sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | htslib 1.22.1+ds-1 (riscv64) Tue, 19 Aug 2025 12:44:45 +0000 | +==============================================================================+ Package: htslib Version: 1.22.1+ds-1 Source Version: 1.22.1+ds-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: riscv64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-b26183b7-c8b4-4926-9631-ecefb82d8b5f' with '<>' I: NOTICE: Log filtering will replace 'build/htslib-eqEKX4/resolver-5f4RiA' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [216 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian unstable/main Sources T-2025-08-19-0805.52-F-2025-08-19-0209.55.pdiff [29.6 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2025-08-19-0805.52-F-2025-08-19-0209.55.pdiff [40.8 kB] Get:4 http://localhost:3142/debian unstable/main Sources T-2025-08-19-0805.52-F-2025-08-19-0209.55.pdiff [29.6 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages T-2025-08-19-0805.52-F-2025-08-19-0209.55.pdiff [40.8 kB] Get:6 http://localhost:3142/debian unstable/main riscv64 Packages [9783 kB] Fetched 10.2 MB in 3s (3920 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'htslib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/htslib.git Please use: git clone https://salsa.debian.org/med-team/htslib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1647 kB of source archives. Get:1 http://localhost:3142/debian unstable/main htslib 1.22.1+ds-1 (dsc) [2479 B] Get:2 http://localhost:3142/debian unstable/main htslib 1.22.1+ds-1 (tar) [1623 kB] Get:3 http://localhost:3142/debian unstable/main htslib 1.22.1+ds-1 (diff) [21.5 kB] Fetched 1647 kB in 0s (109 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/htslib-eqEKX4/htslib-1.22.1+ds' with '<>' I: NOTICE: Log filtering will replace 'build/htslib-eqEKX4' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev (>= 1.0), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev (>= 1.0), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [855 B] Get:5 copy:/<>/apt_archive ./ Packages [900 B] Fetched 2364 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu bsdextrautils comerr-dev:riscv64 cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-15-base:riscv64 gcc-15-cross-base gcc-riscv64-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:riscv64 libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libbrotli-dev:riscv64 libbrotli1:riscv64 libbz2-1.0:riscv64 libbz2-dev:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcurl3t64-gnutls:riscv64 libcurl4-gnutls-dev:riscv64 libdb5.3t64:riscv64 libdebhelper-perl libdeflate-dev:riscv64 libdeflate0:riscv64 libelf1t64 libevent-2.1-7t64:riscv64 libfakeroot libffi8:riscv64 libfile-stripnondeterminism-perl libgcc-14-dev-riscv64-cross libgcc-15-dev:riscv64 libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgmp-dev:riscv64 libgmp10:riscv64 libgmpxx4ldbl:riscv64 libgnutls-dane0t64:riscv64 libgnutls-openssl27t64:riscv64 libgnutls28-dev:riscv64 libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross libgssapi-krb5-2:riscv64 libgssrpc4t64:riscv64 libhogweed6t64:riscv64 libhtscodecs-dev:riscv64 libhtscodecs2:riscv64 libidn2-0:riscv64 libidn2-dev:riscv64 libitm1:riscv64 libitm1-riscv64-cross libk5crypto3:riscv64 libkadm5clnt-mit12:riscv64 libkadm5srv-mit12:riscv64 libkdb5-10t64:riscv64 libkeyutils1:riscv64 libkrb5-3:riscv64 libkrb5-dev:riscv64 libkrb5support0:riscv64 libldap-dev:riscv64 libldap2:riscv64 liblsan0:riscv64 liblsan0-riscv64-cross liblzma-dev:riscv64 liblzma5:riscv64 libmagic-mgc libmagic1t64 libnettle8t64:riscv64 libnghttp2-14:riscv64 libnghttp2-dev:riscv64 libnghttp3-9:riscv64 libnghttp3-dev:riscv64 libngtcp2-16:riscv64 libngtcp2-crypto-gnutls-dev:riscv64 libngtcp2-crypto-gnutls8:riscv64 libngtcp2-dev:riscv64 libp11-kit-dev:riscv64 libp11-kit0:riscv64 libpipeline1 libpkgconf3 libpsl-dev:riscv64 libpsl5t64:riscv64 librtmp-dev:riscv64 librtmp1:riscv64 libsasl2-2:riscv64 libsasl2-modules-db:riscv64 libssh2-1-dev:riscv64 libssh2-1t64:riscv64 libssl-dev:riscv64 libssl3t64:riscv64 libstdc++-14-dev-riscv64-cross libstdc++-15-dev:riscv64 libstdc++6:riscv64 libstdc++6-riscv64-cross libtasn1-6:riscv64 libtasn1-6-dev:riscv64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunbound8:riscv64 libunistring5 libunistring5:riscv64 libxml2-16 libzstd-dev:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db nettle-dev:riscv64 pkgconf:riscv64 pkgconf-bin po-debconf sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc doc-base:riscv64 gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-riscv64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff krb5-doc:riscv64 glibc-doc:riscv64 libc-l10n:riscv64 locales:riscv64 libnss-nis:riscv64 libnss-nisplus:riscv64 manpages-dev:riscv64 libcurl4-doc:riscv64 libidn-dev:riscv64 gmp-doc:riscv64 libgmp10-doc:riscv64 libmpfr-dev:riscv64 dns-root-data:riscv64 gnutls-bin:riscv64 gnutls-doc:riscv64 krb5-user:riscv64 liblzma-doc:riscv64 libnghttp2-doc:riscv64 p11-kit-doc:riscv64 libssl-doc:riscv64 libstdc++-15-doc:riscv64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:riscv64 ca-certificates:riscv64 libarchive-cpio-perl krb5-locales:riscv64 libldap-common:riscv64 publicsuffix:riscv64 libsasl2-modules:riscv64 libtasn1-doc:riscv64 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu bsdextrautils comerr-dev:riscv64 cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-15-base:riscv64 gcc-15-cross-base gcc-riscv64-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:riscv64 libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libbrotli-dev:riscv64 libbrotli1:riscv64 libbz2-1.0:riscv64 libbz2-dev:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcurl3t64-gnutls:riscv64 libcurl4-gnutls-dev:riscv64 libdb5.3t64:riscv64 libdebhelper-perl libdeflate-dev:riscv64 libdeflate0:riscv64 libelf1t64 libevent-2.1-7t64:riscv64 libfakeroot libffi8:riscv64 libfile-stripnondeterminism-perl libgcc-14-dev-riscv64-cross libgcc-15-dev:riscv64 libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgmp-dev:riscv64 libgmp10:riscv64 libgmpxx4ldbl:riscv64 libgnutls-dane0t64:riscv64 libgnutls-openssl27t64:riscv64 libgnutls28-dev:riscv64 libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross libgssapi-krb5-2:riscv64 libgssrpc4t64:riscv64 libhogweed6t64:riscv64 libhtscodecs-dev:riscv64 libhtscodecs2:riscv64 libidn2-0:riscv64 libidn2-dev:riscv64 libitm1:riscv64 libitm1-riscv64-cross libk5crypto3:riscv64 libkadm5clnt-mit12:riscv64 libkadm5srv-mit12:riscv64 libkdb5-10t64:riscv64 libkeyutils1:riscv64 libkrb5-3:riscv64 libkrb5-dev:riscv64 libkrb5support0:riscv64 libldap-dev:riscv64 libldap2:riscv64 liblsan0:riscv64 liblsan0-riscv64-cross liblzma-dev:riscv64 liblzma5:riscv64 libmagic-mgc libmagic1t64 libnettle8t64:riscv64 libnghttp2-14:riscv64 libnghttp2-dev:riscv64 libnghttp3-9:riscv64 libnghttp3-dev:riscv64 libngtcp2-16:riscv64 libngtcp2-crypto-gnutls-dev:riscv64 libngtcp2-crypto-gnutls8:riscv64 libngtcp2-dev:riscv64 libp11-kit-dev:riscv64 libp11-kit0:riscv64 libpipeline1 libpkgconf3 libpsl-dev:riscv64 libpsl5t64:riscv64 librtmp-dev:riscv64 librtmp1:riscv64 libsasl2-2:riscv64 libsasl2-modules-db:riscv64 libssh2-1-dev:riscv64 libssh2-1t64:riscv64 libssl-dev:riscv64 libssl3t64:riscv64 libstdc++-14-dev-riscv64-cross libstdc++-15-dev:riscv64 libstdc++6:riscv64 libstdc++6-riscv64-cross libtasn1-6:riscv64 libtasn1-6-dev:riscv64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunbound8:riscv64 libunistring5 libunistring5:riscv64 libxml2-16 libzstd-dev:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db nettle-dev:riscv64 pkgconf:riscv64 pkgconf-bin po-debconf sbuild-build-depends-main-dummy:riscv64 sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 0 upgraded, 146 newly installed, 0 to remove and 0 not upgraded. Need to get 154 MB of archives. After this operation, 845 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [980 B] Get:2 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:5 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:6 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:8 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get:9 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41.1-1 [94.7 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get:12 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:13 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:15 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:16 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get:17 http://localhost:3142/debian unstable/main amd64 binutils-riscv64-linux-gnu amd64 2.45-4 [1467 kB] Get:18 http://localhost:3142/debian unstable/main riscv64 gcc-15-base riscv64 15.2.0-1 [52.0 kB] Get:19 http://localhost:3142/debian unstable/main riscv64 libgcc-s1 riscv64 15.2.0-1 [61.5 kB] Get:20 http://localhost:3142/debian unstable/main riscv64 libc6 riscv64 2.41-12 [2472 kB] Get:21 http://localhost:3142/debian unstable/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB] Get:22 http://localhost:3142/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB] Get:23 http://localhost:3142/debian unstable/main riscv64 libc6-dev riscv64 2.41-12 [3127 kB] Get:24 http://localhost:3142/debian unstable/main riscv64 libcom-err2 riscv64 1.47.2-3+b3 [24.7 kB] Get:25 http://localhost:3142/debian unstable/main riscv64 comerr-dev riscv64 2.1-1.47.2-3+b3 [60.1 kB] Get:26 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu-base amd64 14.3.0-5cross3 [51.8 kB] Get:27 http://localhost:3142/debian unstable/main amd64 cpp-14-riscv64-linux-gnu amd64 14.3.0-5cross3 [13.3 MB] Get:28 http://localhost:3142/debian unstable/main amd64 cpp-riscv64-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:29 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.3.0-5cross3 [47.0 kB] Get:30 http://localhost:3142/debian unstable/main amd64 gcc-15-cross-base all 15.2.0-1cross1 [47.6 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libc6-riscv64-cross all 2.41-11cross1 [1170 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libgcc-s1-riscv64-cross all 15.2.0-1cross1 [61.6 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libgomp1-riscv64-cross all 15.2.0-1cross1 [129 kB] Get:34 http://localhost:3142/debian unstable/main amd64 libitm1-riscv64-cross all 15.2.0-1cross1 [24.9 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libatomic1-riscv64-cross all 15.2.0-1cross1 [8232 B] Get:36 http://localhost:3142/debian unstable/main amd64 libasan8-riscv64-cross all 15.2.0-1cross1 [2928 kB] Get:37 http://localhost:3142/debian unstable/main amd64 liblsan0-riscv64-cross all 15.2.0-1cross1 [1325 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libtsan2-riscv64-cross all 15.2.0-1cross1 [2641 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libstdc++6-riscv64-cross all 15.2.0-1cross1 [665 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libubsan1-riscv64-cross all 15.2.0-1cross1 [1176 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-riscv64-cross all 14.3.0-5cross3 [5167 kB] Get:42 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu amd64 14.3.0-5cross3 [25.9 MB] Get:43 http://localhost:3142/debian unstable/main amd64 gcc-riscv64-linux-gnu amd64 4:14.2.0-1 [1444 B] Get:44 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-riscv64-cross all 6.12.38-1cross1 [2440 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libc6-dev-riscv64-cross all 2.41-11cross1 [3121 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-riscv64-cross all 14.3.0-5cross3 [5518 kB] Get:47 http://localhost:3142/debian unstable/main amd64 g++-14-riscv64-linux-gnu amd64 14.3.0-5cross3 [14.3 MB] Get:48 http://localhost:3142/debian unstable/main amd64 g++-riscv64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:49 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-riscv64 all 12.12 [3544 B] Get:50 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.25 [91.6 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:52 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:55 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:56 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:57 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.1 [640 kB] Get:60 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get:61 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:62 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:63 http://localhost:3142/debian unstable/main amd64 debhelper all 13.25 [937 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.2-1 [29.7 kB] Get:65 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.2-1 [76.0 kB] Get:66 http://localhost:3142/debian unstable/main riscv64 libkrb5support0 riscv64 1.21.3-5 [34.0 kB] Get:67 http://localhost:3142/debian unstable/main riscv64 libk5crypto3 riscv64 1.21.3-5 [100 kB] Get:68 http://localhost:3142/debian unstable/main riscv64 libkeyutils1 riscv64 1.6.3-6 [9480 B] Get:69 http://localhost:3142/debian unstable/main riscv64 libzstd1 riscv64 1.5.7+dfsg-1 [360 kB] Get:70 http://localhost:3142/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Get:71 http://localhost:3142/debian unstable/main riscv64 libssl3t64 riscv64 3.5.2-1 [2222 kB] Get:72 http://localhost:3142/debian unstable/main riscv64 libkrb5-3 riscv64 1.21.3-5 [334 kB] Get:73 http://localhost:3142/debian unstable/main riscv64 libgssapi-krb5-2 riscv64 1.21.3-5 [143 kB] Get:74 http://localhost:3142/debian unstable/main riscv64 libgssrpc4t64 riscv64 1.21.3-5 [60.7 kB] Get:75 http://localhost:3142/debian unstable/main riscv64 libkadm5clnt-mit12 riscv64 1.21.3-5 [42.2 kB] Get:76 http://localhost:3142/debian unstable/main riscv64 libkdb5-10t64 riscv64 1.21.3-5 [43.4 kB] Get:77 http://localhost:3142/debian unstable/main riscv64 libkadm5srv-mit12 riscv64 1.21.3-5 [54.9 kB] Get:78 http://localhost:3142/debian unstable/main riscv64 krb5-multidev riscv64 1.21.3-5 [126 kB] Get:79 http://localhost:3142/debian