg62-turbo-dev:mips64el libjsoncpp-dev:mips64el libjsoncpp1 libjsoncpp1:mips64el libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblab-gamut1 libldap-2.4-2 libldap-common libllvm9 liblocale-gettext-perl libltdl7 libmagic-mgc libmagic1 libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libsz2:mips64el libthai-data libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-perl libz3-4 linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:mips64el sensible-utils ucf x11-common zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 188 newly installed, 0 to remove and 0 not upgraded. Need to get 150 MB of archives. After this operation, 710 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [968 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10-20200222-1 [195 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-9-base mips64el 9.2.1-30 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2-1 [102 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-3 [62.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-3 [262 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.34-2cross5 [2313 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.15-1 [104 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.29-10 [2638 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.2.1-30 [1697 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.2.1-30 [10.7 MB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.16.3-1 [1628 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.0-1+b1 [335 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-6 [266 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-2 [1540 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.49+dfsg-1 [91.9 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.49+dfsg-1 [226 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.40.0-1 [85.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.68.0-1 [321 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.9-1 [123 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.34.2-1 [127 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.16.3-1 [3673 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64-base amd64 9.2.1-24cross1 [195 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6464 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [16.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.2.1-24cross1 [191 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.29-8cross1 [1324 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips64el-cross all 1:9.2.1-24cross1 [69.2 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 9.2.1-24cross1 [76.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 9.2.1-24cross1 [7436 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mips64el-cross all 9.2.1-24cross1 [247 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6811 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1484 B] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 9.2.1-24cross1 [398 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.4.8-1cross1 [1139 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.29-8cross1 [2456 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mips64el-cross all 9.2.1-24cross1 [1725 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [7046 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1192 B] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.88 [17.4 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.9 [183 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-2 [104 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.5-1 [1320 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.9 [994 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 libedit2 amd64 3.1-20191231-1 [95.4 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libz3-4 amd64 4.8.7-4 [6790 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 libllvm9 amd64 1:9.0.1-8+b1 [15.0 MB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 libclang1-9 amd64 1:9.0.1-8+b1 [6718 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main amd64 libxapian30 amd64 1.4.14-2 [1085 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main amd64 doxygen amd64 1.8.16-2 [9455 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main amd64 libpng16-16 amd64 1.6.37-2 [292 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libfreetype6 amd64 2.10.1-2 [392 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libfontconfig1 amd64 2.13.1-2+b1 [347 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main amd64 fontconfig amd64 2.13.1-2+b1 [405 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main amd64 libann0 amd64 1.1.2+doc-7 [25.3 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main amd64 libcdt5 amd64 2.42.2-3+b2 [60.9 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main amd64 libcgraph6 amd64 2.42.2-3+b2 [85.2 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main amd64 libwebp6 amd64 0.6.1-2+b1 [261 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main amd64 libtiff5 amd64 4.1.0+git191117-2 [271 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb1 amd64 1.13.1-5 [137 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-data all 2:1.6.9-2 [298 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main amd64 libx11-6 amd64 2:1.6.9-2 [759 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main amd64 libgd3 amd64 2.2.5-5.2 [136 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4+b1 [158 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-render0 amd64 1.13.1-5 [109 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main amd64 libxcb-shm0 amd64 1.13.1-5 [99.3 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main amd64 libltdl7 amd64 2.4.6-14 [390 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main amd64 libfribidi0 amd64 1.0.8-2 [64.8 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main amd64 libdatrie1 amd64 0.2.12-3 [39.5 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main amd64 libpango-1.0-0 amd64 1.42.4-8 [186 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main amd64 libgraphite2-3 amd64 1.3.13-11 [80.9 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main amd64 libharfbuzz0b amd64 2.6.4-1 [1360 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.42.4-8 [68.2 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.42.4-8 [55.7 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main amd64 libpathplan4 amd64 2.42.2-3+b2 [64.2 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main amd64 libgvc6 amd64 2.42.2-3+b2 [693 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main amd64 libgvpr2 amd64 2.42.2-3+b2 [211 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main amd64 liblab-gamut1 amd64 2.42.2-3+b2 [221 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main amd64 x11-common all 1:7.7+20 [252 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main amd64 graphviz amd64 2.42.2-3+b2 [633 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main mips64el hdf5-helpers mips64el 1.10.4+repack-11 [35.2 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10-20200222-1 [69.6 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.15-1 [95.5 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.29-10 [2538 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main mips64el libaec0 mips64el 1.0.4-1 [20.6 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main mips64el libsz2 mips64el 1.0.4-1 [6736 B] Get:166 http://debian.oregonstate.edu/debian unstable/main mips64el libaec-dev mips64el 1.0.4-1 [19.9 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10-20200222-1 [7460 B] Get:168 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10-20200222-1 [89.5 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-9-dev mips64el 9.2.1-30 [247 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10-20200222-1 [434 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.4.19-1 [1068 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.15-1 [118 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.29-10 [2455 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-9-dev mips64el 9.2.1-30 [1730 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main mips64el libboost1.67-dev mips64el 1.67.0-17 [8389 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main mips64el libboost-dev mips64el 1.67.0.2+b1 [4492 B] Get:177 http://debian.oregonstate.edu/debian unstable/main mips64el libcppunit-1.15-0 mips64el 1.15.1-2 [141 kB] Get:178 http://debian.oregonstate.edu/debian unstable/main mips64el libcppunit-dev mips64el 1.15.1-2 [215 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main mips64el libgfortran5 mips64el 10-20200222-1 [301 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-103 mips64el 1.10.4+repack-11 [929 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-cpp-103 mips64el 1.10.4+repack-11 [118 kB] Get:183 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-2 [191 kB] Get:184 http://debian.oregonstate.edu/debian unstable/main mips64el libjpeg62-turbo mips64el 1:1.5.2-2+b1 [139 kB] Get:185 http://debian.oregonstate.edu/debian unstable/main mips64el libjpeg62-turbo-dev mips64el 1:1.5.2-2+b1 [218 kB] Get:186 http://debian.oregonstate.edu/debian unstable/main mips64el