sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | gatb-core 1.4.2+dfsg-13 (arm64) Wed, 16 Oct 2024 01:12:08 +0000 | +==============================================================================+ Package: gatb-core Version: 1.4.2+dfsg-13 Source Version: 1.4.2+dfsg-13 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-37e56383-af15-4b0c-865c-04936e0463ae' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-qI9IQE/resolver-izn7pJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian sid InRelease Get:2 http://localhost:3142/debian sid/main arm64 Packages [9916 kB] Fetched 9916 kB in 1s (9309 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'gatb-core' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gatb-core.git Please use: git clone https://salsa.debian.org/med-team/gatb-core.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3053 kB of source archives. Get:1 http://localhost:3142/debian sid/main gatb-core 1.4.2+dfsg-13 (dsc) [2700 B] Get:2 http://localhost:3142/debian sid/main gatb-core 1.4.2+dfsg-13 (tar) [2945 kB] Get:3 http://localhost:3142/debian sid/main gatb-core 1.4.2+dfsg-13 (diff) [105 kB] Fetched 3053 kB in 1s (5990 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/gatb-core-qI9IQE/gatb-core-1.4.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/gatb-core-qI9IQE' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [809 B] Get:5 copy:/<>/apt_archive ./ Packages [852 B] Fetched 2270 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: login mount tzdata Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cmake cmake-data cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz fakeroot file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-14-aarch64-linux-gnu gcc-14-aarch64-linux-gnu-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base graphviz groff-base hdf5-helpers:arm64 intltool-debian libabsl20230802 libaec-dev:arm64 libaec0:arm64 libann0 libaom3 libarchive-zip-perl libarchive13t64 libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libavif16 libboost-dev:arm64 libboost1.83-dev:arm64 libbrotli-dev:arm64 libbrotli1 libbrotli1:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcairo2 libcdt5 libcgraph6 libclang-cpp19 libclang1-19 libcom-err2 libcom-err2:arm64 libcppunit-1.15-0:arm64 libcppunit-dev:arm64 libcrypt-dev:arm64 libcrypt1:arm64 libcurl4-openssl-dev:arm64 libcurl4t64 libcurl4t64:arm64 libdatrie1 libdav1d7 libdb5.3t64:arm64 libde265-0 libdebhelper-perl libdeflate0 libedit2 libelf1t64 libevent-2.1-7t64:arm64 libexpat1 libfakeroot libffi8:arm64 libfile-stripnondeterminism-perl libfmt9 libfontconfig1 libfreetype6 libfribidi0 libgav1-1 libgcc-14-dev:arm64 libgcc-14-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgd3 libgfortran5:arm64 libglib2.0-0t64 libgmp-dev:arm64 libgmp10:arm64 libgmpxx4ldbl:arm64 libgnutls-dane0t64:arm64 libgnutls-openssl27t64:arm64 libgnutls28-dev:arm64 libgnutls30t64:arm64 libgomp1:arm64 libgomp1-arm64-cross libgraphite2-3 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgts-0.7-5t64 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103-1t64:arm64 libhdf5-cpp-103-1t64:arm64 libhdf5-dev:arm64 libhdf5-fortran-102t64:arm64 libhdf5-hl-100t64:arm64 libhdf5-hl-cpp-100t64:arm64 libhdf5-hl-fortran-100t64:arm64 libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhogweed6t64:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libice6 libicu72 libidn2-0:arm64 libidn2-dev:arm64 libimagequant0 libitm1:arm64 libitm1-arm64-cross libjbig0 libjpeg-dev:arm64 libjpeg62-turbo libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp-dev:arm64 libjsoncpp26 libjsoncpp26:arm64 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 liblab-gamut1 libldap-2.5-0 libldap-2.5-0:arm64 liblerc4 libllvm19 liblsan0:arm64 liblsan0-arm64-cross libltdl7 libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:arm64 libnghttp2-14 libnghttp2-14:arm64 libnghttp2-dev:arm64 libp11-kit-dev:arm64 libp11-kit0:arm64 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libproc2-0 libpsl-dev:arm64 libpsl5t64 libpsl5t64:arm64 libraqm0 librav1e0.7 librhash1 librtmp-dev:arm64 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsharpyuv0 libsm6 libsqlite3-0 libssh2-1-dev:arm64 libssh2-1t64 libssh2-1t64:arm64 libssl-dev:arm64 libssl3t64:arm64 libstdc++-14-dev:arm64 libstdc++-14-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsvtav1enc2 libsz2:arm64 libtasn1-6:arm64 libtasn1-6-dev:arm64 libthai-data libthai0 libtiff6 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunbound8:arm64 libunistring5:arm64 libuv1t64 libwebp7 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6t64 libyuv0 libz3-4 libzstd-dev:arm64 libzstd1:arm64 linux-libc-dev-arm64-cross m4 man-db nettle-dev:arm64 pkgconf:arm64 pkgconf-bin po-debconf procps sensible-utils x11-common zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc cmake-format elpa-cmake-mode ninja-build gcc-14-locales cpp-14-doc cpp-doc dh-make doxygen-latex doxygen-doc doxygen-gui gcc-14-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff lrzip libboost-doc:arm64 libboost1.83-doc:arm64 libboost-atomic1.83-dev:arm64 libboost-chrono1.83-dev:arm64 libboost-container1.83-dev:arm64 libboost-context1.83-dev:arm64 libboost-contract1.83-dev:arm64 libboost-coroutine1.83-dev:arm64 libboost-date-time1.83-dev:arm64 libboost-exception1.83-dev:arm64 libboost-fiber1.83-dev:arm64 libboost-filesystem1.83-dev:arm64 libboost-graph-parallel1.83-dev:arm64 libboost-graph1.83-dev:arm64 libboost-iostreams1.83-dev:arm64 libboost-json1.83-dev:arm64 libboost-locale1.83-dev:arm64 libboost-log1.83-dev:arm64 libboost-math1.83-dev:arm64 libboost-mpi-python1.83-dev:arm64 libboost-mpi1.83-dev:arm64 libboost-nowide1.83-dev:arm64 libboost-numpy1.83-dev:arm64 libboost-program-options1.83-dev:arm64 libboost-python1.83-dev:arm64 libboost-random1.83-dev:arm64 libboost-regex1.83-dev:arm64 libboost-serialization1.83-dev:arm64 libboost-stacktrace1.83-dev:arm64 libboost-system1.83-dev:arm64 libboost-test1.83-dev:arm64 libboost-thread1.83-dev:arm64 libboost-timer1.83-dev:arm64 libboost-type-erasure1.83-dev:arm64 libboost-url1.83-dev:arm64 libboost-wave1.83-dev:arm64 libboost1.83-tools-dev:arm64 libmpfrc++-dev:arm64 libntl-dev:arm64 glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 libcppunit-doc:arm64 libcurl4-doc:arm64 libidn-dev:arm64 libkrb5-dev:arm64 libldap2-dev:arm64 libgd-tools low-memory-monitor gmp-doc:arm64 libgmp10-doc:arm64 libmpfr-dev:arm64 dns-root-data:arm64 gnutls-bin:arm64 gnutls-doc:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhdf5-doc:arm64 libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc libnghttp2-doc:arm64 p11-kit-doc:arm64 libssl-doc:arm64 libstdc++-14-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation ca-certificates ca-certificates:arm64 libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin libheif-plugin-x265 libheif-plugin-aomenc krb5-locales krb5-locales:arm64 libldap-common libldap-common:arm64 libgpm2 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libtasn1-doc:arm64 libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cmake cmake-data cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism doxygen dwz fakeroot file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-14-aarch64-linux-gnu gcc-14-aarch64-linux-gnu-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base graphviz groff-base hdf5-helpers:arm64 intltool-debian libabsl20230802 libaec-dev:arm64 libaec0:arm64 libann0 libaom3 libarchive-zip-perl libarchive13t64 libasan8:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libavif16 libboost-dev:arm64 libboost1.83-dev:arm64 libbrotli-dev:arm64 libbrotli1 libbrotli1:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcairo2 libcdt5 libcgraph6 libclang-cpp19 libclang1-19 libcom-err2 libcom-err2:arm64 libcppunit-1.15-0:arm64 libcppunit-dev:arm64 libcrypt-dev:arm64 libcrypt1:arm64 libcurl4-openssl-dev:arm64 libcurl4t64 libcurl4t64:arm64 libdatrie1 libdav1d7 libdb5.3t64:arm64 libde265-0 libdebhelper-perl libdeflate0 libedit2 libelf1t64 libevent-2.1-7t64:arm64 libexpat1 libfakeroot libffi8:arm64 libfile-stripnondeterminism-perl libfmt9 libfontconfig1 libfreetype6 libfribidi0 libgav1-1 libgcc-14-dev:arm64 libgcc-14-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgd3 libgfortran5:arm64 libglib2.0-0t64 libgmp-dev:arm64 libgmp10:arm64 libgmpxx4ldbl:arm64 libgnutls-dane0t64:arm64 libgnutls-openssl27t64:arm64 libgnutls28-dev:arm64 libgnutls30t64:arm64 libgomp1:arm64 libgomp1-arm64-cross libgraphite2-3 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libgts-0.7-5t64 libgvc6 libgvpr2 libharfbuzz0b libhdf5-103-1t64:arm64 libhdf5-cpp-103-1t64:arm64 libhdf5-dev:arm64 libhdf5-fortran-102t64:arm64 libhdf5-hl-100t64:arm64 libhdf5-hl-cpp-100t64:arm64 libhdf5-hl-fortran-100t64:arm64 libheif-plugin-dav1d libheif-plugin-libde265 libheif1 libhogweed6t64:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libice6 libicu72 libidn2-0:arm64 libidn2-dev:arm64 libimagequant0 libitm1:arm64 libitm1-arm64-cross libjbig0 libjpeg-dev:arm64 libjpeg62-turbo libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp-dev:arm64 libjsoncpp26 libjsoncpp26:arm64 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 liblab-gamut1 libldap-2.5-0 libldap-2.5-0:arm64 liblerc4 libllvm19 liblsan0:arm64 liblsan0-arm64-cross libltdl7 libmagic-mgc libmagic1t64 libncursesw6 libnettle8t64:arm64 libnghttp2-14 libnghttp2-14:arm64 libnghttp2-dev:arm64 libp11-kit-dev:arm64 libp11-kit0:arm64 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libpkgconf3 libpng16-16t64 libproc2-0 libpsl-dev:arm64 libpsl5t64 libpsl5t64:arm64 libraqm0 librav1e0.7 librhash1 librtmp-dev:arm64 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsharpyuv0 libsm6 libsqlite3-0 libssh2-1-dev:arm64 libssh2-1t64 libssh2-1t64:arm64 libssl-dev:arm64 libssl3t64:arm64 libstdc++-14-dev:arm64 libstdc++-14-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsvtav1enc2 libsz2:arm64 libtasn1-6:arm64 libtasn1-6-dev:arm64 libthai-data libthai0 libtiff6 libtool libtsan2:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunbound8:arm64 libunistring5:arm64 libuv1t64 libwebp7 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6t64 libyuv0 libz3-4 libzstd-dev:arm64 libzstd1:arm64 linux-libc-dev-arm64-cross m4 man-db nettle-dev:arm64 pkgconf:arm64 pkgconf-bin po-debconf procps sbuild-build-depends-main-dummy:arm64 sensible-utils x11-common zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 248 newly installed, 0 to remove and 0 not upgraded. Need to get 235 MB of archives. After this operation, 1108 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://localhost:3142/debian sid/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:3 http://localhost:3142/debian sid/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:4 http://localhost:3142/debian sid/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:5 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:6 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:8 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:9 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:10 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:11 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:12 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get:13 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:15 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:16 http://localhost:3142/debian sid/main amd64 autoconf all 2.72-3 [493 kB] Get:17 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:18 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:19 http://localhost:3142/debian sid/main amd64 autopoint all 0.22.5-2 [723 kB] Get:20 http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.43.1-5 [3543 kB] Get:21 http://localhost:3142/debian sid/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get:22 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:23 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:24 http://localhost:3142/debian sid/main amd64 libarchive13t64 amd64 3.7.4-1 [349 kB] Get:25 http://localhost:3142/debian sid/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:26 http://localhost:3142/debian sid/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:27 http://localhost:3142/debian sid/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get:28 http://localhost:3142/debian sid/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:29 http://localhost:3142/debian sid/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:30 http://localhost:3142/debian sid/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:31 http://localhost:3142/debian sid/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:32 http://localhost:3142/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:33 http://localhost:3142/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:34 http://localhost:3142/debian sid/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:35 http://localhost:3142/debian sid/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:36 http://localhost:3142/debian sid/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get:39 http://localhost:3142/debian sid/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:40 http://localhost:3142/debian sid/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:41 http://localhost:3142/debian sid/main amd64 libjsoncpp26 amd64 1.9.6-2 [81.6 kB] Get:42 http://localhost:3142/debian sid/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get:43 http://localhost:3142/debian sid/main amd64 libuv1t64 amd64 1.48.0-6 [148 kB] Get:44 http://localhost:3142/debian sid/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get:45 http://localhost:3142/debian sid/main amd64 gcc-14-aarch64-linux-gnu-base amd64 14.2.0-6cross1 [47.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 cpp-14-aarch64-linux-gnu amd64 14.2.0-6cross1 [11.2 MB] Get:47 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:14.2.0-1 [4844 B] Get:48 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base all 14.2.0-6cross1 [42.