sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on mjolnir.einval.org +==============================================================================+ | htslib 1.24-3 (i386) Thu, 24 Sep 2026 19:20:10 +0000 | +==============================================================================+ Package: htslib Version: 1.24-3 Source Version: 1.24-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.be8SxFJR4N... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Thu, 24 Sep 2026 19:20:27 +0000 | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [193 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [12.0 MB] Get:3 http://mirror.einval.org/debian unstable/main i386 Packages [10.4 MB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [10.7 MB] Fetched 33.3 MB in 8s (4336 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: init-system-helpers libsystemd0 libudev1 linux-libc-dev mawk 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2723 kB of archives. After this operation, 17.4 kB of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 init-system-helpers all 1.69+nmu3 [37.3 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 libsystemd0 arm64 262-1 [431 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libudev1 arm64 262-1 [130 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 mawk arm64 1.3.4.20260302-2 [134 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 7.2.7-1 [1991 kB] Fetched 2723 kB in 0s (43.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12174 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.69+nmu3_all.deb ... Unpacking init-system-helpers (1.69+nmu3) over (1.69+nmu2) ... Setting up init-system-helpers (1.69+nmu3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12174 files and directories currently installed.) Preparing to unpack .../libsystemd0_262-1_arm64.deb ... Unpacking libsystemd0:arm64 (262-1) over (262~rc3-1) ... Setting up libsystemd0:arm64 (262-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12174 files and directories currently installed.) Preparing to unpack .../libudev1_262-1_arm64.deb ... Unpacking libudev1:arm64 (262-1) over (262~rc3-1) ... Setting up libudev1:arm64 (262-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12174 files and directories currently installed.) Preparing to unpack .../mawk_1.3.4.20260302-2_arm64.deb ... Unpacking mawk (1.3.4.20260302-2) over (1.3.4.20260302-1) ... Preparing to unpack .../linux-libc-dev_7.2.7-1_all.deb ... Unpacking linux-libc-dev (7.2.7-1) over (7.2.6-1) ... Setting up linux-libc-dev (7.2.7-1) ... Setting up mawk (1.3.4.20260302-2) ... Processing triggers for libc-bin (2.43-6) ... +------------------------------------------------------------------------------+ | Fetch source files Thu, 24 Sep 2026 19:20:46 +0000 | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'htslib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/htslib.git Please use: git clone https://salsa.debian.org/med-team/htslib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1882 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main htslib 1.24-3 (dsc) [2428 B] Get:2 http://mirror.einval.org/debian unstable/main htslib 1.24-3 (tar) [1858 kB] Get:3 http://mirror.einval.org/debian unstable/main htslib 1.24-3 (diff) [21.8 kB] Fetched 1882 kB in 0s (17.3 MB/s) Download complete and in download only mode +------------------------------------------------------------------------------+ | Install package build dependencies Thu, 24 Sep 2026 19:20:48 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 14), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-i386:arm64, apt-utils:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 14), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-i386:arm64, apt-utils:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-cheBIP/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Release [609 B] Ign:3 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Sources [838 B] Get:5 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Packages [880 B] Fetched 2327 B in 0s (106 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils comerr-dev:i386 cpp-16-i686-linux-gnu cpp-i686-linux-gnu crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dwz file g++-16-i686-linux-gnu g++-i686-linux-gnu gcc-16-base:i386 gcc-16-cross-base gcc-16-i686-linux-gnu gcc-16-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:i386 libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli-dev:i386 libbrotli1:i386 libbz2-1.0:i386 libbz2-dev:i386 libc-gconv-modules-extra:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libcurl4-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3t64:i386 libdebhelper-perl libdeflate-dev:i386 libdeflate0:i386 libelf1t64 libevent-2.1-7t64:i386 libffi8:i386 libfile-stripnondeterminism-perl libgcc-16-dev:i386 libgcc-16-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp-dev:i386 libgmp10:i386 libgmpxx4ldbl:i386 libgnutls-dane0t64:i386 libgnutls28-dev:i386 libgnutls30t64:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libgssrpc4t64:i386 libhogweed6t64:i386 libhtscodecs-dev:i386 libhtscodecs2:i386 libidn2-0:i386 libidn2-dev:i386 libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkadm5clnt-mit12:i386 libkadm5srv-mit12:i386 libkdb5-10t64:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5-dev:i386 libkrb5support0:i386 libldap-dev:i386 libldap2:i386 liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1t64 libnettle8t64:i386 libnghttp2-14:i386 libnghttp2-dev:i386 libnghttp3-9:i386 libnghttp3-dev:i386 libngtcp2-16:i386 libngtcp2-crypto-gnutls-dev:i386 libngtcp2-crypto-gnutls8:i386 libngtcp2-dev:i386 libp11-kit-dev:i386 libp11-kit0:i386 libpipeline1 libpkgconf7 libpsl-dev:i386 libpsl5t64:i386 libquadmath0:i386 libquadmath0-i386-cross librtmp-dev:i386 librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libssh2-1-dev:i386 libssh2-1t64:i386 libssl-dev:i386 libssl3t64:i386 libstdc++-16-dev:i386 libstdc++-16-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libtasn1-6:i386 libtasn1-6-dev:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunbound8:i386 libunistring-dev:i386 libunistring5 libunistring5:i386 libxml2-16 libzstd-dev:i386 libzstd1:i386 linux-libc-dev-i386-cross m4 man-db nettle-dev:i386 pkgconf:i386 pkgconf-bin po-debconf sensible-utils zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc doc-base:i386 gcc-16-locales cpp-16-doc cpp-doc dh-make gcc-16-doc manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff krb5-doc:i386 glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 manpages-dev:i386 libcurl4-doc:i386 libidn-dev:i386 gmp-doc:i386 libgmp10-doc:i386 libmpfr-dev:i386 dns-root-data:i386 gnutls-bin:i386 gnutls-doc:i386 krb5-user:i386 liblzma-doc:i386 libnghttp2-doc:i386 p11-kit-doc:i386 libssl-doc:i386 libstdc++-16-doc:i386 libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx python3:any python3-requests bzip2-doc:i386 ca-certificates:i386 libarchive-cpio-perl krb5-locales:i386 libldap-common:i386 publicsuffix:i386 libsasl2-modules:i386 libtasn1-doc:i386 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils comerr-dev:i386 cpp-16-i686-linux-gnu cpp-i686-linux-gnu crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dwz file g++-16-i686-linux-gnu g++-i686-linux-gnu gcc-16-base:i386 gcc-16-cross-base gcc-16-i686-linux-gnu gcc-16-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:i386 libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli-dev:i386 libbrotli1:i386 libbz2-1.0:i386 libbz2-dev:i386 libc-gconv-modules-extra:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libcurl4-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3t64:i386 libdebhelper-perl libdeflate-dev:i386 libdeflate0:i386 libelf1t64 libevent-2.1-7t64:i386 libffi8:i386 libfile-stripnondeterminism-perl libgcc-16-dev:i386 libgcc-16-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp-dev:i386 libgmp10:i386 libgmpxx4ldbl:i386 libgnutls-dane0t64:i386 libgnutls28-dev:i386 libgnutls30t64:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libgssrpc4t64:i386 libhogweed6t64:i386 libhtscodecs-dev:i386 libhtscodecs2:i386 libidn2-0:i386 libidn2-dev:i386 libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkadm5clnt-mit12:i386 libkadm5srv-mit12:i386 libkdb5-10t64:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5-dev:i386 libkrb5support0:i386 libldap-dev:i386 