unstable/main riscv64 libasan8 riscv64 15.2.0-1 [2938 kB] Get:80 http://localhost:3142/debian unstable/main riscv64 libatomic1 riscv64 15.2.0-1 [8528 B] Get:81 http://localhost:3142/debian unstable/main riscv64 libbrotli1 riscv64 1.1.0-2+b7 [358 kB] Get:82 http://localhost:3142/debian unstable/main riscv64 libbrotli-dev riscv64 1.1.0-2+b7 [798 kB] Get:83 http://localhost:3142/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB] Get:84 http://localhost:3142/debian unstable/main riscv64 libbz2-dev riscv64 1.0.8-6 [69.9 kB] Get:85 http://localhost:3142/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-3 [558 kB] Get:86 http://localhost:3142/debian unstable/main riscv64 libnettle8t64 riscv64 3.10.1-1 [335 kB] Get:87 http://localhost:3142/debian unstable/main riscv64 libhogweed6t64 riscv64 3.10.1-1 [336 kB] Get:88 http://localhost:3142/debian unstable/main riscv64 libunistring5 riscv64 1.3-2 [474 kB] Get:89 http://localhost:3142/debian unstable/main riscv64 libidn2-0 riscv64 2.3.8-3 [109 kB] Get:90 http://localhost:3142/debian unstable/main riscv64 libffi8 riscv64 3.4.8-2 [21.7 kB] Get:91 http://localhost:3142/debian unstable/main riscv64 libp11-kit0 riscv64 0.25.5-3 [444 kB] Get:92 http://localhost:3142/debian unstable/main riscv64 libtasn1-6 riscv64 4.20.0-2 [50.6 kB] Get:93 http://localhost:3142/debian unstable/main riscv64 libgnutls30t64 riscv64 3.8.10-2 [1463 kB] Get:94 http://localhost:3142/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-9 [716 kB] Get:95 http://localhost:3142/debian unstable/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-9 [20.5 kB] Get:96 http://localhost:3142/debian unstable/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-9 [60.9 kB] Get:97 http://localhost:3142/debian unstable/main riscv64 libldap2 riscv64 2.6.10+dfsg-1 [197 kB] Get:98 http://localhost:3142/debian unstable/main riscv64 libnghttp2-14 riscv64 1.64.0-1.1+b1 [78.1 kB] Get:99 http://localhost:3142/debian unstable/main riscv64 libnghttp3-9 riscv64 1.8.0-1 [68.5 kB] Get:100 http://localhost:3142/debian unstable/main riscv64 libngtcp2-16 riscv64 1.11.0-1 [136 kB] Get:101 http://localhost:3142/debian unstable/main riscv64 libngtcp2-crypto-gnutls8 riscv64 1.11.0-1 [29.8 kB] Get:102 http://localhost:3142/debian unstable/main riscv64 libpsl5t64 riscv64 0.21.2-1.1+b1 [57.3 kB] Get:103 http://localhost:3142/debian unstable/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-2+b5 [59.0 kB] Get:104 http://localhost:3142/debian unstable/main riscv64 libssh2-1t64 riscv64 1.11.1-1 [249 kB] Get:105 http://localhost:3142/debian unstable/main riscv64 libcurl3t64-gnutls riscv64 8.15.0-1 [392 kB] Get:106 http://localhost:3142/debian unstable/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b1 [182 kB] Get:107 http://localhost:3142/debian unstable/main riscv64 libunbound8 riscv64 1.22.0-2 [605 kB] Get:108 http://localhost:3142/debian unstable/main riscv64 libgnutls-dane0t64 riscv64 3.8.10-2 [456 kB] Get:109 http://localhost:3142/debian unstable/main riscv64 libgnutls-openssl27t64 riscv64 3.8.10-2 [456 kB] Get:110 http://localhost:3142/debian unstable/main riscv64 libidn2-dev riscv64 2.3.8-3 [135 kB] Get:111 http://localhost:3142/debian unstable/main riscv64 libp11-kit-dev riscv64 0.25.5-3 [208 kB] Get:112 http://localhost:3142/debian unstable/main riscv64 libtasn1-6-dev riscv64 4.20.0-2 [149 kB] Get:113 http://localhost:3142/debian unstable/main riscv64 libstdc++6 riscv64 15.2.0-1 [714 kB] Get:114 http://localhost:3142/debian unstable/main riscv64 libgmpxx4ldbl riscv64 2:6.3.0+dfsg-3 [329 kB] Get:115 http://localhost:3142/debian unstable/main riscv64 libgmp-dev riscv64 2:6.3.0+dfsg-3 [1024 kB] Get:116 http://localhost:3142/debian unstable/main riscv64 nettle-dev riscv64 3.10.1-1 [1523 kB] Get:117 http://localhost:3142/debian unstable/main riscv64 libgnutls28-dev riscv64 3.8.10-2 [2648 kB] Get:118 http://localhost:3142/debian unstable/main riscv64 libkrb5-dev riscv64 1.21.3-5 [16.1 kB] Get:119 http://localhost:3142/debian unstable/main riscv64 libldap-dev riscv64 2.6.10+dfsg-1 [584 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:121 http://localhost:3142/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:122 http://localhost:3142/debian unstable/main riscv64 pkgconf riscv64 1.8.1-4 [26.1 kB] Get:123 http://localhost:3142/debian unstable/main riscv64 libnghttp2-dev riscv64 1.64.0-1.1+b1 [220 kB] Get:124 http://localhost:3142/debian unstable/main riscv64 libnghttp3-dev riscv64 1.8.0-1 [175 kB] Get:125 http://localhost:3142/debian unstable/main riscv64 libngtcp2-crypto-gnutls-dev riscv64 1.11.0-1 [48.5 kB] Get:126 http://localhost:3142/debian unstable/main riscv64 libngtcp2-dev riscv64 1.11.0-1 [371 kB] Get:127 http://localhost:3142/debian unstable/main riscv64 libpsl-dev riscv64 0.21.2-1.1+b1 [87.2 kB] Get:128 http://localhost:3142/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Get:129 http://localhost:3142/debian unstable/main riscv64 librtmp-dev riscv64 2.4+20151223.gitfa8646d.1-2+b5 [118 kB] Get:130 http://localhost:3142/debian unstable/main riscv64 libssl-dev riscv64 3.5.2-1 [5795 kB] Get:131 http://localhost:3142/debian unstable/main riscv64 libssh2-1-dev riscv64 1.11.1-1 [560 kB] Get:132 http://localhost:3142/debian unstable/main riscv64 libzstd-dev riscv64 1.5.7+dfsg-1 [1392 kB] Get:133 http://localhost:3142/debian unstable/main riscv64 libcurl4-gnutls-dev riscv64 8.15.0-1 [1145 kB] Get:134 http://localhost:3142/debian unstable/main riscv64 libdeflate0 riscv64 1.23-2 [38.8 kB] Get:135 http://localhost:3142/debian unstable/main riscv64 libdeflate-dev riscv64 1.23-2 [80.1 kB] Get:136 http://localhost:3142/debian unstable/main riscv64 libgomp1 riscv64 15.2.0-1 [132 kB] Get:137 http://localhost:3142/debian unstable/main riscv64 libitm1 riscv64 15.2.0-1 [25.4 kB] Get:138 http://localhost:3142/debian unstable/main riscv64 liblsan0 riscv64 15.2.0-1 [1326 kB] Get:139 http://localhost:3142/debian unstable/main riscv64 libtsan2 riscv64 15.2.0-1 [2653 kB] Get:140 http://localhost:3142/debian unstable/main riscv64 libubsan1 riscv64 15.2.0-1 [1178 kB] Get:141 http://localhost:3142/debian unstable/main riscv64 libgcc-15-dev riscv64 15.2.0-1 [5692 kB] Get:142 http://localhost:3142/debian unstable/main riscv64 libhtscodecs2 riscv64 1.6.1-2 [74.7 kB] Get:143 http://localhost:3142/debian unstable/main riscv64 libhtscodecs-dev riscv64 1.6.1-2 [3085 kB] Get:144 http://localhost:3142/debian unstable/main riscv64 liblzma5 riscv64 5.8.1-1 [313 kB] Get:145 http://localhost:3142/debian unstable/main riscv64 liblzma-dev riscv64 5.8.1-1 [476 kB] Get:146 http://localhost:3142/debian unstable/main riscv64 libstdc++-15-dev riscv64 15.2.0-1 [6144 kB] Preconfiguring packages ... Fetched 154 MB in 1s (209 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 12895 files and directories currently installed.) Preparing to unpack .../000-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../001-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../002-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../003-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../004-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. 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Selecting previously unselected package libc6:riscv64. Preparing to unpack .../018-libc6_2.41-12_riscv64.deb ... Unpacking libc6:riscv64 (2.41-12) ... Selecting previously unselected package libcrypt1:riscv64. Preparing to unpack .../019-libcrypt1_1%3a4.4.38-1_riscv64.deb ... Unpacking libcrypt1:riscv64 (1:4.4.38-1) ... Selecting previously unselected package libcrypt-dev:riscv64. Preparing to unpack .../020-libcrypt-dev_1%3a4.4.38-1_riscv64.deb ... Unpacking libcrypt-dev:riscv64 (1:4.4.38-1) ... Selecting previously unselected package libc6-dev:riscv64. Preparing to unpack .../021-libc6-dev_2.41-12_riscv64.deb ... Unpacking libc6-dev:riscv64 (2.41-12) ... Selecting previously unselected package libcom-err2:riscv64. Preparing to unpack .../022-libcom-err2_1.47.2-3+b3_riscv64.deb ... Unpacking libcom-err2:riscv64 (1.47.2-3+b3) ... Selecting previously unselected package comerr-dev:riscv64. Preparing to unpack .../023-comerr-dev_2.1-1.47.2-3+b3_riscv64.deb ... Unpacking comerr-dev:riscv64 (2.1-1.47.2-3+b3) ... Selecting previously unselected package gcc-14-riscv64-linux-gnu-base:amd64. Preparing to unpack .../024-gcc-14-riscv64-linux-gnu-base_14.3.0-5cross3_amd64.deb ... Unpacking gcc-14-riscv64-linux-gnu-base:amd64 (14.3.0-5cross3) ... Selecting previously unselected package cpp-14-riscv64-linux-gnu. Preparing to unpack .../025-cpp-14-riscv64-linux-gnu_14.3.0-5cross3_amd64.deb ... Unpacking cpp-14-riscv64-linux-gnu (14.3.0-5cross3) ... Selecting previously unselected package cpp-riscv64-linux-gnu. Preparing to unpack .../026-cpp-riscv64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking cpp-riscv64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../027-gcc-14-cross-base_14.3.0-5cross3_all.deb ... Unpacking gcc-14-cross-base (14.3.0-5cross3) ... Selecting previously unselected package gcc-15-cross-base. Preparing to unpack .../028-gcc-15-cross-base_15.2.0-1cross1_all.deb ... Unpacking gcc-15-cross-base (15.2.0-1cross1) ... Selecting previously unselected package libc6-riscv64-cross. Preparing to unpack .../029-libc6-riscv64-cross_2.41-11cross1_all.deb ... Unpacking libc6-riscv64-cross (2.41-11cross1) ... Selecting previously unselected package libgcc-s1-riscv64-cross. Preparing to unpack .../030-libgcc-s1-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libgcc-s1-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libgomp1-riscv64-cross. Preparing to unpack .../031-libgomp1-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libgomp1-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libitm1-riscv64-cross. Preparing to unpack .../032-libitm1-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libitm1-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libatomic1-riscv64-cross. Preparing to unpack .../033-libatomic1-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libatomic1-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libasan8-riscv64-cross. Preparing to unpack .../034-libasan8-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libasan8-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package liblsan0-riscv64-cross. Preparing to unpack .../035-liblsan0-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking liblsan0-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libtsan2-riscv64-cross. Preparing to unpack .../036-libtsan2-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libtsan2-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libstdc++6-riscv64-cross. Preparing to unpack .../037-libstdc++6-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libstdc++6-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libubsan1-riscv64-cross. Preparing to unpack .../038-libubsan1-riscv64-cross_15.2.0-1cross1_all.deb ... Unpacking libubsan1-riscv64-cross (15.2.0-1cross1) ... Selecting previously unselected package libgcc-14-dev-riscv64-cross. Preparing to unpack .../039-libgcc-14-dev-riscv64-cross_14.3.0-5cross3_all.deb ... Unpacking libgcc-14-dev-riscv64-cross (14.3.0-5cross3) ... Selecting previously unselected package gcc-14-riscv64-linux-gnu. Preparing to unpack .../040-gcc-14-riscv64-linux-gnu_14.3.0-5cross3_amd64.deb ... Unpacking gcc-14-riscv64-linux-gnu (14.3.0-5cross3) ... Selecting previously unselected package gcc-riscv64-linux-gnu. Preparing to unpack .../041-gcc-riscv64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking gcc-riscv64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package linux-libc-dev-riscv64-cross. Preparing to unpack .../042-linux-libc-dev-riscv64-cross_6.12.38-1cross1_all.deb ... Unpacking linux-libc-dev-riscv64-cross (6.12.38-1cross1) ... Selecting previously unselected package libc6-dev-riscv64-cross. 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Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../054-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../055-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../056-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../057-libxml2-16_2.14.5+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.5+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../058-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../059-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../060-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../061-debhelper_13.25_all.deb ... Unpacking debhelper (13.25) ... Selecting previously unselected package libfakeroot:amd64. Preparing to unpack .../062-libfakeroot_1.37.1.2-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.37.1.2-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../063-fakeroot_1.37.1.2-1_amd64.deb ... Unpacking fakeroot (1.37.1.2-1) ... Selecting previously unselected package libkrb5support0:riscv64. Preparing to unpack .../064-libkrb5support0_1.21.3-5_riscv64.deb ... Unpacking libkrb5support0:riscv64 (1.21.3-5) ... Selecting previously unselected package libk5crypto3:riscv64. Preparing to unpack .../065-libk5crypto3_1.21.3-5_riscv64.deb ... Unpacking libk5crypto3:riscv64 (1.21.3-5) ... 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Unpacking krb5-multidev:riscv64 (1.21.3-5) ... Selecting previously unselected package libasan8:riscv64. Preparing to unpack .../077-libasan8_15.2.0-1_riscv64.deb ... Unpacking libasan8:riscv64 (15.2.0-1) ... Selecting previously unselected package libatomic1:riscv64. Preparing to unpack .../078-libatomic1_15.2.0-1_riscv64.deb ... Unpacking libatomic1:riscv64 (15.2.0-1) ... Selecting previously unselected package libbrotli1:riscv64. Preparing to unpack .../079-libbrotli1_1.1.0-2+b7_riscv64.deb ... Unpacking libbrotli1:riscv64 (1.1.0-2+b7) ... Selecting previously unselected package libbrotli-dev:riscv64. Preparing to unpack .../080-libbrotli-dev_1.1.0-2+b7_riscv64.deb ... Unpacking libbrotli-dev:riscv64 (1.1.0-2+b7) ... Selecting previously unselected package libbz2-1.0:riscv64. Preparing to unpack .../081-libbz2-1.0_1.0.8-6_riscv64.deb ... Unpacking libbz2-1.0:riscv64 (1.0.8-6) ... Selecting previously unselected package libbz2-dev:riscv64. 