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.40-3cross1 [1141 kB] Get:50 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 14.2.0-6cross1 [54.0 kB] Get:51 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 14.2.0-6cross1 [91.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 14.2.0-6cross1 [25.9 kB] Get:53 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 14.2.0-6cross1 [10.3 kB] Get:54 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 14.2.0-6cross1 [436 kB] Get:55 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 14.2.0-6cross1 [201 kB] Get:56 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 14.2.0-6cross1 [415 kB] Get:57 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 14.2.0-6cross1 [546 kB] Get:58 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 14.2.0-6cross1 [186 kB] Get:59 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 14.2.0-6cross1 [256 kB] Get:60 http://localhost:3142/debian sid/main amd64 libgcc-14-dev-arm64-cross all 14.2.0-6cross1 [2458 kB] Get:61 http://localhost:3142/debian sid/main amd64 gcc-14-aarch64-linux-gnu amd64 14.2.0-6cross1 [21.6 MB] Get:62 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:14.2.0-1 [1448 B] Get:63 http://localhost:3142/debian sid/main amd64 linux-libc-dev-arm64-cross all 6.11.2-1cross1 [2241 kB] Get:64 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.40-3cross1 [1585 kB] Get:65 http://localhost:3142/debian sid/main amd64 libstdc++-14-dev-arm64-cross all 14.2.0-6cross1 [2543 kB] Get:66 http://localhost:3142/debian sid/main amd64 g++-14-aarch64-linux-gnu amd64 14.2.0-6cross1 [12.2 MB] Get:67 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:68 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.12 [3548 B] Get:69 http://localhost:3142/debian sid/main amd64 d-shlibs all 0.107 [11.0 kB] Get:70 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:71 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:72 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:73 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:74 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:75 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:76 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:77 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:78 http://localhost:3142/debian sid/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:79 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:80 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:81 http://localhost:3142/debian sid/main amd64 debhelper all 13.20 [915 kB] Get:82 http://localhost:3142/debian sid/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:83 http://localhost:3142/debian sid/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:84 http://localhost:3142/debian sid/main amd64 libllvm19 amd64 1:19.1.1-1 [26.0 MB] Get:85 http://localhost:3142/debian sid/main amd64 libclang-cpp19 amd64 1:19.1.1-1 [13.2 MB] Get:86 http://localhost:3142/debian sid/main amd64 libclang1-19 amd64 1:19.1.1-1 [7606 kB] Get:87 http://localhost:3142/debian sid/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get:88 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:89 http://localhost:3142/debian sid/main amd64 libxapian30 amd64 1.4.25-1 [1139 kB] Get:90 http://localhost:3142/debian sid/main amd64 doxygen amd64 1.9.8+ds-2+b2 [5050 kB] Get:91 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:92 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:93 http://localhost:3142/debian sid/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get:94 http://localhost:3142/debian sid/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:95 http://localhost:3142/debian sid/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:96 http://localhost:3142/debian sid/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:97 http://localhost:3142/debian sid/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:98 http://localhost:3142/debian sid/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:99 http://localhost:3142/debian sid/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get:100 http://localhost:3142/debian sid/main arm64 gcc-14-base arm64 14.2.0-6 [46.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get:102 http://localhost:3142/debian sid/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get:103 http://localhost:3142/debian sid/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get:104 http://localhost:3142/debian sid/main amd64 libaom3 amd64 3.9.1-1 [1864 kB] Get:105 http://localhost:3142/debian sid/main amd64 libdav1d7 amd64 1.4.3-1 [551 kB] Get:106 http://localhost:3142/debian sid/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get:107 http://localhost:3142/debian sid/main amd64 libgav1-1 amd64 0.19.0-2+b1 [351 kB] Get:108 http://localhost:3142/debian sid/main amd64 librav1e0.7 amd64 0.7.1-7+b1 [921 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get:110 http://localhost:3142/debian sid/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:111 http://localhost:3142/debian sid/main amd64 libyuv0 amd64 0.0.1888.20240710-3 [170 kB] Get:112 http://localhost:3142/debian sid/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get:113 http://localhost:3142/debian sid/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:114 http://localhost:3142/debian sid/main amd64 libheif-plugin-dav1d amd64 1.18.2-2 [10.9 kB] Get:115 http://localhost:3142/debian sid/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get:116 http://localhost:3142/debian sid/main amd64 libheif-plugin-libde265 amd64 1.18.2-2 [14.2 kB] Get:117 http://localhost:3142/debian sid/main amd64 libheif1 amd64 1.18.2-2 [312 kB] Get:118 http://localhost:3142/debian sid/main amd64 libimagequant0 amd64 2.18.0-1+b1 [35.3 kB] Get:119 http://localhost:3142/debian sid/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:120 http://localhost:3142/debian sid/main amd64 libglib2.0-0t64 amd64 2.82.1-1 [1499 kB] Get:121 http://localhost:3142/debian sid/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:122 http://localhost:3142/debian sid/main amd64 libharfbuzz0b amd64 9.0.0-1 [474 kB] Get:123 http://localhost:3142/debian sid/main amd64 libraqm0 amd64 0.10.1-1+b1 [14.2 kB] Get:124 http://localhost:3142/debian sid/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get:125 http://localhost:3142/debian sid/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:126 http://localhost:3142/debian sid/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:127 http://localhost:3142/debian sid/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:128 http://localhost:3142/debian sid/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:129 http://localhost:3142/debian sid/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:130 http://localhost:3142/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:131 http://localhost:3142/debian sid/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:132 http://localhost:3142/debian sid/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:133 http://localhost:3142/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:134 http://localhost:3142/debian sid/main amd64 libxpm4 amd64 1:3.5.17-1+b1 [56.1 kB] Get:135 http://localhost:3142/debian sid/main amd64 libgd3 amd64 2.3.3-12 [125 kB] Get:136 http://localhost:3142/debian sid/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2 [157 kB] Get:137 http://localhost:3142/debian sid/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get:138 http://localhost:3142/debian sid/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB] Get:139 http://localhost:3142/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:140 http://localhost:3142/debian sid/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get:141 http://localhost:3142/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:142 http://localhost:3142/debian sid/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get:143 http://localhost:3142/debian sid/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get:144 http://localhost:3142/debian sid/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:145 http://localhost:3142/debian sid/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get:146 http://localhost:3142/debian sid/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get:147 http://localhost:3142/debian sid/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [223 kB] Get:148 http://localhost:3142/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [54.4 kB] Get:149 http://localhost:3142/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [35.2 kB] Get:150 http://localhost:3142/debian sid/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get:151 http://localhost:3142/debian sid/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get:152 http://localhost:3142/debian sid/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get:153 http://localhost:3142/debian sid/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get:154 http://localhost:3142/debian sid/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:155 http://localhost:3142/debian sid/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get:156 http://localhost:3142/debian sid/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get:157 http://localhost:3142/debian sid/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get:158 http://localhost:3142/debian sid/main amd64 libxmu6 amd64 2:1.1.3-3+b2 [58.7 kB] Get:159 http://localhost:3142/debian sid/main amd64 libxaw7 amd64 2:1.0.14-1+b2 [199 kB] Get:160 http://localhost:3142/debian sid/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get:161 http://localhost:3142/debian sid/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB] Get:162 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 14.2.0-6 [54.0 kB] Get:163 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.40-3 [2453 kB] Get:164 http://localhost:3142/debian sid/main arm64 libaec0 arm64 1.1.3-1 [22.1 kB] Get:165 http://localhost:3142/debian sid/main arm64 libsz2 arm64 1.1.3-1 [7664 B] Get:166 http://localhost:3142/debian sid/main arm64 libaec-dev arm64 1.1.3-1 [19.7 kB] Get:167 http://localhost:3142/debian sid/main arm64 libasan8 arm64 14.2.0-6 [2578 kB] Get:168 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 14.2.0-6 [10.1 kB] Get:169 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 14.2.0-6 [124 kB] Get:170 http://localhost:3142/debian sid/main arm64 libitm1 arm64 14.2.0-6 [24.1 kB] Get:171 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 14.2.0-6 [1162 kB] Get:172 http://localhost:3142/debian sid/main arm64 libtsan2 arm64 14.2.0-6 [2386 kB] Get:173 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 14.2.0-6 [637 kB] Get:174 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 14.2.0-6 [1039 kB] Get:175 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 14.2.0-6 [1442 kB] Get:176 http://localhost:3142/debian sid/main arm64 libgcc-14-dev arm64 14.2.0-6 [2364 kB] Get:177 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.36-5 [91.6 kB] Get:178 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-5 [122 kB] Get:179 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.40-3 [1591 kB] Get:180 http://localhost:3142/debian sid/main arm64 libstdc++-14-dev arm64 14.2.0-6 [2265 kB] Get:181 http://localhost:3142/debian sid/main arm64 libboost1.83-dev arm64 1.83.0-3.2 [10.6 MB] Get:182 http://localhost:3142/debian sid/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get:183 http://localhost:3142/debian sid/main arm64 libbrotli1 arm64 1.1.0-2+b4 [292 kB] Get:184 http://localhost:3142/debian sid/main arm64 libbrotli-dev arm64 1.1.0-2+b4 [308 kB] Get:185 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.47.1-1 [22.8 kB] Get:186 http://localhost:3142/debian sid/main arm64 libcppunit-1.15-0 arm64 1.15.1-4+b1 [144 kB] Get:187 http://localhost:3142/debian sid/main arm64 libcppunit-dev arm64 1.15.1-4+b1 [205 kB] Get:188 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get:189 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get:190 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get:191 http://localhost:3142/debian sid/main arm64 libzstd1 arm64 1.5.6+dfsg-1 [263 kB] Get:192 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1 [84.0 kB] Get:193 http://localhost:3142/debian sid/main arm64 libssl3t64 arm64 3.3.2-1 [2600 kB] Get:194 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get:195 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get:196 http://localhost:3142/debian sid/main arm64 libunistring5 arm64 1.2-1 [402 kB] Get:197 http://localhost:3142/debian sid/main arm64 libidn2-0 arm64 2.3.7-2 [127 kB] Get:198 http://localhost:3142/debian sid/main arm64 libgmp10 arm64 2:6.3.0+dfsg-2+b1 [533 kB] Get:199 http://localhost:3142/debian sid/main arm64 libnettle8t64 arm64 3.10-1 [308 kB] Get:200 http://localhost:3142/debian sid/main arm64 libhogweed6t64 arm64 3.10-1 [331 kB] Get:201 http://localhost:3142/debian sid/main arm64 libffi8 arm64 3.4.6-1 [20.9 kB] Get:202 http://localhost:3142/debian sid/main arm64 libp11-kit0 arm64 0.25.5-2 [406 kB] Get:203 http://localhost:3142/debian sid/main arm64 libtasn1-6 arm64 4.19.0-3+b2 [46.4 kB] Get:204 http://localhost:3142/debian sid/main arm64 libgnutls30t64 arm64 3.8.6-2 [1353 kB] Get:205 http://localhost:3142/debian sid/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-9 [629 kB] Get:206 http://localhost:3142/debian sid/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get:207 http://localhost:3142/debian sid/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get:208 http://localhost:3142/debian sid/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get:209 http://localhost:3142/debian sid/main arm64 libnghttp2-14 arm64 1.63.0-1 [71.2 kB] Get:210 http://localhost:3142/debian sid/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get:211 http://localhost:3142/debian sid/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get:212 http://localhost:3142/debian sid/main arm64 libssh2-1t64 arm64 1.11.0-7 [208 kB] Get:213 http://localhost:3142/debian sid/main arm64 libcurl4t64 arm64 8.10.1-2 [322 kB] Get:214 http://localhost:3142/debian sid/main