libldap2:i386 liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1t64 libnettle8t64:i386 libnghttp2-14:i386 libnghttp2-dev:i386 libnghttp3-9:i386 libnghttp3-dev:i386 libngtcp2-16:i386 libngtcp2-crypto-gnutls-dev:i386 libngtcp2-crypto-gnutls8:i386 libngtcp2-dev:i386 libp11-kit-dev:i386 libp11-kit0:i386 libpipeline1 libpkgconf7 libpsl-dev:i386 libpsl5t64:i386 libquadmath0:i386 libquadmath0-i386-cross librtmp-dev:i386 librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libssh2-1-dev:i386 libssh2-1t64:i386 libssl-dev:i386 libssl3t64:i386 libstdc++-16-dev:i386 libstdc++-16-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libtasn1-6:i386 libtasn1-6-dev:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunbound8:i386 libunistring-dev:i386 libunistring5 libunistring5:i386 libxml2-16 libzstd-dev:i386 libzstd1:i386 linux-libc-dev-i386-cross m4 man-db nettle-dev:i386 pkgconf:i386 pkgconf-bin po-debconf sbuild-build-depends-main-dummy:i386 sensible-utils zlib1g:i386 zlib1g-dev:i386 0 upgraded, 140 newly installed, 0 to remove and 0 not upgraded. Need to get 118 MB of archives. After this operation, 454 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.47-4 [345 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.47-4 [104 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.47-4 [43.2 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 1.0-5 [328 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b2 [69.1 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.24.1-1 [1270 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.42.3-1 [99.1 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-3 [47.2 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.73-2 [516 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.19-2 [891 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autopoint all 1.0-5 [820 kB] Get:17 http://mirror.einval.org/debian unstable/main i386 gcc-16-base i386 16.2.0-3 [38.7 kB] Get:18 http://mirror.einval.org/debian unstable/main i386 libgcc-s1 i386 16.2.0-3 [87.7 kB] Get:19 http://mirror.einval.org/debian unstable/main i386 libc-gconv-modules-extra i386 2.43-6 [1100 kB] Get:20 http://mirror.einval.org/debian unstable/main i386 libc6 i386 2.43-6 [1737 kB] Get:21 http://mirror.einval.org/debian unstable/main i386 libc6-dev i386 2.43-6 [1886 kB] Get:22 http://mirror.einval.org/debian unstable/main i386 libcom-err2 i386 1.47.4-1+b1 [19.9 kB] Get:23 http://mirror.einval.org/debian unstable/main i386 comerr-dev i386 2.1-1.47.4-1+b1 [51.8 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-16-i686-linux-gnu-base arm64 16.2.0-3cross1 [38.9 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 cpp-16-i686-linux-gnu arm64 16.2.0-3cross1 [11.7 MB] Get:26 http://mirror.einval.org/debian unstable/main arm64 cpp-i686-linux-gnu arm64 4:16.1.0-3 [4464 B] Get:27 http://mirror.einval.org/debian unstable/main arm64 binutils-i686-linux-gnu arm64 2.47-6 [1527 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 gcc-16-cross-base all 16.2.0-3cross1 [34.4 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libc6-i386-cross all 2.43-3cross8 [1496 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-i386-cross all 16.2.0-3cross1 [87.7 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libgomp1-i386-cross all 16.2.0-3cross1 [153 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libitm1-i386-cross all 16.2.0-3cross1 [29.0 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libatomic1-i386-cross all 16.2.0-3cross1 [8252 B] Get:34 http://mirror.einval.org/debian unstable/main arm64 libasan8-i386-cross all 16.2.0-3cross1 [2727 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-i386-cross all 16.2.0-3cross1 [832 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libubsan1-i386-cross all 16.2.0-3cross1 [1106 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-i386-cross all 16.2.0-3cross1 [230 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libgcc-16-dev-i386-cross all 16.2.0-3cross1 [2654 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 gcc-16-i686-linux-gnu arm64 16.2.0-3cross1 [22.7 MB] Get:40 http://mirror.einval.org/debian unstable/main arm64 gcc-i686-linux-gnu arm64 4:16.1.0-3 [1440 B] Get:41 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-i386-cross all 7.2.7-1 [12.6 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-i386-cross all 2.43-3cross8 [1879 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libstdc++-16-dev-i386-cross all 16.2.0-3cross1 [2749 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 g++-16-i686-linux-gnu arm64 16.2.0-3cross1 [12.8 MB] Get:45 http://mirror.einval.org/debian unstable/main arm64 g++-i686-linux-gnu arm64 4:16.1.0-3 [1192 B] Get:46 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-i386 all 12.12 [3544 B] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 14.5 [77.7 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.6.2-3 [552 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 23 [12.7 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:53 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.196-1 [57.9 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.17-1 [100 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libxml2-16 arm64 2.15.4+dfsg-1 [602 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 1.0-5 [2549 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 debhelper all 14.5 [944 kB] Get:61 http://mirror.einval.org/debian unstable/main i386 libkrb5support0 i386 1.22.1-3 [33.2 kB] Get:62 http://mirror.einval.org/debian unstable/main i386 libk5crypto3 i386 1.22.1-3 [81.7 kB] Get:63 http://mirror.einval.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-6+b2 [9816 B] Get:64 http://mirror.einval.org/debian unstable/main i386 libzstd1 i386 1.5.7+dfsg-4 [304 kB] Get:65 http://mirror.einval.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg+really1.3.2-3 [86.9 kB] Get:66 http://mirror.einval.org/debian unstable/main i386 libssl3t64 i386 3.6.4-1 [2559 kB] Get:67 http://mirror.einval.org/debian unstable/main i386 libkrb5-3 i386 1.22.1-3 [357 kB] Get:68 http://mirror.einval.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.22.1-3 [147 kB] Get:69 http://mirror.einval.org/debian unstable/main i386 libgssrpc4t64 i386 1.22.1-3 [61.6 kB] Get:70 http://mirror.einval.org/debian unstable/main i386 libkadm5clnt-mit12 i386 1.22.1-3 [42.5 kB] Get:71 http://mirror.einval.org/debian unstable/main i386 libkdb5-10t64 i386 1.22.1-3 [44.2 kB] Get:72 http://mirror.einval.org/debian unstable/main i386 libkadm5srv-mit12 i386 1.22.1-3 [56.8 kB] Get:73 http://mirror.einval.org/debian unstable/main i386 krb5-multidev i386 1.22.1-3 [125 kB] Get:74 http://mirror.einval.org/debian unstable/main i386 libasan8 i386 16.2.0-3 [2734 kB] Get:75 http://mirror.einval.org/debian unstable/main i386 libatomic1 i386 16.2.0-3 [8156 B] Get:76 http://mirror.einval.org/debian unstable/main i386 libbrotli1 i386 1.2.0-4+b1 [309 kB] Get:77 http://mirror.einval.org/debian unstable/main i386 libbrotli-dev i386 1.2.0-4+b1 [314 kB] Get:78 http://mirror.einval.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-6+b2 [37.5 kB] Get:79 http://mirror.einval.org/debian unstable/main i386 libbz2-dev i386 1.0.8-6+b2 [31.7 kB] Get:80 http://mirror.einval.org/debian unstable/main i386 libnghttp3-9 i386 1.17.0-1 [80.6 kB] Get:81 http://mirror.einval.org/debian unstable/main i386 libngtcp2-16 i386 1.24.0-1 [182 kB] Get:82 http://mirror.einval.org/debian unstable/main i386 libgmp10 i386 2:6.3.0+dfsg-5+b2 [570 kB] Get:83 http://mirror.einval.org/debian unstable/main i386 libnettle8t64 i386 3.10.2-1+b1 [317 kB] Get:84 http://mirror.einval.org/debian unstable/main i386 libhogweed6t64 i386 3.10.2-1+b1 [338 kB] Get:85 http://mirror.einval.org/debian unstable/main i386 libunistring5 i386 1.4.2-1 [473 kB] Get:86 http://mirror.einval.org/debian unstable/main i386 libidn2-0 i386 2.3.8-5 [110 kB] Get:87 http://mirror.einval.org/debian unstable/main i386 libffi8 i386 3.8.0-2 [27.7 kB] Get:88 http://mirror.einval.org/debian unstable/main i386 libp11-kit0 i386 0.26.5-1 [460 kB] Get:89 http://mirror.einval.org/debian unstable/main i386 libtasn1-6 i386 4.21.0-2+b1 [51.1 kB] Get:90 http://mirror.einval.org/debian unstable/main i386 libgnutls30t64 i386 3.8.13-1 [1537 kB] Get:91 http://mirror.einval.org/debian unstable/main i386 libdb5.3t64 i386 5.3.28+dfsg2-11+b1 [767 kB] Get:92 http://mirror.einval.