libhdf5-dev mips64el 1.10.4+repack-11 [2600 kB] Get:187 http://debian.oregonstate.edu/debian unstable/main mips64el libjsoncpp1 mips64el 1.7.4-3.1 [71.3 kB] Get:188 http://debian.oregonstate.edu/debian unstable/main mips64el libjsoncpp-dev mips64el 1.7.4-3.1 [100 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 150 MB in 2s (81.5 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12785 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../006-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:mips64el. Preparing to unpack .../007-gcc-10-base_10-20200222-1_mips64el.deb ... Unpacking gcc-10-base:mips64el (10-20200222-1) ... Selecting previously unselected package gcc-9-base:mips64el. Preparing to unpack .../008-gcc-9-base_9.2.1-30_mips64el.deb ... Unpacking gcc-9-base:mips64el (9.2.1-30) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../009-libncurses6_6.2-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2-1) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../010-libprocps8_2%3a3.3.16-3_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.16-3) ... Selecting previously unselected package procps. Preparing to unpack .../011-procps_2%3a3.3.16-3_amd64.deb ... Unpacking procps (2:3.3.16-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../012-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../013-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../014-libmagic1_1%3a5.38-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../015-file_1%3a5.38-4_amd64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../016-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../017-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../018-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../019-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../020-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../021-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../022-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../023-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-mips64el-linux-gnuabi64. Preparing to unpack .../024-binutils-mips64el-linux-gnuabi64_2.34-2cross5_amd64.deb ... Unpacking binutils-mips64el-linux-gnuabi64 (2.34-2cross5) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../025-libcrypt-dev_1%3a4.4.15-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.15-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../026-libc6-dev_2.29-10_amd64.deb ... Unpacking libc6-dev:amd64 (2.29-10) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../027-libstdc++-9-dev_9.2.1-30_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.2.1-30) ... Selecting previously unselected package g++-9. Preparing to unpack .../028-g++-9_9.2.1-30_amd64.deb ... Unpacking g++-9 (9.2.1-30) ... Selecting previously unselected package g++. Preparing to unpack .../029-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package build-essential. Preparing to unpack .../030-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package cmake-data. Preparing to unpack .../031-cmake-data_3.16.3-1_all.deb ... Unpacking cmake-data (3.16.3-1) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../032-libicu63_63.2-2_amd64.deb ... Unpacking libicu63:amd64 (63.2-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../033-libxml2_2.9.10+dfsg-4_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-4) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../034-libarchive13_3.4.0-1+b1_amd64.deb ... Unpacking libarchive13:amd64 (3.4.0-1+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../035-libbrotli1_1.0.7-6_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.7-6) ... Selecting previously unselected package libkeyutils1:amd64. 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Setting up libconfig-inifiles-perl (3.000002-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libgraphite2-3:amd64 (1.3.13-11) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up libxapian30:amd64 (1.4.14-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up hdf5-helpers:mips64el (1.10.4+repack-11) ... Setting up libdatrie1:amd64 (0.2.12-3) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-2) ... Setting up libglib2.0-0:amd64 (2.62.5-1) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libdebhelper-perl (12.9) ... Setting up libbrotli1:amd64 (1.0.7-6) ... Setting up liblab-gamut1:amd64 (2.42.2-3+b2) ... Setting up x11-common (1:7.7+20) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libnghttp2-14:amd64 (1.40.0-1) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.2.1-24cross1) ... Setting up linux-libc-dev:mips64el (5.4.19-1) ... Setting up libc6-mips64el-cross (2.29-8cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-cross-base-mipsen (9.2.1-24cross1) ... Setting up libldap-common (2.4.49+dfsg-1) ... Setting up libyaml-perl (1.30-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.34-2cross5) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libkrb5support0:amd64 (1.17-6) ... 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Setting up libfreetype6:amd64 (2.10.1-2) ... Setting up libc6-dev-mips64el-cross (2.29-8cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.2.1-30) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (9.2.1-24cross1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up libgvpr2:amd64 (2.42.2-3+b2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... 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Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up doxygen (1.8.16-2) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.16.3-1) ... 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Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.29-10) ... Setting up libcrypt-dev:mips64el (1:4.4.15-1) ... Setting up libc6-dev:mips64el (2.29-10) ... Setting up libstdc++6:mips64el (10-20200222-1) ... Setting up libjsoncpp1:mips64el (1.7.4-3.1) ... Setting up libcppunit-1.15-0:mips64el (1.15.1-2) ... Setting up libjsoncpp-dev:mips64el (1.7.4-3.1) ... Setting up debhelper (12.9) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libgomp1:mips64el (10-20200222-1) ... Setting up libaec0:mips64el (1.0.4-1) ... Setting up libjpeg62-turbo:mips64el (1:1.5.2-2+b1) ... Setting up libjpeg62-turbo-dev:mips64el (1:1.5.2-2+b1) ... Setting up libatomic1:mips64el (10-20200222-1) ... Setting up libgfortran5:mips64el (10-20200222-1) ... Setting up zlib1g-dev:mips64el (1:1.2.11.dfsg-2) ... Setting up libcppunit-dev:mips64el (1.15.1-2) ... Setting up libsz2:mips64el (1.0.4-1) ... Setting up libaec-dev:mips64el (1.0.4-1) ... Setting up libgcc-9-dev:mips64el (9.2.1-30) ... Setting up libhdf5-103:mips64el (1.10.4+repack-11) ... Setting up libstdc++-9-dev:mips64el (9.2.1-30) ... Setting up libhdf5-cpp-103:mips64el (1.10.4+repack-11) ... Setting up libhdf5-dev:mips64el (1.10.4+repack-11) ... update-alternatives: using /usr/lib/mips64el-linux-gnuabi64/pkgconfig/hdf5-serial.pc to provide /usr/lib/mips64el-linux-gnuabi64/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libboost1.67-dev:mips64el (1.67.0-17) ... Setting up libboost-dev:mips64el (1.67.0.2+b1) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.29-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-4 dpkg-dev_1.19.7 g++-9_9.2.1-30 gcc-8_8.3.0-29 gcc-9_9.2.1-30 libc6-dev_2.29-10 libstdc++-9-dev_9.2.1-30 libstdc++-9-dev-mips64el-cross_9.2.1-24cross1 libstdc++6_10-20200222-1 libstdc++6-mips64el-cross_9.2.1-24cross1 linux-libc-dev_5.4.19-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: gatb-core Binary: gatb-core, libgatbcore3, libgatbcore-dev, gatb-core-testdata Architecture: any all Version: 1.4.1+git20191209.9398f28+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Nadiya Sitdykova , Andreas Tille Homepage: https://github.com/GATB/gatb-core Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/gatb-core Vcs-Git: https://salsa.debian.org/med-team/gatb-core.git Build-Depends: debhelper-compat (= 12), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Package-List: gatb-core deb science optional arch=any gatb-core-testdata deb science optional arch=all libgatbcore-dev deb libdevel optional arch=any libgatbcore3 deb libs optional arch=any Checksums-Sha1: 6580910daec9634673629cfca9f9764f0bee1b87 2944956 gatb-core_1.4.1+git20191209.9398f28+dfsg.orig.tar.xz f5f151df0227bc04a3dffdc09a8e24008941d717 101012 gatb-core_1.4.1+git20191209.9398f28+dfsg-3.debian.tar.xz Checksums-Sha256: 2da66c8a77c255b9ec2670c593bb81b39bbc02bed1d16dc8f0e9afaac843b899 2944956 gatb-core_1.4.1+git20191209.9398f28+dfsg.orig.tar.xz f0f17963c4d5a343f2dc169814424634a8020e7f94e2f0b73d9bbbd085c233b5 101012 gatb-core_1.4.1+git20191209.9398f28+dfsg-3.debian.tar.xz Files: e16685f245c624e516dc4051ffed0a0b 2944956 gatb-core_1.4.1+git20191209.9398f28+dfsg.orig.tar.xz e066161353eaed3e76d4ee76cd2b463a 101012 gatb-core_1.4.1+git20191209.9398f28+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl5KpkoACgkQPCZ2P2xn 5uJs9w//aQbOZyyGS9APvQxnklFUZrivyxyOCSZgdIxHzUiP11QjP+Sq3ItgQaWD uZYFW60LefLk1ldPJZMqaN0uPdbHGCAztTaxLtc2+jep+MUYACgvlOC5UhXDF70P +I1BYTQqZF+8w1gDFJ/6K8vk0Eub7ZvBJN33EdV09kjw5aowz7R3V9/NjisLtu7I 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unpacking