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Unpacking libngtcp2-16:riscv64 (1.11.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:riscv64. Preparing to unpack .../099-libngtcp2-crypto-gnutls8_1.11.0-1_riscv64.deb ... Unpacking libngtcp2-crypto-gnutls8:riscv64 (1.11.0-1) ... Selecting previously unselected package libpsl5t64:riscv64. Preparing to unpack .../100-libpsl5t64_0.21.2-1.1+b1_riscv64.deb ... Unpacking libpsl5t64:riscv64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:riscv64. Preparing to unpack .../101-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_riscv64.deb ... Unpacking librtmp1:riscv64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:riscv64. Preparing to unpack .../102-libssh2-1t64_1.11.1-1_riscv64.deb ... Unpacking libssh2-1t64:riscv64 (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:riscv64. Preparing to unpack .../103-libcurl3t64-gnutls_8.15.0-1_riscv64.deb ... Unpacking libcurl3t64-gnutls:riscv64 (8.15.0-1) ... Selecting previously unselected package libevent-2.1-7t64:riscv64. Preparing to unpack .../104-libevent-2.1-7t64_2.1.12-stable-10+b1_riscv64.deb ... Unpacking libevent-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Selecting previously unselected package libunbound8:riscv64. Preparing to unpack .../105-libunbound8_1.22.0-2_riscv64.deb ... Unpacking libunbound8:riscv64 (1.22.0-2) ... Selecting previously unselected package libgnutls-dane0t64:riscv64. Preparing to unpack .../106-libgnutls-dane0t64_3.8.10-2_riscv64.deb ... Unpacking libgnutls-dane0t64:riscv64 (3.8.10-2) ... Selecting previously unselected package libgnutls-openssl27t64:riscv64. Preparing to unpack .../107-libgnutls-openssl27t64_3.8.10-2_riscv64.deb ... Unpacking libgnutls-openssl27t64:riscv64 (3.8.10-2) ... Selecting previously unselected package libidn2-dev:riscv64. Preparing to unpack .../108-libidn2-dev_2.3.8-3_riscv64.deb ... Unpacking libidn2-dev:riscv64 (2.3.8-3) ... Selecting previously unselected package libp11-kit-dev:riscv64. Preparing to unpack .../109-libp11-kit-dev_0.25.5-3_riscv64.deb ... Unpacking libp11-kit-dev:riscv64 (0.25.5-3) ... Selecting previously unselected package libtasn1-6-dev:riscv64. Preparing to unpack .../110-libtasn1-6-dev_4.20.0-2_riscv64.deb ... Unpacking libtasn1-6-dev:riscv64 (4.20.0-2) ... Selecting previously unselected package libstdc++6:riscv64. Preparing to unpack .../111-libstdc++6_15.2.0-1_riscv64.deb ... Unpacking libstdc++6:riscv64 (15.2.0-1) ... Selecting previously unselected package libgmpxx4ldbl:riscv64. Preparing to unpack .../112-libgmpxx4ldbl_2%3a6.3.0+dfsg-3_riscv64.deb ... Unpacking libgmpxx4ldbl:riscv64 (2:6.3.0+dfsg-3) ... Selecting previously unselected package libgmp-dev:riscv64. Preparing to unpack .../113-libgmp-dev_2%3a6.3.0+dfsg-3_riscv64.deb ... Unpacking libgmp-dev:riscv64 (2:6.3.0+dfsg-3) ... Selecting previously unselected package nettle-dev:riscv64. 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Unpacking libhtscodecs-dev:riscv64 (1.6.1-2) ... Selecting previously unselected package liblzma5:riscv64. Preparing to unpack .../142-liblzma5_5.8.1-1_riscv64.deb ... Unpacking liblzma5:riscv64 (5.8.1-1) ... Selecting previously unselected package liblzma-dev:riscv64. Preparing to unpack .../143-liblzma-dev_5.8.1-1_riscv64.deb ... Unpacking liblzma-dev:riscv64 (5.8.1-1) ... Selecting previously unselected package libstdc++-15-dev:riscv64. Preparing to unpack .../144-libstdc++-15-dev_15.2.0-1_riscv64.deb ... Unpacking libstdc++-15-dev:riscv64 (15.2.0-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:riscv64. Preparing to unpack .../145-sbuild-build-depends-main-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.1-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.1) ... Setting up libdebhelper-perl (13.25) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up binutils-riscv64-linux-gnu (2.45-4) ... Setting up m4 (1.4.19-8) ... Setting up gcc-14-cross-base (14.3.0-5cross3) ... Setting up file (1:5.46-5) ... Setting up libfakeroot:amd64 (1.37.1.2-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37.1.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up gcc-14-riscv64-linux-gnu-base:amd64 (14.3.0-5cross3) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up linux-libc-dev-riscv64-cross (6.12.38-1cross1) ... Setting up libc6-riscv64-cross (2.41-11cross1) ... Setting up gcc-15-cross-base (15.2.0-1cross1) ... Setting up libatomic1-riscv64-cross (15.2.0-1cross1) ... Setting up gcc-15-base:riscv64 (15.2.0-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-4) ... Setting up libitm1-riscv64-cross (15.2.0-1cross1) ... Setting up cpp-14-riscv64-linux-gnu (14.3.0-5cross3) ... Setting up pkgconf:riscv64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgcc-s1-riscv64-cross (15.2.0-1cross1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libc6-dev-riscv64-cross (2.41-11cross1) ... Setting up libasan8-riscv64-cross (15.2.0-1cross1) ... Setting up libgomp1-riscv64-cross (15.2.0-1cross1) ... Setting up cpp-riscv64-linux-gnu (4:14.2.0-1) ... Setting up libstdc++6-riscv64-cross (15.2.0-1cross1) ... Setting up libubsan1-riscv64-cross (15.2.0-1cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up liblsan0-riscv64-cross (15.2.0-1cross1) ... Setting up libtsan2-riscv64-cross (15.2.0-1cross1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-riscv64-cross (14.3.0-5cross3) ... Setting up libstdc++-14-dev-riscv64-cross (14.3.0-5cross3) ... Setting up debhelper (13.25) ... Setting up gcc-14-riscv64-linux-gnu (14.3.0-5cross3) ... Setting up g++-14-riscv64-linux-gnu (14.3.0-5cross3) ... Setting up gcc-riscv64-linux-gnu (4:14.2.0-1) ... Setting up g++-riscv64-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-riscv64 (12.12) ... Setting up libgcc-s1:riscv64 (15.2.0-1) ... Setting up libc6:riscv64 (2.41-12) ... Setting up libnghttp3-9:riscv64 (1.8.0-1) ... Setting up libnghttp3-dev:riscv64 (1.8.0-1) ... Setting up libdb5.3t64:riscv64 (5.3.28+dfsg2-9) ... Setting up libffi8:riscv64 (3.4.8-2) ... Setting up libasan8:riscv64 (15.2.0-1) ... Setting up libtasn1-6:riscv64 (4.20.0-2) ... Setting up libngtcp2-16:riscv64 (1.11.0-1) ... Setting up libtsan2:riscv64 (15.2.0-1) ... Setting up libbz2-1.0:riscv64 (1.0.8-6) ... Setting up libtasn1-6-dev:riscv64 (4.20.0-2) ... Setting up libstdc++6:riscv64 (15.2.0-1) ... Setting up liblsan0:riscv64 (15.2.0-1) ... Setting up libitm1:riscv64 (15.2.0-1) ... Setting up libhtscodecs2:riscv64 (1.6.1-2) ... Setting up libzstd1:riscv64 (1.5.7+dfsg-1) ... Setting up libkeyutils1:riscv64 (1.6.3-6) ... Setting up libzstd-dev:riscv64 (1.5.7+dfsg-1) ... Setting up liblzma5:riscv64 (5.8.1-1) ... Setting up libbrotli1:riscv64 (1.1.0-2+b7) ... Setting up libnghttp2-14:riscv64 (1.64.0-1.1+b1) ... Setting up libdeflate0:riscv64 (1.23-2) ... Setting up libevent-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up zlib1g:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:riscv64 (1:4.4.38-1) ... Setting up libcom-err2:riscv64 (1.47.2-3+b3) ... Setting up libngtcp2-dev:riscv64 (1.11.0-1) ... Setting up libgomp1:riscv64 (15.2.0-1) ... Setting up libkrb5support0:riscv64 (1.21.3-5) ... Setting up libsasl2-modules-db:riscv64 (2.1.28+dfsg1-9) ... Setting up libhtscodecs-dev:riscv64 (1.6.1-2) ... Setting up libnettle8t64:riscv64 (3.10.1-1) ... Setting up libgmp10:riscv64 (2:6.3.0+dfsg-3) ... Setting up libp11-kit0:riscv64 (0.25.5-3) ... Setting up libunistring5:riscv64 (1.3-2) ... Setting up libatomic1:riscv64 (15.2.0-1) ... Setting up libk5crypto3:riscv64 (1.21.3-5) ... Setting up liblzma-dev:riscv64 (5.8.1-1) ... Setting up libubsan1:riscv64 (15.2.0-1) ... Setting up libhogweed6t64:riscv64 (3.10.1-1) ... Setting up libcrypt-dev:riscv64 (1:4.4.38-1) ... Setting up libc6-dev:riscv64 (2.41-12) ... Setting up libdeflate-dev:riscv64 (1.23-2) ... Setting up libbrotli-dev:riscv64 (1.1.0-2+b7) ... Setting up libp11-kit-dev:riscv64 (0.25.5-3) ... Setting up libbz2-dev:riscv64 (1.0.8-6) ... Setting up libnghttp2-dev:riscv64 (1.64.0-1.1+b1) ... Setting up libgcc-15-dev:riscv64 (15.2.0-1) ... Setting up libssl3t64:riscv64 (3.5.2-1) ... Setting up libidn2-0:riscv64 (2.3.8-3) ... Setting up libunbound8:riscv64 (1.22.0-2) ... Setting up libgmpxx4ldbl:riscv64 (2:6.3.0+dfsg-3) ... Setting up libstdc++-15-dev:riscv64 (15.2.0-1) ... Setting up comerr-dev:riscv64 (2.1-1.47.2-3+b3) ... Setting up libssl-dev:riscv64 (3.5.2-1) ... Setting up libidn2-dev:riscv64 (2.3.8-3) ... Setting up libsasl2-2:riscv64 (2.1.28+dfsg1-9) ... Setting up zlib1g-dev:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libkrb5-3:riscv64 (1.21.3-5) ... Setting up libssh2-1t64:riscv64 (1.11.1-1) ... Setting up libldap2:riscv64 (2.6.10+dfsg-1) ... Setting up libgnutls30t64:riscv64 (3.8.10-2) ... Setting up libgnutls-openssl27t64:riscv64 (3.8.10-2) ... Setting up libgmp-dev:riscv64 (2:6.3.0+dfsg-3) ... Setting up nettle-dev:riscv64 (3.10.1-1) ... Setting up libpsl5t64:riscv64 (0.21.2-1.1+b1) ... Setting up libpsl-dev:riscv64 (0.21.2-1.1+b1) ... Setting up libgnutls-dane0t64:riscv64 (3.8.10-2) ... Setting up librtmp1:riscv64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libldap-dev:riscv64 (2.6.10+dfsg-1) ... Setting up libgssapi-krb5-2:riscv64 (1.21.3-5) ... Setting up libssh2-1-dev:riscv64 (1.11.1-1) ... Setting up libngtcp2-crypto-gnutls8:riscv64 (1.11.0-1) ... Setting up libgnutls28-dev:riscv64 (3.8.10-2) ... Setting up libcurl3t64-gnutls:riscv64 (8.15.0-1) ... Setting up libngtcp2-crypto-gnutls-dev:riscv64 (1.11.0-1) ... Setting up libgssrpc4t64:riscv64 (1.21.3-5) ... Setting up librtmp-dev:riscv64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libkadm5clnt-mit12:riscv64 (1.21.3-5) ... Setting up libkdb5-10t64:riscv64 (1.21.3-5) ... Setting up libkadm5srv-mit12:riscv64 (1.21.3-5) ... Setting up krb5-multidev:riscv64 (1.21.3-5) ... Setting up libkrb5-dev:riscv64 (1.21.3-5) ... Setting up libcurl4-gnutls-dev:riscv64 (8.15.0-1) ... Setting up sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ... Processing triggers for libc-bin (2.41-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.45-4 dpkg-dev_1.22.21 g++-14_14.3.0-5 gcc-14_14.3.0-5 libc6-dev_2.41-12 libstdc++-14-dev_14.3.0-5 libstdc++-14-dev-riscv64-cross_14.3.0-5cross3 libstdc++-15-dev_15.2.0-1 libstdc++6_15.2.0-1 libstdc++6-riscv64-cross_15.2.0-1cross1 linux-libc-dev_6.12.38-1 Package versions: apt_3.1.4 apt-utils_3.1.4 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.2.37-2+b5 binutils_2.45-4 binutils-common_2.45-4 binutils-riscv64-linux-gnu_2.45-4 binutils-x86-64-linux-gnu_2.45-4 bsdextrautils_2.41.1-1 bsdutils_1:2.41.1-1 build-essential_12.12 bzip2_1.0.8-6 comerr-dev_2.1-1.47.2-3+b3 coreutils_9.7-3 cpp_4:14.2.0-1 cpp-14_14.3.0-5 cpp-14-riscv64-linux-gnu_14.3.0-5cross3 cpp-14-x86-64-linux-gnu_14.3.0-5 cpp-riscv64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-riscv64_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.25 debian-archive-keyring_2025.1 debianutils_5.23.2 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.15-1+b1 fakeroot_1.37.1.2-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.3.0-5 g++-14-riscv64-linux-gnu_14.3.0-5cross3 g++-14-x86-64-linux-gnu_14.3.0-5 g++-riscv64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.3.0-5 gcc-14-base_14.3.0-5 gcc-14-cross-base_14.3.0-5cross3 gcc-14-riscv64-linux-gnu_14.3.0-5cross3 gcc-14-riscv64-linux-gnu-base_14.3.0-5cross3 gcc-14-x86-64-linux-gnu_14.3.0-5 gcc-15-base_15.2.0-1 gcc-15-cross-base_15.2.0-1cross1 gcc-riscv64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.11-4 groff-base_1.23.0-9 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.1.4 libarchive-zip-perl_1.68-1 libasan8_15.2.0-1 libasan8-riscv64-cross_15.2.0-1cross1 libatomic1_15.2.0-1 libatomic1-riscv64-cross_15.2.0-1cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.5-1 libaudit1_1:4.0.5-1 libbinutils_2.45-4 libblkid1_2.41.1-1 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libc6-dev-riscv64-cross_2.41-11cross1 libc6-riscv64-cross_2.41-11cross1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcc1-0_15.2.0-1 libcom-err2_1.47.2-3+b3 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-4 libctf0_2.45-4 libcurl3t64-gnutls_8.15.0-1 libcurl4-gnutls-dev_8.15.0-1 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.280 libdebhelper-perl_13.25 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdpkg-perl_1.22.21 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libfakeroot_1.37.1.2-1 libffi8_3.4.8-2 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.3.0-5 libgcc-14-dev-riscv64-cross_14.3.0-5cross3 libgcc-15-dev_15.2.0-1 libgcc-s1_15.2.0-1 libgcc-s1-riscv64-cross_15.2.0-1cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.10-2 libgnutls-openssl27t64_3.8.10-2 libgnutls28-dev_3.8.10-2 libgnutls30t64_3.8.10-2 libgomp1_15.2.0-1 libgomp1-riscv64-cross_15.2.0-1cross1 libgprofng0_2.45-4 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libhogweed6t64_3.10.1-1 libhtscodecs-dev_1.6.1-2 libhtscodecs2_1.6.1-2 libhwasan0_15.2.0-1 libidn2-0_2.3.8-3 libidn2-dev_2.3.8-3 libisl23_0.27-1 libitm1_15.2.0-1 libitm1-riscv64-cross_15.2.0-1cross1 libjansson4_2.14-2+b3 libk5crypto3_1.21.3-5 libkadm5clnt-mit12_1.21.3-5 libkadm5srv-mit12_1.21.3-5 libkdb5-10t64_1.21.3-5 libkeyutils1_1.6.3-6 libkrb5-3_1.21.3-5 libkrb5-dev_1.21.3-5 libkrb5support0_1.21.3-5 liblastlog2-2_2.41.1-1 libldap-dev_2.6.10+dfsg-1 libldap2_2.6.10+dfsg-1 liblsan0_15.2.0-1 liblsan0-riscv64-cross_15.2.0-1cross1 liblz4-1_1.10.0-4 liblzma-dev_5.8.1-1 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.1-1 