sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | gmap 2025-07-31+ds-1 (ppc64el) Fri, 17 Oct 2025 01:50:09 +0000 | +==============================================================================+ Package: gmap Version: 2025-07-31+ds-1 Source Version: 2025-07-31+ds-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-a6060d45-a3a8-4d74-b529-5cb9f459e05e' with '<>' I: NOTICE: Log filtering will replace 'build/gmap-rlEAxU/resolver-Lq1UN7' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian unstable InRelease Get:2 http://localhost:3142/debian unstable/main ppc64el Packages [10.0 MB] Fetched 10.0 MB in 1s (10.3 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'gmap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gmap.git Please use: git clone https://salsa.debian.org/med-team/gmap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2581 kB of source archives. Get:1 http://localhost:3142/debian unstable/main gmap 2025-07-31+ds-1 (dsc) [2309 B] Get:2 http://localhost:3142/debian unstable/main gmap 2025-07-31+ds-1 (tar) [2565 kB] Get:3 http://localhost:3142/debian unstable/main gmap 2025-07-31+ds-1 (diff) [13.7 kB] Fetched 2581 kB in 0s (8245 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/gmap-rlEAxU/gmap-2025-07-31+ds' with '<>' I: NOTICE: Log filtering will replace 'build/gmap-rlEAxU' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), architecture-is-little-endian, help2man, libbz2-dev, zlib1g-dev, debhelper, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), architecture-is-little-endian, help2man, libbz2-dev, zlib1g-dev, debhelper, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [810 B] Get:5 copy:/<>/apt_archive ./ Packages [855 B] Fetched 2274 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: architecture-properties:ppc64el autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-15-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-15-base:ppc64el gcc-15-cross-base gcc-15-powerpc64le-linux-gnu gcc-15-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-15-dev:ppc64el libgcc-15-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libitm1:ppc64el libitm1-ppc64el-cross liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsimde-dev libstdc++-15-dev:ppc64el libstdc++-15-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5 libxml2-16 linux-libc-dev-ppc64el-cross m4 man-db po-debconf sensible-utils zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-15-locales cpp-15-doc cpp-doc dh-make gcc-15-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libstdc++-15-doc:ppc64el libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:ppc64el libidn2-0:ppc64el libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: architecture-properties:ppc64el autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-15-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-15-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-15-base:ppc64el gcc-15-cross-base gcc-15-powerpc64le-linux-gnu gcc-15-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbz2-1.0:ppc64el libbz2-dev:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-15-dev:ppc64el libgcc-15-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libitm1:ppc64el libitm1-ppc64el-cross liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsimde-dev libstdc++-15-dev:ppc64el libstdc++-15-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5 libxml2-16 linux-libc-dev-ppc64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 82 newly installed, 0 to remove and 0 not upgraded. Need to get 301 MB of archives. After this operation, 1273 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:6 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:7 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get:9 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:10 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:12 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:13 http://localhost:3142/debian unstable/main ppc64el architecture-properties ppc64el 0.2.6 [2336 B] Get:14 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.20-2 [325 kB] Get:15 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:16 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:17 http://localhost:3142/debian unstable/main amd64 automake all 1:1.18.1-2 [877 kB] Get:18 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:19 http://localhost:3142/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.45-7 [1637 kB] Get:20 http://localhost:3142/debian unstable/main amd64 gcc-15-powerpc64le-linux-gnu-base amd64 15.2.0-4cross1 [53.0 kB] Get:21 http://localhost:3142/debian unstable/main amd64 cpp-15-powerpc64le-linux-gnu amd64 15.2.0-4cross1 [79.0 MB] Get:22 http://localhost:3142/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:15.2.0-4 [5304 B] Get:23 http://localhost:3142/debian unstable/main amd64 gcc-15-cross-base all 15.2.0-4cross1 [48.4 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libc6-ppc64el-cross all 2.41-11cross1 [1428 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 15.2.0-4cross1 [52.4 