arm64 libidn2-dev arm64 2.3.7-2 [122 kB] Get:215 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.1-3 [36.2 kB] Get:216 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.1-3 [29.9 kB] Get:217 http://localhost:3142/debian sid/main arm64 pkgconf arm64 1.8.1-3 [26.0 kB] Get:218 http://localhost:3142/debian sid/main arm64 libnghttp2-dev arm64 1.63.0-1 [112 kB] Get:219 http://localhost:3142/debian sid/main arm64 libpsl-dev arm64 0.21.2-1.1 [77.7 kB] Get:220 http://localhost:3142/debian sid/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b1 [329 kB] Get:221 http://localhost:3142/debian sid/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b1 [619 kB] Get:222 http://localhost:3142/debian sid/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10 [169 kB] Get:223 http://localhost:3142/debian sid/main arm64 libunbound8 arm64 1.21.1-1 [549 kB] Get:224 http://localhost:3142/debian sid/main arm64 libgnutls-dane0t64 arm64 3.8.6-2 [436 kB] Get:225 http://localhost:3142/debian sid/main arm64 libgnutls-openssl27t64 arm64 3.8.6-2 [436 kB] Get:226 http://localhost:3142/debian sid/main arm64 libp11-kit-dev arm64 0.25.5-2 [208 kB] Get:227 http://localhost:3142/debian sid/main arm64 libtasn1-6-dev arm64 4.19.0-3+b2 [96.2 kB] Get:228 http://localhost:3142/debian sid/main arm64 nettle-dev arm64 3.10-1 [1323 kB] Get:229 http://localhost:3142/debian sid/main arm64 libgnutls28-dev arm64 3.8.6-2 [1394 kB] Get:230 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB] Get:231 http://localhost:3142/debian sid/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b4 [67.3 kB] Get:232 http://localhost:3142/debian sid/main arm64 libssl-dev arm64 3.3.2-1 [3185 kB] Get:233 http://localhost:3142/debian sid/main arm64 libssh2-1-dev arm64 1.11.0-7 [353 kB] Get:234 http://localhost:3142/debian sid/main arm64 libzstd-dev arm64 1.5.6+dfsg-1 [330 kB] Get:235 http://localhost:3142/debian sid/main arm64 libcurl4-openssl-dev arm64 8.10.1-2 [447 kB] Get:236 http://localhost:3142/debian sid/main arm64 libgfortran5 arm64 14.2.0-6 [361 kB] Get:237 http://localhost:3142/debian sid/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get:238 http://localhost:3142/debian sid/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB] Get:239 http://localhost:3142/debian sid/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB] Get:240 http://localhost:3142/debian sid/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get:241 http://localhost:3142/debian sid/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB] Get:242 http://localhost:3142/debian sid/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB] Get:243 http://localhost:3142/debian sid/main arm64 libjpeg62-turbo arm64 1:2.1.5-3 [172 kB] Get:244 http://localhost:3142/debian sid/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3 [292 kB] Get:245 http://localhost:3142/debian sid/main arm64 libjpeg-dev arm64 1:2.1.5-3 [71.9 kB] Get:246 http://localhost:3142/debian sid/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB] Get:247 http://localhost:3142/debian sid/main arm64 libjsoncpp26 arm64 1.9.6-2 [73.1 kB] Get:248 http://localhost:3142/debian sid/main arm64 libjsoncpp-dev arm64 1.9.6-2 [24.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 235 MB in 3s (88.3 MB/s) Selecting previously unselected package libncursesw6:amd64. 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Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libaom3:amd64 (3.9.1-1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up libicu72:amd64 (72.1-5) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up hdf5-helpers:arm64 (1.10.10+repack-4) ... Setting up libdatrie1:amd64 (0.2.13-3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:arm64 (14.2.0-6) ... Setting up libxcb-render0:amd64 (1.17.0-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up libedit2:amd64 (3.1-20240808-1) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up liblab-gamut1:amd64 (2.42.4-2+b1) ... Setting up libuv1t64:amd64 (1.48.0-6) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel All runlevel operations denied by policy invoke-rc.d: policy-rc.d denied execution of start. Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up libdeflate0:amd64 (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up binutils-aarch64-linux-gnu (2.43.1-5) ... Setting up gcc-14-cross-base (14.2.0-6cross1) ... Setting up libxcb-shm0:amd64 (1.17.0-2) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:amd64 (2.82.1-1) ... No schema files found: doing nothing. Setting up libpkgconf3:amd64 (1.8.1-3) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libsvtav1enc2:amd64 (2.2.1+dfsg-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libjsoncpp26:amd64 (1.9.6-2) ... Setting up libpathplan4:amd64 (2.42.4-2+b1) ... Setting up libann0 (1.1.2+doc-9+b1) ... Setting up libc6-arm64-cross (2.40-3cross1) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up libimagequant0:amd64 (2.18.0-1+b1) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up d-shlibs (0.107) ... Setting up libitm1-arm64-cross (14.2.0-6cross1) ... Setting up pkgconf-bin (1.8.1-3) ... Setting up libncursesw6:amd64 (6.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libltdl7:amd64 (2.4.7-7+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up linux-libc-dev-arm64-cross (6.11.2-1cross1) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdav1d7:amd64 (1.4.3-1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up librav1e0.7:amd64 (0.7.1-7+b1) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-6) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libthai-data (0.1.29-2) ... Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2) ... Setting up cmake-data (3.30.5-1) ... Setting up librhash1:amd64 (1.4.5-1) ... Setting up libcdt5:amd64 (2.42.4-2+b1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libcgraph6:amd64 (2.42.4-2+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up libde265-0:amd64 (1.0.15-1+b2) ... Setting up gcc-14-aarch64-linux-gnu-base:amd64 (14.2.0-6cross1) ... Setting up libyuv0:amd64 (0.0.1888.20240710-3) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libgcc-s1-arm64-cross (14.2.0-6cross1) ... Setting up libatomic1-arm64-cross (14.2.0-6cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblsan0-arm64-cross (14.2.0-6cross1) ... Setting up libllvm19:amd64 (1:19.1.1-1) ... Setting up libice6:amd64 (2:1.0.10-1+b1) ... Setting up libgomp1-arm64-cross (14.2.0-6cross1) ... Setting up gettext (0.22.5-2) ... Setting up libclang1-19 (1:19.1.1-1) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libhwasan0-arm64-cross (14.2.0-6cross1) ... Setting up libc6-dev-arm64-cross (2.40-3cross1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:arm64 (1.8.1-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libstdc++6-arm64-cross (14.2.0-6cross1) ... Setting up dh-autoreconf (20) ... Setting up libthai0:amd64 (0.1.29-2) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libgav1-1:amd64 (0.19.0-2+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up cpp-14-aarch64-linux-gnu (14.2.0-6cross1) ... Setting up groff-base (1.23.0-5) ... Setting up libharfbuzz0b:amd64 (9.0.0-1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libasan8-arm64-cross (14.2.0-6cross1) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up libarchive13t64:amd64 (3.7.4-1) ... Setting up libtsan2-arm64-cross (14.2.0-6cross1) ... Setting up libclang-cpp19 (1:19.1.1-1) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libubsan1-arm64-cross (14.2.0-6cross1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.2-2) ... Setting up cpp-aarch64-linux-gnu (4:14.2.0-1) ... Setting up doxygen (1.9.8+ds-2+b2) ... Setting up libraqm0:amd64 (0.10.1-1+b1) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up libgcc-14-dev-arm64-cross (14.2.0-6cross1) ... Setting up libstdc++-14-dev-arm64-cross (14.2.0-6cross1) ... Setting up cmake (3.30.5-1) ... Setting up gcc-14-aarch64-linux-gnu (14.2.0-6cross1) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Setting up gcc-aarch64-linux-gnu (4:14.2.0-1) ... Setting up libxmu6:amd64 (2:1.1.3-3+b2) ... Setting up g++-14-aarch64-linux-gnu (14.2.0-6cross1) ... Setting up debhelper (13.20) ... Setting up libxaw7:amd64 (2:1.0.14-1+b2) ... Setting up g++-aarch64-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-arm64 (12.12) ... Setting up libheif-plugin-dav1d:amd64 (1.18.2-2) ... Setting up libheif-plugin-libde265:amd64 (1.18.2-2) ... Setting up libheif1:amd64 (1.18.2-2) ... Setting up libgcc-s1:arm64 (14.2.0-6) ... Setting up libgd3:amd64 (2.3.3-12) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up libc6:arm64 (2.40-3) ... Setting up libdb5.3t64:arm64 (5.3.28+dfsg2-9) ... Setting up libffi8:arm64 (3.4.6-1) ... Setting up libhwasan0:arm64 (14.2.0-6) ... Setting up libasan8:arm64 (14.2.0-6) ... Setting up libtasn1-6:arm64 (4.19.0-3+b2) ... Setting up libtsan2:arm64 (14.2.0-6) ... Setting up libtasn1-6-dev:arm64 (4.19.0-3+b2) ... Setting up libstdc++6:arm64 (14.2.0-6) ... Setting up liblsan0:arm64 (14.2.0-6) ... Setting up libitm1:arm64 (14.2.0-6) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libcppunit-1.15-0:arm64 (1.15.1-4+b1) ... Setting up libzstd1:arm64 (1.5.6+dfsg-1) ... Setting up libkeyutils1:arm64 (1.6.3-3) ... Setting up libzstd-dev:arm64 (1.5.6+dfsg-1) ... Setting up libbrotli1:arm64 (1.1.0-2+b4) ... Setting up libnghttp2-14:arm64 (1.63.0-1) ... Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-10) ... Setting up zlib1g:arm64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libcrypt1:arm64 (1:4.4.36-5) ... Setting up libcom-err2:arm64 (1.47.1-1) ... Setting up libgomp1:arm64 (14.2.0-6) ... Setting up libaec0:arm64 (1.1.3-1) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up libnettle8t64:arm64 (3.10-1) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-3) ... Setting up libjsoncpp26:arm64 (1.9.6-2) ... Setting up libgmp10:arm64 (2:6.3.0+dfsg-2+b1) ... Setting up libp11-kit0:arm64 (0.25.5-2) ... Setting up libunistring5:arm64 (1.2-1) ... Setting up libatomic1:arm64 (14.2.0-6) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libgfortran5:arm64 (14.2.0-6) ... Setting up libubsan1:arm64 (14.2.0-6) ... Setting up libhogweed6t64:arm64 (3.10-1) ... Setting up libcrypt-dev:arm64 (1:4.4.36-5) ... Setting up libc6-dev:arm64 (2.40-3) ... Setting up libgcc-14-dev:arm64 (14.2.0-6) ... Setting up libcppunit-dev:arm64 (1.15.1-4+b1) ... Setting up libstdc++-14-dev:arm64 (14.2.0-6) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b4) ... Setting up libp11-kit-dev:arm64 (0.25.5-2) ... Setting up libsz2:arm64 (1.1.3-1) ... Setting up libnghttp2-dev:arm64 (1.63.0-1) ... Setting up libjsoncpp-dev:arm64 (1.9.6-2) ... Setting up libboost1.83-dev:arm64 (1.83.0-3.2) ... Setting up libssl3t64:arm64 (3.3.2-1) ... Setting up libaec-dev:arm64 (1.1.3-1) ... Setting up libidn2-0:arm64 (2.3.7-2) ... Setting up libunbound8:arm64 (1.21.1-1) ... Setting up libgmpxx4ldbl:arm64 (2:6.3.0+dfsg-2+b1) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.1.5-3) ... Setting up libssl-dev:arm64 (3.3.2-1) ... Setting up libidn2-dev:arm64 (2.3.7-2) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libboost-dev:arm64 (1.83.0.2+b2) ... Setting up libssh2-1t64:arm64 (1.11.0-7) ... Setting up libgnutls30t64:arm64 (3.8.6-2) ... Setting up libgnutls-openssl27t64:arm64 (3.8.6-2) ... Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-2+b1) ... Setting up nettle-dev:arm64 (3.10-1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1) ... Setting up libjpeg-dev:arm64 (1:2.1.5-3) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up libpsl-dev:arm64 (0.21.2-1.1) ... Setting up libgnutls-dane0t64:arm64 (3.8.6-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libssh2-1-dev:arm64 (1.11.0-7) ... Setting up libgnutls28-dev:arm64 (3.8.6-2) ... Setting up libcurl4t64:arm64 (8.10.1-2) ... Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ... Setting up libcurl4-openssl-dev:arm64 (8.10.1-2) ... Setting up libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-dev:arm64 (1.10.10+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any-amd64 arm64 loong64 mips64el ppc64el ia64 ppc64 riscv64 sparc64 alpha all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-6 gcc-14_14.2.0-6 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-6 libstdc++-14-dev-arm64-cross_14.2.0-6cross1 libstdc++6_14.2.0-6 libstdc++6-arm64-cross_14.2.0-6cross1 linux-libc-dev_6.11.2-1 Package versions: adduser_3.137 apt_2.9.8 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 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Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: gatb-core Binary: gatb-core, libgatbcore3, libgatbcore-dev, gatb-core-testdata Architecture: any-amd64 arm64 loong64 mips64el ppc64el ia64 ppc64 riscv64 sparc64 alpha all Version: 1.4.2+dfsg-13 Maintainer: Debian Med Packaging Team Uploaders: Nadiya Sitdykova , Andreas Tille Homepage: https://github.com/GATB/gatb-core Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/gatb-core Vcs-Git: https://salsa.debian.org/med-team/gatb-core.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, libhdf5-dev, libopenmpi-dev, pkg-config Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, libcppunit-dev, libhdf5-dev, libboost-dev, libjsoncpp-dev, doxygen, graphviz Package-List: gatb-core deb science optional 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public key dpkg-source: warning: cannot verify inline signature for ./gatb-core_1.4.2+dfsg-13.dsc: no acceptable signature found dpkg-source: info: extracting gatb-core in /<> dpkg-source: info: unpacking gatb-core_1.4.2+dfsg.orig.tar.xz dpkg-source: info: unpacking gatb-core_1.4.2+dfsg-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_hdf5.patch dpkg-source: info: applying fix_hdf5_includes.patch dpkg-source: info: applying dynamic_lib.patch dpkg-source: info: applying fix_install_location.patch dpkg-source: info: applying set_soversion.patch dpkg-source: info: applying dynamic_linking_of_tools.patch dpkg-source: info: applying multiarch.