gatb-core_1.4.1+git20191209.9398f28+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.1+git20191209.9398f28+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying avoid_-msse Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-9052a572-436f-477b-8729-c12446c61bbd SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.1+git20191209.9398f28+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el fakeroot debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules build-arch dh build-arch --sourcedirectory=gatb-core dh_update_autotools_config -a -O--sourcedirectory=gatb-core dh_autoreconf -a -O--sourcedirectory=gatb-core debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- cd obj-mips64el-linux-gnuabi64 && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=mips64 -DCMAKE_C_COMPILER=mips64el-linux-gnuabi64-gcc -DCMAKE_CXX_COMPILER=mips64el-linux-gnuabi64-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/mips64el-linux-gnuabi64-qmake -DCMAKE_INSTALL_LIBDIR=lib/mips64el-linux-gnuabi64 ../gatb-core -- The C compiler identification is GNU 9.2.1 -- The CXX compiler identification is GNU 9.2.1 -- Check for working C compiler: /usr/bin/mips64el-linux-gnuabi64-gcc -- Check for working C compiler: /usr/bin/mips64el-linux-gnuabi64-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/mips64el-linux-gnuabi64-g++ -- Check for working CXX compiler: /usr/bin/mips64el-linux-gnuabi64-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - done -- Options: -std=c++11 -Wno-invalid-offsetof -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so;/usr/lib/mips64el-linux-gnuabi64/libpthread.so;/usr/lib/mips64el-linux-gnuabi64/libsz.so;/usr/lib/mips64el-linux-gnuabi64/libz.so;/usr/lib/mips64el-linux-gnuabi64/libdl.so;/usr/lib/mips64el-linux-gnuabi64/libm.so (found version "1.10.4") -- HDF5_LIBRARIES="/usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so/usr/lib/mips64el-linux-gnuabi64/libpthread.so/usr/lib/mips64el-linux-gnuabi64/libsz.so/usr/lib/mips64el-linux-gnuabi64/libz.so/usr/lib/mips64el-linux-gnuabi64/libdl.so/usr/lib/mips64el-linux-gnuabi64/libm.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:199 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- Found HDF5: /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so;/usr/lib/mips64el-linux-gnuabi64/libpthread.so;/usr/lib/mips64el-linux-gnuabi64/libsz.so;/usr/lib/mips64el-linux-gnuabi64/libz.so;/usr/lib/mips64el-linux-gnuabi64/libdl.so;/usr/lib/mips64el-linux-gnuabi64/libm.so (found version "1.10.4") found components: C CMake Warning (dev) at CMakeLists.txt:225 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:226 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:227 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:228 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.8.16") found components: doxygen dot -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-mips64el-linux-gnuabi64 make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' dh_auto_build -a cd obj-mips64el-linux-gnuabi64 && make -j1 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<>/gatb-core -B/<>/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles /<>/obj-mips64el-linux-gnuabi64/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/src /<>/obj-mips64el-linux-gnuabi64/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= Scanning dependencies of target gatbcore-dynamic make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 0%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 1%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 4%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 6%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 7%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 8%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 12%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 18%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeNumeric()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:707:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 707 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeDelta()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:727:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 727 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeDelta2()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:746:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 746 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 19%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 21%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 22%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 23%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp [ 26%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp [ 27%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp [ 28%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 28%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 29%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 128]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 32]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 30%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 64]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 96]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 31%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp [ 32%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 33%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 34%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 35%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 36%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 37%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 38%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 38%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 38%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 39%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 40%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 42%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.3 -o ../lib/None/libgatbcore.so.3 CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o 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CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/cmake -E cmake_symlink_library ../lib/None/libgatbcore.so.3 ../lib/None/libgatbcore.so.3 ../lib/None/libgatbcore.so make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 42%] Built target gatbcore-dynamic make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/src /<>/obj-mips64el-linux-gnuabi64/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= Scanning dependencies of target gatbcore-static make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/bank/impl/Bank.cpp:23: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 43%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 48%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 50%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 50%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 51%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 52%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.hpp:25, from /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.hpp:35, from /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:21: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeNumeric()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:707:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 707 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeDelta()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:727:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 727 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp: In member function ‘void HeaderDecoder::decodeDelta2()’: /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp:746:24: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 746 | snprintf(temp,200,"%llu",value); | ~~~^ ~~~~~ | | | | | u_int64_t {aka long unsigned int} | long long unsigned int | %lu [ 62%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/src/gatb/tools/compression/Leon.cpp:23: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /<>/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/api/Data.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/api/Data.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 66%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_32.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_64.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization1.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization1.cpp.in_96.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 128; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_128.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 32; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_32.