sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | hmmer2 2.3.2+dfsg-7 (armel) Mon, 05 Dec 2022 08:02:11 +0000 | +==============================================================================+ Package: hmmer2 Version: 2.3.2+dfsg-7 Source Version: 2.3.2+dfsg-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-c690c348-aeb5-420b-bef3-807c0ac0ab6d' with '<>' I: NOTICE: Log filtering will replace 'build/hmmer2-ubH0uJ/resolver-sE56Ea' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [161 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-12-05-0203.20-F-2022-12-05-0203.20.pdiff [26.2 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-12-05-0203.20-F-2022-12-05-0203.20.pdiff [26.2 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-12-05-0203.20-F-2022-12-05-0203.20.pdiff [20.7 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-12-05-0203.20-F-2022-12-05-0203.20.pdiff [20.7 kB] Get:6 http://localhost:3142/debian sid/main armel Packages [8983 kB] Fetched 9318 kB in 2s (4845 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'hmmer2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/hmmer2.git Please use: git clone https://salsa.debian.org/med-team/hmmer2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 348 kB of source archives. Get:1 http://localhost:3142/debian sid/main hmmer2 2.3.2+dfsg-7 (dsc) [2268 B] Get:2 http://localhost:3142/debian sid/main hmmer2 2.3.2+dfsg-7 (tar) [332 kB] Get:3 http://localhost:3142/debian sid/main hmmer2 2.3.2+dfsg-7 (diff) [14.2 kB] Fetched 348 kB in 0s (7347 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/hmmer2-ubH0uJ/hmmer2-2.3.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/hmmer2-ubH0uJ' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libperl4-corelibs-perl, libsquid-dev, pkg-config, dh-exec, rename, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), libperl4-corelibs-perl, libsquid-dev, pkg-config, dh-exec, rename, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [439 B] Get:5 copy:/<>/apt_archive ./ Packages [532 B] Fetched 1928 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libperl4-corelibs-perl libpipeline1 libpkgconf3 libsquid-dev:armel libsquid1:armel libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db pkg-config:armel pkgconf:armel pkgconf-bin po-debconf rename sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel krb5-doc:armel krb5-user:armel biosquid:armel libstdc++-11-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl krb5-locales:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libperl4-corelibs-perl libpipeline1 libpkgconf3 libsquid-dev:armel libsquid1:armel libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db pkg-config:armel pkgconf:armel pkgconf-bin po-debconf rename sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 103 newly installed, 0 to remove and 0 not upgraded. Need to get 83.1 MB of archives. After this operation, 337 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [956 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b3 [15.1 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-10 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-9 [916 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-4 [86.2 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.1-1 [1384 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-10 [495 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.39-8 [3232 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi-base amd64 12.2.0-9cross2 [37.3 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [8663 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:12.2.0-1 [17.2 kB] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.19 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-9cross2 [32.8 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.36-3cross1 [885 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 12.2.0-9cross2 [38.4 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 12.2.0-9cross2 [96.8 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 