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libgomp1-ppc64el-cross all 15.2.0-4cross1 [141 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libitm1-ppc64el-cross all 15.2.0-4cross1 [28.5 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libatomic1-ppc64el-cross all 15.2.0-4cross1 [10.1 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libasan8-ppc64el-cross all 15.2.0-4cross1 [2712 kB] Get:30 http://localhost:3142/debian unstable/main amd64 liblsan0-ppc64el-cross all 15.2.0-4cross1 [1253 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libtsan2-ppc64el-cross all 15.2.0-4cross1 [2449 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libstdc++6-ppc64el-cross all 15.2.0-4cross1 [773 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libubsan1-ppc64el-cross all 15.2.0-4cross1 [1177 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libquadmath0-ppc64el-cross all 15.2.0-4cross1 [157 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libgcc-15-dev-ppc64el-cross all 15.2.0-4cross1 [1452 kB] Get:36 http://localhost:3142/debian unstable/main amd64 gcc-15-powerpc64le-linux-gnu amd64 15.2.0-4cross1 [86.8 MB] Get:37 http://localhost:3142/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:15.2.0-4 [1460 B] Get:38 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 6.12.38-1cross1 [2457 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.41-11cross1 [1896 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libstdc++-15-dev-ppc64el-cross all 15.2.0-4cross1 [2545 kB] Get:41 http://localhost:3142/debian unstable/main amd64 g++-15-powerpc64le-linux-gnu amd64 15.2.0-4cross1 [84.4 MB] Get:42 http://localhost:3142/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:15.2.0-4 [1212 B] Get:43 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.12 [3560 B] Get:44 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-5 [540 kB] Get:46 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get:49 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get:50 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get:51 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get:54 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get:55 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:56 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:57 http://localhost:3142/debian unstable/main amd64 debhelper all 13.28 [941 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.2-1 [29.7 kB] Get:59 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.2-1 [76.0 kB] Get:60 http://localhost:3142/debian unstable/main ppc64el gcc-15-base ppc64el 15.2.0-4 [52.8 kB] Get:61 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:62 http://localhost:3142/debian unstable/main ppc64el libgcc-s1 ppc64el 15.2.0-4 [52.5 kB] Get:63 http://localhost:3142/debian unstable/main ppc64el libc6 ppc64el 2.41-12 [2757 kB] Get:64 http://localhost:3142/debian unstable/main ppc64el libasan8 ppc64el 15.2.0-4 [2720 kB] Get:65 http://localhost:3142/debian unstable/main ppc64el libatomic1 ppc64el 15.2.0-4 [10.4 kB] Get:66 http://localhost:3142/debian unstable/main ppc64el libbz2-1.0 ppc64el 1.0.8-6 [42.2 kB] Get:67 http://localhost:3142/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.38-1 [98.0 kB] Get:68 http://localhost:3142/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.38-1 [132 kB] Get:69 http://localhost:3142/debian unstable/main ppc64el libc6-dev ppc64el 2.41-12 [1900 kB] Get:70 http://localhost:3142/debian unstable/main ppc64el libbz2-dev ppc64el 1.0.8-6 [36.2 kB] Get:71 http://localhost:3142/debian unstable/main ppc64el libgomp1 ppc64el 15.2.0-4 [149 kB] Get:72 http://localhost:3142/debian unstable/main ppc64el libitm1 ppc64el 15.2.0-4 [29.0 kB] Get:73 http://localhost:3142/debian unstable/main ppc64el liblsan0 ppc64el 15.2.0-4 [1253 kB] Get:74 http://localhost:3142/debian unstable/main ppc64el libtsan2 ppc64el 15.2.0-4 [2457 kB] Get:75 http://localhost:3142/debian unstable/main ppc64el libstdc++6 ppc64el 15.2.0-4 [824 kB] Get:76 http://localhost:3142/debian unstable/main ppc64el libubsan1 ppc64el 15.2.0-4 [1178 kB] Get:77 http://localhost:3142/debian unstable/main ppc64el libquadmath0 ppc64el 15.2.0-4 [156 kB] Get:78 http://localhost:3142/debian unstable/main ppc64el libgcc-15-dev ppc64el 15.2.0-4 [1465 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libsimde-dev all 0.8.2-3 [467 kB] Get:80 http://localhost:3142/debian unstable/main ppc64el libstdc++-15-dev ppc64el 15.2.0-4 [2544 kB] Get:81 http://localhost:3142/debian unstable/main ppc64el zlib1g ppc64el 1:1.3.dfsg+really1.3.1-1+b1 [87.4 kB] Get:82 http://localhost:3142/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1+b1 [919 kB] Preconfiguring packages ... Fetched 301 MB in 1s (217 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12899 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. 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Setting up libsimde-dev (0.8.2-3) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up architecture-properties:ppc64el (0.2.6) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libc6-ppc64el-cross (2.41-11cross1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libfakeroot:amd64 (1.37.1.2-1) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up gcc-15-powerpc64le-linux-gnu-base:amd64 (15.2.0-4cross1) ... Setting up fakeroot (1.37.1.