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-11 [18.1 kB] Get:93 http://mirror.einval.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-11 [58.7 kB] Get:94 http://mirror.einval.org/debian unstable/main i386 libldap2 i386 2.6.14+dfsg-2 [209 kB] Get:95 http://mirror.einval.org/debian unstable/main i386 libnghttp2-14 i386 1.70.0-1 [99.2 kB] Get:96 http://mirror.einval.org/debian unstable/main i386 libngtcp2-crypto-gnutls8 i386 1.24.0-1 [24.5 kB] Get:97 http://mirror.einval.org/debian unstable/main i386 libpsl5t64 i386 0.23.3-1 [62.2 kB] Get:98 http://mirror.einval.org/debian unstable/main i386 libssh2-1t64 i386 1.11.1-6 [260 kB] Get:99 http://mirror.einval.org/debian unstable/main i386 libcurl4-gnutls i386 8.23.0~rc1-2 [503 kB] Get:100 http://mirror.einval.org/debian unstable/main i386 libevent-2.1-7t64 i386 2.1.13-stable-1 [196 kB] Get:101 http://mirror.einval.org/debian unstable/main i386 libunbound8 i386 1.26.1-1 [689 kB] Get:102 http://mirror.einval.org/debian unstable/main i386 libgnutls-dane0t64 i386 3.8.13-1 [495 kB] Get:103 http://mirror.einval.org/debian unstable/main i386 libidn2-dev i386 2.3.8-5 [104 kB] Get:104 http://mirror.einval.org/debian unstable/main i386 libp11-kit-dev i386 0.26.5-1 [226 kB] Get:105 http://mirror.einval.org/debian unstable/main i386 libtasn1-6-dev i386 4.21.0-2+b1 [102 kB] Get:106 http://mirror.einval.org/debian unstable/main i386 libstdc++6 i386 16.2.0-3 [857 kB] Get:107 http://mirror.einval.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-5+b2 [329 kB] Get:108 http://mirror.einval.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-5+b2 [658 kB] Get:109 http://mirror.einval.org/debian unstable/main i386 nettle-dev i386 3.10.2-1+b1 [1336 kB] Get:110 http://mirror.einval.org/debian unstable/main i386 libgnutls28-dev i386 3.8.13-1 [1535 kB] Get:111 http://mirror.einval.org/debian unstable/main i386 libkrb5-dev i386 1.22.1-3 [14.0 kB] Get:112 http://mirror.einval.org/debian unstable/main i386 libldap-dev i386 2.6.14+dfsg-2 [337 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libpkgconf7 arm64 2.5.1-4 [45.5 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 pkgconf-bin arm64 2.5.1-4 [35.1 kB] Get:115 http://mirror.einval.org/debian unstable/main i386 pkgconf i386 2.5.1-4 [33.6 kB] Get:116 http://mirror.einval.org/debian unstable/main i386 libnghttp2-dev i386 1.70.0-1 [140 kB] Get:117 http://mirror.einval.org/debian unstable/main i386 libnghttp3-dev i386 1.17.0-1 [110 kB] Get:118 http://mirror.einval.org/debian unstable/main i386 libngtcp2-crypto-gnutls-dev i386 1.24.0-1 [24.9 kB] Get:119 http://mirror.einval.org/debian unstable/main i386 libngtcp2-dev i386 1.24.0-1 [246 kB] Get:120 http://mirror.einval.org/debian unstable/main i386 libunistring-dev i386 1.4.2-1 [647 kB] Get:121 http://mirror.einval.org/debian unstable/main i386 libpsl-dev i386 0.23.3-1 [30.1 kB] Get:122 http://mirror.einval.org/debian unstable/main i386 librtmp1 i386 2.6-1 [62.3 kB] Get:123 http://mirror.einval.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.2-3 [915 kB] Get:124 http://mirror.einval.org/debian unstable/main i386 librtmp-dev i386 2.6-1 [72.5 kB] Get:125 http://mirror.einval.org/debian unstable/main i386 libssl-dev i386 3.6.4-1 [3154 kB] Get:126 http://mirror.einval.org/debian unstable/main i386 libssh2-1-dev i386 1.11.1-6 [411 kB] Get:127 http://mirror.einval.org/debian unstable/main i386 libzstd-dev i386 1.5.7+dfsg-4 [372 kB] Get:128 http://mirror.einval.org/debian unstable/main i386 libcurl4-gnutls-dev i386 8.23.0~rc1-2 [653 kB] Get:129 http://mirror.einval.org/debian unstable/main i386 libdeflate0 i386 1.25-1 [46.8 kB] Get:130 http://mirror.einval.org/debian unstable/main i386 libdeflate-dev i386 1.25-1 [55.9 kB] Get:131 http://mirror.einval.org/debian unstable/main i386 libgomp1 i386 16.2.0-3 [153 kB] Get:132 http://mirror.einval.org/debian unstable/main i386 libitm1 i386 16.2.0-3 [29.0 kB] Get:133 http://mirror.einval.org/debian unstable/main i386 libubsan1 i386 16.2.0-3 [1107 kB] Get:134 http://mirror.einval.org/debian unstable/main i386 libquadmath0 i386 16.2.0-3 [230 kB] Get:135 http://mirror.einval.org/debian unstable/main i386 libgcc-16-dev i386 16.2.0-3 [2662 kB] Get:136 http://mirror.einval.org/debian unstable/main i386 libhtscodecs2 i386 1.6.7-1 [72.0 kB] Get:137 http://mirror.einval.org/debian unstable/main i386 libhtscodecs-dev i386 1.6.7-1 [2976 kB] Get:138 http://mirror.einval.org/debian unstable/main i386 liblzma5 i386 5.8.4-1 [364 kB] Get:139 http://mirror.einval.org/debian unstable/main i386 liblzma-dev i386 5.8.4-1 [402 kB] Get:140 http://mirror.einval.org/debian unstable/main i386 libstdc++-16-dev i386 16.2.0-3 [2769 kB] Preconfiguring packages ... Fetched 118 MB in 1s (91.4 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 12174 files and directories currently installed.) Preparing to unpack .../000-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../001-libmagic-mgc_1%3a5.47-4_arm64.deb ... Unpacking libmagic-mgc (1:5.47-4) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../002-libmagic1t64_1%3a5.47-4_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.47-4) ... Selecting previously unselected package file. Preparing to unpack .../003-file_1%3a5.47-4_arm64.deb ... Unpacking file (1:5.47-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../004-gettext-base_1.0-5_arm64.deb ... Unpacking gettext-base (1.0-5) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../005-libuchardet0_0.0.8-2+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../006-groff-base_1.24.1-1_arm64.deb ... Unpacking groff-base (1.24.1-1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../007-bsdextrautils_2.42.3-1_arm64.deb ... Unpacking bsdextrautils (2.42.3-1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../008-libpipeline1_1.5.8-3_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-3) ... Selecting previously unselected package man-db. Preparing to unpack .../009-man-db_2.13.1-1+b1_arm64.deb ... Unpacking man-db (2.13.1-1+b1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.21-1_arm64.deb ... Unpacking m4 (1.4.21-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.73-2_all.deb ... Unpacking autoconf (2.73-2) ... Selecting previously unselected package autotools-dev. 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Preparing to unpack .../018-libc6_2.43-6_i386.deb ... Unpacking libc6:i386 (2.43-6) ... Selecting previously unselected package libc6-dev:i386. Preparing to unpack .../019-libc6-dev_2.43-6_i386.deb ... Unpacking libc6-dev:i386 (2.43-6) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../020-libcom-err2_1.47.4-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.4-1+b1) ... Selecting previously unselected package comerr-dev:i386. Preparing to unpack .../021-comerr-dev_2.1-1.47.4-1+b1_i386.deb ... Unpacking comerr-dev:i386 (2.1-1.47.4-1+b1) ... Selecting previously unselected package gcc-16-i686-linux-gnu-base:arm64. Preparing to unpack .../022-gcc-16-i686-linux-gnu-base_16.2.0-3cross1_arm64.deb ... Unpacking gcc-16-i686-linux-gnu-base:arm64 (16.2.0-3cross1) ... Selecting previously unselected package cpp-16-i686-linux-gnu. Preparing to unpack .../023-cpp-16-i686-linux-gnu_16.2.0-3cross1_arm64.deb ... Unpacking cpp-16-i686-linux-gnu (16.2.0-3cross1) ... Selecting previously unselected package cpp-i686-linux-gnu. Preparing to unpack .../024-cpp-i686-linux-gnu_4%3a16.1.0-3_arm64.deb ... Unpacking cpp-i686-linux-gnu (4:16.1.0-3) ... Selecting previously unselected package binutils-i686-linux-gnu. Preparing to unpack .../025-binutils-i686-linux-gnu_2.47-6_arm64.deb ... Unpacking binutils-i686-linux-gnu (2.47-6) ... Selecting previously unselected package gcc-16-cross-base. Preparing to unpack .../026-gcc-16-cross-base_16.2.0-3cross1_all.deb ... Unpacking gcc-16-cross-base (16.2.0-3cross1) ... Selecting previously unselected package libc6-i386-cross. Preparing to unpack .../027-libc6-i386-cross_2.43-3cross8_all.deb ... Unpacking libc6-i386-cross (2.43-3cross8) ... Selecting previously unselected package libgcc-s1-i386-cross. Preparing to unpack .../028-libgcc-s1-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libgcc-s1-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libgomp1-i386-cross. Preparing to unpack .../029-libgomp1-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libgomp1-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libitm1-i386-cross. Preparing