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 64; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 71%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:8, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In instantiation of ‘uint64_t boomphf::mphf::totalBitSize() [with elem_t = long unsigned int; Hasher_t = gatb::core::debruijn::impl::hasher_t; uint64_t = long unsigned int]’: /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp:812:60: required from ‘void gatb::core::debruijn::impl::bglue(gatb::core::tools::storage::impl::Storage*, std::string, int, int, int, bool, bool) [with long unsigned int SPAN = 96; std::string = std::__cxx11::basic_string]’ /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp:30:9: required from here /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:839:29: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 839 | printf("Bitarray %12llu bits (%.2f %%) (array + ranks )\n", | ~~~~~^ | | | long long unsigned int | %12lu 840 | totalsizeBitset, 100*(float)totalsizeBitset/totalsize); | ~~~~~~~~~~~~~~~ | | | uint64_t {aka long unsigned int} [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 128]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 72%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 32]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 64]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/kmer/impl/CountProcessor.hpp:27, from /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp:5: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp: In instantiation of ‘void gatb::core::kmer::impl::CountProcessorHistogram::end() [with long unsigned int span = 96]’: /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:104:10: required from here /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:122:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 122 | fprintf(histo2Dfile,"\t%6lli", _histogram->get2D(ii,jj)); | ~~~~^ | | | long long int | %6li /<>/gatb-core/src/gatb/kmer/impl/CountProcessorHistogram.hpp:137:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 137 | fprintf(histo1Dfile,"%i\t%lli",ii,_histogram->get(ii)); | ~~~^ | | | long long int | %li [ 73%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 75%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp [ 75%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 76%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 77%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp:6: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 78%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp:5: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 79%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 80%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:21, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp:2: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 81%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 81%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 82%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 83%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 84%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-mips64el-linux-gnuabi64/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 86%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /<>/obj-mips64el-linux-gnuabi64/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-ar qc ../lib/None/libgatbcore.a CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o 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CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o /usr/bin/mips64el-linux-gnuabi64-ranlib ../lib/None/libgatbcore.a make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 86%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/test/unit /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/test/unit /<>/obj-mips64el-linux-gnuabi64/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake --color= Scanning dependencies of target gatb-core-cppunit make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestBank.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestLeon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/src/gatb/tools/compression/Leon.hpp:33, from /<>/gatb-core/test/unit/src/bank/TestLeon.cpp:32: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestSequence.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o -c /<>/gatb-core/test/unit/src/bcalm/TestBcalm.cpp [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestDebruijn.cpp:33: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 88%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestDebruijnUnitigs.cpp:33: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/test/unit/src/debruijn/TestSimplifications.cpp:33: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 89%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o -c /<>/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:27, from /<>/gatb-core/test/unit/src/debruijn/TestSimplificationsUnitigs.cpp:33: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestDSK.cpp [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestDebloom.cpp [ 90%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestKmer.cpp [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestKmerBank.cpp [ 91%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o -c /<>/gatb-core/test/unit/src/kmer/TestMPHF.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/test/unit/src/kmer/TestMPHF.cpp:27: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o -c /<>/gatb-core/test/unit/src/main.cpp [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o -c /<>/gatb-core/test/unit/src/system/TestSystem.cpp [ 92%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestBag.cpp [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestCollection.cpp [ 93%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestContainer.cpp [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestIterable.cpp [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o -c /<>/gatb-core/test/unit/src/tools/collections/TestMap.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/test/unit/src/tools/collections/TestMap.cpp:24: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 94%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o -c /<>/gatb-core/test/unit/src/tools/designpattern/TestIterators.cpp [ 95%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o -c /<>/gatb-core/test/unit/src/tools/math/TestMath.cpp [ 95%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o -c /<>/gatb-core/test/unit/src/tools/misc/TestMisc.cpp [ 96%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -c /<>/gatb-core/test/unit/src/tools/storage/TestStorage.cpp [ 96%] Linking CXX executable ../../bin/None/gatb-core-cppunit cd /<>/obj-mips64el-linux-gnuabi64/test/unit && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatb-core-cppunit.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/bcalm/TestBcalm.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijn.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestDebruijnUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplifications.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/debruijn/TestSimplificationsUnitigs.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDSK.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestDebloom.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestKmerBank.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/kmer/TestMPHF.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/main.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/system/TestSystem.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestBag.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestCollection.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestContainer.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestIterable.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/collections/TestMap.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/designpattern/TestIterators.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/math/TestMath.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/misc/TestMisc.cpp.o CMakeFiles/gatb-core-cppunit.dir/src/tools/storage/TestStorage.cpp.o -o ../../bin/None/gatb-core-cppunit -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial: ../../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so /usr/lib/mips64el-linux-gnuabi64/libpthread.so /usr/lib/mips64el-linux-gnuabi64/libsz.so /usr/lib/mips64el-linux-gnuabi64/libz.so /usr/lib/mips64el-linux-gnuabi64/libdl.so /usr/lib/mips64el-linux-gnuabi64/libm.so /usr/lib/mips64el-linux-gnuabi64/libcppunit.so make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 96%] Built target gatb-core-cppunit make -f tools/CMakeFiles/leon.dir/build.make tools/CMakeFiles/leon.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/tools /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/tools /<>/obj-mips64el-linux-gnuabi64/tools/CMakeFiles/leon.dir/DependInfo.cmake --color= Scanning dependencies of target leon make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f tools/CMakeFiles/leon.dir/build.make tools/CMakeFiles/leon.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 96%] Building CXX object tools/CMakeFiles/leon.dir/leon.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/leon.dir/leon.cpp.o -c /<>/gatb-core/tools/leon.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/tools/leon.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 97%] Linking CXX executable ../bin/None/leon cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/leon.