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1.1+b1 libnghttp2-dev_1.64.0-1.1+b1 libnghttp3-9_1.8.0-1 libnghttp3-dev_1.8.0-1 libngtcp2-16_1.11.0-1 libngtcp2-crypto-gnutls-dev_1.11.0-1 libngtcp2-crypto-gnutls8_1.11.0-1 libngtcp2-dev_1.11.0-1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-6 libpipeline1_1.5.8-1 libpkgconf3_1.8.1-4 libpsl-dev_0.21.2-1.1+b1 libpsl5t64_0.21.2-1.1+b1 libquadmath0_15.2.0-1 librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5 librtmp1_2.4+20151223.gitfa8646d.1-2+b5 libsasl2-2_2.1.28+dfsg1-9 libsasl2-modules-db_2.1.28+dfsg1-9 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsemanage-common_3.8.1-1 libsemanage2_3.8.1-1 libsepol2_3.8.1-1 libsframe2_2.45-4 libsmartcols1_2.41.1-1 libsqlite3-0_3.46.1-7 libssh2-1-dev_1.11.1-1 libssh2-1t64_1.11.1-1 libssl-dev_3.5.2-1 libssl3t64_3.5.2-1 libstdc++-14-dev_14.3.0-5 libstdc++-14-dev-riscv64-cross_14.3.0-5cross3 libstdc++-15-dev_15.2.0-1 libstdc++6_15.2.0-1 libstdc++6-riscv64-cross_15.2.0-1cross1 libsystemd0_258~rc2-2 libtasn1-6_4.20.0-2 libtasn1-6-dev_4.20.0-2 libtinfo6_6.5+20250216-2 libtool_2.5.4-4 libtsan2_15.2.0-1 libtsan2-riscv64-cross_15.2.0-1cross1 libubsan1_15.2.0-1 libubsan1-riscv64-cross_15.2.0-1cross1 libuchardet0_0.0.8-1+b2 libudev1_258~rc2-2 libunbound8_1.22.0-2 libunistring5_1.3-2 libuuid1_2.41.1-1 libxml2-16_2.14.5+dfsg-0.1 libxxhash0_0.8.3-2 libzstd-dev_1.5.7+dfsg-1 libzstd1_1.5.7+dfsg-1 linux-libc-dev_6.12.38-1 linux-libc-dev-riscv64-cross_6.12.38-1cross1 login_1:4.16.0-2+really2.41.1-1 login.defs_1:4.17.4-2 m4_1.4.19-8 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 mount_2.41.1-1 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 nettle-dev_3.10.1-1 openssl-provider-legacy_3.5.2-1 passwd_1:4.17.4-2 patch_2.8-2 perl_5.40.1-6 perl-base_5.40.1-6 perl-modules-5.40_5.40.1-6 pkgconf_1.8.1-4 pkgconf-bin_1.8.1-4 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.25 sqv_1.3.0-3 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-5 util-linux_2.41.1-1 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: htslib Binary: libhts3t64, libhts-dev, htslib-test, tabix Architecture: any all Version: 1.22.1+ds-1 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Michael R. Crusoe , Steffen Moeller , Étienne Mollier Homepage: https://github.com/samtools/htslib Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/htslib Vcs-Git: https://salsa.debian.org/med-team/htslib.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, build-essential Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev (>= 1.0) Package-List: htslib-test deb science optional arch=all libhts-dev deb libdevel optional arch=any libhts3t64 deb libs optional arch=any tabix deb science optional arch=any Checksums-Sha1: c1b5a619049536c4cdc4c155ce0e42aea9fac95e 1623067 htslib_1.22.1+ds.orig.tar.bz2 4c43881f1b060fff6ebfdcaff038933d75e97e80 21520 htslib_1.22.1+ds-1.debian.tar.xz Checksums-Sha256: 5aecf49eb089bb231c79e5d9dace7815507daab4b097c41de039f31dcbb85984 1623067 htslib_1.22.1+ds.orig.tar.bz2 440d1b9ce9c7014075a8dc5aebf0a047a9d4709a058c716f7a2ab0d112a0ad2a 21520 htslib_1.22.1+ds-1.debian.tar.xz Files: 5b8aedbc17648d34ff53590516032ca8 1623067 htslib_1.22.1+ds.orig.tar.bz2 f6f0ecc81d680b0adeac75342c1ff010 21520 htslib_1.22.1+ds-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCgAxFiEE3z4uQkp+J5wuSwI6ucKa7rL0UKcFAmiiL2wTHG1vZWxsZXJA ZGViaWFuLm9yZwAKCRC5wprusvRQp8Y6D/9YuDHtloaBbmwaV3hiyX91EF5OAwz2 yGUnlcnkIV+NyxDVSAQnfxnLEva1GF6ehZd0iKCiCyBwkhttf5HgtxMqFyRDZjRy TUlfpnUcb1t1LcFneR9dvv0NgTOcenTT90qrPH/osP334VK8IGP7v+/NjgnuEq4w EcxxAQPnyshROPKSsJkddvtfXF0gaLAwla0FGpvu8aSyPdawVEeASUlrzMf79yDR D61Qhcf4X+S4rfkHjGSChQKKZPK4imgyHGUC4jM0QsU5F37fFI/2H7ajz39Buiqh mPFWBNQzxgZYWndpxoBeu46qsVwZTcE9V+xeE4FqSJ2kayVOWJhDFlSpVaYYsD9F 4H0tTGgZpLwM6b8+E0uye3Rqpn5D2wJhbJmFhWrLOxFC8YzJ10GBAuHfoNDGhx2k q7aqYXZ7DBdIpfoVuABXI+SopEHnrvCaGKDYmff9/L0oSpitmjBynFrvZBRGxgKM 4DARYQSqF8ooCWhZ6MhZ+2jeGlRbw0pSGAEK3lQbotrP59vBHK1Ra2nUzaXCzAY6 kAAM4qQ1YRsaWpQRqxFHZNvqIWjfk47bdc6tctvjLChxGREoQnwz0nyYFq35UaOz IriwWv/OisBT+tEqs2l9cPvCQPn49kGoBFF7J84yqvfu6iLXaGbbob2NX0FRqFVZ aOXCFJ91ALiASQ== =ifZG -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./htslib_1.22.1+ds-1.dsc: no acceptable signature found dpkg-source: info: extracting htslib in /<> dpkg-source: info: unpacking htslib_1.22.1+ds.orig.tar.bz2 dpkg-source: info: unpacking htslib_1.22.1+ds-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_git_version dpkg-source: info: applying define_PATH_MAX.patch dpkg-source: info: applying fPIC.patch dpkg-source: info: applying testShebang.patch dpkg-source: info: applying fix_float_precision dpkg-source: info: applying fix_sequence_of_linked_libs.patch dpkg-source: info: applying trim-file-prefix.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.riscv64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.Lonvuves7r/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-b26183b7-c8b4-4926-9631-ecefb82d8b5f SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ariscv64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package htslib dpkg-buildpackage: info: source version 1.22.1+ds-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-architecture: warning: specified GNU system type riscv64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 dpkg-source: info: using options from htslib-1.22.1+ds/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis\.yml|README.md|aclocal.m4|config.h.in|configure)$ debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 distclean make[2]: Entering directory '/<>' rm -f test/*.tmp test/*.tmp.* test/faidx/*.tmp* \ test/longrefs/*.tmp.* test/ref_cache/*.tmp.* test/tabix/*.tmp.* \ test/bgzf_boundaries/*.tmp.* test/*/FAIL* \ header-exports.txt shlib-exports-so.txt rm -rf htscodecs/tests/test.out rm -f *.o *.pico cram/*.o cram/*.pico test/*.o test/*.dSYM config_vars.h version.h rm -f htscodecs/htscodecs/*.o htscodecs/htscodecs/*.pico rm -f hts-object-files rm -f htscodecs/tests/*.o rm -f ref_cache/*.o rm -f libhts.so libhts.so.* rm -f libhts.a annot-tsv bgzip htsfile tabix test/hts_endian test/fieldarith test/hfile test/pileup test/pileup_mod test/plugins-dlhts test/sam test/test_bgzf test/test_expr test/test_faidx test/test_kfunc test/test_khash test/test_kstring test/test_mod test/test_nibbles test/test_realn test/test-regidx test/test_str2int test/test_time_funcs test/test_view test/test_index test/test-vcf-api test/test-vcf-sweep test/test-bcf-sr test/fuzz/hts_open_fuzzer.o test/test-bcf-translate test/test-parse-reg test/test_introspection test/test-bcf_set_variant_type test/thrash_threads1 test/thrash_threads2 test/thrash_threads3 test/thrash_threads4 test/thrash_threads5 test/thrash_threads6 test/thrash_threads7 rm -f htscodecs/tests/rans4x8 htscodecs/tests/rans4x16pr htscodecs/tests/arith_dynamic htscodecs/tests/tokenise_name3 htscodecs/tests/fqzcomp_qual htscodecs/tests/varint rm -f config.cache config.h config.log config.mk config.status rm -f TAGS *.pc.tmp *-uninstalled.pc htslib_static.mk htscodecs.mk rm -rf autom4te.cache make[2]: Leaving directory '/<>' rm -rf test_backup/ make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libhts3t64.substvars debian/libhts-dev.substvars debian/htslib-test.substvars debian/tabix.substvars debian/files rm -fr -- debian/libhts3t64/ debian/tmp/ debian/libhts-dev/ debian/htslib-test/ debian/tabix/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a cp -an --reflink=auto config.guess debian/.debhelper/bucket/files/ec2577614252326f889df1de97b9a457c03a9a94811048563c211a44496d8ba3.tmp mv debian/.debhelper/bucket/files/ec2577614252326f889df1de97b9a457c03a9a94811048563c211a44496d8ba3.tmp debian/.debhelper/bucket/files/ec2577614252326f889df1de97b9a457c03a9a94811048563c211a44496d8ba3 cp -f /usr/share/misc/config.guess ./config.guess cp -an --reflink=auto config.sub debian/.debhelper/bucket/files/465c5fe67c7d36b72e808812716445d4d38d4b94734ca8d36a8639d12323878b.tmp mv debian/.debhelper/bucket/files/465c5fe67c7d36b72e808812716445d4d38d4b94734ca8d36a8639d12323878b.tmp debian/.debhelper/bucket/files/465c5fe67c7d36b72e808812716445d4d38d4b94734ca8d36a8639d12323878b cp -f /usr/share/misc/config.sub ./config.sub dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' # create clean copy of test dir cp -a test test_backup # to help with cross building, otherwise MMAP might get turned off export ac_cv_func_mmap_fixed_mapped=yes \ && autoconf \ && dh_auto_configure -- \ --enable-libcurl \ --enable-gcs \ --enable-s3 \ --enable-plugins \ --with-plugin-dir='/usr/lib/riscv64-linux-gnu/htslib' \ --with-external-htscodecs \ --with-plugin-path='/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/riscv64-linux-gnu/htslib' ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/riscv64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=riscv64-linux-gnu --enable-libcurl --enable-gcs --enable-s3 --enable-plugins --with-plugin-dir=/usr/lib/riscv64-linux-gnu/htslib --with-external-htscodecs --with-plugin-path=/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/riscv64-linux-gnu/htslib checking for riscv64-linux-gnu-gcc... riscv64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether riscv64-linux-gnu-gcc accepts -g... yes checking for riscv64-linux-gnu-gcc option to enable C11 features... none needed checking for riscv64-linux-gnu-ranlib... riscv64-linux-gnu-ranlib checking for grep that handles long lines and -e... /usr/bin/grep checking for C compiler warning flags... -Wall checking for riscv64-linux-gnu-gcc options needed to detect all undeclared functions... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/param.h... yes checking whether _XOPEN_SOURCE is declared... no checking whether __get_cpuid_max is declared... no checking whether __cpuid_count is declared... no checking for riscv64-linux-gnu-pkg-config... /usr/bin/riscv64-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for -Wdate-time -D_FORTIFY_SOURCE=2 option for large files... none needed checking shared library type for riscv64-linux-gnu... plain .so checking whether the linker supports versioned symbols... yes checking whether the compiler accepts -fvisibility=hidden... yes checking build system type... x86_64-pc-linux-gnu checking host system type... riscv64-unknown-linux-gnu checking for getpagesize... yes checking for working mmap... (cached) yes checking for gmtime_r... yes checking for fsync... yes checking for drand48... yes checking for srand48_deterministic... no checking for getauxval... yes checking for elf_aux_info... no checking for posix_memalign... yes checking whether fdatasync is declared... yes checking for fdatasync... yes checking for __attribute__((constructor))... yes checking for clock_gettime with CLOCK_PROCESS_CPUTIME_ID... yes checking for library containing dlsym... none required checking whether the compiler accepts -rdynamic... yes checking for library containing log... -lm checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing recv... none required checking for bzlib.h... yes checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for lzma.h... yes checking for lzma_easy_buffer_encode in -llzma... yes checking for htscodecs/rANS_static4x16.h... yes checking for rans_compress_bound_4x16 in -lhtscodecs... yes checking for libdeflate.h... yes checking for libdeflate_deflate_compress in -ldeflate... yes checking for curl/curl.h... yes checking for curl_easy_pause in -lcurl... yes checking for CCHmac... no checking for library containing HMAC... -lcrypto checking for CMSG_LEN... yes checking for epoll... yes (edge triggered) checking for sendfile... yes, Linux-style checking whether EHOSTDOWN is declared... yes checking whether ENONET is declared... yes checking whether AI_V4MAPPED is declared... yes checking whether AI_ADDRCONFIG is declared... yes checking whether the compiler accepts -Wextra... yes checking whether the compiler accepts -Wformat... yes checking whether the compiler accepts -Wformat=2... yes checking whether the compiler accepts -Wconversion... yes checking whether the compiler accepts -Wtrampolines... yes checking whether the compiler accepts -Wstrict-aliasing... yes checking whether the compiler accepts -fstack-clash-protection... yes checking whether the compiler accepts -fstack-protector-strong... yes checking whether the compiler accepts -fcf-protection=full... no checking whether the compiler accepts -mbranch-protection=standard... no checking whether the compiler accepts -fno-delete-null-pointer-checks... yes checking whether the compiler accepts -Wl,-z,noexecstack... yes checking whether the compiler accepts -Wl,-z,relro... yes checking whether the compiler accepts -Wl,-z,now... yes checking whether the compiler accepts -Wl,--as-needed... yes checking whether the compiler accepts -Wl,--no-copy-dt-needed-entries... yes checking whether the compiler accepts -Wl,-z,nodlopen... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating htslib.pc.tmp config.status: creating config.h config.status: linking htscodecs_external.mk to htscodecs.mk make[1]: Leaving directory '/<>' rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' dh_auto_build -- \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="-I. -DSAMTOOLS=1 $(dpkg-buildflags --get CPPFLAGS)" \ PACKAGE_VERSION="1.22.1" \ libdir=/usr/lib/riscv64-linux-gnu make -j1 "CFLAGS=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects" "CPPFLAGS=-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" PACKAGE_VERSION=1.22.1 libdir=/usr/lib/riscv64-linux-gnu make[2]: Entering directory '/<>' riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kfunc.o kfunc.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kstring.o kstring.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bcf_sr_sort.o bcf_sr_sort.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bgzf.o bgzf.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o errmod.o errmod.