to unpack .../030-libitm1-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libitm1-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libatomic1-i386-cross. Preparing to unpack .../031-libatomic1-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libatomic1-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libasan8-i386-cross. Preparing to unpack .../032-libasan8-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libasan8-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libstdc++6-i386-cross. Preparing to unpack .../033-libstdc++6-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libstdc++6-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libubsan1-i386-cross. Preparing to unpack .../034-libubsan1-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libubsan1-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libquadmath0-i386-cross. Preparing to unpack .../035-libquadmath0-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libquadmath0-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package libgcc-16-dev-i386-cross. Preparing to unpack .../036-libgcc-16-dev-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libgcc-16-dev-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package gcc-16-i686-linux-gnu. Preparing to unpack .../037-gcc-16-i686-linux-gnu_16.2.0-3cross1_arm64.deb ... Unpacking gcc-16-i686-linux-gnu (16.2.0-3cross1) ... Selecting previously unselected package gcc-i686-linux-gnu. Preparing to unpack .../038-gcc-i686-linux-gnu_4%3a16.1.0-3_arm64.deb ... Unpacking gcc-i686-linux-gnu (4:16.1.0-3) ... Selecting previously unselected package linux-libc-dev-i386-cross. Preparing to unpack .../039-linux-libc-dev-i386-cross_7.2.7-1_all.deb ... Unpacking linux-libc-dev-i386-cross (7.2.7-1) ... Selecting previously unselected package libc6-dev-i386-cross. Preparing to unpack .../040-libc6-dev-i386-cross_2.43-3cross8_all.deb ... Unpacking libc6-dev-i386-cross (2.43-3cross8) ... Selecting previously unselected package libstdc++-16-dev-i386-cross. Preparing to unpack .../041-libstdc++-16-dev-i386-cross_16.2.0-3cross1_all.deb ... Unpacking libstdc++-16-dev-i386-cross (16.2.0-3cross1) ... Selecting previously unselected package g++-16-i686-linux-gnu. Preparing to unpack .../042-g++-16-i686-linux-gnu_16.2.0-3cross1_arm64.deb ... Unpacking g++-16-i686-linux-gnu (16.2.0-3cross1) ... Selecting previously unselected package g++-i686-linux-gnu. Preparing to unpack .../043-g++-i686-linux-gnu_4%3a16.1.0-3_arm64.deb ... Unpacking g++-i686-linux-gnu (4:16.1.0-3) ... Selecting previously unselected package crossbuild-essential-i386. Preparing to unpack .../044-crossbuild-essential-i386_12.12_all.deb ... Unpacking crossbuild-essential-i386 (12.12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../045-libdebhelper-perl_14.5_all.deb ... Unpacking libdebhelper-perl (14.5) ... Selecting previously unselected package libtool. Preparing to unpack .../046-libtool_2.6.2-3_all.deb ... Unpacking libtool (2.6.2-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../047-dh-autoreconf_23_all.deb ... Unpacking dh-autoreconf (23) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../048-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../049-libfile-stripnondeterminism-perl_1.15.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../050-dh-strip-nondeterminism_1.15.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../051-libelf1t64_0.196-1_arm64.deb ... Unpacking libelf1t64:arm64 (0.196-1) ... Selecting previously unselected package dwz. Preparing to unpack .../052-dwz_0.17-1_arm64.deb ... Unpacking dwz (0.17-1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../053-libunistring5_1.4.2-1_arm64.deb ... Unpacking libunistring5:arm64 (1.4.2-1) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../054-libxml2-16_2.15.4+dfsg-1_arm64.deb ... Unpacking libxml2-16:arm64 (2.15.4+dfsg-1) ... Selecting previously unselected package gettext. Preparing to unpack .../055-gettext_1.0-5_arm64.deb ... Unpacking gettext (1.0-5) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../056-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../057-po-debconf_1.0.22_all.deb ... Unpacking po-debconf (1.0.22) ... Selecting previously unselected package debhelper. Preparing to unpack .../058-debhelper_14.5_all.deb ... Unpacking debhelper (14.5) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../059-libkrb5support0_1.22.1-3_i386.deb ... Unpacking libkrb5support0:i386 (1.22.1-3) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../060-libk5crypto3_1.22.1-3_i386.deb ... Unpacking libk5crypto3:i386 (1.22.1-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../061-libkeyutils1_1.6.3-6+b2_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-6+b2) ... 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Setting up m4 (1.4.21-1) ... Setting up gcc-16-base:i386 (16.2.0-3) ... Setting up file (1:5.47-4) ... Setting up gcc-16-cross-base (16.2.0-3cross1) ... Setting up libelf1t64:arm64 (0.196-1) ... Setting up linux-libc-dev-i386-cross (7.2.7-1) ... Setting up autotools-dev (20240727.1+nmu1) ... Setting up libunistring5:arm64 (1.4.2-1) ... Setting up autopoint (1.0-5) ... Setting up pkgconf-bin (2.5.1-4) ... Setting up autoconf (2.73-2) ... Setting up dwz (0.17-1) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2+b2) ... Setting up libc6-i386-cross (2.43-3cross8) ... Setting up gcc-16-i686-linux-gnu-base:arm64 (16.2.0-3cross1) ... Setting up libquadmath0-i386-cross (16.2.0-3cross1) ... Setting up automake (1:1.19-2) ... update-alternatives: using /usr/bin/automake-1.19 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.1-1) ... Setting up gettext (1.0-5) ... Setting up libtool (2.6.2-3) ... Setting up libatomic1-i386-cross (16.2.0-3cross1) ... Setting up cpp-16-i686-linux-gnu (16.2.0-3cross1) ... Setting up libgomp1-i386-cross (16.2.0-3cross1) ... Setting up libc6-dev-i386-cross (2.43-3cross8) ... Setting up pkgconf:i386 (2.5.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libgcc-s1-i386-cross (16.2.0-3cross1) ... Setting up dh-autoreconf (23) ... Setting up libitm1-i386-cross (16.2.0-3cross1) ... Setting up dh-strip-nondeterminism (1.15.1-1) ... Setting up groff-base (1.24.1-1) ... Setting up cpp-i686-linux-gnu (4:16.1.0-3) ... Setting up po-debconf (1.0.22) ... Setting up man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libasan8-i386-cross (16.2.0-3cross1) ... Setting up libstdc++6-i386-cross (16.2.0-3cross1) ... Setting up debhelper (14.5) ... Setting up libubsan1-i386-cross (16.2.0-3cross1) ... Setting up libgcc-16-dev-i386-cross (16.2.0-3cross1) ... Setting up libstdc++-16-dev-i386-cross (16.2.0-3cross1) ... Setting up gcc-16-i686-linux-gnu (16.2.0-3cross1) ... Setting up gcc-i686-linux-gnu (4:16.1.0-3) ... Setting up g++-16-i686-linux-gnu (16.2.0-3cross1) ... Setting up g++-i686-linux-gnu (4:16.1.0-3) ... Setting up crossbuild-essential-i386 (12.12) ... Setting up libgcc-s1:i386 (16.2.0-3) ... Setting up libc6:i386 (2.43-6) ... Setting up libnghttp3-9:i386 (1.17.0-1) ... Setting up libnghttp3-dev:i386 (1.17.0-1) ... Setting up libdb5.3t64:i386 (5.3.28+dfsg2-11+b1) ... Setting up libffi8:i386 (3.8.0-2) ... Setting up libasan8:i386 (16.2.0-3) ... Setting up libtasn1-6:i386 (4.21.0-2+b1) ... Setting up libc6-dev:i386 (2.43-6) ... Setting up libngtcp2-16:i386 (1.24.0-1) ... Setting up libbz2-1.0:i386 (1.0.8-6+b2) ... Setting up libtasn1-6-dev:i386 (4.21.0-2+b1) ... Setting up libstdc++6:i386 (16.2.0-3) ... Setting up libitm1:i386 (16.2.0-3) ... Setting up libbz2-dev:i386 (1.0.8-6+b2) ... Setting up libhtscodecs2:i386 (1.6.7-1) ... Setting up libzstd1:i386 (1.5.7+dfsg-4) ... Setting up libkeyutils1:i386 (1.6.3-6+b2) ... Setting up libzstd-dev:i386 (1.5.7+dfsg-4) ... Setting up liblzma5:i386 (5.8.4-1) ... Setting up libbrotli1:i386 (1.2.0-4+b1) ... Setting up libnghttp2-14:i386 (1.70.0-1) ... Setting up libdeflate0:i386 (1.25-1) ... Setting up libevent-2.1-7t64:i386 (2.1.13-stable-1) ... Setting up zlib1g:i386 (1:1.3.dfsg+really1.3.2-3) ... Setting up libcom-err2:i386 (1.47.4-1+b1) ... Setting up libngtcp2-dev:i386 (1.24.0-1) ... Setting up libgomp1:i386 (16.2.0-3) ... Setting up libkrb5support0:i386 (1.22.1-3) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-11) ... Setting up libhtscodecs-dev:i386 (1.6.7-1) ... Setting up libnettle8t64:i386 (3.10.2-1+b1) ... Setting up libgmp10:i386 (2:6.3.0+dfsg-5+b2) ... Setting up libquadmath0:i386 (16.2.0-3) ... Setting up libp11-kit0:i386 (0.26.5-1) ... Setting up comerr-dev:i386 (2.1-1.47.4-1+b1) ... Setting up libunistring5:i386 (1.4.2-1) ... Setting up libatomic1:i386 (16.2.0-3) ... Setting up libk5crypto3:i386 (1.22.1-3) ... Setting up liblzma-dev:i386 (5.8.4-1) ... Setting up libubsan1:i386 (16.2.0-3) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.2-3) ... Setting up libhogweed6t64:i386 (3.10.2-1+b1) ... Setting up libdeflate-dev:i386 (1.25-1) ... Setting up libbrotli-dev:i386 (1.2.0-4+b1) ... Setting up libp11-kit-dev:i386 (0.26.5-1) ... Setting up libunistring-dev:i386 (1.4.2-1) ... Setting up libnghttp2-dev:i386 (1.70.0-1) ... Setting up libgcc-16-dev:i386 (16.2.0-3) ... Setting up libssl3t64:i386 (3.6.4-1) ... Setting up libidn2-0:i386 (2.3.8-5) ... Setting up libunbound8:i386 (1.26.1-1) ... Setting up libgmpxx4ldbl:i386 (2:6.3.0+dfsg-5+b2) ... Setting up libstdc++-16-dev:i386 (16.2.0-3) ... Setting up libssl-dev:i386 (3.6.4-1) ... Setting up libidn2-dev:i386 (2.3.8-5) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-11) ... Setting up libkrb5-3:i386 (1.22.1-3) ... Setting up libssh2-1t64:i386 (1.11.1-6) ... Setting up libldap2:i386 (2.6.14+dfsg-2) ... Setting up libgnutls30t64:i386 (3.8.13-1) ... Setting up libgmp-dev:i386 (2:6.3.0+dfsg-5+b2) ... Setting up nettle-dev:i386 (3.10.2-1+b1) ... Setting up libpsl5t64:i386 (0.23.3-1) ... Setting up libpsl-dev:i386 (0.23.3-1) ... Setting up libgnutls-dane0t64:i386 (3.8.13-1) ... Setting up librtmp1:i386 (2.6-1) ... Setting up libldap-dev:i386 (2.6.14+dfsg-2) ... Setting up libgssapi-krb5-2:i386 (1.22.1-3) ... Setting up libssh2-1-dev:i386 (1.11.1-6) ... Setting up libngtcp2-crypto-gnutls8:i386 (1.24.0-1) ... Setting up libgnutls28-dev:i386 (3.8.13-1) ... Setting up libcurl4-gnutls:i386 (8.23.0~rc1-2) ... Setting up libngtcp2-crypto-gnutls-dev:i386 (1.24.0-1) ... Setting up libgssrpc4t64:i386 (1.22.1-3) ... Setting up librtmp-dev:i386 (2.6-1) ... Setting up libkadm5clnt-mit12:i386 (1.22.1-3) ... Setting up libkdb5-10t64:i386 (1.22.1-3) ... Setting up libkadm5srv-mit12:i386 (1.22.1-3) ... Setting up krb5-multidev:i386 (1.22.1-3) ... Setting up libkrb5-dev:i386 (1.22.1-3) ... Setting up libcurl4-gnutls-dev:i386 (8.23.0~rc1-2) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.43-6) ... +------------------------------------------------------------------------------+ | Check architectures Thu, 24 Sep 2026 19:21:45 +0000 | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any all) +------------------------------------------------------------------------------+ | Build environment Thu, 24 Sep 2026 19:21:46 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.107+deb13-arm64 #1 SMP Debian 6.12.107-1 (2026-08-29) arm64 (aarch64) Toolchain package versions: binutils_2.47-6 dpkg-dev_1.23.11 g++-16_16.2.0-3 gcc-16_16.2.0-3 libc6-dev_2.43-6 libstdc++-16-dev_16.2.0-3 libstdc++-16-dev-i386-cross_16.2.0-3cross1 libstdc++6_16.2.0-3 libstdc++6-i386-cross_16.2.0-3cross1 linux-libc-dev_7.2.7-1 Package versions: apt_3.3.3 apt-utils_3.3.3 autoconf_2.73-2 automake_1:1.19-2 autopoint_1.0-5 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8+b1 bash_5.3-4 binutils_2.47-6 binutils-aarch64-linux-gnu_2.47-6 binutils-common_2.47-6 binutils-i686-linux-gnu_2.47-6 bsdextrautils_2.42.3-1 build-essential_12.12 bzip2_1.0.8-6+b2 comerr-dev_2.1-1.47.4-1+b1 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-3 cpp-16-aarch64-linux-gnu_16.2.0-3 cpp-16-i686-linux-gnu_16.2.0-3cross1 cpp-aarch64-linux-gnu_4:16.1.0-3 cpp-i686-linux-gnu_4:16.1.0-3 crossbuild-essential-i386_12.12 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_14.5 debian-archive-keyring_2025.1 debianutils_5.24 dh-autoreconf_23 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1+b1 dpkg_1.23.11 dpkg-dev_1.23.11 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-2 g++_4:16.1.0-3 g++-16_16.2.0-3 g++-16-aarch64-linux-gnu_16.2.0-3 g++-16-i686-linux-gnu_16.2.0-3cross1 g++-aarch64-linux-gnu_4:16.1.0-3 g++-i686-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-3 gcc-16-aarch64-linux-gnu_16.2.0-3 gcc-16-base_16.2.0-3 gcc-16-cross-base_16.2.0-3cross1 gcc-16-i686-linux-gnu_16.2.0-3cross1 gcc-16-i686-linux-gnu-base_16.2.0-3cross1 gcc-aarch64-linux-gnu_4:16.1.0-3 gcc-i686-linux-gnu_4:16.1.0-3 gettext_1.0-5 gettext-base_1.0-5 grep_3.12-1+b1 groff-base_1.24.1-1 gzip_1.14-1 hostname_3.25+b1 init-system-helpers_1.69+nmu3 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.22.1-3 libacl1_2.4.0-1 libapt-pkg7.0_3.3.3 libarchive-zip-perl_1.68-1 libasan8_16.2.0-3 libasan8-i386-cross_16.2.0-3cross1 libatomic1_16.2.0-3 libatomic1-i386-cross_16.2.0-3cross1 libattr1_1:2.6.0-1 libaudit-common_1:4.2.1-1 libaudit1_1:4.2.1-1 libbinutils_2.47-6 libblkid1_2.42.3-1 libbrotli-dev_1.2.0-4+b1 libbrotli1_1.2.0-4+b1 libbz2-1.0_1.0.8-6+b2 libbz2-dev_1.0.8-6+b2 libc-bin_2.43-6 libc-dev-bin_2.43-6 libc-gconv-modules-extra_2.43-6 libc6_2.43-6 libc6-dev_2.43-6 libc6-dev-i386-cross_2.43-3cross8 libc6-i386-cross_2.43-3cross8 libcap-ng0_0.9.6-1 libcc1-0_16.2.0-3 libcom-err2_1.47.4-1+b1 libcrypt1_1:4.5.2+20251210-1 libctf-nobfd0_2.47-6 libctf0_2.47-6 libcurl4-gnutls_8.23.0~rc1-2 libcurl4-gnutls-dev_8.23.0~rc1-2 libdb5.3t64_5.3.28+dfsg2-11+b1 libdebconfclient0_0.283 libdebhelper-perl_14.5 libdeflate-dev_1.25-1 libdeflate0_1.25-1 libdpkg-perl_1.23.11 libelf1t64_0.196-1 libevent-2.1-7t64_2.1.13-stable-1 libffi8_3.8.0-2 libfile-stripnondeterminism-perl_1.15.1-1 libgcc-16-dev_16.2.0-3 libgcc-16-dev-i386-cross_16.2.0-3cross1 libgcc-s1_16.2.0-3 libgcc-s1-i386-cross_16.2.0-3cross1 libgdbm-compat4t64_1.26-1+b2 libgdbm6t64_1.26-1+b2 libgmp-dev_2:6.3.0+dfsg-5+b2 libgmp10_2:6.3.0+dfsg-5+b2 libgmpxx4ldbl_2:6.3.0+dfsg-5+b2 libgnutls-dane0t64_3.8.13-1 libgnutls28-dev_3.8.13-1 libgnutls30t64_3.8.13-1 libgomp1_16.2.0-3 libgomp1-i386-cross_16.2.0-3cross1 libgprofng0_2.47-6 libgssapi-krb5-2_1.22.1-3 libgssrpc4t64_1.22.1-3 libhogweed6t64_3.10.2-1+b1 libhtscodecs-dev_1.6.7-1 libhtscodecs2_1.6.7-1 libhwasan0_16.2.0-3 libidn2-0_2.3.8-5 libidn2-dev_2.3.8-5 libisl23_0.28-1 libitm1_16.2.0-3 libitm1-i386-cross_16.2.0-3cross1 libjansson4_2.15.1-1 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librtmp1_2.6-1 libsasl2-2_2.1.28+dfsg1-11 libsasl2-modules-db_2.1.28+dfsg1-11 libseccomp2_2.6.1-1+b1 libselinux1_3.11-2 libsframe3_2.47-6 libsmartcols1_2.42.3-1 libssh2-1-dev_1.11.1-6 libssh2-1t64_1.11.1-6 libssl-dev_3.6.4-1 libssl3t64_3.6.4-1 libstdc++-16-dev_16.2.0-3 libstdc++-16-dev-i386-cross_16.2.0-3cross1 libstdc++6_16.2.0-3 libstdc++6-i386-cross_16.2.0-3cross1 libsystemd0_262-1 libtasn1-6_4.21.0-2+b1 libtasn1-6-dev_4.21.0-2+b1 libtinfo6_6.6+20260608-2 libtool_2.6.2-3 libtsan2_16.2.0-3 libubsan1_16.2.0-3 libubsan1-i386-cross_16.2.0-3cross1 libuchardet0_0.0.8-2+b2 libudev1_262-1 libunbound8_1.26.1-1 libunistring-dev_1.4.2-1 libunistring5_1.4.2-1 libuuid1_2.42.3-1 libxml2-16_2.15.4+dfsg-1 libxxhash0_0.8.3-2+b2 libzstd-dev_1.5.7+dfsg-4 libzstd1_1.5.7+dfsg-4 linux-libc-dev_7.2.7-1 linux-libc-dev-i386-cross_7.2.7-1 login_1:4.16.0-2+really2.42.3-1 login.defs_1:4.19.3-2 m4_1.4.21-1 make_4.4.1-3+b1 man-db_2.13.1-1+b1 mawk_1.3.4.20260302-2 ncurses-base_6.6+20260608-2 ncurses-bin_6.6+20260608-2 nettle-dev_3.10.2-1+b1 openssl-provider-legacy_3.6.4-1 patch_2.8-2+b1 perl_5.42.3-1 perl-base_5.42.3-1 perl-modules-5.42_5.42.3-1 pkgconf_2.5.1-4 pkgconf-bin_2.5.1-4 po-debconf_1.0.22 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-3 sensible-utils_0.0.26 sqv_1.5.0-1 sysvinit-utils_3.18-1 tar_1.35+dfsg-6 util-linux_2.42.3-1 xz-utils_5.8.4-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Thu, 24 Sep 2026 19:21:47 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: htslib Binary: libhts3t64, libhts-dev, htslib-test, tabix Architecture: any all Version: 1.24-3 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Michael R. Crusoe , Steffen Moeller , Étienne Mollier Homepage: https://github.com/samtools/htslib Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/med-team/htslib Vcs-Git: https://salsa.debian.org/med-team/htslib.