sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | glam2 1064-8 (armhf) Fri, 28 Jun 2019 23:09:35 +0000 | +==============================================================================+ Package: glam2 Version: 1064-8 Source Version: 1064-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-527404fe-5b1d-4645-adac-498b25365981' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [214 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-28-0814.36.pdiff [1331 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-28-1433.24.pdiff [4930 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-28-2013.43.pdiff [3772 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-28-2013.43.pdiff [3772 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-06-28-1433.24.pdiff [6583 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-06-28-2013.43.pdiff [12.8 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-06-28-2013.43.pdiff [12.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8078 kB] Fetched 8377 kB in 2s (4452 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'glam2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/glam2.git Please use: git clone https://salsa.debian.org/med-team/glam2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 252 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main glam2 1064-8 (dsc) [1997 B] Get:2 http://debian.oregonstate.edu/debian unstable/main glam2 1064-8 (tar) [238 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main glam2 1064-8 (diff) [12.2 kB] Fetched 252 kB in 0s (24.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/glam2-bilKiT/glam2-1064' with '<>' I: NOTICE: Log filtering will replace 'build/glam2-bilKiT' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-SgdjzY/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-SgdjzY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-SgdjzY/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-SgdjzY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-SgdjzY/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-SgdjzY/apt_archive ./ Packages [450 B] Fetched 1770 B in 0s (90.1 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabihf gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sbuild-build-depends-core-dummy:armhf sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 152 MB of additional disk space will be used. Get:1 copy:/<>/resolver-SgdjzY/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.31.1-16 [2834 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf-base amd64 8.3.0-7cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabihf amd64 8.3.0-7cross1 [6545 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.28-10cross2 [1172 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:8.3.0-7cross1 [37.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 8.3.0-7cross1 [63.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 8.3.0-7cross1 [6564 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 8.3.0-7cross1 [301 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 8.3.0-7cross1 [329 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 8.3.0-7cross1 [103 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armhf-cross all 8.3.0-7cross1 [612 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf amd64 8.3.0-7cross1 [6973 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:8.3.0-1 [1456 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 4.19.28-2cross2 [1228 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.28-10cross2 [2149 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armhf-cross all 8.3.0-7cross1 [1556 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabihf amd64 8.3.0-7cross1 [7126 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:8.3.0-1 [1180 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.6 [6572 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (59.5 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11954 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Unpacking crossbuild-essential-armhf (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:armhf. Preparing to unpack .../43-sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libc6-armhf-cross (2.28-10cross2) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-7cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libatomic1-armhf-cross (8.3.0-7cross1) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-3) ... Setting up libgcc1-armhf-cross (1:8.3.0-7cross1) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.3.0-7cross1) ... Setting up linux-libc-dev-armhf-cross (4.19.28-2cross2) ... Setting up sensible-utils (0.0.12) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-16) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up cpp-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up libgomp1-armhf-cross (8.3.0-7cross1) ... Setting up libc6-dev-armhf-cross (2.28-10cross2) ... Setting up libstdc++6-armhf-cross (8.3.0-7cross1) ... Setting up libubsan1-armhf-cross (8.3.0-7cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up cpp-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armhf-cross (8.3.0-7cross1) ... Setting up libgcc-8-dev-armhf-cross (8.3.0-7cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-armhf-cross (8.3.0-7cross1) ... Setting up gcc-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up g++-8-arm-linux-gnueabihf (8.3.0-7cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-arm-linux-gnueabihf (4:8.3.0-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armhf (12.6) ... Setting up sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-SgdjzY/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-SgdjzY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-SgdjzY/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-SgdjzY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-SgdjzY/apt_archive ./ Sources [485 B] Get:5 copy:/<>/resolver-SgdjzY/apt_archive ./ Packages [569 B] Fetched 2017 B in 0s (109 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armhf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-SgdjzY/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armhf. (Reading database ... 15003 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), libfftw3-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), libfftw3-dev dpkg-deb: building package 'sbuild-build-depends-glam2-dummy' in '/<>/resolver-SgdjzY/apt_archive/sbuild-build-depends-glam2-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-glam2-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-SgdjzY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-SgdjzY/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-SgdjzY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-SgdjzY/apt_archive ./ Sources [641 B] Get:5 copy:/<>/resolver-SgdjzY/apt_archive ./ Packages [721 B] Fetched 2325 B in 0s (128 kB/s) Reading package lists... Reading package lists... Install glam2 build dependencies (apt-based resolver) ----------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfftw3-bin libfftw3-dev:armhf libfftw3-double3 libfftw3-double3:armhf libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfftw3-single3:armhf libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libfftw3-doc:armhf libfftw3-dev libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfftw3-bin libfftw3-dev:armhf libfftw3-double3 libfftw3-double3:armhf libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfftw3-single3:armhf libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 linux-libc-dev:armhf m4 man-db po-debconf sbuild-build-depends-glam2-dummy:armhf 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 23.3 MB of archives. After this operation, 93.2 MB of additional disk space will be used. Get:1 copy:/<>/resolver-SgdjzY/apt_archive ./ sbuild-build-depends-glam2-dummy 0.invalid.0 [884 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-2 [1259 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main armhf gcc-8-base armhf 8.3.0-7 [191 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:8.3.0-7 [37.1 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.28-10 [2390 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 8.3.0-7 [339 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 8.3.0-7 [336 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 8.3.0-7 [6740 B] Get:35 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 4.19.37-5 [1168 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.28-10 [2149 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libfftw3-double3 amd64 3.3.8-2 [733 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfftw3-long3 amd64 3.3.8-2 [319 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.8-2 [558 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfftw3-single3 amd64 3.3.8-2 [762 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfftw3-bin amd64 3.3.8-2 [50.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 8.3.0-7 [64.8 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main armhf libfftw3-double3 armhf 3.3.8-2 [432 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main armhf libfftw3-single3 armhf 3.3.8-2 [715 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main armhf libfftw3-dev armhf 3.3.8-2 [1141 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 8.3.0-7 [103 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-8-dev armhf 8.3.0-7 [611 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-8-dev armhf 8.3.0-7 [1585 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 23.3 MB in 0s (56.2 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15003 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../21-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../22-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../23-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../25-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../26-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:armhf. Preparing to unpack .../27-gcc-8-base_8.3.0-7_armhf.deb ... Unpacking gcc-8-base:armhf (8.3.0-7) ... Selecting previously unselected package libgcc1:armhf. Preparing to unpack .../28-libgcc1_1%3a8.3.0-7_armhf.deb ... Unpacking libgcc1:armhf (1:8.3.0-7) ... Selecting