12.2.0-9cross2 [8912 B] Get:29 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 12.2.0-9cross2 [2092 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 12.2.0-9cross2 [464 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 12.2.0-9cross2 [862 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-armel-cross all 12.2.0-9cross2 [732 kB] Get:33 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [17.0 MB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:12.2.0-1 [1452 B] Get:35 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armel-cross all 6.0.6-2cross1 [1763 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.36-3cross1 [1284 kB] Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-armel-cross all 12.2.0-9cross2 [2033 kB] Get:38 http://localhost:3142/debian sid/main amd64 g++-12-arm-linux-gnueabi amd64 12.2.0-9cross2 [9594 kB] Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:12.2.0-1 [1176 B] Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:42 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b2 [687 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.19 [15.3 kB] Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.19 [25.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.9 [6704 B] Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.1 [80.8 kB] Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-2 [19.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-2 [8556 B] Get:63 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-1 [172 kB] Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14+20220924-2 [109 kB] Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-10 [1300 kB] Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.1 [941 kB] Get:69 http://localhost:3142/debian sid/main amd64 dh-exec amd64 0.27 [27.8 kB] Get:70 http://localhost:3142/debian sid/main armel gcc-11-base armel 11.3.0-8 [209 kB] Get:71 http://localhost:3142/debian sid/main armel gcc-12-base armel 12.2.0-9 [37.1 kB] Get:72 http://localhost:3142/debian sid/main armel libgcc-s1 armel 12.2.0-9 [38.4 kB] Get:73 http://localhost:3142/debian sid/main armel libc6 armel 2.36-6 [2184 kB] Get:74 http://localhost:3142/debian sid/main armel libasan6 armel 11.3.0-8 [1945 kB] Get:75 http://localhost:3142/debian sid/main armel libatomic1 armel 12.2.0-9 [9152 B] Get:76 http://localhost:3142/debian sid/main armel linux-libc-dev armel 6.0.10-2 [1650 kB] Get:77 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.33-1 [96.0 kB] Get:78 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.33-1 [125 kB] Get:79 http://localhost:3142/debian sid/main armel libcom-err2 armel 1.46.6~rc1-1+b1 [14.2 kB] Get:80 http://localhost:3142/debian sid/main armel libkrb5support0 armel 1.20.1-1 [29.2 kB] Get:81 http://localhost:3142/debian sid/main armel libk5crypto3 armel 1.20.1-1 [74.0 kB] Get:82 http://localhost:3142/debian sid/main armel libkeyutils1 armel 1.6.3-1 [14.8 kB] Get:83 http://localhost:3142/debian sid/main armel libssl3 armel 3.0.7-1 [1621 kB] Get:84 http://localhost:3142/debian sid/main armel libkrb5-3 armel 1.20.1-1 [284 kB] Get:85 http://localhost:3142/debian sid/main armel libgssapi-krb5-2 armel 1.20.1-1 [110 kB] Get:86 http://localhost:3142/debian sid/main armel libtirpc3 armel 1.3.3+ds-1 [72.0 kB] Get:87 http://localhost:3142/debian sid/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:88 http://localhost:3142/debian sid/main armel libtirpc-dev armel 1.3.3+ds-1 [182 kB] Get:89 http://localhost:3142/debian sid/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:90 http://localhost:3142/debian sid/main armel libc6-dev armel 2.36-6 [1287 kB] Get:91 http://localhost:3142/debian sid/main armel libgomp1 armel 12.2.0-9 [99.6 kB] Get:92 http://localhost:3142/debian sid/main armel libstdc++6 armel 12.2.0-9 [506 kB] Get:93 http://localhost:3142/debian sid/main armel libubsan1 armel 12.2.0-9 [863 kB] Get:94 http://localhost:3142/debian sid/main armel libgcc-11-dev armel 11.3.0-8 [702 kB] Get:95 http://localhost:3142/debian sid/main