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, build-essential Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 14), libbz2-dev, libcurl4-gnutls-dev, liblzma-dev, libssl-dev, zlib1g-dev, libdeflate-dev, libhtscodecs-dev Package-List: htslib-test deb science optional arch=all libhts-dev deb libdevel optional arch=any libhts3t64 deb libs optional arch=any tabix deb science optional arch=any Checksums-Sha1: 17faf63db725c3d9e1bd391753a00b0bb0bc4425 1858118 htslib_1.24.orig.tar.gz 83bf2814fb548616e3e24513b4de901ef33a71d4 21792 htslib_1.24-3.debian.tar.xz Checksums-Sha256: 19c19ec0ea3fbbf380c79c8c6f465d3a6cc2db3694ab2ff5c3567d468099e5ef 1858118 htslib_1.24.orig.tar.gz bd1d7d8775ca6b6bbac98a14192280569d16ea27f2ce8ddbe414f4a7df922d47 21792 htslib_1.24-3.debian.tar.xz Files: 4a36b549462fac72adc758b5ac7c92e6 1858118 htslib_1.24.orig.tar.gz 4ef337f8b649f7f0761ba1a6888e5e50 21792 htslib_1.24-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmqz05cRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGtZA/+PenwDuWLJ6CXcnE2FXTsCjZNJMdQGHSK kO+BWT1tnbWpLfM8VAkG36PV/WUUSb1e+3CHZzS0EvQSBtq88KpC6XiyZ1B46E1y 9nTFmTYRjfRItLDzXU+WVwFUYMclY7+WZIQo01jPg7zu9Hiz+OxvVvswggXI9qWj SOkZ5GuQESj5G7wU8JrCkWqCDupW6gYpn+dQhGreSCqItAsdkhXcI7wYxu3hmHUF uNIe9qzUW8oTlJD2TR6GU1znYngXAaJtCnEnoIRqiSFRKiNQ14cy72N8OIxRCfPZ b5NYnkDEGjWAdVjYMiJjJ40ZZ5nXGiEPgJQP+CfhSMnglfGFgblOXeFsY7Y/+UK3 WhFOPf2Ns4U4xGzKcMjC6duSglZX5T5HrwncnIzRtxz7gmqb1xVjOC2JybKjWmfH 72GTzHzHFfVDYXfNFYbLrPKYDENXvStchYbDNVbknpRTlWoKydTOIjXg+SusNhHi +N5ayWazQ5qcNmzf1Lj+ZTEUUCsQCQdhJXModcn/U/2CmjAQ/6QmU38wmbt4bpGX eBJWIqq8R972vsSxSTxRpPxwaxHVvAFtGMoiHXIngQFu41YVfElJAPRFnxTMCJfA EhVWqUCRbwjRCtbqeHlBcEwWPciITgMNZFw0aSGMa6W/xq5i5ysjWbSjoPqAeAOU vn3vAOhjfAs= =trP7 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./htslib_1.24-3.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./htslib_1.24-3.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting htslib in /build/reproducible-path/htslib-1.24 dpkg-source: info: unpacking htslib_1.24.orig.tar.gz dpkg-source: info: unpacking htslib_1.24-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_git_version dpkg-source: info: applying define_PATH_MAX.patch dpkg-source: info: applying fPIC.patch dpkg-source: info: applying testShebang.patch dpkg-source: info: applying fix_float_precision dpkg-source: info: applying fix_sequence_of_linked_libs.patch dpkg-source: info: applying trim-file-prefix.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ai386 -Pcross,nocheck -us -uc -B --jobs-try=1 dpkg-buildpackage: info: source package htslib dpkg-buildpackage: info: source version 1.24-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from /build/reproducible-path/htslib-1.24/debian/source/options: --extend-diff-ignore=^(\.travis\.yml|README.md|aclocal.m4|config.h.in|configure)$ debian/rules clean dh clean dh_auto_clean make -j1 distclean make[1]: Entering directory '/build/reproducible-path/htslib-1.24' rm -f test/hfile_libcurl.tmp rm -f test/*.tmp test/*.tmp.* test/faidx/*.tmp* \ test/longrefs/*.tmp.* test/ref_cache/*.tmp.* test/tabix/*.tmp.* \ test/bgzf_boundaries/*.tmp.* test/*/FAIL* \ header-exports.txt shlib-exports-so.txt rm -rf htscodecs/tests/test.out rm -f *.o *.pico cram/*.o cram/*.pico test/*.o test/*.dSYM config_vars.h version.h rm -f htscodecs/htscodecs/*.o htscodecs/htscodecs/*.pico rm -f hts-object-files rm -f htscodecs/tests/*.o rm -f ref_cache/*.o rm -f libhts.so libhts.so.* rm -f libhts.a annot-tsv bgzip htsfile tabix test/hts_endian test/fieldarith test/hfile test/pileup test/pileup_mod test/plugins-dlhts test/sam test/test_alloc test/test_bgzf test/test_expr test/test_faidx test/test_kfunc test/test_khash test/test_kstring test/test_mod test/test_nibbles test/test_realn test/test-regidx test/test_str2int test/test_time_funcs test/test_view test/test_index test/test-vcf-api test/test-vcf-sweep test/test-bcf-sr test/fuzz/hts_open_fuzzer.o test/test-bcf-translate test/test-parse-reg test/test_introspection test/test-bcf_set_variant_type test/test_hfile_libcurl test/thrash_threads1 test/thrash_threads2 test/thrash_threads3 test/thrash_threads4 test/thrash_threads5 test/thrash_threads6 test/thrash_threads7 rm -f htscodecs/tests/rans4x8 htscodecs/tests/rans4x16pr htscodecs/tests/arith_dynamic htscodecs/tests/tokenise_name3 htscodecs/tests/fqzcomp_qual htscodecs/tests/varint rm -f config.cache config.h config.log config.mk config.status rm -f TAGS *.pc.tmp *-uninstalled.pc htslib_static.mk htscodecs.mk rm -rf autom4te.cache make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/htslib-1.24' rm -rf test_backup/ make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libhts3t64.substvars debian/libhts-dev.substvars debian/htslib-test.substvars debian/tabix.substvars debian/files rm -fr -- debian/libhts3t64/ debian/tmp/ debian/libhts-dev/ debian/htslib-test/ debian/tabix/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i -v autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: configure.ac: not using Libtool autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: /usr/bin/autoconf --force autoreconf: running: /usr/bin/autoheader --force autoreconf: configure.ac: not using Automake autoreconf: './config.sub' is created autoreconf: './config.guess' is created autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/htslib-1.24' cp htslib.pc.in debian/ cp debian/i386-htslib.pc.in ./htslib.pc.in # create clean copy of test dir cp -a test test_backup # to help with cross building, otherwise MMAP might get turned off export ac_cv_func_mmap_fixed_mapped=yes \ && autoconf \ && dh_auto_configure -- \ --enable-libcurl \ --enable-gcs \ --enable-s3 \ --enable-plugins \ --with-plugin-dir='/usr/lib/i386-linux-gnu/htslib' \ --with-external-htscodecs \ --with-plugin-path='/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/i386-linux-gnu/htslib' ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=i686-linux-gnu --enable-libcurl --enable-gcs --enable-s3 --enable-plugins --with-plugin-dir=/usr/lib/i386-linux-gnu/htslib --with-external-htscodecs --with-plugin-path=/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/i386-linux-gnu/htslib checking for i686-linux-gnu-gcc... i686-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether i686-linux-gnu-gcc accepts -g... yes checking for i686-linux-gnu-gcc option to enable C23 features... none needed checking for i686-linux-gnu-ranlib... i686-linux-gnu-ranlib checking for grep that handles long lines and -e... /usr/bin/grep checking for C compiler warning flags... -Wall checking for i686-linux-gnu-gcc options to detect undeclared functions... none needed checking for i686-linux-gnu-gcc options to ignore future-version functions... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/param.h... yes checking whether _XOPEN_SOURCE is declared... no checking whether __get_cpuid_max is declared... yes checking whether __cpuid_count is declared... yes checking for x86intrin.h... yes checking C compiler flags needed for sse4.1... none checking C compiler flags needed for avx2... none checking C compiler flags needed for avx512f... none checking for working __builtin_clz... yes checking for working __builtin_prefetch... yes checking for working __builtin_cpu_supports("ssse3")... yes checking for working __attribute__((target("ssse3")))... yes checking for i686-linux-gnu-pkg-config... /usr/bin/i686-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking for i686-linux-gnu-gcc option to support large files... -D_FILE_OFFSET_BITS=64 checking shared library type for i686-linux-gnu... plain .so checking whether the linker supports versioned symbols... yes checking whether the compiler accepts -fvisibility=hidden... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... i686-pc-linux-gnu checking for getpagesize... yes checking for working mmap... (cached) yes checking for gmtime_r... yes checking for fsync... yes checking for drand48... yes checking for srand48_deterministic... no checking for getauxval... yes checking for elf_aux_info... no checking for posix_memalign... yes checking whether fdatasync is declared... yes checking for fdatasync... yes checking for __attribute__((constructor))... yes checking for clock_gettime with CLOCK_PROCESS_CPUTIME_ID... yes checking for library containing dlsym... none required checking whether the compiler accepts -rdynamic... yes checking for library containing log... -lm checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing recv... none required checking for bzlib.h... yes checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for lzma.h... yes checking for lzma_easy_buffer_encode in -llzma... yes checking for htscodecs/rANS_static4x16.h... yes checking for rans_compress_bound_4x16 in -lhtscodecs... yes checking for libdeflate.h... yes checking for libdeflate_deflate_compress in -ldeflate... yes checking for curl/curl.h... yes checking for curl_easy_pause in -lcurl... yes checking for CCHmac... no checking for library containing HMAC... -lcrypto checking for fstatat... yes checking for CMSG_LEN... yes checking for epoll... yes (edge triggered) checking for sendfile... yes, Linux-style checking whether EHOSTDOWN is declared... yes checking whether ENONET is declared... yes checking whether AI_V4MAPPED is declared... yes checking whether AI_ADDRCONFIG is declared... yes checking whether the compiler accepts -Wextra... yes checking whether the compiler accepts -Wformat... yes checking whether the compiler accepts -Wformat=2... yes checking whether the compiler accepts -Wconversion... yes checking whether the compiler accepts -Wtrampolines... yes checking whether the compiler accepts -Wstrict-aliasing... yes checking whether the compiler accepts -fstack-clash-protection... yes checking whether the compiler accepts -fstack-protector-strong... yes checking whether the compiler accepts -fcf-protection=full... yes checking whether the compiler accepts -mbranch-protection=standard... no checking whether the compiler accepts -fno-delete-null-pointer-checks... yes checking whether the compiler accepts -Wl,-z,noexecstack... yes checking whether the compiler accepts -Wl,-z,relro... yes checking whether the compiler accepts -Wl,-z,now... yes checking whether the compiler accepts -Wl,--as-needed... yes checking whether the compiler accepts -Wl,--no-copy-dt-needed-entries... yes checking whether the compiler accepts -Wl,-z,nodlopen... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating htslib.pc.tmp config.status: creating config.h config.status: linking htscodecs_external.mk to htscodecs.mk make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/htslib-1.24' dh_auto_build -- \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="-I. -DSAMTOOLS=1 $(dpkg-buildflags --get CPPFLAGS)" \ PACKAGE_VERSION="1.24" \ libdir=/usr/lib/i386-linux-gnu make -j1 CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects" CPPFLAGS="-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" PACKAGE_VERSION=1.24 libdir=/usr/lib/i386-linux-gnu make[2]: Entering directory '/build/reproducible-path/htslib-1.24' i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kfunc.o kfunc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kstring.o kstring.c kstring.c: In function ‘boyer_moore’: kstring.c:468:24: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 468 | return memchr(str, pat[0], n); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bcf_sr_sort.o bcf_sr_sort.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bgzf.o bgzf.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o errmod.o errmod.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o faidx.o faidx.c faidx.c: In function ‘fai_path’: faidx.c:1067:25: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1067 | char *fai_tmp = strstr(fa, HTS_IDX_DELIM); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o header.o header.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hfile.o hfile.c echo '#define HTS_VERSION_TEXT "1.24"' > version.h printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ 'i686-linux-gnu-gcc' \ '-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2' \ '-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects' \ '-Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic' \ '-ldeflate -lhtscodecs -llzma -lbz2 -lz -lm ' \ | sed 's/-ffile-prefix-map=[^ ]*=.//' \ > config_vars.h i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts.o hts.c hts.c: In function ‘hts_open_format’: hts.c:942:33: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 942 | char *rmme = NULL, *fnidx = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ hts.c: In function ‘hts_hopen’: hts.c:1478:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1478 | if ((cp = strchr(mode, ','))) { | ^ hts.c: In function ‘idx_find_and_load’: hts.c:4929:19: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4929 | char *fnidx = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts_expr.o hts_expr.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hts_os.o hts_os.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o md5.o md5.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multipart.o multipart.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o probaln.o probaln.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o realn.o realn.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o regidx.o regidx.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o region.o region.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c sam.c: In function ‘sam_open_mode_opts’: sam.c:5222:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 5222 | if ((opts = strchr(format, ','))) { | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_mods.o sam_mods.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o simd.o simd.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o synced_bcf_reader.o synced_bcf_reader.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcf_sweep.o vcf_sweep.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tbx.o tbx.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o textutils.o textutils.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o thread_pool.o thread_pool.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcf.o vcf.c vcf.c: In function ‘bcf_get_version’: vcf.c:168:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 168 | if (!(major = strstr(version, vcf))) { //bad format | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcfutils.o vcfutils.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_codecs.o cram/cram_codecs.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_decode.o cram/cram_decode.c cram/cram_decode.c: In function ‘cram_decode_seq’: cram/cram_decode.c:1234:35: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1234 | char *N = memchr(refp, 'N', frag_len); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_encode.o cram/cram_encode.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_external.o cram/cram_external.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_index.o cram/cram_index.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_io.o cram/cram_io.c cram/cram_io.c: In function ‘refs_load_fai’: cram/cram_io.c:2323:22: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2323 | char *fn_delim = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ cram/cram_io.c: In function ‘cram_dopen’: cram/cram_io.c:5070:29: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 5070 | fd->prefix = strdup((cp = strrchr(filename, '/')) ? cp+1 : filename); | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/cram_stats.o cram/cram_stats.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/mFILE.o cram/mFILE.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/open_trace_file.o cram/open_trace_file.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/pooled_alloc.o cram/pooled_alloc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram/string_alloc.o cram/string_alloc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -DPLUGINPATH=\"/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/i386-linux-gnu/htslib\" -c -o plugin.o plugin.c ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o simd.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o plugin.o i686-linux-gnu-ranlib libhts.a i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o kfunc.pico kfunc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o kstring.pico kstring.c kstring.c: In function ‘boyer_moore’: kstring.c:468:24: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 468 | return memchr(str, pat[0], n); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o bcf_sr_sort.pico bcf_sr_sort.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o bgzf.pico bgzf.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o errmod.pico errmod.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o faidx.pico faidx.c faidx.c: In function ‘fai_path’: faidx.c:1067:25: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1067 | char *fai_tmp = strstr(fa, HTS_IDX_DELIM); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o header.pico header.