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/leon.dir/leon.cpp.o -o ../bin/None/leon -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so /usr/lib/mips64el-linux-gnuabi64/libpthread.so /usr/lib/mips64el-linux-gnuabi64/libsz.so /usr/lib/mips64el-linux-gnuabi64/libz.so /usr/lib/mips64el-linux-gnuabi64/libdl.so /usr/lib/mips64el-linux-gnuabi64/libm.so make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 97%] Built target leon make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/tools /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/tools /<>/obj-mips64el-linux-gnuabi64/tools/CMakeFiles/dbginfo.dir/DependInfo.cmake --color= Scanning dependencies of target dbginfo make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f tools/CMakeFiles/dbginfo.dir/build.make tools/CMakeFiles/dbginfo.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [ 98%] Building CXX object tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/dbginfo.dir/dbginfo.cpp.o -c /<>/gatb-core/tools/dbginfo.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/tools/dbginfo.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li [ 98%] Linking CXX executable ../bin/None/dbginfo cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbginfo.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/dbginfo.dir/dbginfo.cpp.o -o ../bin/None/dbginfo -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so /usr/lib/mips64el-linux-gnuabi64/libpthread.so /usr/lib/mips64el-linux-gnuabi64/libsz.so /usr/lib/mips64el-linux-gnuabi64/libz.so /usr/lib/mips64el-linux-gnuabi64/libdl.so /usr/lib/mips64el-linux-gnuabi64/libm.so make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 98%] Built target dbginfo make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/tools /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/tools /<>/obj-mips64el-linux-gnuabi64/tools/CMakeFiles/dbgh5.dir/DependInfo.cmake --color= Scanning dependencies of target dbgh5 make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f tools/CMakeFiles/dbgh5.dir/build.make tools/CMakeFiles/dbgh5.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' [100%] Building CXX object tools/CMakeFiles/dbgh5.dir/dbgh5.cpp.o cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/mips64el-linux-gnuabi64-g++ -I/usr/include/hdf5/serial -I/<>/obj-mips64el-linux-gnuabi64/include -I/<>/obj-mips64el-linux-gnuabi64/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -o CMakeFiles/dbgh5.dir/dbgh5.cpp.o -c /<>/gatb-core/tools/dbgh5.cpp In file included from /<>/gatb-core/src/gatb/tools/collections/impl/BooPHF.hpp:33, from /<>/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:43, from /<>/gatb-core/src/gatb/gatb_core.hpp:78, from /<>/gatb-core/tools/dbgh5.cpp:20: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h: In member function ‘void boomphf::bitVector::print() const’: /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:535:33: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 535 | printf("bit array of size %lli: \n",_size); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:539:19: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 539 | printf(" (%llu) ",ii); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:16: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ ~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu /<>/gatb-core/thirdparty/BooPHF/BooPHF.h:548:24: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘__gnu_cxx::__alloc_traits, long unsigned int>::value_type’ {aka ‘long unsigned int’} [-Wformat=] 548 | printf("%llu : %lli, ",ii,_ranks[ii]); | ~~~^ | | | long long int | %li /<>/gatb-core/tools/dbgh5.cpp: In function ‘void sendEmail(gatb::core::tools::misc::IProperties*, gatb::core::tools::misc::IProperties*)’: /<>/gatb-core/tools/dbgh5.cpp:127:13: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 127 | ::system (cmd.str().c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable ../bin/None/dbgh5 cd /<>/obj-mips64el-linux-gnuabi64/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbgh5.dir/link.txt --verbose=1 /usr/bin/mips64el-linux-gnuabi64-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/dbgh5.dir/dbgh5.cpp.o -o ../bin/None/dbgh5 -Wl,-rpath,/usr/lib/mips64el-linux-gnuabi64/hdf5/serial: ../lib/None/libgatbcore.a -ldl -lpthread -lz /usr/lib/mips64el-linux-gnuabi64/hdf5/serial/libhdf5.so /usr/lib/mips64el-linux-gnuabi64/libpthread.so /usr/lib/mips64el-linux-gnuabi64/libsz.so /usr/lib/mips64el-linux-gnuabi64/libz.so /usr/lib/mips64el-linux-gnuabi64/libdl.so /usr/lib/mips64el-linux-gnuabi64/libm.so make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [100%] Built target dbgh5 make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/depend make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/thirdparty /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/thirdparty /<>/obj-mips64el-linux-gnuabi64/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= Scanning dependencies of target thirdparty_copy make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[4]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-mips64el-linux-gnuabi64/include/None/json cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-mips64el-linux-gnuabi64/include/None/BooPHF cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/obj-mips64el-linux-gnuabi64/include/None/BooPHF/ cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/json/json.hpp /<>/obj-mips64el-linux-gnuabi64/include/None/json/ make[4]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [100%] Built target thirdparty_copy make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles 0 make[2]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make[1]: Leaving directory '/<>' dh_auto_test -a -O--sourcedirectory=gatb-core create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --sourcedirectory=gatb-core dh_testroot -a -O--sourcedirectory=gatb-core dh_prep -a -O--sourcedirectory=gatb-core dh_auto_install -a -O--sourcedirectory=gatb-core cd obj-mips64el-linux-gnuabi64 && make -j1 install DESTDIR=/<>/gatb-core-1.4.1\+git20191209.9398f28\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -S/<>/gatb-core -B/<>/obj-mips64el-linux-gnuabi64 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles /<>/obj-mips64el-linux-gnuabi64/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/src /<>/obj-mips64el-linux-gnuabi64/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'src/CMakeFiles/gatbcore-dynamic.dir/build'. make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 42%] Built target gatbcore-dynamic make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/src /<>/obj-mips64el-linux-gnuabi64/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'src/CMakeFiles/gatbcore-static.dir/build'. make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [ 86%] Built target gatbcore-static make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/test/unit /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/test/unit 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'/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/thirdparty /<>/obj-mips64el-linux-gnuabi64 /<>/obj-mips64el-linux-gnuabi64/thirdparty /<>/obj-mips64el-linux-gnuabi64/thirdparty/CMakeFiles/thirdparty_copy.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' make -f thirdparty/CMakeFiles/thirdparty_copy.dir/build.make thirdparty/CMakeFiles/thirdparty_copy.dir/build make[3]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-mips64el-linux-gnuabi64/include/None/json cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E make_directory /<>/obj-mips64el-linux-gnuabi64/include/None/BooPHF cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/BooPHF/BooPHF.h /<>/obj-mips64el-linux-gnuabi64/include/None/BooPHF/ cd /<>/obj-mips64el-linux-gnuabi64/thirdparty && /usr/bin/cmake -E copy_if_different /<>/gatb-core/thirdparty/json/json.hpp /<>/obj-mips64el-linux-gnuabi64/include/None/json/ make[3]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' [100%] Built target thirdparty_copy make[2]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' /usr/bin/cmake -E cmake_progress_start /<>/obj-mips64el-linux-gnuabi64/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-mips64el-linux-gnuabi64' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/tools -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/tools/optionsparser2.cpp -- 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-- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank24.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank23.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank22.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank21.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank20.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank2.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank19.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank18.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank17.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank16.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank15.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank14.cpp -- Installing: 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/<>/debian/tmp/usr/include/gatb/tools/collections/impl/BooPHF.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BloomGroup.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/Bloom.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagPartition.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagFile.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagCache.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Iterable.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Container.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Collection.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Bag.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/template -- Installing: /<>/debian/tmp/usr/include/gatb/system -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/TimeCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/ThreadMacos.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/ThreadLinux.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/SystemInfoCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/System.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/MemoryCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemMacos.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemLinux.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/types.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/config_sha1.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ITime.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IThread.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ISystemInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ISmartPointer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IMemory.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IFileSystem.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/Exception.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/SortingCountAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Sequence2SuperKmer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/RepartitionAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/PartitionsCommand.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/PartiInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Model.pri -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Model.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/MPHFAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/LinearCounter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomMinimizerAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithmFactory.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithm.pri -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorSolidity.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorProxy.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorHistogram.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorDump.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorCutoff.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorChain.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorAbstract.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessor.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/ConfigurationAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Configuration.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BloomBuilder.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BloomAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BankKmers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BankKmerIterator.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api/IModel.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api/ICountProcessor.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/gatb_core.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/rank_vector.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/dag_vector.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/UnitigsConstructionAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Traversal.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Terminator.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Simplifications.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/NodesDeleter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/LinkTigs.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/IterativeExtensions.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/GraphUnitigs.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Graph.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Frontline.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/ExtremityInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/ContainerNode.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/BranchingAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/api -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/api/IContainerNode.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2 -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/unionFind.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ographBin.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ograph.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/logging.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/binSeq.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/bglue_algo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/bcalm_algo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ThreadPool.h -- Installing: /<>/debian/tmp/usr/include/gatb/bank -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Banks.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankStrings.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankSplitter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankRandom.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankHelpers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankFasta.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankConverterAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankComposite.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankBinary.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankAlbum.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Bank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Alphabet.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/AbstractBank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/Sequence.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/IBank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/IAlphabet.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/config.hpp -- Installing: /<>/debian/tmp/usr/test/gatb-core-cppunit -- Set runtime path of "/<>/debian/tmp/usr/test/gatb-core-cppunit" to "" -- Installing: /<>/debian/tmp/usr/test//db -- Installing: /<>/debian/tmp/usr/test//db/sample2.fa -- Installing: /<>/debian/tmp/usr/test//db/sample1.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/sample1.fa -- Installing: /<>/debian/tmp/usr/test//db/sample.fastq.gz -- Installing: /<>/debian/tmp/usr/test//db/sample.fastq -- Installing: /<>/debian/tmp/usr/test//db/reads3.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/reads2.fa -- Installing: /<>/debian/tmp/usr/test//db/reads1_list_ids.txt -- Installing: /<>/debian/tmp/usr/test//db/reads1.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/reads1.fa -- Installing: /<>/debian/tmp/usr/test//db/query.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/query.fa -- Installing: /<>/debian/tmp/usr/test//db/microsnp.fa -- Installing: /<>/debian/tmp/usr/test//db/leon2.fastq.leon-ref -- Installing: /<>/debian/tmp/usr/test//db/leon2.fastq -- Installing: /<>/debian/tmp/usr/test//db/leon1.fastq.leon-ref -- Installing: /<>/debian/tmp/usr/test//db/leon1.fastq -- Installing: /<>/debian/tmp/usr/test//db/celegans_reads.h5 -- Installing: /<>/debian/tmp/usr/test//db/album.txt -- Installing: /<>/debian/tmp/usr/test//db/README.md -- Installing: /<>/debian/tmp/usr/bin/dbgh5 -- Set runtime path of "/<>/debian/tmp/usr/bin/dbgh5" to "" -- Installing: /<>/debian/tmp/usr/bin/dbginfo -- Set runtime path of "/<>/debian/tmp/usr/bin/dbginfo" to "" -- Installing: /<>/debian/tmp/usr/bin/leon -- Set runtime path of "/<>/debian/tmp/usr/bin/leon" to "" -- Installing: /<>/debian/tmp/usr/include/BooPHF -- Installing: /<>/debian/tmp/usr/include/BooPHF/BooPHF.h make[1]: Leaving directory '/<>/obj-mips64el-linux-gnuabi64' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ --movedev gatb-core/cmake usr/lib \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libgatbcore-dev/usr/lib/mips64el-linux-gnuabi64 install -d -m 755 debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libgatbcore.a debian/libgatbcore-dev/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so debian/libgatbcore-dev/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64 PKGDEV=libgatbcore-dev PKGSHL=libgatbcore3 install -d -m 755 debian/libgatbcore-dev/usr mv debian/tmp/usr/include debian/libgatbcore-dev/usr install -d -m 755 debian/libgatbcore-dev/usr/lib/mips64el-linux-gnuabi64 mv gatb-core/cmake debian/libgatbcore-dev/usr/lib/mips64el-linux-gnuabi64 mkdir -p debian/gatb-core/usr/lib/gatb-core dh_install -a make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=gatb-core dh_installchangelogs -a -O--sourcedirectory=gatb-core dh_installexamples -a -O--sourcedirectory=gatb-core dh_installman -a -O--sourcedirectory=gatb-core dh_installinit -a -O--sourcedirectory=gatb-core dh_installsystemduser -a -O--sourcedirectory=gatb-core dh_perl -a -O--sourcedirectory=gatb-core dh_link -a -O--sourcedirectory=gatb-core dh_strip_nondeterminism -a -O--sourcedirectory=gatb-core