previously unselected package libc6:armhf. Preparing to unpack .../29-libc6_2.28-10_armhf.deb ... Unpacking libc6:armhf (2.28-10) ... Selecting previously unselected package libstdc++6:armhf. Preparing to unpack .../30-libstdc++6_8.3.0-7_armhf.deb ... Unpacking libstdc++6:armhf (8.3.0-7) ... Selecting previously unselected package libasan5:armhf. Preparing to unpack .../31-libasan5_8.3.0-7_armhf.deb ... Unpacking libasan5:armhf (8.3.0-7) ... Selecting previously unselected package libatomic1:armhf. Preparing to unpack .../32-libatomic1_8.3.0-7_armhf.deb ... Unpacking libatomic1:armhf (8.3.0-7) ... Selecting previously unselected package linux-libc-dev:armhf. Preparing to unpack .../33-linux-libc-dev_4.19.37-5_armhf.deb ... Unpacking linux-libc-dev:armhf (4.19.37-5) ... Selecting previously unselected package libc6-dev:armhf. Preparing to unpack .../34-libc6-dev_2.28-10_armhf.deb ... Unpacking libc6-dev:armhf (2.28-10) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../35-libfftw3-double3_3.3.8-2_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../36-libfftw3-long3_3.3.8-2_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../37-libfftw3-quad3_3.3.8-2_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../38-libfftw3-single3_3.3.8-2_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.8-2) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../39-libfftw3-bin_3.3.8-2_amd64.deb ... Unpacking libfftw3-bin (3.3.8-2) ... Selecting previously unselected package libgomp1:armhf. Preparing to unpack .../40-libgomp1_8.3.0-7_armhf.deb ... Unpacking libgomp1:armhf (8.3.0-7) ... Selecting previously unselected package libfftw3-double3:armhf. Preparing to unpack .../41-libfftw3-double3_3.3.8-2_armhf.deb ... Unpacking libfftw3-double3:armhf (3.3.8-2) ... Selecting previously unselected package libfftw3-single3:armhf. Preparing to unpack .../42-libfftw3-single3_3.3.8-2_armhf.deb ... Unpacking libfftw3-single3:armhf (3.3.8-2) ... Selecting previously unselected package libfftw3-dev:armhf. Preparing to unpack .../43-libfftw3-dev_3.3.8-2_armhf.deb ... Unpacking libfftw3-dev:armhf (3.3.8-2) ... Selecting previously unselected package libubsan1:armhf. Preparing to unpack .../44-libubsan1_8.3.0-7_armhf.deb ... Unpacking libubsan1:armhf (8.3.0-7) ... Selecting previously unselected package libgcc-8-dev:armhf. Preparing to unpack .../45-libgcc-8-dev_8.3.0-7_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.3.0-7) ... Selecting previously unselected package libstdc++-8-dev:armhf. Preparing to unpack .../46-libstdc++-8-dev_8.3.0-7_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.3.0-7) ... Selecting previously unselected package sbuild-build-depends-glam2-dummy:armhf. Preparing to unpack .../47-sbuild-build-depends-glam2-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-glam2-dummy:armhf (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfftw3-single3:amd64 (3.3.8-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-2) ... No schema files found: doing nothing. Setting up linux-libc-dev:armhf (4.19.37-5) ... Setting up libfftw3-long3:amd64 (3.3.8-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libfftw3-quad3:amd64 (3.3.8-2) ... Setting up gcc-8-base:armhf (8.3.0-7) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libfftw3-double3:amd64 (3.3.8-2) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up libfftw3-bin (3.3.8-2) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:armhf (2.28-10) ... Setting up libc6-dev:armhf (2.28-10) ... Setting up libgcc1:armhf (1:8.3.0-7) ... Setting up libgomp1:armhf (8.3.0-7) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:armhf (8.3.0-7) ... Setting up libfftw3-double3:armhf (3.3.8-2) ... Setting up libstdc++6:armhf (8.3.0-7) ... Setting up libfftw3-single3:armhf (3.3.8-2) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armhf (8.3.0-7) ... Setting up libubsan1:armhf (8.3.0-7) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libfftw3-dev:armhf (3.3.8-2) ... Setting up libgcc-8-dev:armhf (8.3.0-7) ... Setting up libstdc++-8-dev:armhf (8.3.0-7) ... Setting up sbuild-build-depends-glam2-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.7 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-armhf-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-armhf-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-5 Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-arm-linux-gnueabihf_2.31.1-16 binutils-common_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9.1 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-arm-linux-gnueabihf_8.3.0-7cross1 cpp-arm-linux-gnueabihf_4:8.3.0-1 cross-config_2.6.15-3 crossbuild-essential-armhf_12.6 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.12-3 e2fsprogs_1.45.2-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-arm-linux-gnueabihf_8.3.0-7cross1 g++-arm-linux-gnueabihf_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-arm-linux-gnueabihf_8.3.0-7cross1 gcc-8-arm-linux-gnueabihf-base_8.3.0-7cross1 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-arm-linux-gnueabihf_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.2 