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying avoid_-msse dpkg-source: info: applying use-int-as-return-of-fgetc.patch dpkg-source: info: applying gatbCoreCompileMinia.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.BkOWFVaUc0/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-37e56383-af15-4b0c-865c-04936e0463ae SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package gatb-core dpkg-buildpackage: info: source version 1.4.2+dfsg-13 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --sourcedirectory=gatb-core dh_auto_clean -O--sourcedirectory=gatb-core dh_autoreconf_clean -O--sourcedirectory=gatb-core dh_clean -O--sourcedirectory=gatb-core debian/rules binary-arch dh binary-arch --sourcedirectory=gatb-core dh_update_autotools_config -a -O--sourcedirectory=gatb-core dh_autoreconf -a -O--sourcedirectory=gatb-core debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/aarch64-linux-gnu-pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DBUILD_TESTING:BOOL=OFF ../gatb-core CMake Warning (dev) at CMakeLists.txt:1 (project): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- CppUnit: found headers (in /usr/include) but not the static library (/usr/include/../lib/libcppunit.a) -- CppUnit FOUND (/usr/include) -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed -- Check size of __uint128_t -- Check size of __uint128_t - done -- Options: -std=c++11 -Wno-invalid-offsetof -- HDF5 C compiler wrapper is unable to compile a minimal HDF5 program. -- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so (found version "1.10.10") -- HDF5_LIBRARIES="/usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so" -- OPTIMIZED KMER SIZES INTERVALS ARE 32 64 96 128 <-- max supported kmer size without recompilation CMake Warning (dev) at CMakeLists.txt:199 (set): Cannot set "gatb-core-klist": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- ---------- GATB TESTS ---------- -- ---------- GATB TOOLS ---------- DYNAMIC BINARIES for dbgh5 DYNAMIC BINARIES for dbginfo DYNAMIC BINARIES for leon -- HDF5 C compiler wrapper is unable to compile a minimal HDF5 program. -- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so (found version "1.10.10") found components: C CMake Warning (dev) at CMakeLists.txt:225 (set): Cannot set "gatb-core-flags": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:226 (set): Cannot set "gatb-core-includes": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:227 (set): Cannot set "gatb-core-libraries": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:228 (set): Cannot set "gatb-core-cmake": current scope has no parent. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Configuring done (1.1s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: BUILD_TESTING CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-aarch64-linux-gnu make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' dh_auto_build -a cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<>/gatb-core -B/<>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles /<>/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/depend make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/gatbcore-static.dir/build.make src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp [ 1%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 2%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 3%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 4%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp [ 5%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 6%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:24, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 7%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 8%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp [ 9%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 10%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 11%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 12%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 13%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 14%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 15%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 16%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 17%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 18%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 19%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/HeaderCoder.cpp.o cd 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-I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 20%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -MF 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src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 25%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 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-I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 33%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong 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/<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp [ 37%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp [ 38%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp [ 39%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 40%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 41%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 41%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 42%] Building CXX object src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 43%] Linking CXX static library ../lib/None/libgatbcore.a cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 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"CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o" /usr/bin/aarch64-linux-gnu-ranlib ../lib/None/libgatbcore.a make[4]: Leaving directory '/<>/obj-aarch64-linux-gnu' [ 43%] Built target gatbcore-static make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/depend make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/gatbcore-dynamic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/gatbcore-dynamic.dir/build.make src/CMakeFiles/gatbcore-dynamic.dir/build make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 43%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/Bank.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankAlbum.cpp [ 44%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankBinary.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In function ‘bool gatb::core::bank::impl::checkMagic(FILE*)’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:54:11: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 54 | fread (&value, sizeof(value), 1, file); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp: In member function ‘virtual void gatb::core::bank::impl::BankBinary::Iterator::next()’: /<>/gatb-core/src/gatb/bank/impl/BankBinary.cpp:453:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 453 | fread (_bufferData->getBuffer(), sizeof( char),block_size, binary_read_file); // read a block of reads into the buffer | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankFasta.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankFasta.cpp [ 45%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankHelpers.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankHelpers.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankRandom.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankRandom.cpp [ 46%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankSplitter.cpp.o -c /<>/gatb-core/src/gatb/bank/impl/BankSplitter.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bcalm_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bcalm_algo.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/bglue_algo.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/bglue_algo.cpp [ 47%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/logging.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/logging.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/bcalm2/ograph.cpp.o -c /<>/gatb-core/src/gatb/bcalm2/ograph.cpp [ 48%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Frontline.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Graph.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Graph.cpp [ 50%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/GraphUnitigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.hpp:24, from /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:20: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/IterativeExtensions.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/IterativeExtensions.cpp [ 51%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/LinkTigs.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/LinkTigs.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Simplifications.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Terminator.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Terminator.cpp [ 52%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/Traversal.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/Traversal.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/debruijn/impl/UnitigsConstructionAlgorithm.cpp [ 53%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Configuration.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Configuration.cpp [ 54%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ConfigurationAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ConfigurationAlgorithm.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp [ 55%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/DebloomMinimizerAlgorithm.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/LinearCounter.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/LinearCounter.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp [ 56%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/Model.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/Model.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/ModelData.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/ModelData.cpp [ 57%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartiInfo.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartiInfo.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/RepartitionAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp [ 58%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /<>/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp [ 59%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/System.cpp.o -c /<>/gatb-core/src/gatb/system/impl/System.cpp [ 60%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /<>/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadLinux.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 61%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/system/impl/ThreadMacos.cpp.o -c /<>/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /<>/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/DnaCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/DnaCoder.cpp [ 62%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/HeaderCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/HeaderCoder.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/Leon.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/Leon.cpp [ 63%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/compression/RangeCoder.cpp.o -c /<>/gatb-core/src/gatb/tools/compression/RangeCoder.cpp [ 64%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat 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/<>/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 65%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Progress.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 66%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Property.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Property.cpp [ 67%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 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CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/Tool.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /<>/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 68%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/Storage.cpp.o cd 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-I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /<>/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp [ 69%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization1.cpp.in_128.cpp [ 70%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization1.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 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src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization10.cpp.in_64.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization10.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization10.cpp.in_96.cpp [ 72%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization2.cpp.in_128.cpp [ 73%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization2.cpp.in_32.cpp [ 73%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization2.cpp.in_64.cpp [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization2.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization2.cpp.in_96.cpp [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization3.cpp.in_128.cpp [ 75%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization3.cpp.in_32.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization3.cpp.in_64.cpp [ 76%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization3.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization3.cpp.in_96.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization4.cpp.in_128.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization4.cpp.in_32.cpp [ 77%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization4.cpp.in_64.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization4.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization4.cpp.in_96.cpp [ 78%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization5.cpp.in_128.cpp [ 79%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization5.cpp.in_32.cpp [ 79%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization5.cpp.in_64.cpp [ 80%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization5.