dh_compress -a -O--sourcedirectory=gatb-core dh_fixperms -a -O--sourcedirectory=gatb-core dh_missing -a -O--sourcedirectory=gatb-core dh_dwz -a -O--sourcedirectory=gatb-core dh_strip -a -O--sourcedirectory=gatb-core dh_makeshlibs -a -O--sourcedirectory=gatb-core dh_shlibdeps -a -O--sourcedirectory=gatb-core dpkg-shlibdeps: warning: symbol H5P_CLS_DATASET_CREATE_ID_g used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol gzseek used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol gzrewind used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol deflateEnd used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Lexists used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol inflate used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Fclose used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol gztell used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Dopen2 used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol deflate used by debian/libgatbcore3/usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: 58 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--sourcedirectory=gatb-core dh_gencontrol -a -O--sourcedirectory=gatb-core dh_md5sums -a -O--sourcedirectory=gatb-core dh_builddeb -a -O--sourcedirectory=gatb-core dpkg-deb: building package 'gatb-core' in '../gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb'. dpkg-deb: building package 'gatb-core-dbgsym' in '../gatb-core-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb'. dpkg-deb: building package 'libgatbcore3' in '../libgatbcore3_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb'. dpkg-deb: building package 'libgatbcore3-dbgsym' in '../libgatbcore3-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb'. dpkg-deb: building package 'libgatbcore-dev' in '../libgatbcore-dev_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-03-04T14:15:44Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.changes: ------------------------------------------------------------ Format: 1.8 Date: Mon, 17 Feb 2020 15:41:58 +0100 Source: gatb-core Binary: gatb-core gatb-core-dbgsym libgatbcore-dev libgatbcore3 libgatbcore3-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.4.1+git20191209.9398f28+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: gatb-core - Genome Analysis Toolbox with de-Bruijn graph libgatbcore-dev - development library of the Genome Analysis Toolbox libgatbcore3 - dynamic library of the Genome Analysis Toolbox Changes: gatb-core (1.4.1+git20191209.9398f28+dfsg-3) unstable; urgency=medium . * Team upload. * add multi-arch hints Checksums-Sha1: 98aec15500df6562ee57685d27ec2154c2b9607c 48106108 gatb-core-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 5cd04200e9237141688ae780c4e03e83dccc99fd 9359 gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.buildinfo c74d8949aba4638b6da5723275333dab81695f1c 1345216 gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 8c3168b63efa3e2eb03eb14c13fde84ffa21f75e 4421740 libgatbcore-dev_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 7650a5b4bc62997384b4e30f3517ff827d334490 52843160 libgatbcore3-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb f0e8e0d2148017af124b3aa0fad202c31fd6f06c 1413524 libgatbcore3_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb Checksums-Sha256: 8c1d1c39561ee754be96edae1473fe2191ccf5bf572c08ff98e63b31a21256a2 48106108 gatb-core-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 21660689fc8e675dc3f66df11f4c3eb1746ac36673ec8d4f31b202d6ad35e07f 9359 gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.buildinfo 77845833c6abad5a79b0bab5ba8a710d231545f5fe6012188031c53f3d835a71 1345216 gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 5ab4aa9d665433dfaeef100d37493e4820449b762dcc045e70d7d242e513c873 4421740 libgatbcore-dev_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb aff01516d60d540f47686d31a4aaf840af8a7f7918b92eb57e97f9dc160c1b12 52843160 libgatbcore3-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 149107ecb1ec6da7871951a5ac80dd1dbfebc768ce36b54602f9af853f2f4c86 1413524 libgatbcore3_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb Files: 2a359fab616d064ad6e82ef1241254be 48106108 debug optional gatb-core-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb a5fc97b30cfbcc5129e1c856a4972141 9359 science optional gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.buildinfo 8354d68be30c70e6f35a137a959ecab8 1345216 science optional gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 8816c7531d4ffecf9bde62b707e73c17 4421740 libdevel optional libgatbcore-dev_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb 0976a09c2796c976e6ef55babe1d64c8 52843160 debug optional libgatbcore3-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb f99f055f65b8f9115044f8da20093b69 1413524 libs optional libgatbcore3_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: gatb-core Binary: gatb-core libgatbcore3 libgatbcore-dev gatb-core-testdata Architecture: mips64el Version: 1.4.1+git20191209.9398f28+dfsg-3 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1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-4), binutils-common (= 2.34-4), binutils-x86-64-linux-gnu (= 2.34-4), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), cmake (= 3.16.3-1), cmake-data (= 3.16.3-1), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-29), cpp-9 (= 9.2.1-30), d-shlibs (= 0.88), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.9), debian-archive-keyring (= 2019.1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), doxygen (= 1.8.16-2), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), fontconfig (= 2.13.1-2+b1), fontconfig-config (= 2.13.1-2), fonts-dejavu-core (= 2.37-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-30), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200222-1), gcc-8 (= 8.3.0-29), gcc-8-base (= 8.3.0-29), gcc-9 (= 9.2.1-30), gcc-9-base (= 9.2.1-30), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.19-2), graphviz (= 2.42.2-3+b2), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-1), hdf5-helpers (= 1.10.4+repack-11), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libann0 (= 1.1.2+doc-7), libapt-pkg5.0 (= 1.8.4), libarchive-zip-perl (= 1.67-2), libarchive13 (= 3.4.0-1+b1), libasan5 (= 9.2.1-30), libatomic1 (= 10-20200222-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2+b1), libbinutils (= 2.34-4), libblkid1 (= 2.34-0.1), libboost-dev (= 1.67.0.2+b1), libboost1.67-dev (= 1.67.0-17), libbrotli1 (= 1.0.7-6), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-10), libc-dev-bin (= 2.29-10), libc6 (= 2.29-10), libc6-dev (= 2.29-10), libcairo2 (= 1.16.0-4), libcap-ng0 (= 0.7.9-2.1+b1), libcc1-0 (= 10-20200222-1), libcdt5 (= 2.42.2-3+b2), libcgraph6 (= 2.42.2-3+b2), libclang1-9 (= 1:9.0.1-8+b1), libcom-err2 (= 1.45.5-2), libcppunit-1.15-0 (= 1.15.1-2), libcppunit-dev (= 1.15.1-2), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.15-1), libcrypt1 (= 1:4.4.15-1), libctf-nobfd0 (= 2.34-4), libctf0 (= 2.34-4), libcurl4 (= 7.68.0-1), libdatrie1 (= 0.2.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.9), libdpkg-perl (= 1.19.7), libedit2 (= 3.1-20191231-1), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-3), libfile-stripnondeterminism-perl (= 1.6.3-2), libfontconfig1 (= 2.13.1-2+b1), libfreetype6 (= 2.10.1-2), libfribidi0 (= 1.0.8-2), libgcc-8-dev (= 8.3.0-29), libgcc-9-dev (= 9.2.1-30), libgcc-s1 (= 10-20200222-1), libgcc1 (= 1:10-20200222-1), libgcrypt20 (= 1.8.5-5), libgd3 (= 2.2.5-5.2), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libgfortran5 (= 10-20200222-1), libglib2.0-0 (= 2.62.5-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.12-2), libgomp1 (= 10-20200222-1), libgpg-error0 (= 1.37-1), libgraphite2-3 (= 1.3.13-11), libgssapi-krb5-2 (= 1.17-6), libgts-0.7-5 (= 0.7.6+darcs121130-4+b1), libgvc6 (= 2.42.2-3+b2), libgvpr2 (= 2.42.2-3+b2), libharfbuzz0b (= 2.6.4-1), libhdf5-103 (= 1.10.4+repack-11), libhdf5-cpp-103 (= 1.10.4+repack-11), libhdf5-dev (= 1.10.4+repack-11), libhogweed5 (= 3.5.1+really3.5.1-2), libice6 (= 2:1.0.9-2), libicu63 (= 63.2-2), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10-20200222-1), libjbig0 (= 2.1-3.1+b2), libjpeg62-turbo (= 1:1.5.2-2+b1), libjpeg62-turbo-dev (= 1:1.5.2-2+b1), libjsoncpp-dev (= 1.7.4-3.1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), liblab-gamut1 (= 2.42.2-3+b2), libldap-2.4-2 (= 2.4.49+dfsg-1), libldap-common (= 2.4.49+dfsg-1), libllvm9 (= 1:9.0.1-8+b1), liblsan0 (= 10-20200222-1), libltdl7 (= 2.4.6-14), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-29), libncurses6 (= 6.2-1), libncursesw6 (= 6.