libarchive-zip-perl_1.64-1 libasan5_8.3.0-7 libasan5-armhf-cross_8.3.0-7cross1 libatomic1_8.3.0-7 libatomic1-armhf-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9.1 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-armhf-cross_2.28-10cross2 libc6-dev_2.28-10 libc6-dev-armhf-cross_2.28-10cross2 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.2-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.2-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfftw3-bin_3.3.8-2 libfftw3-dev_3.3.8-2 libfftw3-double3_3.3.8-2 libfftw3-long3_3.3.8-2 libfftw3-quad3_3.3.8-2 libfftw3-single3_3.3.8-2 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-7 libgcc-8-dev-armhf-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-armhf-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-2 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-4 libgomp1_8.3.0-7 libgomp1-armhf-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.2-2 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libquadmath0_8.3.0-7 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.2-1 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-armhf-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-armhf-cross_8.3.0-7cross1 libsystemd0_241-5 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libubsan1_8.3.0-7 libubsan1-armhf-cross_8.3.0-7cross1 libuchardet0_0.0.6-3 libudev1_241-5 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-5 linux-libc-dev-armhf-cross_4.19.28-2cross2 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-glam2-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Jun 27 12:39:40 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./glam2_1064-8.dsc dpkg-source: info: extracting glam2 in /<> dpkg-source: info: unpacking glam2_1064.orig.tar.gz dpkg-source: info: unpacking glam2_1064-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying change-fixed-compilers.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-527404fe-5b1d-4645-adac-498b25365981 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package glam2 dpkg-buildpackage: info: source version 1064-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nguyen Hoang Tung dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src dh_autoreconf_clean -O--sourcedirectory=src debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f purge/*.o purge/purge src/*.o src/glam2 src/glam2mask scr/glam2format src/glam2scan src/glam2fft src/glam2format make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[2]: Entering directory '/<>/src' arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2 alphabet.c args.c column_sample.c dirichlet.c dna_prior.c fasta.c glam2.c glam2_aln.c init.c output.c recode3_20comp.c site_sample.c util.c -lm -Wl,-z,relro -Wl,-z,now arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2scan alphabet.c scan_args.c dirichlet.c dna_prior.c fasta.c scan.c scan_init.c scan_output.c recode3_20comp.c util.c heap.c motif.c alignment.c -lm -Wl,-z,relro -Wl,-z,now arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2format glam2format.c alignment.c fasta.c util.c -lm -Wl,-z,relro -Wl,-z,now arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o glam2mask glam2mask.c alignment.c fasta.c util.c -lm -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/<>/src' dh_auto_build -B src -- glam2fft cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc glam2fft make[2]: Entering directory '/<>/src' arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -DFFT -o glam2fft alphabet.c args.c column_sample.c dirichlet.c dna_prior.c fasta.c glam2.c glam2_aln.c init.c output.c recode3_20comp.c site_sample.c util.c convolve.c -lm -lfftw3 -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/<>/src' dh_auto_build -B purge cd purge && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[2]: Entering directory '/<>/purge' arm-linux-gnueabihf-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -o purge *.c -lm -Wl,-z,relro -Wl,-z,now block.c: In function 'IntersectBlockL': block.c:314:18: warning: operation on '*(B2->b + (sizetype)e)' may be undefined [-Wsequence-point] if((B2->b[e] = B1->b[e]) & B2->b[e]) {B2->list[k++]=e; } ~~~~~~~~~~^~~~~~~~~~~ gblast.c: In function 'MakeGBlast': gblast.c:110:2: warning: this 'for' clause does not guard... [-Wmisleading-indentation] for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best); ^~~ gblast.c:110:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best); ^~~~ gblast.c:14:14: warning: variable 'time1' set but not used [-Wunused-but-set-variable] long time1; ^~~~~ gblast.c:11:9: warning: variable 'R' set but not used [-Wunused-but-set-variable] int **R; ^ sequence.c: In function 'RandomizeSeq': sequence.c:235:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if(E->info!=NULL)free(E->info); E->info = NULL; return E; ^~ sequence.c:235:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if(E->info!=NULL)free(E->info); E->info = NULL; return E; ^ sequence.c: In function 'ShuffleSeq': sequence.c:290:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if(E->info!