amd64 libperl4-corelibs-perl all 0.004-3 [38.5 kB] Get:96 http://localhost:3142/debian sid/main amd64 libpkgconf3 amd64 1.8.0-11 [35.7 kB] Get:97 http://localhost:3142/debian sid/main armel libsquid1 armel 1.9g+cvs20050121-12 [66.4 kB] Get:98 http://localhost:3142/debian sid/main armel libsquid-dev armel 1.9g+cvs20050121-12 [134 kB] Get:99 http://localhost:3142/debian sid/main armel libstdc++-11-dev armel 11.3.0-8 [1974 kB] Get:100 http://localhost:3142/debian sid/main amd64 pkgconf-bin amd64 1.8.0-11 [29.2 kB] Get:101 http://localhost:3142/debian sid/main armel pkgconf armel 1.8.0-11 [25.6 kB] Get:102 http://localhost:3142/debian sid/main armel pkg-config armel 1.8.0-11 [13.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 rename all 1.31-1 [22.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 83.1 MB in 1s (70.0 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15686 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-4+b3_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-10_amd64.deb ... Unpacking gettext-base (0.21-10) ... 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Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up gcc-11-base:armel (11.3.0-8) ... Setting up libfile-which-perl (1.27-2) ... Setting up binutils-arm-linux-gnueabi (2.39-8) ... Setting up libicu72:amd64 (72.1-3) ... Setting up gcc-12-cross-base (12.2.0-9cross2) ... Setting up bsdextrautils (2.38.1-4) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.1) ... Setting up libperl4-corelibs-perl (0.004-3) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:armel (6.0.10-2) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-10) ... Setting up m4 (1.4.19-1) ... Setting up rename (1.31-1) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up file (1:5.41-4) ... Setting up libyaml-perl (1.30-2) ... Setting up linux-libc-dev-armel-cross (6.0.6-2cross1) ... Setting up gcc-12-base:armel (12.2.0-9) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.19) ... Setting up libpkgconf3:amd64 (1.8.0-11) ... Setting up autopoint (0.21-10) ... Setting up pkgconf-bin (1.8.0-11) ... Setting up autoconf (2.71-2) ... Setting up libc6-armel-cross (2.36-3cross1) ... Setting up sensible-utils (0.0.17) ... Setting up gcc-12-arm-linux-gnueabi-base:amd64 (12.2.0-9cross2) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libc6-dev-armel-cross (2.36-3cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:amd64 (0.188-1) ... Setting up cpp-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b2) ... Setting up liblocale-gettext-perl (1.07-4+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-2) ... Setting up gettext (0.21-10) ... Setting up libgomp1-armel-cross (12.2.0-9cross2) ... Setting up libtool (2.4.7-5) ... Setting up libgcc-s1-armel-cross (12.2.0-9cross2) ... Setting up libstdc++6-armel-cross (12.2.0-9cross2) ... Setting up libatomic1-armel-cross (12.2.0-9cross2) ... Setting up pkgconf:armel (1.8.0-11) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libubsan1-armel-cross (12.2.0-9cross2) ... Setting up pkg-config:armel (1.8.0-11) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.0-2) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-9) ... Setting up libasan8-armel-cross (12.2.0-9cross2) ... Setting up libgcc-12-dev-armel-cross (12.2.0-9cross2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libstdc++-12-dev-armel-cross (12.2.0-9cross2) ... Setting up debhelper (13.11.1) ... Setting up dh-exec (0.27) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-12-arm-linux-gnueabi (12.2.0-9cross2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-arm-linux-gnueabi (4:12.