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o faidx.o faidx.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o header.o header.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hfile.o hfile.c echo '#define HTS_VERSION_TEXT "1.22.1"' > version.h printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ 'riscv64-linux-gnu-gcc' \ '-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2' \ '-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects' \ '-Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic' \ '-ldeflate -lhtscodecs -llzma -lbz2 -lz -lm ' \ | sed 's/-ffile-prefix-map=[^ ]*=.//' \ > config_vars.h riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts.o hts.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts_expr.o hts_expr.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts_os.o hts_os.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o md5.o md5.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multipart.o multipart.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o probaln.o probaln.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o realn.o realn.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o regidx.o regidx.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o region.o region.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_mods.o sam_mods.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o simd.o simd.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o synced_bcf_reader.o synced_bcf_reader.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects 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riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_encode.o cram/cram_encode.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_external.o cram/cram_external.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_index.o cram/cram_index.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o simd.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o plugin.o riscv64-linux-gnu-ranlib libhts.a riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o kfunc.pico kfunc.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o kstring.pico kstring.c riscv64-linux-gnu-gcc -g -O2 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-Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o faidx.pico faidx.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o header.pico header.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile.pico hfile.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts.pico hts.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts_expr.pico hts_expr.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts_os.pico hts_os.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o md5.pico md5.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o multipart.pico multipart.c riscv64-linux-gnu-gcc -g -O2 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-Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o region.pico region.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o sam.pico sam.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o sam_mods.pico sam_mods.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o simd.pico simd.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o synced_bcf_reader.pico synced_bcf_reader.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcf_sweep.pico vcf_sweep.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o tbx.pico tbx.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o textutils.pico textutils.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o thread_pool.pico thread_pool.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcf.pico vcf.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcfutils.pico vcfutils.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects 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riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_index.pico cram/cram_index.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_io.pico cram/cram_io.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_stats.pico cram/cram_stats.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/mFILE.pico cram/mFILE.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/open_trace_file.pico cram/open_trace_file.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/pooled_alloc.pico cram/pooled_alloc.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/string_alloc.pico cram/string_alloc.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -DPLUGINPATH=\"/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/riscv64-linux-gnu/htslib\" -fPIC -c -o plugin.pico plugin.c riscv64-linux-gnu-gcc -shared -Wl,-soname,libhts.so.3 -Wl,-version-script,htslib.map -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o libhts.so kfunc.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico header.pico hfile.pico hts.pico hts_expr.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico region.pico sam.pico sam_mods.pico simd.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_stats.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/string_alloc.pico plugin.pico -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread ln -sf libhts.so libhts.so.3 riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o annot-tsv.o annot-tsv.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o annot-tsv annot-tsv.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bgzip.o bgzip.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o bgzip bgzip.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o htsfile.o htsfile.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o htsfile htsfile.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tabix.o tabix.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o tabix tabix.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_libcurl.pico hfile_libcurl.c riscv64-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_libcurl.so hfile_libcurl.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lcurl -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_gcs.pico hfile_gcs.c riscv64-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_gcs.so hfile_gcs.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_s3.pico hfile_s3.c riscv64-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_s3.so hfile_s3.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lcrypto -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_s3_write.pico hfile_s3_write.c riscv64-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_s3_write.so hfile_s3_write.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lcrypto -lcurl -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/hts_endian.o test/hts_endian.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/hts_endian test/hts_endian.o -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/fieldarith.o test/fieldarith.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/fieldarith test/fieldarith.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/hfile.o test/hfile.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/hfile test/hfile.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/pileup.o test/pileup.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/pileup test/pileup.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/pileup_mod.o test/pileup_mod.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/pileup_mod test/pileup_mod.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/plugins-dlhts.o test/plugins-dlhts.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/plugins-dlhts test/plugins-dlhts.o -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/sam.o test/sam.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/sam test/sam.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_bgzf.o test/test_bgzf.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_bgzf test/test_bgzf.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_expr.o test/test_expr.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_expr test/test_expr.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_faidx.o test/test_faidx.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_faidx test/test_faidx.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_kfunc.o test/test_kfunc.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_kfunc test/test_kfunc.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_khash.o test/test_khash.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_khash test/test_khash.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_kstring.o test/test_kstring.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_kstring test/test_kstring.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_mod.o test/test_mod.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_mod test/test_mod.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_nibbles.o test/test_nibbles.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_nibbles test/test_nibbles.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_realn.o test/test_realn.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_realn test/test_realn.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-regidx.o test/test-regidx.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-regidx test/test-regidx.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_str2int.o test/test_str2int.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_str2int test/test_str2int.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_time_funcs.o test/test_time_funcs.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_time_funcs test/test_time_funcs.o riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_view.o test/test_view.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_view test/test_view.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_index.o test/test_index.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_index test/test_index.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-vcf-api.o test/test-vcf-api.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-vcf-api test/test-vcf-api.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-vcf-sweep.o test/test-vcf-sweep.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-vcf-sweep test/test-vcf-sweep.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf-sr.o test/test-bcf-sr.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf-sr test/test-bcf-sr.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf-translate.o test/test-bcf-translate.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf-translate test/test-bcf-translate.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-parse-reg.o test/test-parse-reg.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-parse-reg test/test-parse-reg.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_introspection.o test/test_introspection.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_introspection test/test_introspection.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf_set_variant_type.o test/test-bcf_set_variant_type.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf_set_variant_type test/test-bcf_set_variant_type.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread sed -n '/^static_libs=/s/[^=]*=/HTSLIB_static_LIBS = /p;/^static_ldflags=/s/[^=]*=/HTSLIB_static_LDFLAGS = /p' htslib.pc.tmp > htslib_static.mk sed -e "s#@-includedir@#`pwd`#g;s#@-libdir@#`pwd`#g" htslib.pc.tmp > htslib-uninstalled.pc riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/cmsg_wrap.o ref_cache/cmsg_wrap.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/http_parser.o ref_cache/http_parser.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/listener.o ref_cache/listener.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/log_files.o ref_cache/log_files.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/main.o ref_cache/main.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/misc.o ref_cache/misc.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/ping.o ref_cache/ping.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/poll_wrap_epoll.o ref_cache/poll_wrap_epoll.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/poll_wrap_poll.o ref_cache/poll_wrap_poll.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/ref_files.o ref_cache/ref_files.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/request_handler.o ref_cache/request_handler.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/sendfile_wrap.o ref_cache/sendfile_wrap.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/server.o ref_cache/server.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/transaction.o ref_cache/transaction.c riscv64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/upstream.o ref_cache/upstream.c riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -Wl,-z,noexecstack -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,nodlopen -o ref_cache/ref-cache ref_cache/cmsg_wrap.o ref_cache/http_parser.o ref_cache/listener.o ref_cache/log_files.o ref_cache/main.o ref_cache/misc.o ref_cache/ping.o ref_cache/poll_wrap_epoll.o ref_cache/poll_wrap_poll.o ref_cache/ref_files.o ref_cache/request_handler.o ref_cache/sendfile_wrap.o ref_cache/server.o ref_cache/transaction.o ref_cache/upstream.o cram/pooled_alloc.o md5.o -lcurl make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/libhts3t64.substvars debian/libhts-dev.substvars debian/tabix.substvars rm -fr -- debian/.debhelper/generated/libhts3t64/ debian/libhts3t64/ debian/tmp/ debian/.debhelper/generated/libhts-dev/ debian/libhts-dev/ debian/.debhelper/generated/tabix/ debian/tabix/ rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>' for binary in sam test-regidx hts_endian test-bcf-sr test_bgzf ; do \ rm /<>/test/${binary} ; \ done dh_auto_install -- prefix=/usr \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="-I. -DSAMTOOLS=1 $(dpkg-buildflags --get CPPFLAGS)" \ PACKAGE_VERSION="1.22.1" \ libdir=/usr/lib/riscv64-linux-gnu install -m0755 -d /<>/htslib-1.22.1\+ds/debian/tmp make -j1 install DESTDIR=/<>/htslib-1.22.