=NULL)free(E->info); E->info = NULL; ^~ sequence.c:290:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if(E->info!=NULL)free(E->info); E->info = NULL; ^ sequence.c: In function 'ShuffleSeq2': sequence.c:309:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if(E->info!=NULL)free(E->info); E->info = NULL; ^~ sequence.c:309:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if(E->info!=NULL)free(E->info); E->info = NULL; ^ sequence.c: In function 'CenterSeqHSP': sequence.c:429:17: warning: variable 'score' set but not used [-Wunused-but-set-variable] long v,n,n1,n2,score=0,e,start,end; ^~~~~ make[2]: Leaving directory '/<>/purge' make[1]: Leaving directory '/<>' dh_auto_test -a -O--sourcedirectory=src create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src dh_auto_install -a -O--sourcedirectory=src debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # purge is renamed glam2-purge to avoid namespace problems. mv /<>/debian/glam2/usr/bin/purge /<>/debian/glam2/usr/bin/glam2-purge # FFT is enabled by default in Debian. mv /<>/debian/glam2/usr/bin/glam2fft /<>/debian/glam2/usr/bin/glam2 make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=src dh_installchangelogs -a -O--sourcedirectory=src dh_installexamples -a -O--sourcedirectory=src dh_installman -a -O--sourcedirectory=src dh_installinit -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src debian/rules override_dh_compress make[1]: Entering directory '/<>' dh_compress --exclude=.pdf make[1]: Leaving directory '/<>' dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src dpkg-deb: building package 'glam2' in '../glam2_1064-8_armhf.deb'. dpkg-deb: building package 'glam2-dbgsym' in '../glam2-dbgsym_1064-8_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../glam2_1064-8_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-06-28T23:10:39Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-SgdjzY/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-glam2-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-SgdjzY/apt_archive ./ InRelease Get:2 copy:/<>/resolver-SgdjzY/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-SgdjzY/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-SgdjzY/apt_archive ./ Sources [761 B] Get:5 copy:/<>/resolver-SgdjzY/apt_archive ./ Packages [834 B] Fetched 2558 B in 0s (127 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7774 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-SgdjzY/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-3 [641 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1c-1 [1535 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.15.0 [1181 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7774 kB in 0s (37.8 MB/s) Selecting previously unselected package netbase. (Reading database ... 17817 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-2_amd64.deb ... Unpacking gpgconf (2.2.13-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-3) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.13-2_amd64.deb ... Unpacking gpg (2.2.13-2) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../12-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../13-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../14-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../15-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../16-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../18-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../19-libssl1.1_1.1.1c-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1c-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../20-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../21-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../22-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../23-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../24-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../26-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../29-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../30-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../31-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../32-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../33-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../34-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../35-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../36-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../37-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../38-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../39-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../40-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../41-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../42-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../43-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../44-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../45-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../46-lintian_2.15.0_all.deb ... Unpacking lintian (2.15.