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.19) ... Setting up dpkg-cross (2.6.19) ... Setting up crossbuild-essential-armel (12.9) ... Setting up libgcc-s1:armel (12.2.0-9) ... Setting up libc6:armel (2.36-6) ... Setting up libsquid1:armel (1.9g+cvs20050121-12) ... Setting up libstdc++6:armel (12.2.0-9) ... Setting up libkeyutils1:armel (1.6.3-1) ... Setting up libcrypt1:armel (1:4.4.33-1) ... Setting up libcom-err2:armel (1.46.6~rc1-1+b1) ... Setting up libgomp1:armel (12.2.0-9) ... Setting up libsquid-dev:armel (1.9g+cvs20050121-12) ... Setting up libasan6:armel (11.3.0-8) ... Setting up libkrb5support0:armel (1.20.1-1) ... Setting up libatomic1:armel (12.2.0-9) ... Setting up libk5crypto3:armel (1.20.1-1) ... Setting up libubsan1:armel (12.2.0-9) ... Setting up libgcc-11-dev:armel (11.3.0-8) ... Setting up libcrypt-dev:armel (1:4.4.33-1) ... Setting up libssl3:armel (3.0.7-1) ... Setting up libkrb5-3:armel (1.20.1-1) ... Setting up libgssapi-krb5-2:armel (1.20.1-1) ... Setting up libtirpc3:armel (1.3.3+ds-1) ... Setting up libtirpc-dev:armel (1.3.3+ds-1) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libc6-dev:armel (2.36-6) ... Setting up libstdc++-11-dev:armel (11.3.0-8) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.36-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) amd64 (x86_64) Toolchain package versions: binutils_2.39-8 dpkg-dev_1.21.11 g++-11_11.3.0-8 g++-12_12.2.0-9 gcc-11_11.3.0-8 gcc-12_12.2.0-9 libc6-dev_2.36-6 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-9 libstdc++-12-dev-armel-cross_12.2.0-9cross2 libstdc++6_12.2.0-9 libstdc++6-armel-cross_12.2.0-9cross2 linux-libc-dev_6.0.10-2 Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3 base-passwd_3.6.1 bash_5.2-2+b1 binutils_2.39-8 binutils-arm-linux-gnueabi_2.39-8 binutils-common_2.39-8 binutils-x86-64-linux-gnu_2.39-8 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-1 cpp-11_11.3.0-8 cpp-12_12.2.0-9 cpp-12-arm-linux-gnueabi_12.2.0-9cross2 cpp-arm-linux-gnueabi_4:12.2.0-1 cross-config_2.6.19 crossbuild-essential-armel_12.9 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.4 dh-autoreconf_20 dh-exec_0.27 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-1 dpkg_1.21.11 dpkg-cross_2.6.19 dpkg-dev_1.21.11 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1+b1 fakeroot_1.30.1-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1 g++-11_11.3.0-8 g++-12_12.2.0-9 g++-12-arm-linux-gnueabi_12.2.0-9cross2 g++-arm-linux-gnueabi_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-8 gcc-11-base_11.3.0-8 gcc-12_12.2.0-9 gcc-12-arm-linux-gnueabi_12.2.0-9cross2 gcc-12-arm-linux-gnueabi-base_12.2.0-9cross2 gcc-12-base_12.2.0-9 gcc-12-cross-base_12.2.0-9cross2 gcc-9-base_9.5.0-2+b2 gcc-arm-linux-gnueabi_4:12.2.0-1 gettext_0.21-10 gettext-base_0.21-10 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan6_11.3.0-8 libasan8_12.2.0-9 libasan8-armel-cross_12.2.0-9cross2 libatomic1_12.2.0-9 libatomic1-armel-cross_12.2.0-9cross2 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1+b2 libbinutils_2.39-8 libblkid1_2.38.1-4 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-6 libc-dev-bin_2.36-6 libc6_2.36-6 libc6-armel-cross_2.36-3cross1 libc6-dev_2.36-6 libc6-dev-armel-cross_2.36-3cross1 libcap-ng0_0.8.3-1+b2 libcap2_1:2.44-1 libcc1-0_12.2.0-9 libcom-err2_1.46.6~rc1-1+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39-8 libctf0_2.39-8 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.1 libdebian-dpkgcross-perl_2.6.19 libdpkg-perl_1.21.11 libelf1_0.188-1 libext2fs2_1.46.6~rc1-1+b1 libfakeroot_1.30.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.0-2 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-8 libgcc-12-dev_12.2.0-9 libgcc-12-dev-armel-cross_12.2.0-9cross2 libgcc-s1_12.2.0-9 libgcc-s1-armel-cross_12.2.0-9cross2 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-9 libgomp1-armel-cross_12.2.0-9cross2 libgpg-error0_1.46-1 libgprofng0_2.39-8 libgssapi-krb5-2_1.20.1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-9 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 liblocale-gettext-perl_1.07-4+b3 liblsan0_12.2.0-9 liblz4-1_1.9.4-1 liblzma5_5.2.9-0.0 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpfr6_4.1.0-3 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-14 libperl4-corelibs-perl_0.004-3 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.7-1 libpkgconf3_1.8.0-11 