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization5.cpp.in_96.cpp [ 80%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_128.cpp [ 80%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_32.cpp [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_64.cpp [ 81%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization6.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization6.cpp.in_96.cpp [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_128.cpp [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_32.cpp [ 82%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_64.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization7.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization7.cpp.in_96.cpp [ 83%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_128.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_32.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_64.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 84%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization8.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp In file included from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:3: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::ltrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:608:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 608 | std::not1(std::ptr_fun(std::isspace)))); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/14/bits/refwrap.h:39, from /usr/aarch64-linux-gnu/include/c++/14/vector:68, from /<>/gatb-core/src/gatb/debruijn/impl/Graph.hpp:30, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.hpp:25, from /<>/gatb-core/src/gatb/debruijn/impl/Simplifications.cpp:40, from /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization8.cpp.in_96.cpp:1: /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp: In function ‘std::string& gatb::core::debruijn::impl::rtrim(std::string&)’: /<>/gatb-core/src/gatb/debruijn/impl/GraphUnitigs.cpp:615:45: warning: ‘std::pointer_to_unary_function<_Arg, _Result> std::ptr_fun(_Result (*)(_Arg)) [with _Arg = int; _Result = int]’ is deprecated: use 'std::function' instead [-Wdeprecated-declarations] 615 | std::not1(std::ptr_fun(std::isspace))).base(), s.end()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/aarch64-linux-gnu/include/c++/14/bits/stl_function.h:1123:5: note: declared here 1123 | ptr_fun(_Result (*__x)(_Arg)) | ^~~~~~~ [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_128.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_128.cpp [ 85%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_32.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_32.cpp [ 86%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_64.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_64.cpp [ 86%] Building CXX object src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -Dgatbcore_dynamic_EXPORTS -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++11 -Wno-invalid-offsetof -MD -MT src/CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -MF CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o.d -o CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o -c /<>/obj-aarch64-linux-gnu/src/gatb/template/TemplateSpecialization9.cpp.in_96.cpp [ 86%] Linking CXX shared library ../lib/None/libgatbcore.so cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-dynamic.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libgatbcore.so.3 -o ../lib/None/libgatbcore.so.3 "CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/Bank.cpp.o" "CMakeFiles/gatbcore-dynamic.dir/gatb/bank/impl/BankAlbum.cpp.o" 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"CMakeFiles/gatbcore-dynamic.dir/gatb/template/TemplateSpecialization9.cpp.in_96.cpp.o" cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library ../lib/None/libgatbcore.so.3 ../lib/None/libgatbcore.so.3 ../lib/None/libgatbcore.so make[4]: Leaving directory '/<>/obj-aarch64-linux-gnu' [ 86%] Built target gatbcore-dynamic make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/depend make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/gatb-core /<>/gatb-core/test/unit /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/test/unit /<>/obj-aarch64-linux-gnu/test/unit/CMakeFiles/gatb-core-cppunit.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f test/unit/CMakeFiles/gatb-core-cppunit.dir/build.make test/unit/CMakeFiles/gatb-core-cppunit.dir/build make[4]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 86%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o cd /<>/obj-aarch64-linux-gnu/test/unit && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -MF CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o.d -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestBank.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestBank.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o cd /<>/obj-aarch64-linux-gnu/test/unit && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-invalid-offsetof -MD -MT test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -MF CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o.d -o CMakeFiles/gatb-core-cppunit.dir/src/bank/TestLeon.cpp.o -c /<>/gatb-core/test/unit/src/bank/TestLeon.cpp [ 87%] Building CXX object test/unit/CMakeFiles/gatb-core-cppunit.dir/src/bank/TestSequence.cpp.o cd /<>/obj-aarch64-linux-gnu/test/unit && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/obj-aarch64-linux-gnu/include -I/<>/obj-aarch64-linux-gnu/include/None -I/<>/gatb-core/src -I/<>/gatb-core/thirdparty -I/<>/gatb-core/test/unit/src -g -O2 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/<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn4.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn3.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn27.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn26.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn25.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn24.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn23.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn22.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn21.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn20.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn2.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn19.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn18.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn17.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn16.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn15.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn14.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn13.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn12.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn11.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn10.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/debruijn/debruijn1.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank9.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank8.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank7.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank6.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank5.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank4.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank3.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank28.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank27.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank26.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank25.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank24.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank23.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank22.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank21.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank20.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank2.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank19.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank18.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank17.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank16.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank15.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank14.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank13.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank12.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank11.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank10.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/bank/bank1.cpp -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/README.md -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/Makefile -- Installing: /<>/debian/tmp/usr/share/doc/gatb-core/examples/CMakeLists.txt -- Installing: /<>/debian/tmp/usr/./README.txt -- Installing: /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.a -- Installing: /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 -- Installing: /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.so -- Installing: /<>/debian/tmp/usr/include -- Installing: /<>/debian/tmp/usr/include/gatb -- Installing: /<>/debian/tmp/usr/include/gatb/tools -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/StorageHDF5.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/CollectionHDF5Patch.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/CollectionHDF5.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/StorageTools.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/StorageFile.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/Storage.tpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/Storage.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/CollectionFile.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/impl/Cell.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/api -- Installing: /<>/debian/tmp/usr/include/gatb/tools/storage/api/ICell.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/XmlReader.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Tool.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Tokenizer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/TimeInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Stringify.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/StringLine.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Property.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Progress.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Pool.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/OptionsParser.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/LibraryInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/HostInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Histogram.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/impl/Algorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/IHistogram.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Abundance.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Vector.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/StringsRepository.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Range.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Macros.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/IProperty.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/IOptionsParser.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Enums.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/misc/api/Data.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/NativeInt8.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/NativeInt64.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/NativeInt32.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/NativeInt16.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/NativeInt128.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/LargeInt.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/LargeInt2.pri -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/LargeInt1.pri -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/Integer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/math/FastMinimizer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/impl -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/impl/Observer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/impl/IteratorHelpers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/impl/Command.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/api -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/api/Iterator.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/api/IObserver.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/designpattern/api/ICommand.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression/RangeCoder.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression/Leon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression/HeaderCoder.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression/DnaCoder.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/compression/CompressionUtils.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/OAHash.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/MapMPHF.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/IteratorFile.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/IterableHelpers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/Hash16.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/ContainerSet.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/CollectionCache.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/CollectionAbstract.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BooPHF.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BloomGroup.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/Bloom.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagPartition.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagFile.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/impl/BagCache.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Iterable.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Container.