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up cpp-15-powerpc64le-linux-gnu (15.2.0-4cross1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up linux-libc-dev-ppc64el-cross (6.12.38-1cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.45-7) ... Setting up gcc-15-cross-base (15.2.0-4cross1) ... Setting up gcc-15-base:ppc64el (15.2.0-4) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up cpp-powerpc64le-linux-gnu (4:15.2.0-4) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libc6-dev-ppc64el-cross (2.41-11cross1) ... Setting up libtool (2.5.4-5) ... Setting up libquadmath0-ppc64el-cross (15.2.0-4cross1) ... Setting up libgomp1-ppc64el-cross (15.2.0-4cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (21) ... Setting up libitm1-ppc64el-cross (15.2.0-4cross1) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libatomic1-ppc64el-cross (15.2.0-4cross1) ... Setting up groff-base (1.23.0-9) ... Setting up libgcc-s1-ppc64el-cross (15.2.0-4cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libasan8-ppc64el-cross (15.2.0-4cross1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up liblsan0-ppc64el-cross (15.2.0-4cross1) ... Setting up libtsan2-ppc64el-cross (15.2.0-4cross1) ... Setting up libstdc++6-ppc64el-cross (15.2.0-4cross1) ... Setting up libubsan1-ppc64el-cross (15.2.0-4cross1) ... Setting up debhelper (13.28) ... Setting up libgcc-15-dev-ppc64el-cross (15.2.0-4cross1) ... Setting up libstdc++-15-dev-ppc64el-cross (15.2.0-4cross1) ... Setting up gcc-15-powerpc64le-linux-gnu (15.2.0-4cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:15.2.0-4) ... Setting up g++-15-powerpc64le-linux-gnu (15.2.0-4cross1) ... Setting up g++-powerpc64le-linux-gnu (4:15.2.0-4) ... Setting up crossbuild-essential-ppc64el (12.12) ... Setting up libgcc-s1:ppc64el (15.2.0-4) ... Setting up libc6:ppc64el (2.41-12) ... Setting up libasan8:ppc64el (15.2.0-4) ... Setting up libtsan2:ppc64el (15.2.0-4) ... Setting up libbz2-1.0:ppc64el (1.0.8-6) ... Setting up libstdc++6:ppc64el (15.2.0-4) ... Setting up liblsan0:ppc64el (15.2.0-4) ... Setting up libitm1:ppc64el (15.2.0-4) ... Setting up zlib1g:ppc64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:ppc64el (1:4.4.38-1) ... Setting up libgomp1:ppc64el (15.2.0-4) ... Setting up libquadmath0:ppc64el (15.2.0-4) ... Setting up libatomic1:ppc64el (15.2.0-4) ... Setting up libubsan1:ppc64el (15.2.0-4) ... Setting up libcrypt-dev:ppc64el (1:4.4.38-1) ... Setting up libc6-dev:ppc64el (2.41-12) ... Setting up libbz2-dev:ppc64el (1.0.8-6) ... Setting up libgcc-15-dev:ppc64el (15.2.0-4) ... Setting up libstdc++-15-dev:ppc64el (15.2.0-4) ... Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.41-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.45-7 dpkg-dev_1.22.21 g++-15_15.2.0-4 gcc-15_15.2.0-4 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-4 libstdc++-15-dev-ppc64el-cross_15.2.0-4cross1 libstdc++6_15.2.0-4 libstdc++6-ppc64el-cross_15.2.0-4cross1 linux-libc-dev_6.16.12-2 Package versions: apt_3.1.8 apt-utils_3.1.8 architecture-properties_0.2.6 autoconf_2.72-3.1 automake_1:1.18.1-2 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 binutils_2.45-7 binutils-common_2.45-7 binutils-powerpc64le-linux-gnu_2.45-7 binutils-x86-64-linux-gnu_2.45-7 bsdextrautils_2.41.2-4 bsdutils_1:2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-4 cpp-15-powerpc64le-linux-gnu_15.2.0-4cross1 cpp-15-x86-64-linux-gnu_15.2.0-4 cpp-powerpc64le-linux-gnu_4:15.2.0-4 cpp-x86-64-linux-gnu_4:15.2.0-4 crossbuild-essential-ppc64el_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_21 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 fakeroot_1.37.1.2-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-4 g++-15-powerpc64le-linux-gnu_15.2.0-4cross1 g++-15-x86-64-linux-gnu_15.2.0-4 g++-powerpc64le-linux-gnu_4:15.2.0-4 g++-x86-64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-4 gcc-15-base_15.2.0-4 gcc-15-cross-base_15.2.0-4cross1 gcc-15-powerpc64le-linux-gnu_15.2.0-4cross1 gcc-15-powerpc64le-linux-gnu-base_15.2.0-4cross1 gcc-15-x86-64-linux-gnu_15.2.0-4 gcc-powerpc64le-linux-gnu_4:15.2.0-4 gcc-x86-64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.1.8 libarchive-zip-perl_1.68-1 libasan8_15.2.0-4 libasan8-ppc64el-cross_15.2.0-4cross1 libatomic1_15.2.0-4 libatomic1-ppc64el-cross_15.2.0-4cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1 libbinutils_2.45-7 libblkid1_2.41.2-4 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libc6-dev-ppc64el-cross_2.41-11cross1 libc6-ppc64el-cross_2.41-11cross1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcc1-0_15.2.0-4 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-7 libctf0_2.45-7 libdb5.3t64_5.3.28+dfsg2-10 libdebconfclient0_0.280 libdebhelper-perl_13.28 libdpkg-perl_1.22.21 libelf1t64_0.193-3 libfakeroot_1.37.1.2-1 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-4 