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.40.0-1), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpango-1.0-0 (= 1.42.4-8), libpangocairo-1.0-0 (= 1.42.4-8), libpangoft2-1.0-0 (= 1.42.4-8), libpathplan4 (= 2.42.2-3+b2), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libpixman-1-0 (= 0.36.0-1), libpng16-16 (= 1.6.37-2), libprocps8 (= 2:3.3.16-3), libpsl5 (= 0.20.2-2), libquadmath0 (= 10-20200222-1), librhash0 (= 1.3.9-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.2-2), libselinux1 (= 3.0-1+b1), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b1), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsm6 (= 2:1.2.3-1), libsmartcols1 (= 2.34-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1d-2), libstdc++-9-dev (= 9.2.1-30), libstdc++6 (= 10-20200222-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 244.3-1), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.16.0-2), libthai-data (= 0.1.28-3), libthai0 (= 0.1.28-3), libtiff5 (= 4.1.0+git191117-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200222-1), libubsan1 (= 10-20200222-1), libuchardet0 (= 0.0.6-3), libudev1 (= 244.3-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libuv1 (= 1.34.2-1), libwebp6 (= 0.6.1-2+b1), libx11-6 (= 2:1.6.9-2), libx11-data (= 2:1.6.9-2), libxapian30 (= 1.4.14-2), libxau6 (= 1:1.0.8-1+b2), libxaw7 (= 2:1.0.13-1+b2), libxcb-render0 (= 1.13.1-5), libxcb-shm0 (= 1.13.1-5), libxcb1 (= 1.13.1-5), libxdmcp6 (= 1:1.1.2-3), libxext6 (= 2:1.3.3-1+b2), libxml2 (= 2.9.10+dfsg-4), libxmu6 (= 2:1.1.2-2+b3), libxpm4 (= 1:3.5.12-1), libxrender1 (= 1:0.9.10-1), libxt6 (= 1:1.1.5-1+b3), libz3-4 (= 4.8.7-4), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.4.19-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), procps (= 2:3.3.16-3), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-2.1), tar (= 1.30+dfsg-6+b1), ucf (= 3.0038+nmu1), util-linux (= 2.34-0.1), x11-common (= 1:7.7+20), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1581950518" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ gatb-core-dbgsym_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb -------------------------------------------------------------- new Debian package, version 2.0. size 48106108 bytes: control archive=724 bytes. 515 bytes, 12 lines control 411 bytes, 4 lines md5sums Package: gatb-core-dbgsym Source: gatb-core Version: 1.4.1+git20191209.9398f28+dfsg-3 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 53491 Depends: gatb-core (= 1.4.1+git20191209.9398f28+dfsg-3) Section: debug Priority: optional Description: debug symbols for gatb-core Build-Ids: 23cfa7c0aed29d7891364fd1798f5f93034c7712 62fe2fedf04532c9b028db51c24a9f418dbfa650 dece5e5d6c0edd9302baf69feb0cba2d39650177 drwxr-xr-x root/root 0 2020-02-17 14:41 ./ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 5009240 2020-02-17 14:41 ./usr/lib/debug/.build-id/23/cfa7c0aed29d7891364fd1798f5f93034c7712.debug drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/62/ -rw-r--r-- root/root 22633000 2020-02-17 14:41 ./usr/lib/debug/.build-id/62/fe2fedf04532c9b028db51c24a9f418dbfa650.debug drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/de/ -rw-r--r-- root/root 22691272 2020-02-17 14:41 ./usr/lib/debug/.build-id/de/ce5e5d6c0edd9302baf69feb0cba2d39650177.debug drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 4425552 2020-02-17 14:41 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/gatb-core.debug drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-02-17 14:41 ./usr/share/doc/gatb-core-dbgsym -> gatb-core gatb-core_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb ------------------------------------------------------- new Debian package, version 2.0. size 1345216 bytes: control archive=1188 bytes. 1040 bytes, 21 lines control 553 bytes, 9 lines md5sums Package: gatb-core Version: 1.4.1+git20191209.9398f28+dfsg-3 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 16452 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.4), libhdf5-103, libstdc++6 (>= 9), zlib1g (>= 1:1.2.6) Section: science Priority: optional Homepage: https://github.com/GATB/gatb-core Description: Genome Analysis Toolbox with de-Bruijn graph The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. 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These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/ . This package contains the static library and the header files of the gatb-core library. drwxr-xr-x root/root 0 2020-02-17 14:41 ./ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/BooPHF/ -rw-r--r-- root/root 33854 2020-02-17 14:41 ./usr/include/BooPHF/BooPHF.h drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/gatb/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/gatb/bank/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/gatb/bank/api/ -rw-r--r-- root/root 2480 2019-12-09 17:18 ./usr/include/gatb/bank/api/IAlphabet.hpp -rw-r--r-- root/root 7592 2019-12-09 17:18 ./usr/include/gatb/bank/api/IBank.hpp -rw-r--r-- root/root 11212 2019-12-09 17:18 ./usr/include/gatb/bank/api/Sequence.hpp drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/include/gatb/bank/impl/ -rw-r--r-- root/root 3647 2019-12-09 17:18 ./usr/include/gatb/bank/impl/AbstractBank.hpp -rw-r--r-- root/root 2453 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Description: debug symbols for libgatbcore3 Build-Ids: e223061743376e6bd490533d9e53d15a6d294eee drwxr-xr-x root/root 0 2020-02-17 14:41 ./ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/debug/.build-id/e2/ -rw-r--r-- root/root 57897280 2020-02-17 14:41 ./usr/lib/debug/.build-id/e2/23061743376e6bd490533d9e53d15a6d294eee.debug drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-02-17 14:41 ./usr/share/doc/libgatbcore3-dbgsym -> libgatbcore3 libgatbcore3_1.4.1+git20191209.9398f28+dfsg-3_mips64el.deb ---------------------------------------------------------- new Debian package, version 2.0. size 1413524 bytes: control archive=1156 bytes. 1090 bytes, 25 lines control 235 bytes, 3 lines md5sums 63 bytes, 1 lines shlibs 65 bytes, 2 lines triggers Package: libgatbcore3 Source: gatb-core Version: 1.4.1+git20191209.9398f28+dfsg-3 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 13094 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.4), libstdc++6 (>= 9) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/GATB/gatb-core Description: dynamic library of the Genome Analysis Toolbox The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/ . This package contains the dynamic library. drwxr-xr-x root/root 0 2020-02-17 14:41 ./ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/lib/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 13360688 2020-02-17 14:41 ./usr/lib/mips64el-linux-gnuabi64/libgatbcore.so.3 drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-02-17 14:41 ./usr/share/doc/libgatbcore3/ -rw-r--r-- root/root 1165 2020-02-17 14:41 ./usr/share/doc/libgatbcore3/changelog.Debian.gz -rw-r--r-- root/root 34732 2020-01-02 14:29 ./usr/share/doc/libgatbcore3/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [585 B] Get:5 copy:/<>/apt_archive ./ Packages [675 B] Fetched 2223 B in 0s (108 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libjson-xs-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 7896 kB of archives. After this operation, 22.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.19-2 [529 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-3 [661 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.19-2 [889 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b2 [71.3 kB] Get:11 http://debian.oregonstate.edu/debian 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2.3100-1 [39.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.22-1 [369 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.26-1 [27.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.43-1 [83.2 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.12-1 [36.3 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-perl all 4.02000-2 [88.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.008001-2 [331 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.55.0 [1312 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7896 kB in 0s (33.9 MB/s) Selecting previously unselected package readline-common. (Reading database ... 39066 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.19-2_amd64.deb ... Unpacking gpgconf (2.2.19-2) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libapt-pkg-perl (0.1.36+b2) ... Setting up libberkeleydb-perl:amd64 (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libio-pty-perl (1:1.12-1) ... Setting up libclone-perl (0.43-2) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up libsqlite3-0:amd64 (3.31.1-3) ... Setting up libfuture-perl (0.43-1) ... Setting up libyaml-libyaml-perl (0.81+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (4) ... Setting up libmldbm-perl (2.05-2) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libnumber-compare-perl (0.03-1) ... 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Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.008001-2) ... Setting up libnet-dns-perl (1.22-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.19-2) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.19-2) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.46-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 4160296 Build-Time: 2742 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 32 Job: gatb-core_1.4.1+git20191209.9398f28+dfsg-3 Lintian: pass Machine Architecture: amd64 Package: gatb-core Package-Time: 2785 Source-Version: 1.4.1+git20191209.9398f28+dfsg-3 Space: 4160296 Status: successful Version: 1.4.1+git20191209.9398f28+dfsg-3 -------------------------------------------------------------------------------- Finished at 2020-03-04T14:15:44Z Build needed 00:46:25, 4160296k disk space