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Collection.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/tools/collections/api/Bag.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/template -- Installing: /<>/debian/tmp/usr/include/gatb/system -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/TimeCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/ThreadMacos.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/ThreadLinux.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/SystemInfoCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/System.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/MemoryCommon.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemMacos.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/impl/FileSystemLinux.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/types.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/config_sha1.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ITime.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IThread.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ISystemInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/ISmartPointer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IMemory.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/IFileSystem.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/Exception.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/SortingCountAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Sequence2SuperKmer.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/RepartitionAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/PartitionsCommand.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/PartiInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Model.pri -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Model.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/MPHFAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/LinearCounter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomMinimizerAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithmFactory.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithm.pri -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/DebloomAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorSolidity.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorProxy.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorHistogram.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorDump.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorCutoff.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorChain.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessorAbstract.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/CountProcessor.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/ConfigurationAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/Configuration.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BloomBuilder.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BloomAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BankKmers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/impl/BankKmerIterator.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api/IModel.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/kmer/api/ICountProcessor.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/gatb_core.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/GraphUnitigs.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Graph.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/rank_vector.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/dag_vector.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/UnitigsConstructionAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Traversal.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Terminator.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Simplifications.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/NodesDeleter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/LinkTigs.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/IterativeExtensions.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/Frontline.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/ExtremityInfo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/ContainerNode.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/impl/BranchingAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/api -- Installing: /<>/debian/tmp/usr/include/gatb/debruijn/api/IContainerNode.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2 -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/unionFind.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ographBin.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ograph.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/logging.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/binSeq.h -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/bglue_algo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/bcalm_algo.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bcalm2/ThreadPool.h -- Installing: /<>/debian/tmp/usr/include/gatb/bank -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Banks.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankStrings.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankSplitter.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankRandom.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankHelpers.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankFasta.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankConverterAlgorithm.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankComposite.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankBinary.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/BankAlbum.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Bank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/Alphabet.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/impl/AbstractBank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/Sequence.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/IBank.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/bank/api/IAlphabet.hpp -- Installing: /<>/debian/tmp/usr/include/gatb/system/api/config.hpp -- Installing: /<>/debian/tmp/usr/test/gatb-core-cppunit -- Set non-toolchain portion of runtime path of "/<>/debian/tmp/usr/test/gatb-core-cppunit" to "" -- Installing: /<>/debian/tmp/usr/test//db -- Installing: /<>/debian/tmp/usr/test//db/sample2.fa -- Installing: /<>/debian/tmp/usr/test//db/sample1.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/sample1.fa -- Installing: /<>/debian/tmp/usr/test//db/sample.fastq.gz -- Installing: /<>/debian/tmp/usr/test//db/sample.fastq -- Installing: /<>/debian/tmp/usr/test//db/reads3.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/reads2.fa -- Installing: /<>/debian/tmp/usr/test//db/reads1_list_ids.txt -- Installing: /<>/debian/tmp/usr/test//db/reads1.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/reads1.fa -- Installing: /<>/debian/tmp/usr/test//db/query.fa.gz -- Installing: /<>/debian/tmp/usr/test//db/query.fa -- Installing: /<>/debian/tmp/usr/test//db/microsnp.fa -- Installing: /<>/debian/tmp/usr/test//db/leon2.fastq.leon-ref -- Installing: /<>/debian/tmp/usr/test//db/leon2.fastq -- Installing: /<>/debian/tmp/usr/test//db/leon1.fastq.leon-ref -- Installing: /<>/debian/tmp/usr/test//db/leon1.fastq -- Installing: /<>/debian/tmp/usr/test//db/celegans_reads.h5 -- Installing: /<>/debian/tmp/usr/test//db/album.txt -- Installing: /<>/debian/tmp/usr/test//db/README.md -- Installing: /<>/debian/tmp/usr/bin/dbgh5 -- Set non-toolchain portion of runtime path of "/<>/debian/tmp/usr/bin/dbgh5" to "" -- Installing: /<>/debian/tmp/usr/bin/dbginfo -- Set non-toolchain portion of runtime path of "/<>/debian/tmp/usr/bin/dbginfo" to "" -- Installing: /<>/debian/tmp/usr/bin/leon -- Set non-toolchain portion of runtime path of "/<>/debian/tmp/usr/bin/leon" to "" -- Installing: /<>/debian/tmp/usr/include/BooPHF -- Installing: /<>/debian/tmp/usr/include/BooPHF/BooPHF.h make[1]: Leaving directory '/<>/obj-aarch64-linux-gnu' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ --movedev gatb-core/cmake usr/lib \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libgatbcore-dev/usr/lib/aarch64-linux-gnu install -d -m 755 debian/libgatbcore3/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.a debian/libgatbcore-dev/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.so debian/libgatbcore-dev/usr/lib/aarch64-linux-gnu mv /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 debian/libgatbcore3/usr/lib/aarch64-linux-gnu PKGDEV=libgatbcore-dev PKGSHL=libgatbcore3 install -d -m 755 debian/libgatbcore-dev/usr mv debian/tmp/usr/include debian/libgatbcore-dev/usr install -d -m 755 debian/libgatbcore-dev/usr/lib/aarch64-linux-gnu mv gatb-core/cmake debian/libgatbcore-dev/usr/lib/aarch64-linux-gnu mkdir -p debian/gatb-core/usr/lib/gatb-core dh_install -a make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=gatb-core dh_installchangelogs -a -O--sourcedirectory=gatb-core dh_installexamples -a -O--sourcedirectory=gatb-core dh_installman -a -O--sourcedirectory=gatb-core dh_installsystemduser -a -O--sourcedirectory=gatb-core dh_perl -a -O--sourcedirectory=gatb-core dh_link -a -O--sourcedirectory=gatb-core dh_strip_nondeterminism -a -O--sourcedirectory=gatb-core dh_compress -a -O--sourcedirectory=gatb-core dh_fixperms -a -O--sourcedirectory=gatb-core debian/rules override_dh_missing make[1]: Entering directory '/<>' # test data are installed manually from main source to enable Architecture all builds rm -rf debian/tmp/usr/test/db dh_missing make[1]: Leaving directory '/<>' dh_dwz -a -O--sourcedirectory=gatb-core dh_strip -a -O--sourcedirectory=gatb-core debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' dh_makeshlibs # For whatever reason some symbol version has added Debian revision which leads to # E: libgatbcore3: symbols-file-contains-current-version-with-debian-revision on symbol _ZNSt6vectorImSaImEE9push_backERKm@Base (libgatbcore.so.3) [symbols] # This override is cleaning up the symbols file find debian -name "*symbols*" -exec sed -i 's/+dfsg-[0-9]\+$//' \{\} \; make[1]: Leaving directory '/<>' dh_shlibdeps -a -O--sourcedirectory=gatb-core dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: symbol gzrewind used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Aread used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Gclose used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Fopen used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Tset_size used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Aopen used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Dset_extent used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5Sselect_hyperslab used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5check_version used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: symbol H5P_CLS_DATASET_CREATE_ID_g used by debian/libgatbcore3/usr/lib/aarch64-linux-gnu/libgatbcore.so.3 found in none of the libraries dpkg-shlibdeps: warning: 55 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--sourcedirectory=gatb-core dh_gencontrol -a -O--sourcedirectory=gatb-core dh_md5sums -a -O--sourcedirectory=gatb-core dh_builddeb -a -O--sourcedirectory=gatb-core dpkg-deb: building package 'gatb-core' in '../gatb-core_1.4.2+dfsg-13_arm64.deb'. dpkg-deb: building package 'gatb-core-dbgsym' in '../gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb'. dpkg-deb: building package 'libgatbcore3' in '../libgatbcore3_1.4.2+dfsg-13_arm64.deb'. dpkg-deb: building package 'libgatbcore3-dbgsym' in '../libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb'. dpkg-deb: building package 'libgatbcore-dev' in '../libgatbcore-dev_1.4.2+dfsg-13_arm64.deb'. dpkg-genbuildinfo --build=any -O../gatb-core_1.4.2+dfsg-13_arm64.buildinfo dpkg-genchanges --build=any -O../gatb-core_1.4.2+dfsg-13_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-10-16T01:43:10Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ gatb-core_1.4.2+dfsg-13_arm64.changes: -------------------------------------- Format: 1.8 Date: Tue, 09 Jan 2024 20:48:47 +0100 Source: gatb-core Binary: gatb-core gatb-core-dbgsym libgatbcore-dev libgatbcore3 libgatbcore3-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.4.2+dfsg-13 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: gatb-core - Genome Analysis Toolbox with de-Bruijn graph libgatbcore-dev - development library of the Genome Analysis Toolbox libgatbcore3 - dynamic library of the Genome Analysis Toolbox Closes: 1058714 Changes: gatb-core (1.4.2+dfsg-13) unstable; urgency=medium . * Add build support for loongarch64 Closes: #1058714 * Cleanup symbols file manually Checksums-Sha1: bdcbee39e9cf61d2fb0759532e1420aa7d5e8c22 124931736 gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb 160d18be327c1d87c0cf8d1708e8f5eb8a00c2d9 10727 gatb-core_1.4.2+dfsg-13_arm64.buildinfo 9e2d7a699fd0250d4a6099780f6fca328880cd3d 3023564 gatb-core_1.4.2+dfsg-13_arm64.deb 77eca35a6d7767d0d955d9f3f0c08d2c58520c6f 3994656 libgatbcore-dev_1.4.2+dfsg-13_arm64.deb acd60ae829b58370badc94a503ba73207c4589f1 48292652 libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb 92942f656107557ce3db4950fa7cfee197350cfd 1617500 libgatbcore3_1.4.2+dfsg-13_arm64.deb Checksums-Sha256: 6e2aaa36669c5f55fb9ac4e7da87f274ff88d3f3ee63be859a21ab2042d399bf 124931736 gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb f07a099b2781d19b38feca5575f169da30b07c0a55088ec80ff88e9c6617333e 10727 gatb-core_1.4.2+dfsg-13_arm64.buildinfo 846f56b480b52e9293dbee5f81c18e0a32d0447f3f855151077c861f866e92aa 3023564 gatb-core_1.4.2+dfsg-13_arm64.deb 7ed32d06046de22a7b11c95af355688c7d2d5532ba23266a01662992ca1d1f1a 3994656 libgatbcore-dev_1.4.2+dfsg-13_arm64.deb 65672b23b97fd0ec60da89698f5fc58209a4a934fe362d0c8196067b0f4b1421 48292652 libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb e92eef49ed46b29d81888760b48f26b78d3e824c75d2bb830d106c0ca374289b 1617500 libgatbcore3_1.4.2+dfsg-13_arm64.deb Files: a8299f48ad0a37d33cb0f8bfb594820d 124931736 debug optional gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb 9170708757c160ebc0e75e37b98bfb4f 10727 science optional gatb-core_1.4.2+dfsg-13_arm64.buildinfo a67a6a61362ab298d816d26a19209edb 3023564 science optional gatb-core_1.4.2+dfsg-13_arm64.deb 62809a6a55c06a90f1d7c2305be80309 3994656 libdevel optional libgatbcore-dev_1.4.2+dfsg-13_arm64.deb 121b8698bf3b3152bf308e49ea8ba303 48292652 debug optional libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb 9ef915d1b56b105ed55d569236137bf7 1617500 libs optional libgatbcore3_1.4.2+dfsg-13_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: gatb-core Binary: gatb-core gatb-core-dbgsym libgatbcore-dev libgatbcore3 libgatbcore3-dbgsym Architecture: arm64 Version: 1.4.2+dfsg-13 Checksums-Md5: a8299f48ad0a37d33cb0f8bfb594820d 124931736 gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb a67a6a61362ab298d816d26a19209edb 3023564 gatb-core_1.4.2+dfsg-13_arm64.deb 62809a6a55c06a90f1d7c2305be80309 3994656 libgatbcore-dev_1.4.2+dfsg-13_arm64.deb 121b8698bf3b3152bf308e49ea8ba303 48292652 libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb 9ef915d1b56b105ed55d569236137bf7 1617500 libgatbcore3_1.4.2+dfsg-13_arm64.deb Checksums-Sha1: bdcbee39e9cf61d2fb0759532e1420aa7d5e8c22 124931736 gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb 9e2d7a699fd0250d4a6099780f6fca328880cd3d 3023564 gatb-core_1.4.2+dfsg-13_arm64.deb 77eca35a6d7767d0d955d9f3f0c08d2c58520c6f 3994656 libgatbcore-dev_1.4.2+dfsg-13_arm64.deb acd60ae829b58370badc94a503ba73207c4589f1 48292652 libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb 92942f656107557ce3db4950fa7cfee197350cfd 1617500 libgatbcore3_1.4.2+dfsg-13_arm64.deb Checksums-Sha256: 6e2aaa36669c5f55fb9ac4e7da87f274ff88d3f3ee63be859a21ab2042d399bf 124931736 gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb 846f56b480b52e9293dbee5f81c18e0a32d0447f3f855151077c861f866e92aa 3023564 gatb-core_1.4.2+dfsg-13_arm64.deb 7ed32d06046de22a7b11c95af355688c7d2d5532ba23266a01662992ca1d1f1a 3994656 libgatbcore-dev_1.4.2+dfsg-13_arm64.deb 65672b23b97fd0ec60da89698f5fc58209a4a934fe362d0c8196067b0f4b1421 48292652 libgatbcore3-dbgsym_1.4.2+dfsg-13_arm64.deb e92eef49ed46b29d81888760b48f26b78d3e824c75d2bb830d106c0ca374289b 1617500 libgatbcore3_1.4.2+dfsg-13_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 16 Oct 2024 01:43:07 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: adduser (= 3.137), apt (= 2.9.8), autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.4), bash (= 5.2.32-1+b1), binutils (= 2.43.1-5), binutils-common (= 2.43.1-5), binutils-x86-64-linux-gnu (= 2.43.1-5), bsdextrautils (= 2.40.2-9), bsdutils (= 1:2.40.2-9), build-essential (= 12.12), bzip2 (= 1.0.8-6), cmake (= 3.30.5-1), cmake-data (= 3.30.5-1), coreutils (= 9.4-3.1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-6), cpp-14-x86-64-linux-gnu (= 14.2.0-6), cpp-x86-64-linux-gnu (= 4:14.2.0-1), d-shlibs (= 0.107), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.20), debian-archive-keyring (= 2023.4), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), doxygen (= 1.9.8+ds-2+b2), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-3), fontconfig (= 2.15.0-1.1), fontconfig-config (= 2.15.0-1.1), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-6), g++-14-x86-64-linux-gnu (= 14.2.0-6), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-6), gcc-14-base (= 14.2.0-6), gcc-14-x86-64-linux-gnu (= 14.2.0-6), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), gpgv (= 2.2.44-1), graphviz (= 2.42.4-2+b1), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hdf5-helpers (= 1.10.10+repack-4), hostname (= 3.25), init-system-helpers (= 1.67), intltool-debian (= 0.35.0+20060710.6), libabsl20230802 (= 20230802.1-4), libacl1 (= 2.3.2-2), libaec-dev (= 1.1.3-1), libaec0 (= 1.1.3-1), libann0 (= 1.1.2+doc-9+b1), libaom3 (= 3.9.1-1), libapt-pkg6.0t64 (= 2.9.8), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.7.4-1), libasan8 (= 14.2.0-6), libatomic1 (= 14.2.0-6), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.1-1), libaudit1 (= 1:4.0.1-1), libavif16 (= 1.1.1-1), libbinutils (= 2.43.1-5), libblkid1 (= 2.40.2-9), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-3.2), libbrotli-dev (= 1.1.0-2+b4), libbrotli1 (= 1.1.0-2+b4), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-3), libc-dev-bin (= 2.40-3), libc6 (= 2.40-3), libc6-dev (= 2.40-3), libcairo2 (= 1.18.2-2), libcap-ng0 (= 0.8.5-2), libcap2 (= 1:2.66-5), libcc1-0 (= 14.2.0-6), libcdt5 (= 2.42.4-2+b1), libcgraph6 (= 2.42.4-2+b1), libclang-cpp19 (= 1:19.1.1-1), libclang1-19 (= 1:19.1.1-1), libcom-err2 (= 1.47.1-1), libcppunit-1.15-0 (= 1.15.1-4+b1), libcppunit-dev (= 1.15.1-4+b1), libcrypt-dev (= 1:4.4.36-5), libcrypt1 (= 1:4.4.36-5), libctf-nobfd0 (= 2.43.1-5), libctf0 (= 2.43.1-5), libcurl4-openssl-dev (= 8.10.1-2), libcurl4t64 (= 8.10.1-2), libdatrie1 (= 0.2.13-3), libdav1d7 (= 1.4.3-1), libdb5.3t64 (= 5.3.28+dfsg2-9), libde265-0 (= 1.0.15-1+b2), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.20), libdeflate0 (= 1.22-1), libdpkg-perl (= 1.22.11), libedit2 (= 3.1-20240808-1), libelf1t64 (= 0.191-2), libevent-2.1-7t64 (= 2.1.12-stable-10), libexpat1 (= 2.6.3-1), libffi8 (= 3.4.6-1), libfile-stripnondeterminism-perl (= 1.14.0-1), libfmt9 (= 9.1.0+ds1-2), libfontconfig1 (= 2.15.0-1.1), libfreetype6 (= 2.13.3+dfsg-1), libfribidi0 (= 1.0.15-1), libgav1-1 (= 0.19.0-2+b1), libgcc-14-dev (= 14.2.0-6), libgcc-s1 (= 14.2.0-6), libgcrypt20 (= 1.11.0-6), libgd3 (= 2.3.3-12), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran5 (= 14.2.0-6), libglib2.0-0t64 (= 2.82.1-1), libgmp-dev (= 2:6.3.0+dfsg-2+b1), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgmpxx4ldbl (= 2:6.3.0+dfsg-2+b1), libgnutls-dane0t64 (= 3.8.6-2), libgnutls-openssl27t64 (= 3.8.6-2), libgnutls28-dev (= 3.8.6-2), libgnutls30t64 (= 3.8.6-2), libgomp1 (= 14.2.0-6), libgpg-error0 (= 1.50-4), libgprofng0 (= 2.43.1-5), libgraphite2-3 (= 1.3.14-2), libgssapi-krb5-2 (= 1.21.3-3), libgts-0.7-5t64 (= 0.7.6+darcs121130-5.2), libgvc6 (= 2.42.4-2+b1), libgvpr2 (= 2.42.4-2+b1), libharfbuzz0b (= 9.0.0-1), libhdf5-103-1t64 (= 1.10.10+repack-4), libhdf5-cpp-103-1t64 (= 1.10.10+repack-4), libhdf5-dev (= 1.10.10+repack-4), libhdf5-fortran-102t64 (= 1.10.10+repack-4), libhdf5-hl-100t64 (= 1.10.10+repack-4), libhdf5-hl-cpp-100t64 (= 1.10.10+repack-4), libhdf5-hl-fortran-100t64 (= 1.10.10+repack-4), libheif-plugin-dav1d (= 1.18.2-2), libheif-plugin-libde265 (= 1.18.2-2), libheif1 (= 1.18.2-2), libhogweed6t64 (= 3.10-1), libhwasan0 (= 14.2.0-6), libice6 (= 2:1.0.10-1+b1), libicu72 (= 72.1-5), libidn2-0 (= 2.3.7-2), libidn2-dev (= 2.3.7-2), libimagequant0 (= 2.18.0-1+b1), libisl23 (= 0.27-1), libitm1 (= 14.2.0-6), libjansson4 (= 2.14-2+b2), libjbig0 (= 2.1-6.1+b1), libjpeg-dev (= 1:2.1.5-3), libjpeg62-turbo (= 1:2.1.5-3), libjpeg62-turbo-dev (= 1:2.1.5-3), libjsoncpp-dev (= 1.9.6-2), libjsoncpp26 (= 1.9.6-2), libk5crypto3 (= 1.21.3-3), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.21.3-3), libkrb5support0 (= 1.21.3-3), liblab-gamut1 (= 2.42.4-2+b1), libldap-2.5-0 (= 2.5.18+dfsg-3+b1), liblerc4 (= 4.0.0+ds-4+b1), libllvm19 (= 1:19.1.1-1), liblsan0 (= 14.2.0-6), libltdl7 (= 2.4.7-7+b1), liblz4-1 (= 1.9.4-3), liblzma5 (= 5.6.2-2), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.2-9), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libncursesw6 (= 6.5-2), libnettle8t64 (= 3.10-1), libnghttp2-14 (= 1.63.0-1), libnghttp2-dev (= 1.63.0-1), libp11-kit-dev (= 0.25.5-2), libp11-kit0 (= 0.25.5-2), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpango-1.0-0 (= 1.54.0+ds-2), libpangocairo-1.0-0 (= 1.54.0+ds-2), libpangoft2-1.0-0 (= 1.54.0+ds-2), libpathplan4 (= 2.42.4-2+b1), libpcre2-8-0 (= 10.42-4+b1), libperl5.40 (= 5.40.0-6), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.42.2-1+b1), libpkgconf3 (= 1.8.1-3), libpng16-16t64 (= 1.6.44-2), libproc2-0 (= 2:4.0.4-6), libpsl-dev (= 0.21.2-1.1), libpsl5t64 (= 0.21.2-1.1), libquadmath0 (= 14.2.0-6), libraqm0 (= 0.10.1-1+b1), librav1e0.7 (= 0.7.1-7+b1), librhash1 (= 1.4.5-1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-8), libsasl2-modules-db (= 2.1.28+dfsg1-8), libseccomp2 (= 2.5.5-1+b1), libselinux1 (= 3.7-3), libsemanage-common (= 3.7-2), libsemanage2 (= 3.7-2), libsepol2 (= 3.7-1), libsframe1 (= 2.43.1-5), libsharpyuv0 (= 1.4.0-0.1), libsm6 (= 2:1.2.3-1+b1), libsmartcols1 (= 2.40.2-9), libsqlite3-0 (= 3.46.1-1), libssh2-1-dev (= 1.11.0-7), libssh2-1t64 (= 1.11.0-7), libssl-dev (= 3.3.2-1), libssl3t64 (= 3.3.2-1), libstdc++-14-dev (= 14.2.0-6), libstdc++6 (= 14.2.0-6), libsvtav1enc2 (= 2.2.1+dfsg-2), libsystemd0 (= 256.7-1), libsz2 (= 1.1.3-1), libtasn1-6 (= 4.19.0-3+b2), libtasn1-6-dev (= 4.19.0-3+b2), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2), libtiff6 (= 4.5.1+git230720-5), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtsan2 (= 14.2.0-6), libubsan1 (= 14.2.0-6), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256.7-1), libunbound8 (= 1.21.1-1), libunistring5 (= 1.2-1), libuuid1 (= 2.40.2-9), libuv1t64 (= 1.48.0-6), libwebp7 (= 1.4.0-0.1), libx11-6 (= 2:1.8.7-1+b1), libx11-data (= 2:1.8.7-1), libxapian30 (= 1.4.25-1), libxau6 (= 1:1.0.9-1+b1), libxaw7 (= 2:1.0.14-1+b2), libxcb-render0 (= 1.17.0-2), libxcb-shm0 (= 1.17.0-2), libxcb1 (= 1.17.0-2), libxdmcp6 (= 1:1.1.2-3+b1), libxext6 (= 2:1.3.4-1+b2), libxml2 (= 2.12.7+dfsg+really2.9.14-0.1), libxmu6 (= 2:1.1.3-3+b2), libxpm4 (= 1:3.5.17-1+b1), libxrender1 (= 1:0.9.10-1.1+b1), libxt6t64 (= 1:1.2.1-1.2), libxxhash0 (= 0.8.2-2+b1), libyuv0 (= 0.0.1888.20240710-3), libz3-4 (= 4.8.12-3.1+b2), libzstd-dev (= 1.5.6+dfsg-1), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.11.2-1), login.defs (= 1:4.16.0-4), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), nettle-dev (= 3.10-1), openssl-provider-legacy (= 3.3.2-1), passwd (= 1:4.16.0-4), patch (= 2.7.6-7), perl (= 5.40.0-6), perl-base (= 5.40.0-6), perl-modules-5.40 (= 5.40.0-6), pkgconf (= 1.8.1-3), pkgconf-bin (= 1.8.1-3), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-6), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.10-3), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.2-9), x11-common (= 1:7.7+23.1), xz-utils (= 5.6.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1704829727" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ gatb-core-dbgsym_1.4.2+dfsg-13_arm64.deb ---------------------------------------- new Debian package, version 2.0. size 124931736 bytes: control archive=756 bytes. 516 bytes, 12 lines control 511 bytes, 5 lines md5sums Package: gatb-core-dbgsym Source: gatb-core Version: 1.4.2+dfsg-13 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 132163 Depends: gatb-core (= 1.4.2+dfsg-13) Section: debug Priority: optional Description: debug symbols for gatb-core Build-Ids: 7895b1465e4ebae2905325f315cac08b2d5dd216 7f676b102bae1962e90e457ded8a3e85c0062a85 c9d812ea735736baaf69f4b3b544964d3585d79d ee0d9a56f27e27477cac46ebe26c7cda20a22c77 drwxr-xr-x root/root 0 2024-01-09 19:48 ./ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/78/ -rw-r--r-- root/root 38299752 2024-01-09 19:48 ./usr/lib/debug/.build-id/78/95b1465e4ebae2905325f315cac08b2d5dd216.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/7f/ -rw-r--r-- root/root 48148344 2024-01-09 19:48 ./usr/lib/debug/.build-id/7f/676b102bae1962e90e457ded8a3e85c0062a85.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/c9/ -rw-r--r-- root/root 38352440 2024-01-09 19:48 ./usr/lib/debug/.build-id/c9/d812ea735736baaf69f4b3b544964d3585d79d.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/ee/ -rw-r--r-- root/root 5462120 2024-01-09 19:48 ./usr/lib/debug/.build-id/ee/0d9a56f27e27477cac46ebe26c7cda20a22c77.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 5053632 2024-01-09 19:48 ./usr/lib/debug/.dwz/aarch64-linux-gnu/gatb-core.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-09 19:48 ./usr/share/doc/gatb-core-dbgsym -> gatb-core gatb-core_1.4.2+dfsg-13_arm64.deb --------------------------------- new Debian package, version 2.0. size 3023564 bytes: control archive=1224 bytes. 1055 bytes, 21 lines control 623 bytes, 10 lines md5sums Package: gatb-core Version: 1.4.2+dfsg-13 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 21895 Depends: libc6 (>= 2.38), libcppunit-1.15-0 (>= 1.15.1), libgcc-s1 (>= 3.0), libhdf5-103-1t64, libstdc++6 (>= 14), zlib1g (>= 1:1.2.6) Section: science Priority: optional Homepage: https://github.com/GATB/gatb-core Description: Genome Analysis Toolbox with de-Bruijn graph The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/bin/ -rwxr-xr-x root/root 6425352 2024-01-09 19:48 ./usr/bin/dbgh5 -rwxr-xr-x root/root 6359800 2024-01-09 19:48 ./usr/bin/dbginfo -rwxr-xr-x root/root 1575560 2024-01-09 19:48 ./usr/bin/leon drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/gatb-core/ -rwxr-xr-x root/root 8002240 2024-01-09 19:48 ./usr/lib/gatb-core/gatb-core-cppunit drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/gatb-core/ -rw-r--r-- root/root 3802 2020-04-12 21:15 ./usr/share/doc/gatb-core/README.txt -rw-r--r-- root/root 1785 2024-01-09 19:48 ./usr/share/doc/gatb-core/changelog.Debian.gz -rw-r--r-- root/root 34732 2024-01-09 19:48 ./usr/share/doc/gatb-core/copyright drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/man/man1/ -rw-r--r-- root/root 1391 2024-01-09 19:48 ./usr/share/man/man1/dbgh5.1.gz -rw-r--r-- root/root 300 2024-01-09 19:48 ./usr/share/man/man1/dbginfo.1.gz -rw-r--r-- root/root 652 2024-01-09 19:48 ./usr/share/man/man1/leon.1.gz libgatbcore-dev_1.4.2+dfsg-13_arm64.deb --------------------------------------- new Debian package, version 2.0. size 3994656 bytes: control archive=7884 bytes. 