libquadmath0_12.2.0-9 libseccomp2_2.5.4-1+b2 libselinux1_3.4-1+b3 libsemanage-common_3.4-1 libsemanage2_3.4-1+b3 libsepol2_3.4-2 libsmartcols1_2.38.1-4 libsquid-dev_1.9g+cvs20050121-12 libsquid1_1.9g+cvs20050121-12 libss2_1.46.6~rc1-1+b1 libssl3_3.0.7-1 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-9 libstdc++-12-dev-armel-cross_12.2.0-9cross2 libstdc++6_12.2.0-9 libstdc++6-armel-cross_12.2.0-9cross2 libsub-override-perl_0.09-4 libsystemd0_252.2-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-8 libtsan2_12.2.0-9 libubsan1_12.2.0-9 libubsan1-armel-cross_12.2.0-9cross2 libuchardet0_0.0.7-1 libudev1_252.2-1 libunistring2_1.0-2 libuuid1_2.38.1-4 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.14+dfsg-1.1+b2 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.10-2 linux-libc-dev-armel-cross_6.0.6-2cross1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1+b1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 mount_2.38.1-4 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 pkg-config_1.8.0-11 pkgconf_1.8.0-11 pkgconf-bin_1.8.0-11 po-debconf_1.0.21+nmu1 rename_1.31-1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.05-7 tar_1.34+dfsg-1.1 tzdata_2022f-1 ucf_3.0043 usrmerge_33 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 xz-utils_5.2.9-0.0 zlib1g_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: hmmer2 Binary: hmmer2, hmmer2-doc, libhmmer2-dev Architecture: any all Version: 2.3.2+dfsg-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Laszlo Kajan Homepage: http://hmmer.janelia.org/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/hmmer2 Vcs-Git: https://salsa.debian.org/med-team/hmmer2.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, libperl4-corelibs-perl, libsquid-dev, pkg-config Build-Depends: debhelper-compat (= 13), libperl4-corelibs-perl, libsquid-dev, pkg-config, dh-exec, rename Package-List: hmmer2 deb science optional arch=any hmmer2-doc deb doc optional arch=all libhmmer2-dev deb libdevel optional arch=any Checksums-Sha1: 7467176def6174e90edd239558b6fcc2cb8033df 331828 hmmer2_2.3.2+dfsg.orig.tar.xz 8b8be7c85950037ee38b0834a9f912b01299a921 14160 hmmer2_2.3.2+dfsg-7.debian.tar.xz Checksums-Sha256: f9cd50acc23743648cb7de020c249bce396c3d07e0afe7e5418620cffa07bb44 331828 hmmer2_2.3.2+dfsg.orig.tar.xz 5b652ba701a43cb03ab6b7d9773a2edc4998cc823e8cb0656fb4a321f29ec54f 14160 hmmer2_2.3.2+dfsg-7.debian.tar.xz Files: 4f8c9fd7c7de00fb8cfab499931ee4ba 331828 hmmer2_2.3.2+dfsg.orig.tar.xz 43fb94be1b5017bdb0f8fd5f44607c6c 14160 hmmer2_2.3.2+dfsg-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl9ZJhIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtE/4g//WTLhC+B3EX18TRqikrE2ScFIikGeNEP2 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signature: No public key dpkg-source: warning: cannot verify inline signature for ./hmmer2_2.3.2+dfsg-7.dsc: no acceptable signature found dpkg-source: info: extracting hmmer2 in /<> dpkg-source: info: unpacking hmmer2_2.3.2+dfsg.orig.tar.xz dpkg-source: info: unpacking hmmer2_2.3.2+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying version2-manpage dpkg-source: info: applying userguidepdf dpkg-source: info: applying spelling.patch dpkg-source: info: applying use_debian_packaged_biosquid.patch dpkg-source: info: applying build_libhmmer.a_with-fPIC.patch dpkg-source: info: applying add-runstatedir-option.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-c690c348-aeb5-420b-bef3-807c0ac0ab6d SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package hmmer2 dpkg-buildpackage: info: source version 2.3.2+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-threads --enable-lfs # --enable-pvm ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi --enable-threads --enable-lfs configure: loading site script /etc/dpkg-cross/cross-config.armel configure: configuring HMMER for your system. configure: This is a full source distribution - using full config checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... yes checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ANSI C... none needed checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking for ar... /usr/bin/ar checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabi checking whether your make is GNU make... yes, it is. configure: configured for optional LFS, large file support configure: enabled POSIX multithreading support checking for pthread_setconcurrency... yes checking for pthread_attr_setscope... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for cc_r... arm-linux-gnueabi-gcc checking for ntohs... yes checking for ntohl... yes checking for htons... yes checking for htonl... yes configure: creating ./config.status config.status: creating src/Makefile config.status: creating testsuite/Makefile config.status: creating Makefile config.status: creating src/config.h # avoid duplicated definition of PACKAGE_NAME (basically conflicting with biosquid when used together) sed -i -e '/^#define PACKAGE_NAME /i #ifndef PACKAGE_NAME' \ -e '/^#define PACKAGE_NAME /a #endif' \ -e '/^#define PACKAGE_VERSION /i #ifndef PACKAGE_VERSION' \ -e '/^#define PACKAGE_VERSION /a #endif' \ -e '/^#define _LARGEFILE_SOURCE /i #ifndef _LARGEFILE_SOURCE' \ -e '/^#define _LARGEFILE_SOURCE /a #endif' \ -e '/^#define _LARGEFILE64_SOURCE /i #ifndef _LARGEFILE64_SOURCE' \ -e '/^#define _LARGEFILE64_SOURCE /a #endif' \ -e '/^#define VERSION /i #ifndef VERSION' \ -e '/^#define VERSION /a #endif' \ src/config.h make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make[2]: Entering directory '/<>/src' arm-linux-gnueabi-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -c hmmalign.c Package libsquid was not found in the pkg-config search path. Perhaps you should add the directory containing `libsquid.pc' to the PKG_CONFIG_PATH environment variable Package 'libsquid', required by 'virtual:world', not found hmmalign.c:19:10: fatal error: squidconf.h: No such file or directory 19 | #include "squidconf.h" | ^~~~~~~~~~~~~ compilation terminated. make[2]: *** [Makefile:89: hmmalign.o] Error 1 make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>/src' arm-linux-gnueabi-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -c alphabet.c Package libsquid was not found in the pkg-config search path. Perhaps you should add the directory containing `libsquid.pc' to the PKG_CONFIG_PATH environment variable Package 'libsquid', required by 'virtual:world', not found alphabet.c:17:10: fatal error: squidconf.h: No such file or directory 17 | #include "squidconf.h" | ^~~~~~~~~~~~~ compilation terminated. make[2]: *** [Makefile:89: alphabet.o] Error 1 make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>/testsuite' arm-linux-gnueabi-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -I../src -c alignalign_test.c Package libsquid was not found in the pkg-config search path. Perhaps you should add the directory containing `libsquid.pc' to the PKG_CONFIG_PATH environment variable Package 'libsquid', required by 'virtual:world', not found In file included from alignalign_test.c:27: ../src/structs.h:24:10: fatal error: squid.h: No such file or directory 24 | #include "squid.h" | ^~~~~~~~~ compilation terminated. make[2]: *** [Makefile:43: alignalign_test.o] Error 1 make[2]: Leaving directory '/<>/testsuite' make[1]: *** [Makefile:84: all] Error 2 make[1]: Leaving directory '/<>' dh_auto_build: error: make -j1 returned exit code 2 make: *** [debian/rules:13: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2022-12-05T08:02:34Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 2800 Build-Time: 2 Distribution: unstable Fail-Stage: build Foreign Architectures: armel Host Architecture: armel Install-Time: 11 Job: hmmer2_2.3.2+dfsg-7 Machine Architecture: amd64 Package: hmmer2 Package-Time: 23 Source-Version: 2.3.2+dfsg-7 Space: 2800 Status: attempted Version: 2.3.2+dfsg-7 -------------------------------------------------------------------------------- Finished at 2022-12-05T08:02:34Z Build needed 00:00:23, 2800k disk space