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../47-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libssl1.1:amd64 (1.1.1c-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-3) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (7.0-5) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.13-2) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.13-2) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.15.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ glam2_1064-8_armhf.changes: --------------------------- Format: 1.8 Date: Thu, 27 Jun 2019 14:32:02 +0200 Source: glam2 Binary: glam2 glam2-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1064-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nguyen Hoang Tung Description: glam2 - gapped protein motifs from unaligned sequences Closes: 931154 Changes: glam2 (1064-8) unstable; urgency=medium . * Team upload. * Build for the right architecture Closes: 931154 Checksums-Sha1: 50497810cd10dcb2645db99d9527092ac06d6623 273056 glam2-dbgsym_1064-8_armhf.deb 314684de4f4b3f4f619d1fdfe089cd1ea0adde02 4561 glam2_1064-8_armhf.buildinfo 136b89201c988dfd10bb7cbc1368a1ab31a3d3c1 219924 glam2_1064-8_armhf.deb Checksums-Sha256: 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50497810cd10dcb2645db99d9527092ac06d6623 273056 glam2-dbgsym_1064-8_armhf.deb 136b89201c988dfd10bb7cbc1368a1ab31a3d3c1 219924 glam2_1064-8_armhf.deb Checksums-Sha256: 1797115da5fa5e5f1c1c7417d5c1d567209ac6641a3554b35c64e73f126d9108 273056 glam2-dbgsym_1064-8_armhf.deb 8f2e3fb0c2d221ea7cb50bcb69d39007653f95a954ccf208867ab142940e7b25 219924 glam2_1064-8_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 28 Jun 2019 23:10:39 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9.1), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-7), dash (= 0.5.10.2-5), debconf (= 1.5.72), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-7), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-7), gcc-8-base (= 8.3.0-7), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-7), libatomic1 (= 8.3.0-7), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-3), libaudit1 (= 1:2.8.4-3), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9.1), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-7), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfftw3-bin (= 3.3.8-2), libfftw3-dev (= 3.3.8-2), libfftw3-double3 (= 3.3.8-2), libfftw3-long3 (= 3.3.8-2), libfftw3-quad3 (= 3.3.8-2), libfftw3-single3 (= 3.3.8-2), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-7), libgcc1 (= 1:8.3.0-7), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-2), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.3.0-7), libgpg-error0 (= 1.35-1), libicu63 (= 63.2-2), libisl19 (= 0.20-2), libitm1 (= 8.3.0-7), liblsan0 (= 8.3.0-7), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-7), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-7), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-7), libstdc++6 (= 8.3.0-7), libsystemd0 (= 241-5), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-7), libubsan1 (= 8.3.0-7), libuchardet0 (= 0.0.6-3), libudev1 (= 241-5), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.37-5), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1561638722" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ glam2-dbgsym_1064-8_armhf.deb ----------------------------- new Debian package, version 2.0. size 273056 bytes: control archive=756 bytes. 524 bytes, 12 lines control 530 bytes, 5 lines md5sums Package: glam2-dbgsym Source: glam2 Version: 1064-8 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 340 Depends: glam2 (= 1064-8) Section: debug Priority: optional Description: debug symbols for glam2 Build-Ids: 0cb5fb14bb19927b12cab5b3ecde45ddfb4f76dc 1131f779d237ac74f9b2fe17cbcbaae533c8b5a0 cbb778a0d549e895341887afa833f09190b5c3c9 e204b97161185b8b3ede37a3ab1ac2bc0e9b2206 fc56f88d987e59f53ff0d98efb2f3146c0066981 drwxr-xr-x root/root 0 2019-06-27 12:32 ./ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/0c/ -rw-r--r-- root/root 35660 2019-06-27 12:32 ./usr/lib/debug/.build-id/0c/b5fb14bb19927b12cab5b3ecde45ddfb4f76dc.debug drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/11/ -rw-r--r-- root/root 67368 2019-06-27 12:32 ./usr/lib/debug/.build-id/11/31f779d237ac74f9b2fe17cbcbaae533c8b5a0.debug drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/cb/ -rw-r--r-- root/root 97416 2019-06-27 12:32 ./usr/lib/debug/.build-id/cb/b778a0d549e895341887afa833f09190b5c3c9.debug drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/e2/ -rw-r--r-- root/root 42276 2019-06-27 12:32 ./usr/lib/debug/.build-id/e2/04b97161185b8b3ede37a3ab1ac2bc0e9b2206.debug drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/lib/debug/.build-id/fc/ -rw-r--r-- root/root 88436 2019-06-27 12:32 ./usr/lib/debug/.build-id/fc/56f88d987e59f53ff0d98efb2f3146c0066981.debug drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-06-27 12:32 ./usr/share/doc/glam2-dbgsym -> glam2 glam2_1064-8_armhf.deb ---------------------- new Debian package, version 2.0. size 219924 bytes: control archive=2004 bytes. 