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr "CFLAGS=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -ffat-lto-objects -ffat-lto-objects" "CPPFLAGS=-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" PACKAGE_VERSION=1.22.1 libdir=/usr/lib/riscv64-linux-gnu make[2]: Entering directory '/<>' mkdir -p -m 755 /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/include /<>/debian/tmp/usr/include/htslib /<>/debian/tmp/usr/lib/riscv64-linux-gnu /<>/debian/tmp/usr/share/man/man1 /<>/debian/tmp/usr/share/man/man5 /<>/debian/tmp/usr/share/man/man7 /<>/debian/tmp/usr/lib/riscv64-linux-gnu/pkgconfig if test -n "/usr/lib/riscv64-linux-gnu/htslib"; then mkdir -p -m 755 /<>/debian/tmp/usr/lib/riscv64-linux-gnu/htslib; fi install -p -m 644 libhts.so /<>/debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 ln -sf libhts.so.1.22.1 /<>/debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so ln -sf libhts.so.1.22.1 /<>/debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so.3 sed -e 's#@-includedir@#/usr/include#g;s#@-libdir@#/usr/lib/riscv64-linux-gnu#g;s#@-PACKAGE_VERSION@#1.22.1#g' htslib.pc.tmp > /<>/debian/tmp/usr/lib/riscv64-linux-gnu/pkgconfig/htslib.pc chmod 644 /<>/debian/tmp/usr/lib/riscv64-linux-gnu/pkgconfig/htslib.pc install -p annot-tsv bgzip htsfile tabix ref_cache/ref-cache /<>/debian/tmp/usr/bin if test -n "hfile_libcurl.so hfile_gcs.so hfile_s3.so hfile_s3_write.so"; then install -p hfile_libcurl.so hfile_gcs.so hfile_s3.so hfile_s3_write.so /<>/debian/tmp/usr/lib/riscv64-linux-gnu/htslib; fi install -p -m 644 htslib/*.h /<>/debian/tmp/usr/include/htslib install -p -m 644 libhts.a /<>/debian/tmp/usr/lib/riscv64-linux-gnu/libhts.a install -p -m 644 annot-tsv.1 bgzip.1 htsfile.1 tabix.1 /<>/debian/tmp/usr/share/man/man1 if test "xref_cache/ref-cache" != "x" ; then \ install -p -m 644 ref_cache/ref-cache.1 /<>/debian/tmp/usr/share/man/man1 ; \ fi install -p -m 644 faidx.5 sam.5 vcf.5 /<>/debian/tmp/usr/share/man/man5 install -p -m 644 htslib-s3-plugin.7 /<>/debian/tmp/usr/share/man/man7 make[2]: Leaving directory '/<>' # restore clean copy of test dir before dh_install is run # This should not be done earlier since dh_auto_install contains some unconditional removals rm -f -r test mv test_backup test make[1]: Leaving directory '/<>' dh_install -a install -m0755 -d debian/libhts3t64/usr/lib/riscv64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/riscv64-linux-gnu/htslib debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so.3 debian/libhts3t64/usr/lib/riscv64-linux-gnu/ install -m0755 -d debian/libhts3t64/usr/share/man/man5 cp --reflink=auto -a debian/tmp/usr/share/man/man5/faidx.5 debian/tmp/usr/share/man/man5/sam.5 debian/tmp/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man5/ install -m0755 -d debian/libhts-dev/usr/include cp --reflink=auto -a debian/tmp/usr/include/htslib debian/libhts-dev/usr/include/ install -m0755 -d debian/libhts-dev/usr/lib/riscv64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/riscv64-linux-gnu/libhts.a debian/tmp/usr/lib/riscv64-linux-gnu/libhts.so debian/libhts-dev/usr/lib/riscv64-linux-gnu/ install -m0755 -d debian/libhts-dev/usr/lib/riscv64-linux-gnu/pkgconfig cp --reflink=auto -a debian/tmp/usr/lib/riscv64-linux-gnu/pkgconfig/htslib.pc debian/libhts-dev/usr/lib/riscv64-linux-gnu/pkgconfig/ install -m0755 -d debian/tabix/usr/bin cp --reflink=auto -a ./bgzip ./htsfile ./tabix debian/tabix/usr/bin/ rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_installdocs make[1]: Entering directory '/<>' dh_installdocs install -m0755 -d debian/libhts3t64/usr/share/doc/libhts3t64 install -p -m0644 debian/copyright debian/libhts3t64/usr/share/doc/libhts3t64/copyright install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./debian/README.test debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./README debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./README.large_positions.md debian/libhts-dev/usr/share/doc/libhts-dev chmod -R u\+rw,go=rX debian/libhts-dev/usr/share/doc install -p -m0644 debian/copyright debian/libhts-dev/usr/share/doc/libhts-dev/copyright install -m0755 -d debian/tabix/usr/share/doc/tabix install -p -m0644 debian/copyright debian/tabix/usr/share/doc/tabix/copyright # Fix Perl interpreter path for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done grep: debian/libhts-dev/usr/lib/riscv64-linux-gnu/libhts.so: No such file or directory make[1]: Leaving directory '/<>' rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs NEWS install -m0755 -d debian/libhts3t64/usr/share/doc/libhts3t64 install -p -m0644 debian/.debhelper/generated/libhts3t64/dh_installchangelogs.dch.trimmed debian/libhts3t64/usr/share/doc/libhts3t64/changelog.Debian install -p -m0644 NEWS debian/libhts3t64/usr/share/doc/libhts3t64/changelog install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev install -p -m0644 debian/.debhelper/generated/libhts-dev/dh_installchangelogs.dch.trimmed debian/libhts-dev/usr/share/doc/libhts-dev/changelog.Debian install -p -m0644 NEWS debian/libhts-dev/usr/share/doc/libhts-dev/changelog install -m0755 -d debian/tabix/usr/share/doc/tabix install -p -m0644 debian/.debhelper/generated/tabix/dh_installchangelogs.dch.trimmed debian/tabix/usr/share/doc/tabix/changelog.Debian install -p -m0644 NEWS debian/tabix/usr/share/doc/tabix/changelog make[1]: Leaving directory '/<>' dh_installman -a install -m0755 -d debian/libhts3t64/usr/share/man/man7/ install -p -m0644 ./htslib-s3-plugin.7 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./htsfile.1 debian/tabix/usr/share/man/man1/htsfile.1 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./tabix.1 debian/tabix/usr/share/man/man1/tabix.1 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./bgzip.1 debian/tabix/usr/share/man/man1/bgzip.1 man-recode --to-code UTF-8 --suffix .dh-new debian/libhts3t64/usr/share/man/man5/faidx.5 debian/libhts3t64/usr/share/man/man5/sam.5 debian/libhts3t64/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 debian/tabix/usr/share/man/man1/bgzip.1 debian/tabix/usr/share/man/man1/htsfile.1 debian/tabix/usr/share/man/man1/tabix.1 mv debian/libhts3t64/usr/share/man/man5/faidx.5.dh-new debian/libhts3t64/usr/share/man/man5/faidx.5 mv debian/libhts3t64/usr/share/man/man5/sam.5.dh-new debian/libhts3t64/usr/share/man/man5/sam.5 mv debian/libhts3t64/usr/share/man/man5/vcf.5.dh-new debian/libhts3t64/usr/share/man/man5/vcf.5 mv debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7.dh-new debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 mv debian/tabix/usr/share/man/man1/bgzip.1.dh-new debian/tabix/usr/share/man/man1/bgzip.1 mv debian/tabix/usr/share/man/man1/htsfile.1.dh-new debian/tabix/usr/share/man/man1/htsfile.1 mv debian/tabix/usr/share/man/man1/tabix.1.dh-new debian/tabix/usr/share/man/man1/tabix.1 chmod 0644 -- debian/libhts3t64/usr/share/man/man5/faidx.5 debian/libhts3t64/usr/share/man/man5/sam.5 debian/libhts3t64/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 debian/tabix/usr/share/man/man1/bgzip.1 debian/tabix/usr/share/man/man1/htsfile.1 debian/tabix/usr/share/man/man1/tabix.1 dh_lintian -a install -m0755 -d debian/libhts-dev/usr/share/lintian/overrides install -p -m0644 debian/libhts-dev.lintian-overrides debian/libhts-dev/usr/share/lintian/overrides/libhts-dev dh_perl -a dh_link -a rm -f debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.3 ln -s libhts.so.1.22.1 debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.3 rm -f debian/libhts-dev/usr/lib/riscv64-linux-gnu/libhts.so ln -s libhts.so.1.22.1 debian/libhts-dev/usr/lib/riscv64-linux-gnu/libhts.so install -m0755 -d debian/tabix/usr/share/man/man1 rm -f debian/tabix/usr/share/man/man1/bgzip.1.gz ln -s tabix.1.gz debian/tabix/usr/share/man/man1/bgzip.1.gz dh_strip_nondeterminism -a dh_compress -a cd debian/libhts3t64 chmod a-x usr/share/doc/libhts3t64/changelog usr/share/doc/libhts3t64/changelog.Debian usr/share/man/man5/faidx.5 usr/share/man/man5/sam.5 usr/share/man/man5/vcf.5 usr/share/man/man7/htslib-s3-plugin.7 gzip -9nf usr/share/doc/libhts3t64/changelog usr/share/doc/libhts3t64/changelog.Debian usr/share/man/man5/faidx.5 usr/share/man/man5/sam.5 usr/share/man/man5/vcf.5 usr/share/man/man7/htslib-s3-plugin.7 cd '/<>' cd debian/libhts-dev chmod a-x usr/share/doc/libhts-dev/README.large_positions.md usr/share/doc/libhts-dev/changelog usr/share/doc/libhts-dev/changelog.Debian gzip -9nf usr/share/doc/libhts-dev/README.large_positions.md usr/share/doc/libhts-dev/changelog usr/share/doc/libhts-dev/changelog.Debian cd '/<>' cd debian/tabix chmod a-x usr/share/doc/tabix/changelog usr/share/doc/tabix/changelog.Debian usr/share/man/man1/bgzip.1 usr/share/man/man1/htsfile.1 usr/share/man/man1/tabix.1 gzip -9nf usr/share/doc/tabix/changelog usr/share/doc/tabix/changelog.Debian usr/share/man/man1/bgzip.1 usr/share/man/man1/htsfile.1 usr/share/man/man1/tabix.1 cd '/<>' rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/<>' dh_fixperms find debian/libhts3t64 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts3t64/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts3t64/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts3t64/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libhts-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts-dev/usr/include debian/libhts-dev/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/tabix ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tabix/usr/share/doc -type f -a -true -a ! -regex 'debian/tabix/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tabix/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian -name simple_test_driver.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/<>' rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_missing make[1]: Entering directory '/<>' # FIXME: No idea why these files are remaining in debian/tmp rm -rf debian/tmp/usr/bin debian/tmp/usr/share/man dh_missing make[1]: Leaving directory '/<>' dh_dwz -a install -m0755 -d debian/libhts3t64/usr/lib/debug/.dwz/riscv64-linux-gnu dwz -mdebian/libhts3t64/usr/lib/debug/.dwz/riscv64-linux-gnu/libhts3t64.debug -M/usr/lib/debug/.dwz/riscv64-linux-gnu/libhts3t64.debug -- debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 dwz: debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1: DWARF compression not beneficial - old size 880912 new size 902596 riscv64-linux-gnu-objcopy --compress-debug-sections debian/libhts3t64/usr/lib/debug/.dwz/riscv64-linux-gnu/libhts3t64.debug chmod 0644 -- debian/libhts3t64/usr/lib/debug/.dwz/riscv64-linux-gnu/libhts3t64.debug install -m0755 -d debian/tabix/usr/lib/debug/.dwz/riscv64-linux-gnu dwz -mdebian/tabix/usr/lib/debug/.dwz/riscv64-linux-gnu/tabix.debug -M/usr/lib/debug/.dwz/riscv64-linux-gnu/tabix.debug -- debian/tabix/usr/bin/bgzip debian/tabix/usr/bin/htsfile debian/tabix/usr/bin/tabix riscv64-linux-gnu-objcopy --compress-debug-sections debian/tabix/usr/lib/debug/.dwz/riscv64-linux-gnu/tabix.debug chmod 0644 -- debian/tabix/usr/lib/debug/.dwz/riscv64-linux-gnu/tabix.debug rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_strip make[1]: Entering directory '/<>' # This is apparently important for the interpretation by ldc2 in sambamba dh_strip -Xlibhts.a install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/20 riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/20/dbd42c2715ddff8271ff5035140a2babf2cbca.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/20/dbd42c2715ddff8271ff5035140a2babf2cbca.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/20/dbd42c2715ddff8271ff5035140a2babf2cbca.debug debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/ef riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/ef/f0d722fdcbfca14341a9ca974d7dcffc7eb29e.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/ef/f0d722fdcbfca14341a9ca974d7dcffc7eb29e.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/ef/f0d722fdcbfca14341a9ca974d7dcffc7eb29e.debug debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/45 riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/45/c435bffa7c070d81b509fed67b80a6e2935aea.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/45/c435bffa7c070d81b509fed67b80a6e2935aea.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/45/c435bffa7c070d81b509fed67b80a6e2935aea.debug debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/be riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/be/363bbf600cef37251aca77b4591d157b74fc4e.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/be/363bbf600cef37251aca77b4591d157b74fc4e.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/be/363bbf600cef37251aca77b4591d157b74fc4e.debug debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/0c riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/0c/d747d76b655d2cde757eb215103c31b284e5b8.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/0c/d747d76b655d2cde757eb215103c31b284e5b8.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/0c/d747d76b655d2cde757eb215103c31b284e5b8.debug debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libhts3t64/usr/lib/debug/.dwz/riscv64-linux-gnu debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libhts3t64/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libhts3t64/usr/lib/debug install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/share/doc ln -s libhts3t64 debian/.debhelper/libhts3t64/dbgsym-root/usr/share/doc/libhts3t64-dbgsym install -m0755 -d debian/.debhelper/libhts3t64 install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/53 riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/tabix debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/53/9111e046996190920d049f1f845f6d147195e4.