1101 bytes, 26 lines control 24147 bytes, 283 lines md5sums Package: libgatbcore-dev Source: gatb-core Version: 1.4.2+dfsg-13 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 76442 Depends: libgatbcore3 (= 1.4.2+dfsg-13) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/GATB/gatb-core Description: development library of the Genome Analysis Toolbox The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/ . This package contains the static library and the header files of the gatb-core library. drwxr-xr-x root/root 0 2024-01-09 19:48 ./ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/BooPHF/ -rw-r--r-- root/root 33926 2024-01-09 19:48 ./usr/include/BooPHF/BooPHF.h drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/gatb/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/gatb/bank/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/gatb/bank/api/ -rw-r--r-- root/root 2480 2020-04-12 21:15 ./usr/include/gatb/bank/api/IAlphabet.hpp -rw-r--r-- root/root 7592 2020-04-12 21:15 ./usr/include/gatb/bank/api/IBank.hpp -rw-r--r-- root/root 11212 2020-04-12 21:15 ./usr/include/gatb/bank/api/Sequence.hpp drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/include/gatb/bank/impl/ -rw-r--r-- root/root 3647 2020-04-12 21:15 ./usr/include/gatb/bank/impl/AbstractBank.hpp -rw-r--r-- root/root 2453 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0 2024-01-09 19:48 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/debug/.build-id/3a/ -rw-r--r-- root/root 51911088 2024-01-09 19:48 ./usr/lib/debug/.build-id/3a/1f1e97f27edb789ed0bd0d8ad5a48753408a23.debug drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-09 19:48 ./usr/share/doc/libgatbcore3-dbgsym -> libgatbcore3 libgatbcore3_1.4.2+dfsg-13_arm64.deb ------------------------------------ new Debian package, version 2.0. size 1617500 bytes: control archive=1140 bytes. 1069 bytes, 25 lines control 229 bytes, 3 lines md5sums 43 bytes, 1 lines shlibs 66 bytes, 2 lines triggers Package: libgatbcore3 Source: gatb-core Version: 1.4.2+dfsg-13 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 10481 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 14) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/GATB/gatb-core Description: dynamic library of the Genome Analysis Toolbox The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/ . This package contains the dynamic library. drwxr-xr-x root/root 0 2024-01-09 19:48 ./ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 10684800 2024-01-09 19:48 ./usr/lib/aarch64-linux-gnu/libgatbcore.so.3 drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-09 19:48 ./usr/share/doc/libgatbcore3/ -rw-r--r-- root/root 1787 2024-01-09 19:48 ./usr/share/doc/libgatbcore3/changelog.Debian.gz -rw-r--r-- root/root 34732 2024-01-09 19:48 ./usr/share/doc/libgatbcore3/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1391 B] Get:5 copy:/<>/apt_archive ./ Packages [1470 B] Fetched 3476 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: login mount tzdata Use 'apt autoremove' to remove them. 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libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:arm64 shared-mime-info t1utils ucf unzip 0 upgraded, 145 newly installed, 0 to remove and 0 not upgraded. Need to get 14.8 MB of archives. After this operation, 64.2 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-5 [69.3 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20240203 [158 kB] Get:6 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:7 http://localhost:3142/debian sid/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:8 http://localhost:3142/debian sid/main amd64 libnghttp3-9 amd64 1.4.0-1 [63.1 kB] Get:9 http://localhost:3142/debian sid/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get:10 http://localhost:3142/debian sid/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get:11 http://localhost:3142/debian sid/main amd64 libcurl3t64-gnutls amd64 8.10.1-2 [360 kB] Get:12 http://localhost:3142/debian sid/main amd64 libstemmer0d amd64 2.2.0-4+b1 [119 kB] Get:13 http://localhost:3142/debian sid/main amd64 libxmlb2 amd64 0.3.20-1 [62.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1+b1 [52.6 kB] Get:15 http://localhost:3142/debian sid/main amd64 libappstream5 amd64 1.0.3-1 [224 kB] Get:16 http://localhost:3142/debian sid/main amd64 appstream amd64 1.0.3-1 [468 kB] Get:17 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.66-1 [34.0 kB] Get:18 http://localhost:3142/debian sid/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get:19 http://localhost:3142/debian sid/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:20 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.44-1 [119 kB] Get:21 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.44-1 [527 kB] Get:22 http://localhost:3142/debian sid/main amd64 iso-codes all 4.17.0-1 [3055 kB] Get:23 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:24 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b6 [67.8 kB] Get:25 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:26 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:27 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:28 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:29 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:30 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:31 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:32 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:33 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:34 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:35 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b4 [122 kB] Get:36 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:37 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:38 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.30-1 [105 kB] Get:39 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:40 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:41 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:42 http://localhost:3142/debian sid/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:43 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:44 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:46 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:47 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:48 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:51 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:52 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.38-1+b1 [129 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:54 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:56 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:58 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b4 [32.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:60 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:61 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:62 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:63 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b4 [98.1 kB] Get:64 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:65 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:66 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB] Get:67 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB] Get:68 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:69 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:71 http://localhost:3142/debian sid/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:72 http://localhost:3142/debian sid/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:73 http://localhost:3142/debian sid/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:74 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:75 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:76 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:77 http://localhost:3142/debian sid/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:78 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:79 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:80 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:81 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:82 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:83 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-2 [31.4 kB] Get:84 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:85 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:86 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:88 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:89 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.94-1+b2 [339 kB] Get:90 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:91 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:94 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.77-1 [183 kB] Get:95 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:96 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:97 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:98 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:99 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:100 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:101 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:102 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:103 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.15~pre1-1 [38.5 kB] Get:104 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-3 [54.4 kB] Get:105 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2+b1 [35.6 kB] Get:106 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:107 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:109 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:111 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:112 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB] Get:113 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:115 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1+b3 [12.5 kB] Get:116 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:117 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB] Get:119 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:120 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB] Get:121 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB] Get:123 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB] Get:124 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:125 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.46-1+b1 [64.9 kB] Get:126 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB] Get:127 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:128 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B] Get:129 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b3 [13.0 kB] Get:130 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB] Get:131 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:132 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB] Get:133 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2+b3 [20.4 kB] Get:134 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:135 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:136 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:137 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:138 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b1 [314 kB] Get:139 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.902.0+ds-2+b1 [35.5 kB] Get:140 http://localhost:3142/debian sid/main amd64 plzip amd64 1.11-2 [63.6 kB] Get:141 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:142 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:143 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:144 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:145 http://localhost:3142/debian sid/main amd64 lintian all 2.119.0 [1056 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.8 MB in 0s (85.7 MB/s) Selecting previously unselected package netbase. (Reading database ... 42220 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package ucf. Preparing to unpack .../004-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../005-shared-mime-info_2.4-5+b1_amd64.deb ... Unpacking shared-mime-info (2.4-5+b1) ... 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Setting up libberkeleydb-perl:amd64 (0.64-2+b4) ... Setting up plzip (1.11-2) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2+b3) ... Setting up libmouse-perl:amd64 (2.5.11-1+b1) ... Setting up libdata-messagepack-perl (1.02-1+b4) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.5-1+b1) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libcpanel-json-xs-perl:amd64 (4.38-1+b1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libxmlb2:amd64 (0.3.20-1) ... Setting up libdevel-size-perl (0.84-1+b1) ... Setting up unzip (6.0-28) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.902.0+ds-2+b1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up liblzo2-2:amd64 (2.10-3) ... Setting up libtime-moment-perl (0.44-2+b4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b3) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004008-1) ... 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Setting up openssl (3.3.2-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b4) ... Setting up libperlio-gzip-perl (0.20-1+b4) ... Setting up readline-common (8.2-5) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b3) ... Setting up libmarkdown2:amd64 (2.2.7-2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up iso-codes (4.17.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b4) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libcurl3t64-gnutls:amd64 (8.10.1-2) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b3) ... Setting up libappstream5:amd64 (1.0.3-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.46-1+b1) ... Setting up appstream (1.0.3-1) ... ✔ Metadata cache was updated successfully. Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up gpgconf (2.2.44-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.2.44-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.11-2) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.119.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 3246844 Build-Time: 1832 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 21 Job: gatb-core_1.4.2+dfsg-13 Lintian: pass Machine Architecture: amd64 Package: gatb-core Package-Time: 1862 Source-Version: 1.4.2+dfsg-13 Space: 3246844 Status: successful Version: 1.4.2+dfsg-13 -------------------------------------------------------------------------------- Finished at 2024-10-16T01:43:10Z Build needed 00:31:02, 3246844k disk space