libgcc-15-dev-ppc64el-cross_15.2.0-4cross1 libgcc-s1_15.2.0-4 libgcc-s1-ppc64el-cross_15.2.0-4cross1 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-4 libgomp1-ppc64el-cross_15.2.0-4cross1 libgprofng0_2.45-7 libhogweed6t64_3.10.2-1 libhwasan0_15.2.0-4 libisl23_0.27-1 libitm1_15.2.0-4 libitm1-ppc64el-cross_15.2.0-4cross1 libjansson4_2.14-2+b3 liblocale-gettext-perl_1.07-7+b1 liblsan0_15.2.0-4 liblsan0-ppc64el-cross_15.2.0-4cross1 liblz4-1_1.10.0-4 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libnettle8t64_3.10.2-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-6 libpipeline1_1.5.8-1 libquadmath0_15.2.0-4 libquadmath0-ppc64el-cross_15.2.0-4cross1 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsepol2_3.8.1-1 libsframe2_2.45-7 libsimde-dev_0.8.2-3 libsmartcols1_2.41.2-4 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-4 libstdc++-15-dev-ppc64el-cross_15.2.0-4cross1 libstdc++6_15.2.0-4 libstdc++6-ppc64el-cross_15.2.0-4cross1 libsystemd0_258.1-1 libtinfo6_6.5+20250216-2 libtool_2.5.4-5 libtsan2_15.2.0-4 libtsan2-ppc64el-cross_15.2.0-4cross1 libubsan1_15.2.0-4 libubsan1-ppc64el-cross_15.2.0-4cross1 libuchardet0_0.0.8-2 libudev1_258.1-1 libunistring5_1.3-2 libuuid1_2.41.2-4 libxml2-16_2.14.6+dfsg-0.1 libxxhash0_0.8.3-2 libzstd1_1.5.7+dfsg-2 linux-libc-dev_6.16.12-2 linux-libc-dev-ppc64el-cross_6.12.38-1cross1 login_1:4.16.0-2+really2.41.2-4 login.defs_1:4.18.0-1 m4_1.4.20-2 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 mount_2.41.2-4 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 openssl-provider-legacy_3.5.4-1 passwd_1:4.18.0-1 patch_2.8-2 perl_5.40.1-6 perl-base_5.40.1-6 perl-modules-5.40_5.40.1-6 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.26 sqv_1.3.0-3 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-5 util-linux_2.41.2-4 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: gmap Binary: gmap Architecture: any Version: 2025-07-31+ds-1 Maintainer: Debian Med Packaging Team Uploaders: Shaun Jackman , Andreas Tille , Alexandre Mestiashvili , Étienne Mollier Homepage: http://research-pub.gene.com/gmap Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/gmap Vcs-Git: https://salsa.debian.org/med-team/gmap.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), architecture-is-little-endian, help2man, libbz2-dev, zlib1g-dev, debhelper, libsimde-dev Package-List: gmap deb science optional arch=any Checksums-Sha1: 18211986abc26a9573d189f5985bccd0aaf2b6b7 2565440 gmap_2025-07-31+ds.orig.tar.xz 9b28dea50107dd96060fe2907d49d675eb7cd530 13692 gmap_2025-07-31+ds-1.debian.tar.xz Checksums-Sha256: 85bb476498eda60c212d54ec7b595aeb4dd8795b8d64a408344516fc7db25186 2565440 gmap_2025-07-31+ds.orig.tar.xz 8981a8cda9214a810626181f227a8ad435b52beb0d6793914c97572470e02716 13692 gmap_2025-07-31+ds-1.debian.tar.xz Files: 358bc454d0effc84e7bf1f26533e5fb8 2565440 gmap_2025-07-31+ds.orig.tar.xz 1ffc4ca586d4740ff6ff87128b1bb5a0 13692 gmap_2025-07-31+ds-1.debian.tar.xz Dgit: 3d0182927e59a141d92bb15ed9d0415fc4618220 debian archive/debian/2025-07-31+ds-1 https://git.dgit.debian.org/gmap -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmjgI9QUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdondQ/+JYVYNmiS/poHYtQ0lMsI65bn01BA a49LYIPzkHocF+8u2HopPMujT2eekWvW5aNuH4spMlqjJ2oEWBlX/V1pF1BaqRN/ UGfwgdczN/ZJtehnBUoz7wYnFz2xNSr6yvIWltsZgMNrC3caKFq/aVKrZn5ugKrv 63updjIRuT/ivjDtGM0gJ6KGXwaknV5NCegLZFfb5JU4tBvnCYhM3V0XVKhHrecJ XPdI0+ApBmPhl4RF5y/MdIjE51kYUnaZC2kWiY5EuDVtlzE/hrMbrcPEA8nSxqoB XgeAUOWIikr1h6podPL9ibLScBsTpvJYIP2DepjjTRigQYoOWo3V6v4hhwVGt4XK eRPw0glB6PIBnl4bIDyA0PGj4bUxSUARQz6A7wIgdkut4m3mifSJcl/rVtErIvkl gbArp1n+gMRSi0Fqjm2VS6skYibO+VNXdY9boGzX8ZOnyMr3sR8EuH/q7pKfokS5 VcCABJZPxYzTihFP5yWwlioB5KCYk1/DAhhIpsIG+BvFRVbyvXEA+QWCxjHpdS/A YJ3R0BIiNeGrNaiOwEJsAUg1IJiYalKplkYRugrt4UBNXP+omRjhTFmTI9vD4S8Z iypYywic2aw+FyYfUiK/0YfEvXc7evT5FfAhw9egW8F/M3R5c5Q2Zu5YnFRlJliW v7dz+CRTGikEu6U= =4UkW -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./gmap_2025-07-31+ds-1.dsc: no acceptable signature found dpkg-source: info: extracting gmap in /<> dpkg-source: info: unpacking gmap_2025-07-31+ds.orig.tar.xz dpkg-source: info: unpacking gmap_2025-07-31+ds-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install-data-local dpkg-source: info: applying remove_getopt_code_copy.patch dpkg-source: info: applying simd_fixes Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.yvEUSbQFfx/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-a6060d45-a3a8-4d74-b529-5cb9f459e05e SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package gmap dpkg-buildpackage: info: source version 2025-07-31+ds-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean --builddir build debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--builddir=build dh_clean -O--builddir=build debian/rules binary-arch dh binary-arch --builddir build dh_update_autotools_config -a -O--builddir=build dh_autoreconf -a -O--builddir=build configure.ac:104: installing 'config/compile' configure.ac:85: installing 'config/config.guess' configure.ac:85: installing 'config/config.sub' configure.ac:109: installing 'config/install-sh' configure.ac:109: installing 'config/missing' Makefile.am: installing './INSTALL' src/Makefile.am: installing 'config/depcomp' src/Makefile.am:870: warning: variable 'dist_compare2truth_SOURCES' is defined but no program or src/Makefile.am:870: library has 'compare2truth' as canonical name (possible typo) src/Makefile.am:1216: warning: variable 'dist_gcount_bulk_SOURCES' is defined but no program or src/Makefile.am:1216: library has 'gcount_bulk' as canonical name (possible typo) src/Makefile.am:1242: warning: variable 'dist_gcount_sc_SOURCES' is defined but no program or src/Makefile.am:1242: library has 'gcount_sc' as canonical name (possible typo) src/Makefile.am:216: warning: variable 'dist_gexact_SOURCES' is defined but no program or src/Makefile.am:216: library has 'gexact' as canonical name (possible typo) src/Makefile.am:742: warning: variable 'dist_gexact_arm_SOURCES' is defined but no program or src/Makefile.am:742: library has 'gexact_arm' as canonical name (possible typo) src/Makefile.am:772: warning: variable 'dist_gexact_avx2_SOURCES' is defined but no program or src/Makefile.am:772: library has 'gexact_avx2' as canonical name (possible typo) src/Makefile.am:778: warning: variable 'dist_gexact_avx512_SOURCES' is defined but no program or src/Makefile.am:778: library has 'gexact_avx512' as canonical name (possible typo) src/Makefile.am:784: warning: variable 'dist_gexact_avx512bw_SOURCES' is defined but no program or src/Makefile.am:784: library has 'gexact_avx512bw' as canonical name (possible typo) src/Makefile.am:736: warning: variable 'dist_gexact_nosimd_SOURCES' is defined but no program or src/Makefile.am:736: library has 'gexact_nosimd' as canonical name (possible typo) src/Makefile.am:748: warning: variable 'dist_gexact_sse2_SOURCES' is defined but no program or src/Makefile.am:748: library has 'gexact_sse2' as canonical name (possible typo) src/Makefile.am:760: warning: variable 'dist_gexact_sse41_SOURCES' is defined but no program or src/Makefile.am:760: library has 'gexact_sse41' as canonical name (possible typo) src/Makefile.am:766: warning: variable 'dist_gexact_sse42_SOURCES' is defined but no program or src/Makefile.am:766: library has 'gexact_sse42' as canonical name (possible typo) src/Makefile.am:754: warning: variable 'dist_gexact_ssse3_SOURCES' is defined but no program or src/Makefile.am:754: library has 'gexact_ssse3' as canonical name (possible typo) src/Makefile.am:223: warning: variable 'dist_gfilter_SOURCES' is defined but no program or src/Makefile.am:223: library has 'gfilter' as canonical name (possible typo) src/Makefile.am:816: warning: variable 'dist_gfilter_arm_SOURCES' is defined but no program or src/Makefile.am:816: library has 'gfilter_arm' as canonical name (possible typo) src/Makefile.am:846: warning: variable 'dist_gfilter_avx2_SOURCES' is defined but no program or src/Makefile.am:846: library has 'gfilter_avx2' as canonical name (possible typo) src/Makefile.am:852: warning: variable 'dist_gfilter_avx512_SOURCES' is defined but no program or src/Makefile.am:852: library has 'gfilter_avx512' as canonical name (possible typo) src/Makefile.am:858: warning: variable 'dist_gfilter_avx512bw_SOURCES' is defined but no program or src/Makefile.am:858: library has 'gfilter_avx512bw' as canonical name (possible typo) src/Makefile.am:810: warning: variable 'dist_gfilter_nosimd_SOURCES' is defined but no program or src/Makefile.am:810: library has 'gfilter_nosimd' as canonical name (possible typo) src/Makefile.am:822: warning: variable 'dist_gfilter_sse2_SOURCES' is defined but no program or src/Makefile.am:822: library has 'gfilter_sse2' as canonical name (possible typo) src/Makefile.am:834: warning: variable 'dist_gfilter_sse41_SOURCES' is defined but no program or src/Makefile.am:834: library has 'gfilter_sse41' as canonical name (possible typo) src/Makefile.am:840: warning: variable 'dist_gfilter_sse42_SOURCES' is defined but no program or src/Makefile.am:840: library has 'gfilter_sse42' as canonical name (possible typo) src/Makefile.am:828: warning: variable 'dist_gfilter_ssse3_SOURCES' is defined but no program or src/Makefile.am:828: library has 'gfilter_ssse3' as canonical name (possible typo) src/Makefile.am:1132: warning: variable 'dist_iit_pileup_SOURCES' is defined but no program or src/Makefile.am:1132: library has 'iit_pileup' as canonical name (possible typo) src/Makefile.am:1154: warning: variable 'dist_sam_sort_SOURCES' is defined but no program or src/Makefile.am:1154: library has 'sam_sort' as canonical name (possible typo) src/Makefile.am:1172: warning: variable 'dist_umi_correct_SOURCES' is defined but no program or src/Makefile.am:1172: library has 'umi_correct' as canonical name (possible typo) src/Makefile.am:1191: warning: variable 'dist_velocity_counts_SOURCES' is defined but no program or src/Makefile.am:1191: library has 'velocity_counts' as canonical name (possible typo) src/Makefile.am:869: warning: variable 'compare2truth_LDADD' is defined but no program or src/Makefile.am:869: library has 'compare2truth' as canonical name (possible