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/53/9111e046996190920d049f1f845f6d147195e4.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/tabix riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/53/9111e046996190920d049f1f845f6d147195e4.debug debian/tabix/usr/bin/tabix install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/c2 riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/htsfile debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/c2/c662f52806898c69056265a869e5bbf98762a5.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/c2/c662f52806898c69056265a869e5bbf98762a5.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/htsfile riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/c2/c662f52806898c69056265a869e5bbf98762a5.debug debian/tabix/usr/bin/htsfile install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/f3 riscv64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/bgzip debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/f3/57580cfa28c44acd99f273351f929db1a47c82.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/f3/57580cfa28c44acd99f273351f929db1a47c82.debug riscv64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/bgzip riscv64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/f3/57580cfa28c44acd99f273351f929db1a47c82.debug debian/tabix/usr/bin/bgzip install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/tabix/usr/lib/debug/.dwz/riscv64-linux-gnu debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/tabix/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/tabix/usr/lib/debug install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/share/doc ln -s tabix debian/.debhelper/tabix/dbgsym-root/usr/share/doc/tabix-dbgsym install -m0755 -d debian/.debhelper/tabix make[1]: Leaving directory '/<>' dh_makeshlibs -a rm -f debian/libhts3t64/DEBIAN/shlibs install -m0755 -d debian/libhts3t64/DEBIAN echo "libhts 3 libhts3t64 (>= 1.22.1+ds)" >> debian/libhts3t64/DEBIAN/shlibs chmod 0644 -- debian/libhts3t64/DEBIAN/shlibs dpkg-gensymbols -plibhts3t64 -Idebian/libhts3t64.symbols -Pdebian/libhts3t64 -edebian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below dpkg-gensymbols: warning: debian/libhts3t64/DEBIAN/symbols doesn't match completely debian/libhts3t64.symbols --- debian/libhts3t64.symbols (libhts3t64_1.22.1+ds-1_riscv64) +++ dpkg-gensymbolsJCOibr 2025-08-19 12:47:00.233182418 +0000 @@ -101,6 +101,7 @@ bcf_float_vector_end@HTSLIB_1.0 1.17 bcf_fmt_array@HTSLIB_1.0 1.17 bcf_fmt_sized_array@HTSLIB_1.0 1.17 + bcf_format_gt_v2@Base 1.22.1+ds-1 bcf_get_fmt@HTSLIB_1.0 1.17 bcf_get_fmt_id@HTSLIB_1.1 1.17 bcf_get_format_string@HTSLIB_1.0 1.17 @@ -165,6 +166,7 @@ bcf_remove_allele_set@HTSLIB_1.3 1.17 bcf_remove_alleles@HTSLIB_1.0 1.17 bcf_remove_filter@HTSLIB_1.0 1.17 + bcf_sr_add_hreader@Base 1.22.1+ds-1 bcf_sr_add_reader@HTSLIB_1.0 1.17 bcf_sr_destroy@HTSLIB_1.0 1.17 bcf_sr_destroy_threads@HTSLIB_1.4 1.17 @@ -602,6 +604,7 @@ hts_base_mod_state_free@HTSLIB_1.14 1.17 hts_check_EOF@HTSLIB_1.4 1.17 hts_close@HTSLIB_1.0 1.17 + hts_crc32@Base 1.22.1+ds-1 hts_decode_base64@Base 1.16 hts_decode_percent@Base 1.16 hts_detect_format2@HTSLIB_1.15 1.17 @@ -731,6 +734,7 @@ hts_tpool_result_data@HTSLIB_1.4 1.17 hts_tpool_size@HTSLIB_1.4 1.17 hts_tpool_wake_dispatch@HTSLIB_1.4 1.17 + hts_tpool_worker_id@Base 1.22.1+ds-1 hts_useek@Base 1.16 hts_utell@Base 1.16 hts_verbose@HTSLIB_1.0 1.17 mv debian/.debhelper/generated/libhts3t64/triggers.new debian/.debhelper/generated/libhts3t64/triggers mv debian/libhts3t64.substvars.new debian/libhts3t64.substvars rm -f debian/libhts-dev/DEBIAN/shlibs rm -f debian/tabix/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/libhts3t64/DEBIAN dpkg-shlibdeps -Tdebian/libhts3t64.substvars debian/libhts3t64/usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so debian/libhts3t64/usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged install -m0755 -d debian/tabix/DEBIAN dpkg-shlibdeps -Tdebian/tabix.substvars debian/tabix/usr/bin/tabix debian/tabix/usr/bin/htsfile debian/tabix/usr/bin/bgzip dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dh_installdeb -a install -m0755 -d debian/libhts3t64/DEBIAN install -p -m0644 debian/.debhelper/generated/libhts3t64/triggers debian/libhts3t64/DEBIAN/triggers install -m0755 -d debian/libhts-dev/DEBIAN install -m0755 -d debian/tabix/DEBIAN dh_gencontrol -a install -m0755 -d debian/libhts3t64/DEBIAN echo misc:Depends= >> debian/libhts3t64.substvars echo misc:Pre-Depends= >> debian/libhts3t64.substvars install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN dpkg-gencontrol -plibhts3t64 -ldebian/changelog -Tdebian/libhts3t64.substvars -cdebian/control -Pdebian/.debhelper/libhts3t64/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libhts3t64-dbgsym "-DDepends=libhts3t64 (= \${binary:Version})" "-DDescription=debug symbols for libhts3t64" "-DBuild-Ids=0cd747d76b655d2cde757eb215103c31b284e5b8 20dbd42c2715ddff8271ff5035140a2babf2cbca 45c435bffa7c070d81b509fed67b80a6e2935aea be363bbf600cef37251aca77b4591d157b74fc4e eff0d722fdcbfca14341a9ca974d7dcffc7eb29e" -DSection=debug -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibhts3t64 -ldebian/changelog -Tdebian/libhts3t64.substvars -cdebian/control -Pdebian/libhts3t64 chmod 0644 -- debian/libhts3t64/DEBIAN/control install -m0755 -d debian/libhts-dev/DEBIAN echo misc:Depends= >> debian/libhts-dev.substvars echo misc:Pre-Depends= >> debian/libhts-dev.substvars dpkg-gencontrol -plibhts-dev -ldebian/changelog -Tdebian/libhts-dev.substvars -cdebian/control -Pdebian/libhts-dev chmod 0644 -- debian/libhts-dev/DEBIAN/control install -m0755 -d debian/tabix/DEBIAN echo misc:Depends= >> debian/tabix.substvars echo misc:Pre-Depends= >> debian/tabix.substvars install -m0755 -d debian/.debhelper/tabix/dbgsym-root/DEBIAN dpkg-gencontrol -ptabix -ldebian/changelog -Tdebian/tabix.substvars -cdebian/control -Pdebian/.debhelper/tabix/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=tabix-dbgsym "-DDepends=tabix (= \${binary:Version})" "-DDescription=debug symbols for tabix" "-DBuild-Ids=539111e046996190920d049f1f845f6d147195e4 c2c662f52806898c69056265a869e5bbf98762a5 f357580cfa28c44acd99f273351f929db1a47c82" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptabix -ldebian/changelog -Tdebian/tabix.substvars -cdebian/control -Pdebian/tabix chmod 0644 -- debian/tabix/DEBIAN/control dh_md5sums -a install -m0755 -d debian/libhts3t64/DEBIAN cd debian/libhts3t64 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts3t64/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN cd debian/.debhelper/libhts3t64/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN/md5sums install -m0755 -d debian/libhts-dev/DEBIAN cd debian/libhts-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts-dev/DEBIAN/md5sums install -m0755 -d debian/tabix/DEBIAN cd debian/tabix >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tabix/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tabix/dbgsym-root/DEBIAN cd debian/.debhelper/tabix/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/libhts3t64 .. dpkg-deb: building package 'libhts3t64' in '../libhts3t64_1.22.1+ds-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/libhts3t64/dbgsym-root .. dpkg-deb: building package 'libhts3t64-dbgsym' in '../libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/libhts-dev .. dpkg-deb: building package 'libhts-dev' in '../libhts-dev_1.22.1+ds-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/tabix .. dpkg-deb: building package 'tabix' in '../tabix_1.22.1+ds-1_riscv64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/tabix/dbgsym-root .. dpkg-deb: building package 'tabix-dbgsym' in '../tabix-dbgsym_1.22.1+ds-1_riscv64.deb'. dpkg-genbuildinfo --build=any -O../htslib_1.22.1+ds-1_riscv64.buildinfo dpkg-genchanges --build=any -O../htslib_1.22.1+ds-1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from htslib-1.22.1+ds/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis\.yml|README.md|aclocal.m4|config.h.in|configure)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-08-19T12:47:16Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ --------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ htslib_1.22.1+ds-1_riscv64.changes: ----------------------------------- Format: 1.8 Date: Sun, 17 Aug 2025 21:04:46 +0200 Source: htslib Binary: libhts-dev libhts3t64 libhts3t64-dbgsym tabix tabix-dbgsym Built-For-Profiles: cross nocheck Architecture: riscv64 Version: 1.22.1+ds-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steffen Moeller Description: libhts-dev - development files for the HTSlib libhts3t64 - C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome position files Changes: htslib (1.22.1+ds-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.7.2 (routine-update) * d/copyright: Also excluding config.{guess,sub} Checksums-Sha1: 4c899b5feb611d3cf971d40fb579b53360a38761 7742 htslib_1.22.1+ds-1_riscv64.buildinfo 4f03be03af3f24117ab4894ad06b6ba25d86d03a 3167108 libhts-dev_1.22.1+ds-1_riscv64.deb 568f6a65261c8be620c868e14e72b8c97b49fb4c 1253228 libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb b6d14d6e5c79ee2cf14d240c712772ae5c0391d5 478804 libhts3t64_1.22.1+ds-1_riscv64.deb 3db20a67717f91194ed38553ad67312e46291100 2911612 tabix-dbgsym_1.22.1+ds-1_riscv64.deb 5be5023220a325603f2dd2b6fba744195e178a78 517556 tabix_1.22.1+ds-1_riscv64.deb Checksums-Sha256: 34961701281c521f3b3e4e3d65fd8edfd4923007150997462147b81beeb801e0 7742 htslib_1.22.1+ds-1_riscv64.buildinfo 004a3e3ee4b141301d42dde2bc9908904c05dd941d81431d9b13b9d976c68a53 3167108 libhts-dev_1.22.1+ds-1_riscv64.deb d051550ccd3b829d63ffd9143da59a91ceeb08cc21399e8fe31768d8288058d3 1253228 libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb b71d3a8c96d316aceb4d880ca2720e66e15642d72671f9985b439a7aec0968c0 478804 libhts3t64_1.22.1+ds-1_riscv64.deb 68b567e7ff5a7d819c5af7b122f48b360e6aed939ce03af124e33d8495d30997 2911612 tabix-dbgsym_1.22.1+ds-1_riscv64.deb 8fdaed94cdf96ff0c2a5434358d27d84c23a5c86089792c661b6f66dbcc535f5 517556 tabix_1.22.1+ds-1_riscv64.deb Files: a3350213a635e74cb06375085eccef8c 7742 science optional htslib_1.22.1+ds-1_riscv64.buildinfo f6fbfdc728588127cd722642c52d398f 3167108 libdevel optional libhts-dev_1.22.1+ds-1_riscv64.deb a65f016706acf0aecbec9f8954db5447 1253228 debug optional libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb cf8488606204db2960a9b373f7639c5c 478804 libs optional libhts3t64_1.22.1+ds-1_riscv64.deb 608a5cdfae72f2c4dfbebda07baa6714 2911612 debug optional tabix-dbgsym_1.22.1+ds-1_riscv64.deb 70268297d4e5cffd104d131bb6452748 517556 science optional tabix_1.22.1+ds-1_riscv64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: htslib Binary: libhts-dev libhts3t64 libhts3t64-dbgsym tabix tabix-dbgsym Architecture: riscv64 Version: 1.22.1+ds-1 Checksums-Md5: f6fbfdc728588127cd722642c52d398f 3167108 libhts-dev_1.22.1+ds-1_riscv64.deb a65f016706acf0aecbec9f8954db5447 1253228 libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb cf8488606204db2960a9b373f7639c5c 478804 libhts3t64_1.22.1+ds-1_riscv64.deb 608a5cdfae72f2c4dfbebda07baa6714 2911612 tabix-dbgsym_1.22.1+ds-1_riscv64.deb 70268297d4e5cffd104d131bb6452748 517556 tabix_1.22.1+ds-1_riscv64.deb Checksums-Sha1: 4f03be03af3f24117ab4894ad06b6ba25d86d03a 3167108 libhts-dev_1.22.1+ds-1_riscv64.deb 568f6a65261c8be620c868e14e72b8c97b49fb4c 1253228 libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb b6d14d6e5c79ee2cf14d240c712772ae5c0391d5 478804 libhts3t64_1.22.1+ds-1_riscv64.deb 3db20a67717f91194ed38553ad67312e46291100 2911612 tabix-dbgsym_1.22.1+ds-1_riscv64.deb 5be5023220a325603f2dd2b6fba744195e178a78 517556 tabix_1.22.1+ds-1_riscv64.deb Checksums-Sha256: 004a3e3ee4b141301d42dde2bc9908904c05dd941d81431d9b13b9d976c68a53 3167108 libhts-dev_1.22.1+ds-1_riscv64.deb d051550ccd3b829d63ffd9143da59a91ceeb08cc21399e8fe31768d8288058d3 1253228 libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb b71d3a8c96d316aceb4d880ca2720e66e15642d72671f9985b439a7aec0968c0 478804 libhts3t64_1.22.1+ds-1_riscv64.deb 68b567e7ff5a7d819c5af7b122f48b360e6aed939ce03af124e33d8495d30997 2911612 tabix-dbgsym_1.22.1+ds-1_riscv64.deb 8fdaed94cdf96ff0c2a5434358d27d84c23a5c86089792c661b6f66dbcc535f5 517556 tabix_1.22.1+ds-1_riscv64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 19 Aug 2025 12:47:15 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.2.37-2+b5), binutils (= 2.45-4), binutils-common (= 2.45-4), binutils-x86-64-linux-gnu (= 2.45-4), bsdextrautils (= 2.41.1-1), bsdutils (= 1:2.41.1-1), build-essential (= 12.12), bzip2 (= 1.0.8-6), comerr-dev (= 2.1-1.47.2-3+b3), coreutils (= 9.7-3), cpp (= 4:14.2.0-1), cpp-14 (= 14.3.0-5), cpp-14-x86-64-linux-gnu (= 14.3.0-5), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.25), debianutils (= 5.23.