1565 bytes, 32 lines control 2470 bytes, 37 lines md5sums Package: glam2 Version: 1064-8 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 397 Depends: libc6 (>= 2.7), libfftw3-double3 (>= 3.3.5) Section: science Priority: optional Homepage: http://acb.qfab.org/acb/glam2/ Description: gapped protein motifs from unaligned sequences GLAM2 is a software package for finding motifs in sequences, typically amino-acid or nucleotide sequences. A motif is a re-occurring sequence pattern: typical examples are the TATA box and the CAAX prenylation motif. The main innovation of GLAM2 is that it allows insertions and deletions in motifs. . This package includes programs for discovering motifs shared by a set of sequences and finding matches to these motifs in a sequence database, as well as utilities for converting glam2 motifs to standard alignment formats, masking glam2 motifs out of sequences so that weaker motifs can be found, and removing highly similar members of a set of sequences. . The package includes these programs: glam2: discovering motifs shared by a set of sequences; glam2scan: finding matches, in a sequence database, to a motif discovered by glam2; glam2format: converting glam2 motifs to standard alignment formats; glam2mask: masking glam2 motifs out of sequences, so that weaker motifs can be found; glam2-purge: removing highly similar members of a set of sequences. . In this binary package, the fast Fourier algorithm (FFT) was enabled for the glam2 program. drwxr-xr-x root/root 0 2019-06-27 12:32 ./ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/bin/ -rwxr-xr-x root/root 50600 2019-06-27 12:32 ./usr/bin/glam2 -rwxr-xr-x root/root 42544 2019-06-27 12:32 ./usr/bin/glam2-purge -rwxr-xr-x root/root 21928 2019-06-27 12:32 ./usr/bin/glam2format -rwxr-xr-x root/root 17832 2019-06-27 12:32 ./usr/bin/glam2mask -rwxr-xr-x root/root 34216 2019-06-27 12:32 ./usr/bin/glam2scan drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/doc-base/ -rw-r--r-- root/root 462 2019-06-27 12:32 ./usr/share/doc-base/glam2-manual -rw-r--r-- root/root 231 2019-06-27 12:32 ./usr/share/doc-base/glam2-method drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/doc/glam2/ -rw-r--r-- root/root 144918 2007-11-26 08:15 ./usr/share/doc/glam2/GLAM2_method.pdf -rw-r--r-- root/root 79 2007-08-23 09:34 ./usr/share/doc/glam2/README -rw-r--r-- root/root 287 2019-06-27 12:32 ./usr/share/doc/glam2/README.Debian -rw-r--r-- root/root 278 2019-06-27 12:32 ./usr/share/doc/glam2/README.test -rw-r--r-- root/root 3222 2007-08-23 11:19 ./usr/share/doc/glam2/alphabet.html -rw-r--r-- root/root 1448 2019-06-27 12:32 ./usr/share/doc/glam2/changelog.Debian.gz -rw-r--r-- root/root 344 2008-05-19 01:28 ./usr/share/doc/glam2/changelog.gz -rw-r--r-- root/root 3232 2019-06-27 12:32 ./usr/share/doc/glam2/copyright -rw-r--r-- root/root 1639 2007-08-23 09:08 ./usr/share/doc/glam2/dirichlet.html drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/doc/glam2/examples/ -rw-r--r-- root/root 2106 2007-06-13 05:01 ./usr/share/doc/glam2/examples/crp0.s -rw-r--r-- root/root 61 2007-04-12 02:03 ./usr/share/doc/glam2/examples/dna.alph -rw-r--r-- root/root 359 2007-04-12 02:03 ./usr/share/doc/glam2/examples/glam_tfbs.1comp -rw-r--r-- root/root 977 2007-06-13 05:01 ./usr/share/doc/glam2/examples/lipocalin.s -rw-r--r-- root/root 2810 2007-04-12 02:03 ./usr/share/doc/glam2/examples/recode3.20comp.gz -rw-r--r-- root/root 369 2007-04-12 02:03 ./usr/share/doc/glam2/examples/robinson.alph -rw-r--r-- root/root 93 2007-08-07 08:29 ./usr/share/doc/glam2/glam2.css -rw-r--r-- root/root 5645 2007-08-23 11:27 ./usr/share/doc/glam2/glam2_ref.html -rw-r--r-- root/root 13483 2008-05-09 16:05 ./usr/share/doc/glam2/glam2_tut.html -rw-r--r-- root/root 2134 2007-08-23 09:08 ./usr/share/doc/glam2/glam2format.html -rw-r--r-- root/root 1164 2007-08-23 09:08 ./usr/share/doc/glam2/glam2mask.html -rw-r--r-- root/root 3892 2007-08-23 09:10 ./usr/share/doc/glam2/glam2scan.html -rw-r--r-- root/root 3705 2008-01-21 02:45 ./usr/share/doc/glam2/index.html -rw-r--r-- root/root 2556 2008-05-19 01:21 ./usr/share/doc/glam2/install.html -rw-r--r-- root/root 2690 2007-11-08 02:14 ./usr/share/doc/glam2/purge.html -rw-r--r-- root/root 334 2019-06-27 12:32 ./usr/share/doc/glam2/run-unit-test drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/man/ drwxr-xr-x root/root 0 2019-06-27 12:32 ./usr/share/man/man1/ -rw-r--r-- root/root 1418 2019-06-27 12:32 ./usr/share/man/man1/glam2-purge.1.gz -rw-r--r-- root/root 1502 2019-06-27 12:32 ./usr/share/man/man1/glam2.1.gz -rw-r--r-- root/root 1366 2019-06-27 12:32 ./usr/share/man/man1/glam2format.1.gz -rw-r--r-- root/root 1011 2019-06-27 12:32 ./usr/share/man/man1/glam2mask.1.gz -rw-r--r-- root/root 1124 2019-06-27 12:32 ./usr/share/man/man1/glam2scan.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 3396 Build-Time: 28 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 25 Job: glam2_1064-8 Lintian: pass Machine Architecture: amd64 Package: glam2 Package-Time: 64 Source-Version: 1064-8 Space: 3396 Status: successful Version: 1064-8 -------------------------------------------------------------------------------- Finished at 2019-06-28T23:10:39Z Build needed 00:01:04, 3396k disk space