typo) src/Makefile.am:1215: warning: variable 'gcount_bulk_LDADD' is defined but no program or src/Makefile.am:1215: library has 'gcount_bulk' as canonical name (possible typo) src/Makefile.am:1241: warning: variable 'gcount_sc_LDADD' is defined but no program or src/Makefile.am:1241: library has 'gcount_sc' as canonical name (possible typo) src/Makefile.am:215: warning: variable 'gexact_LDADD' is defined but no program or src/Makefile.am:215: library has 'gexact' as canonical name (possible typo) src/Makefile.am:741: warning: variable 'gexact_arm_LDADD' is defined but no program or src/Makefile.am:741: library has 'gexact_arm' as canonical name (possible typo) src/Makefile.am:771: warning: variable 'gexact_avx2_LDADD' is defined but no program or src/Makefile.am:771: library has 'gexact_avx2' as canonical name (possible typo) src/Makefile.am:777: warning: variable 'gexact_avx512_LDADD' is defined but no program or src/Makefile.am:777: library has 'gexact_avx512' as canonical name (possible typo) src/Makefile.am:783: warning: variable 'gexact_avx512bw_LDADD' is defined but no program or src/Makefile.am:783: library has 'gexact_avx512bw' as canonical name (possible typo) src/Makefile.am:735: warning: variable 'gexact_nosimd_LDADD' is defined but no program or src/Makefile.am:735: library has 'gexact_nosimd' as canonical name (possible typo) src/Makefile.am:747: warning: variable 'gexact_sse2_LDADD' is defined but no program or src/Makefile.am:747: library has 'gexact_sse2' as canonical name (possible typo) src/Makefile.am:759: warning: variable 'gexact_sse41_LDADD' is defined but no program or src/Makefile.am:759: library has 'gexact_sse41' as canonical name (possible typo) src/Makefile.am:765: warning: variable 'gexact_sse42_LDADD' is defined but no program or src/Makefile.am:765: library has 'gexact_sse42' as canonical name (possible typo) src/Makefile.am:753: warning: variable 'gexact_ssse3_LDADD' is defined but no program or src/Makefile.am:753: library has 'gexact_ssse3' as canonical name (possible typo) src/Makefile.am:222: warning: variable 'gfilter_LDADD' is defined but no program or src/Makefile.am:222: library has 'gfilter' as canonical name (possible typo) src/Makefile.am:815: warning: variable 'gfilter_arm_LDADD' is defined but no program or src/Makefile.am:815: library has 'gfilter_arm' as canonical name (possible typo) src/Makefile.am:845: warning: variable 'gfilter_avx2_LDADD' is defined but no program or src/Makefile.am:845: library has 'gfilter_avx2' as canonical name (possible typo) src/Makefile.am:851: warning: variable 'gfilter_avx512_LDADD' is defined but no program or src/Makefile.am:851: library has 'gfilter_avx512' as canonical name (possible typo) src/Makefile.am:857: warning: variable 'gfilter_avx512bw_LDADD' is defined but no program or src/Makefile.am:857: library has 'gfilter_avx512bw' as canonical name (possible typo) src/Makefile.am:809: warning: variable 'gfilter_nosimd_LDADD' is defined but no program or src/Makefile.am:809: library has 'gfilter_nosimd' as canonical name (possible typo) src/Makefile.am:821: warning: variable 'gfilter_sse2_LDADD' is defined but no program or src/Makefile.am:821: library has 'gfilter_sse2' as canonical name (possible typo) src/Makefile.am:833: warning: variable 'gfilter_sse41_LDADD' is defined but no program or src/Makefile.am:833: library has 'gfilter_sse41' as canonical name (possible typo) src/Makefile.am:839: warning: variable 'gfilter_sse42_LDADD' is defined but no program or src/Makefile.am:839: library has 'gfilter_sse42' as canonical name (possible typo) src/Makefile.am:827: warning: variable 'gfilter_ssse3_LDADD' is defined but no program or src/Makefile.am:827: library has 'gfilter_ssse3' as canonical name (possible typo) src/Makefile.am:1131: warning: variable 'iit_pileup_LDADD' is defined but no program or src/Makefile.am:1131: library has 'iit_pileup' as canonical name (possible typo) src/Makefile.am:1153: warning: variable 'sam_sort_LDADD' is defined but no program or src/Makefile.am:1153: library has 'sam_sort' as canonical name (possible typo) src/Makefile.am:1171: warning: variable 'umi_correct_LDADD' is defined but no program or src/Makefile.am:1171: library has 'umi_correct' as canonical name (possible typo) src/Makefile.am:1190: warning: variable 'velocity_counts_LDADD' is defined but no program or src/Makefile.am:1190: library has 'velocity_counts' as canonical name (possible typo) src/Makefile.am:868: warning: variable 'compare2truth_LDFLAGS' is defined but no program or src/Makefile.am:868: library has 'compare2truth' as canonical name (possible typo) src/Makefile.am:1214: warning: variable 'gcount_bulk_LDFLAGS' is defined but no program or src/Makefile.am:1214: library has 'gcount_bulk' as canonical name (possible typo) src/Makefile.am:1240: warning: variable 'gcount_sc_LDFLAGS' is defined but no program or src/Makefile.am:1240: library has 'gcount_sc' as canonical name (possible typo) src/Makefile.am:214: warning: variable 'gexact_LDFLAGS' is defined but no program or src/Makefile.am:214: library has 'gexact' as