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.3.0-5), g++-14-x86-64-linux-gnu (= 14.3.0-5), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.3.0-5), gcc-14-base (= 14.3.0-5), gcc-14-x86-64-linux-gnu (= 14.3.0-5), gcc-15-base (= 15.2.0-1), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.11-4), groff-base (= 1.23.0-9), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-1), libatomic1 (= 15.2.0-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.5-1), libaudit1 (= 1:4.0.5-1), libbinutils (= 2.45-4), libblkid1 (= 2.41.1-1), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcc1-0 (= 15.2.0-1), libcom-err2 (= 1.47.2-3+b3), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-4), libctf0 (= 2.45-4), libcurl3t64-gnutls (= 8.15.0-1), libcurl4-gnutls-dev (= 8.15.0-1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.25), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libffi8 (= 3.4.8-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.3.0-5), libgcc-s1 (= 15.2.0-1), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.10-2), libgnutls-openssl27t64 (= 3.8.10-2), libgnutls28-dev (= 3.8.10-2), libgnutls30t64 (= 3.8.10-2), libgomp1 (= 15.2.0-1), libgprofng0 (= 2.45-4), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libhogweed6t64 (= 3.10.1-1), libhtscodecs-dev (= 1.6.1-2), libhtscodecs2 (= 1.6.1-2), libhwasan0 (= 15.2.0-1), libidn2-0 (= 2.3.8-3), libidn2-dev (= 2.3.8-3), libisl23 (= 0.27-1), libitm1 (= 15.2.0-1), libjansson4 (= 2.14-2+b3), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblastlog2-2 (= 2.41.1-1), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblsan0 (= 15.2.0-1), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.1-1), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.2-1), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp2-dev (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libngtcp2-16 (= 1.11.0-1), libngtcp2-crypto-gnutls-dev (= 1.11.0-1), libngtcp2-crypto-gnutls8 (= 1.11.0-1), libngtcp2-dev (= 1.11.0-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libquadmath0 (= 15.2.0-1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe2 (= 2.45-4), libsmartcols1 (= 2.41.1-1), libsqlite3-0 (= 3.46.1-7), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.2-1), libssl3t64 (= 3.5.2-1), libstdc++-14-dev (= 14.3.0-5), libstdc++6 (= 15.2.0-1), libsystemd0 (= 258~rc2-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-4), libtsan2 (= 15.2.0-1), libubsan1 (= 15.2.0-1), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 258~rc2-2), libunbound8 (= 1.22.0-2), libunistring5 (= 1.3-2), libuuid1 (= 2.41.1-1), libxml2-16 (= 2.14.5+dfsg-0.1), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), linux-libc-dev (= 6.12.38-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), nettle-dev (= 3.10.1-1), openssl-provider-legacy (= 3.5.2-1), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), util-linux (= 2.41.1-1), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1755457486" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libhts-dev_1.22.1+ds-1_riscv64.deb ---------------------------------- new Debian package, version 2.0. size 3167108 bytes: control archive=2020 bytes. 1235 bytes, 27 lines control 2422 bytes, 37 lines md5sums Package: libhts-dev Source: htslib Version: 1.22.1+ds-1 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 31514 Depends: libbz2-dev, libhts3t64 (= 1.22.1+ds-1), libcurl4-gnutls-dev, libdeflate-dev, liblzma-dev, zlib1g-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/samtools/htslib Description: development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix. drwxr-xr-x root/root 0 2025-08-17 19:04 ./ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/include/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/include/htslib/ -rw-r--r-- root/root 17826 2025-02-15 22:49 ./usr/include/htslib/bgzf.h -rw-r--r-- root/root 24614 2024-08-15 14:18 ./usr/include/htslib/cram.h -rw-r--r-- root/root 15122 2023-07-20 15:01 ./usr/include/htslib/faidx.h -rw-r--r-- root/root 13578 2023-09-08 16:43 ./usr/include/htslib/hfile.h -rw-r--r-- root/root 57861 2025-07-14 11:11 ./usr/include/htslib/hts.h -rw-r--r-- root/root 4617 2025-04-17 08:47 ./usr/include/htslib/hts_defs.h -rw-r--r-- root/root 11729 2023-08-24 15:40 ./usr/include/htslib/hts_endian.h -rw-r--r-- root/root 5991 2022-07-14 09:33 ./usr/include/htslib/hts_expr.h -rw-r--r-- root/root 3958 2022-05-13 15:25 ./usr/include/htslib/hts_log.h -rw-r--r-- root/root 2842 2022-01-11 12:11 ./usr/include/htslib/hts_os.h -rw-r--r-- root/root 5605 2020-01-23 10:28 ./usr/include/htslib/kbitset.h -rw-r--r-- root/root 2828 2019-11-19 11:20 ./usr/include/htslib/kfunc.h -rw-r--r-- root/root 26655 2024-06-20 09:10 ./usr/include/htslib/khash.h -rw-r--r-- root/root 4050 2020-08-10 08:46 ./usr/include/htslib/khash_str2int.h -rw-r--r-- root/root 5189 2023-10-03 15:40 ./usr/include/htslib/klist.h -rw-r--r-- root/root 3733 2022-07-27 10:31 ./usr/include/htslib/knetfile.h -rw-r--r-- root/root 3295 2020-08-27 10:09 ./usr/include/htslib/kroundup.h -rw-r--r-- root/root 9357 2023-10-03 15:40 ./usr/include/htslib/kseq.h -rw-r--r-- root/root 11507 2022-08-16 10:42 ./usr/include/htslib/ksort.h -rw-r--r-- root/root 14148 2025-02-16 23:19 ./usr/include/htslib/kstring.h -rw-r--r-- root/root 8881 2020-07-29 13:09 ./usr/include/htslib/regidx.h -rw-r--r-- root/root 92144 2025-05-28 20:46 ./usr/include/htslib/sam.h -rw-r--r-- root/root 17408 2024-12-20 21:02 ./usr/include/htslib/synced_bcf_reader.h -rw-r--r-- root/root 4992 2024-03-26 10:03 ./usr/include/htslib/tbx.h -rw-r--r-- root/root 12969 2025-01-20 16:14 ./usr/include/htslib/thread_pool.h -rw-r--r-- root/root 68750 2025-03-24 10:41 ./usr/include/htslib/vcf.h -rw-r--r-- root/root 1686 2020-07-11 11:34 ./usr/include/htslib/vcf_sweep.h -rw-r--r-- root/root 4919 2020-09-16 09:17 ./usr/include/htslib/vcfutils.h drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/ -rw-r--r-- root/root 31723918 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/libhts.a lrwxrwxrwx root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/libhts.so -> libhts.so.1.22.1 drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 672 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/pkgconfig/htslib.pc drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/libhts-dev/ -rw-r--r-- root/root 2680 2021-04-12 09:37 ./usr/share/doc/libhts-dev/README -rw-r--r-- root/root 2961 2019-12-10 17:59 ./usr/share/doc/libhts-dev/README.large_positions.md.gz -rw-r--r-- root/root 401 2025-08-17 19:03 ./usr/share/doc/libhts-dev/README.test -rw-r--r-- root/root 4182 2025-08-17 19:04 ./usr/share/doc/libhts-dev/changelog.Debian.gz -rw-r--r-- root/root 41299 2025-07-14 11:11 ./usr/share/doc/libhts-dev/changelog.gz -rw-r--r-- root/root 5925 2025-08-17 19:04 ./usr/share/doc/libhts-dev/copyright drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 152 2025-08-17 19:03 ./usr/share/lintian/overrides/libhts-dev libhts3t64-dbgsym_1.22.1+ds-1_riscv64.deb ----------------------------------------- new Debian package, version 2.0. size 1253228 bytes: control archive=820 bytes. 570 bytes, 13 lines control 618 bytes, 6 lines md5sums Package: libhts3t64-dbgsym Source: htslib Version: 1.22.1+ds-1 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 1326 Depends: libhts3t64 (= 1.22.1+ds-1) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libhts3t64 Build-Ids: 0cd747d76b655d2cde757eb215103c31b284e5b8 20dbd42c2715ddff8271ff5035140a2babf2cbca 45c435bffa7c070d81b509fed67b80a6e2935aea be363bbf600cef37251aca77b4591d157b74fc4e eff0d722fdcbfca14341a9ca974d7dcffc7eb29e drwxr-xr-x root/root 0 2025-08-17 19:04 ./ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/0c/ -rw-r--r-- root/root 14552 2025-08-17 19:04 ./usr/lib/debug/.build-id/0c/d747d76b655d2cde757eb215103c31b284e5b8.debug drwxr-xr-x 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root/root 0 2025-08-17 19:04 ./usr/share/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-08-17 19:04 ./usr/share/doc/libhts3t64-dbgsym -> libhts3t64 libhts3t64_1.22.1+ds-1_riscv64.deb ---------------------------------- new Debian package, version 2.0. size 478804 bytes: control archive=6184 bytes. 1303 bytes, 24 lines control 888 bytes, 12 lines md5sums 35 bytes, 1 lines shlibs 30757 bytes, 948 lines symbols 66 bytes, 2 lines triggers Package: libhts3t64 Source: htslib Version: 1.22.1+ds-1 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 944 Depends: libbz2-1.0, libc6 (>= 2.34), libcurl3t64-gnutls (>= 7.18.0), libdeflate0 (>= 1.0), libhtscodecs2 (>= 1.3.0), liblzma5 (>= 5.1.1alpha+20120614), libssl3t64 (>= 3.0.0), zlib1g (>= 1:1.1.4) Breaks: ivar (<< 1.3.1~), libhts-dev (<< 1.13~), libhts3 (<< 1.22.1+ds-1), libtabixpp (<< 1.0.0-5~), samtools (<< 1.17~) Replaces: libhts-dev (<< 1.13~), libhts3 Provides: libhts3 (= 1.22.1+ds-1) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/samtools/htslib Description: C library for high-throughput sequencing data formats HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. drwxr-xr-x root/root 0 2025-08-17 19:04 ./ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/htslib/ -rw-r--r-- root/root 10304 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/htslib/hfile_gcs.so -rw-r--r-- root/root 26688 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/htslib/hfile_libcurl.so -rw-r--r-- root/root 30784 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/htslib/hfile_s3.so -rw-r--r-- root/root 18496 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/htslib/hfile_s3_write.so -rw-r--r-- root/root 764056 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/libhts.so.1.22.1 lrwxrwxrwx root/root 0 2025-08-17 19:04 ./usr/lib/riscv64-linux-gnu/libhts.so.3 -> libhts.so.1.22.1 drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/libhts3t64/ -rw-r--r-- root/root 4182 2025-08-17 19:04 ./usr/share/doc/libhts3t64/changelog.Debian.gz -rw-r--r-- root/root 41299 2025-07-14 11:11 ./usr/share/doc/libhts3t64/changelog.gz -rw-r--r-- root/root 5925 2025-08-17 19:04 ./usr/share/doc/libhts3t64/copyright drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/man/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/man/man5/ -rw-r--r-- root/root 2452 2025-08-17 19:04 ./usr/share/man/man5/faidx.5.gz -rw-r--r-- root/root 1537 2025-08-17 19:04 ./usr/share/man/man5/sam.5.gz -rw-r--r-- root/root 1857 2025-08-17 19:04 ./usr/share/man/man5/vcf.5.gz drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/man/man7/ -rw-r--r-- root/root 3418 2025-08-17 19:04 ./usr/share/man/man7/htslib-s3-plugin.7.gz tabix-dbgsym_1.22.1+ds-1_riscv64.deb ------------------------------------ new Debian package, version 2.0. size 2911612 bytes: control archive=700 bytes. 456 bytes, 12 lines control 401 bytes, 4 lines md5sums Package: tabix-dbgsym Source: htslib Version: 1.22.1+ds-1 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 4881 Depends: tabix (= 1.22.1+ds-1) Section: debug Priority: optional Description: debug symbols for tabix Build-Ids: 539111e046996190920d049f1f845f6d147195e4 c2c662f52806898c69056265a869e5bbf98762a5 f357580cfa28c44acd99f273351f929db1a47c82 drwxr-xr-x root/root 0 2025-08-17 19:04 ./ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/53/ -rw-r--r-- root/root 1774400 2025-08-17 19:04 ./usr/lib/debug/.build-id/53/9111e046996190920d049f1f845f6d147195e4.debug drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/c2/ -rw-r--r-- root/root 1728616 2025-08-17 19:04 ./usr/lib/debug/.build-id/c2/c662f52806898c69056265a869e5bbf98762a5.debug drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.build-id/f3/ -rw-r--r-- root/root 1400192 2025-08-17 19:04 ./usr/lib/debug/.build-id/f3/57580cfa28c44acd99f273351f929db1a47c82.debug drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/lib/debug/.dwz/riscv64-linux-gnu/ -rw-r--r-- root/root 77904 2025-08-17 19:04 ./usr/lib/debug/.dwz/riscv64-linux-gnu/tabix.debug drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-08-17 19:04 ./usr/share/doc/tabix-dbgsym -> tabix tabix_1.22.1+ds-1_riscv64.deb ----------------------------- new Debian package, version 2.0. size 517556 bytes: control archive=1132 bytes. 989 bytes, 20 lines control 545 bytes, 9 lines md5sums Package: tabix Source: htslib Version: 1.22.1+ds-1 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 1943 Depends: libbz2-1.0, libc6 (>= 2.34), libdeflate0 (>= 1.0), libhtscodecs2 (>= 1.3.0), liblzma5 (>= 5.1.1alpha+20120614), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/samtools/htslib Description: generic indexer for TAB-delimited genome position files Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name. . This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools. drwxr-xr-x root/root 0 2025-08-17 19:04 ./ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/bin/ -rwxr-xr-x root/root 555480 2025-08-17 19:04 ./usr/bin/bgzip -rwxr-xr-x root/root 670232 2025-08-17 19:04 ./usr/bin/htsfile -rwxr-xr-x root/root 690712 2025-08-17 19:04 ./usr/bin/tabix drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/doc/tabix/ -rw-r--r-- root/root 4181 2025-08-17 19:04 ./usr/share/doc/tabix/changelog.Debian.gz -rw-r--r-- root/root 41299 2025-07-14 11:11 ./usr/share/doc/tabix/changelog.gz -rw-r--r-- root/root 5925 2025-08-17 19:04 ./usr/share/doc/tabix/copyright drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/man/ drwxr-xr-x root/root 0 2025-08-17 19:04 ./usr/share/man/man1/ -rw-r--r-- root/root 3064 2025-08-17 19:04 ./usr/share/man/man1/bgzip.1.gz -rw-r--r-- root/root 1919 2025-08-17 19:04 ./usr/share/man/man1/htsfile.1.gz -rw-r--r-- root/root 3422 2025-08-17 19:04 ./usr/share/man/man1/tabix.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1437 B] Get:5 copy:/<>/apt_archive ./ Packages [1520 B] Fetched 3572 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The solver encountered an error of type: Execute external solver... ERR_UNSOLVABLE The following information might help you to understand what is wrong: Unsatisfied dependencies: libpsl5t64 : Depends: libidn2-0 (>= 0.16) but it is not going to be installed libcurl3t64-gnutls : Depends: libidn2-0 (>= 2.0.0) but it is not going to be installed Depends: librtmp1 (>= 2.3) but it is not going to be installed libgnutls30t64 : Depends: libidn2-0 (>= 2.0.0) but it is not going to be installed Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: sbuild-build-depends-lintian-dummy:riscv64 : Depends: lintian:amd64 E: External solver failed with: Unsatisfied dependencies: apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 128 Distribution: unstable Foreign Architectures: riscv64 Host Architecture: riscv64 Install-Time: 13 Job: htslib_1.22.1+ds-1 Lintian: error Machine Architecture: amd64 Package: htslib Package-Time: 151 Source-Version: 1.22.1+ds-1 Space: n/a Status: successful Version: 1.22.1+ds-1 -------------------------------------------------------------------------------- Finished at 2025-08-19T12:47:16Z Build needed 00:02:31, no disk space