canonical name (possible typo) src/Makefile.am:740: warning: variable 'gexact_arm_LDFLAGS' is defined but no program or src/Makefile.am:740: library has 'gexact_arm' as canonical name (possible typo) src/Makefile.am:770: warning: variable 'gexact_avx2_LDFLAGS' is defined but no program or src/Makefile.am:770: library has 'gexact_avx2' as canonical name (possible typo) src/Makefile.am:776: warning: variable 'gexact_avx512_LDFLAGS' is defined but no program or src/Makefile.am:776: library has 'gexact_avx512' as canonical name (possible typo) src/Makefile.am:782: warning: variable 'gexact_avx512bw_LDFLAGS' is defined but no program or src/Makefile.am:782: library has 'gexact_avx512bw' as canonical name (possible typo) src/Makefile.am:734: warning: variable 'gexact_nosimd_LDFLAGS' is defined but no program or src/Makefile.am:734: library has 'gexact_nosimd' as canonical name (possible typo) src/Makefile.am:746: warning: variable 'gexact_sse2_LDFLAGS' is defined but no program or src/Makefile.am:746: library has 'gexact_sse2' as canonical name (possible typo) src/Makefile.am:758: warning: variable 'gexact_sse41_LDFLAGS' is defined but no program or src/Makefile.am:758: library has 'gexact_sse41' as canonical name (possible typo) src/Makefile.am:764: warning: variable 'gexact_sse42_LDFLAGS' is defined but no program or src/Makefile.am:764: library has 'gexact_sse42' as canonical name (possible typo) src/Makefile.am:752: warning: variable 'gexact_ssse3_LDFLAGS' is defined but no program or src/Makefile.am:752: library has 'gexact_ssse3' as canonical name (possible typo) src/Makefile.am:221: warning: variable 'gfilter_LDFLAGS' is defined but no program or src/Makefile.am:221: library has 'gfilter' as canonical name (possible typo) src/Makefile.am:814: warning: variable 'gfilter_arm_LDFLAGS' is defined but no program or src/Makefile.am:814: library has 'gfilter_arm' as canonical name (possible typo) src/Makefile.am:844: warning: variable 'gfilter_avx2_LDFLAGS' is defined but no program or src/Makefile.am:844: library has 'gfilter_avx2' as canonical name (possible typo) src/Makefile.am:850: warning: variable 'gfilter_avx512_LDFLAGS' is defined but no program or src/Makefile.am:850: library has 'gfilter_avx512' as canonical name (possible typo) src/Makefile.am:856: warning: variable 'gfilter_avx512bw_LDFLAGS' is defined but no program or src/Makefile.am:856: library has 'gfilter_avx512bw' as canonical name (possible typo) src/Makefile.am:808: warning: variable 'gfilter_nosimd_LDFLAGS' is defined but no program or src/Makefile.am:808: library has 'gfilter_nosimd' as canonical name (possible typo) src/Makefile.am:820: warning: variable 'gfilter_sse2_LDFLAGS' is defined but no program or src/Makefile.am:820: library has 'gfilter_sse2' as canonical name (possible typo) src/Makefile.am:832: warning: variable 'gfilter_sse41_LDFLAGS' is defined but no program or src/Makefile.am:832: library has 'gfilter_sse41' as canonical name (possible typo) src/Makefile.am:838: warning: variable 'gfilter_sse42_LDFLAGS' is defined but no program or src/Makefile.am:838: library has 'gfilter_sse42' as canonical name (possible typo) src/Makefile.am:826: warning: variable 'gfilter_ssse3_LDFLAGS' is defined but no program or src/Makefile.am:826: library has 'gfilter_ssse3' as canonical name (possible typo) src/Makefile.am:1130: warning: variable 'iit_pileup_LDFLAGS' is defined but no program or src/Makefile.am:1130: library has 'iit_pileup' as canonical name (possible typo) src/Makefile.am:1152: warning: variable 'sam_sort_LDFLAGS' is defined but no program or src/Makefile.am:1152: library has 'sam_sort' as canonical name (possible typo) src/Makefile.am:1170: warning: variable 'umi_correct_LDFLAGS' is defined but no program or src/Makefile.am:1170: library has 'umi_correct' as canonical name (possible typo) src/Makefile.am:1189: warning: variable 'velocity_counts_LDFLAGS' is defined but no program or src/Makefile.am:1189: library has 'velocity_counts' as canonical name (possible typo) parallel-tests: installing 'config/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' rm -Rf src/simde dh_auto_configure -- --with-gmapdb=/var/cache/gmap \ --bindir=/usr/lib/gmap --disable-simd cd build && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --with-gmapdb=/var/cache/gmap --bindir=/usr/lib/gmap --disable-simd checking package version... 2025-07-31 configure: error: cannot find /etc/dpkg-cross/cross-config.ppc64el cd build && tail -v -n \+0 config.log ==> config.log <== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by gmap configure 2025-07-31, which was generated by GNU Autoconf 2.72. Invocation command line was $ ../configure --build=x86_64-linux-gnu --prefix=/usr '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules '--libdir=${prefix}/lib/powerpc64le-linux-gnu' --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --with-gmapdb=/var/cache/gmap --bindir=/usr/lib/gmap --disable-simd ## --------- ## ## Platform. ## ## --------- ## hostname = debian-ci-siliconvalley uname -m = x86_64 uname -r = 6.1.0-32-amd64 uname -s = Linux uname -v = #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/sbin/ PATH: /usr/local/bin/ PATH: /usr/sbin/ PATH: /usr/bin/ PATH: /sbin/ PATH: /bin/ PATH: /usr/games/ ## ----------- ## ## Core tests. ## ## ----------- ## configure:2752: looking for aux files: missing install-sh compile config.guess config.sub configure:2765: trying ../config/ configure:2794: ../config/missing found configure:2776: ../config/install-sh found configure:2794: ../config/compile found configure:2794: ../config/config.guess found configure:2794: ../config/config.sub found configure:2906: checking package version configure:2908: result: 2025-07-31 configure:2939: error: cannot find /etc/dpkg-cross/cross-config.ppc64el ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set=set ac_cv_env_CFLAGS_value='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -Werror=implicit-function-declaration' ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value='-Wdate-time -D_FORTIFY_SOURCE=2' ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-Wl,-z,relro -Wl,-z,now' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set=set ac_cv_env_build_alias_value=x86_64-linux-gnu ac_cv_env_host_alias_set=set ac_cv_env_host_alias_value=powerpc64le-linux-gnu ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='' ALLOCA='' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='' AMTAR='' AM_BACKSLASH='' AM_DEFAULT_V='' AM_DEFAULT_VERBOSITY='' AM_V='' AUTOCONF='' AUTOHEADER='' AUTOMAKE='' AWK='' BINDIR='' BZLIB_LIBS='' CC='' CCDEPMODE='' CFLAGS='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DSIMDE_ENABLE_OPENMP -fomit-frame-pointer -Werror=implicit-function-declaration' CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2' CSCOPE='' CTAGS='' CYGPATH_W='' DEFS='' DEPDIR='' ECHO_C='' ECHO_N='-n' ECHO_T='' ETAGS='' EXEEXT='' FULLDIST_FALSE='' FULLDIST_TRUE='' GMAPDB='' HAVE_INLINE='' INSTALL_DATA='' INSTALL_PROGRAM='' INSTALL_SCRIPT='' INSTALL_STRIP_PROGRAM='' LDFLAGS='-Wl,-z,relro -Wl,-z,now' LIBGMAP_SO_VERSION='' LIBOBJS='' LIBS='' LTLIBOBJS='' MAINT='' MAINTAINER_FALSE='' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='' MAINTAINER_TRUE='' MAKEINFO='' MAKE_ARM_FALSE='' MAKE_ARM_TRUE='' MAKE_AVX2_FALSE='' MAKE_AVX2_TRUE='' MAKE_AVX512BW_FALSE='' MAKE_AVX512BW_TRUE='' MAKE_AVX512_FALSE='' MAKE_AVX512_TRUE='' MAKE_SSE2_FALSE='' MAKE_SSE2_TRUE='' MAKE_SSE4_1_FALSE='' MAKE_SSE4_1_TRUE='' MAKE_SSE4_2_FALSE='' MAKE_SSE4_2_TRUE='' MAKE_SSSE3_FALSE='' MAKE_SSSE3_TRUE='' MKDIR_P='' OBJEXT='' PACKAGE='' PACKAGE_BUGREPORT='Thomas Wu ' PACKAGE_NAME='gmap' PACKAGE_STRING='gmap 2025-07-31' PACKAGE_TARNAME='gmap' PACKAGE_URL='' PACKAGE_VERSION='2025-07-31' PATH_SEPARATOR=':' PERL='' POPCNT_CFLAGS='' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' SET_MAKE='' SHELL='/bin/bash' SIMD_AVX2_CFLAGS='' SIMD_AVX512_CFLAGS='' SIMD_SSE2_CFLAGS='' SIMD_SSE4_1_CFLAGS='' SIMD_SSE4_2_CFLAGS='' SIMD_SSSE3_CFLAGS='' STRIP='' VERSION='' ZLIB_LIBS='' ac_ct_CC='' acx_pthread_config='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='' am__include='' am__isrc='' am__leading_dot='' am__nodep='' am__quote='' am__rm_f_notfound='' am__tar='' am__untar='' am__xargs_n='' bindir='/usr/lib/gmap' build='x86_64-linux-gnu' build_alias='x86_64-linux-gnu' build_cpu='' build_os='' build_vendor='' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' host='powerpc64le-linux-gnu' host_alias='powerpc64le-linux-gnu' host_cpu='' host_os='' host_vendor='' htmldir='${docdir}' includedir='${prefix}/include' infodir='${prefix}/share/info' install_sh='' libdir='${prefix}/lib/powerpc64le-linux-gnu' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='/var' mandir='${prefix}/share/man' mkdir_p='' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/usr' program_transform_name='s,x,x,' psdir='${docdir}' runstatedir='/run' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='/etc' target='' target_alias='' target_cpu='' target_os='' target_vendor='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "gmap" #define PACKAGE_TARNAME "gmap" #define PACKAGE_VERSION "2025-07-31" #define PACKAGE_STRING "gmap 2025-07-31" #define PACKAGE_BUGREPORT "Thomas Wu " #define PACKAGE_URL "" configure: exit 1 dh_auto_configure: error: cd build && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --with-gmapdb=/var/cache/gmap --bindir=/usr/lib/gmap --disable-simd returned exit code 1 make[1]: *** [debian/rules:22: override_dh_auto_configure] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:17: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2025-10-17T01:50:51Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ --------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 13 Distribution: unstable Fail-Stage: build Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 13 Job: gmap_2025-07-31+ds-1 Machine Architecture: amd64 Package: gmap Package-Time: 42 Source-Version: 2025-07-31+ds-1 Space: n/a Status: attempted Version: 2025-07-31+ds-1 -------------------------------------------------------------------------------- Finished at 2025-10-17T01:50:51Z Build needed 00:00:42, no disk space