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile.pico hfile.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts.pico hts.c hts.c: In function ‘hts_open_format’: hts.c:942:33: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 942 | char *rmme = NULL, *fnidx = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ hts.c: In function ‘hts_hopen’: hts.c:1478:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1478 | if ((cp = strchr(mode, ','))) { | ^ hts.c: In function ‘idx_find_and_load’: hts.c:4929:19: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4929 | char *fnidx = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts_expr.pico hts_expr.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hts_os.pico hts_os.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o md5.pico md5.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o multipart.pico multipart.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o probaln.pico probaln.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o realn.pico realn.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o regidx.pico regidx.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o region.pico region.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o sam.pico sam.c sam.c: In function ‘sam_open_mode_opts’: sam.c:5222:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 5222 | if ((opts = strchr(format, ','))) { | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o sam_mods.pico sam_mods.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o simd.pico simd.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o synced_bcf_reader.pico synced_bcf_reader.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcf_sweep.pico vcf_sweep.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o tbx.pico tbx.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o textutils.pico textutils.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o thread_pool.pico thread_pool.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcf.pico vcf.c vcf.c: In function ‘bcf_get_version’: vcf.c:168:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 168 | if (!(major = strstr(version, vcf))) { //bad format | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o vcfutils.pico vcfutils.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_codecs.pico cram/cram_codecs.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_decode.pico cram/cram_decode.c cram/cram_decode.c: In function ‘cram_decode_seq’: cram/cram_decode.c:1234:35: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1234 | char *N = memchr(refp, 'N', frag_len); | ^~~~~~ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_encode.pico cram/cram_encode.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_external.pico cram/cram_external.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_index.pico cram/cram_index.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_io.pico cram/cram_io.c cram/cram_io.c: In function ‘refs_load_fai’: cram/cram_io.c:2323:22: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2323 | char *fn_delim = strstr(fn, HTS_IDX_DELIM); | ^~~~~~ cram/cram_io.c: In function ‘cram_dopen’: cram/cram_io.c:5070:29: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 5070 | fd->prefix = strdup((cp = strrchr(filename, '/')) ? cp+1 : filename); | ^ i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/cram_stats.pico cram/cram_stats.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/mFILE.pico cram/mFILE.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/open_trace_file.pico cram/open_trace_file.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/pooled_alloc.pico cram/pooled_alloc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o cram/string_alloc.pico cram/string_alloc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -DPLUGINPATH=\"/usr/local/lib/htslib:/usr/local/libexec/htslib:/usr/lib/i386-linux-gnu/htslib\" -fPIC -c -o plugin.pico plugin.c i686-linux-gnu-gcc -shared -Wl,-soname,libhts.so.3 -Wl,-version-script,htslib.map -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o libhts.so kfunc.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico header.pico hfile.pico hts.pico hts_expr.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico region.pico sam.pico sam_mods.pico simd.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_stats.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/string_alloc.pico plugin.pico -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread ln -sf libhts.so libhts.so.3 i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o annot-tsv.o annot-tsv.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o annot-tsv annot-tsv.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bgzip.o bgzip.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o bgzip bgzip.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o htsfile.o htsfile.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o htsfile htsfile.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tabix.o tabix.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o tabix tabix.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm libhts.a -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_libcurl.pico hfile_libcurl.c i686-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_libcurl.so hfile_libcurl.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lcurl -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_gcs.pico hfile_gcs.c i686-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_gcs.so hfile_gcs.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c -o hfile_s3.pico hfile_s3.c i686-linux-gnu-gcc -shared -Wl,-E -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o hfile_s3.so hfile_s3.pico libhts.so -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lcrypto -lcurl -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/hts_endian.o test/hts_endian.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/hts_endian test/hts_endian.o -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/fieldarith.o test/fieldarith.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/fieldarith test/fieldarith.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/hfile.o test/hfile.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/hfile test/hfile.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/pileup.o test/pileup.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/pileup test/pileup.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/pileup_mod.o test/pileup_mod.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/pileup_mod test/pileup_mod.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/plugins-dlhts.o test/plugins-dlhts.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/plugins-dlhts test/plugins-dlhts.o -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/sam.o test/sam.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/sam test/sam.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_alloc.o test/test_alloc.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_alloc test/test_alloc.o i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_bgzf.o test/test_bgzf.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_bgzf test/test_bgzf.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_expr.o test/test_expr.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_expr test/test_expr.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_faidx.o test/test_faidx.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_faidx test/test_faidx.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_kfunc.o test/test_kfunc.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_kfunc test/test_kfunc.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_khash.o test/test_khash.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_khash test/test_khash.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_kstring.o test/test_kstring.c In file included from test/test_kstring.c:38: test/../kstring.c: In function ‘boyer_moore’: test/../kstring.c:468:24: warning: return discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 468 | return memchr(str, pat[0], n); | ^~~~~~ i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_kstring test/test_kstring.o -lm i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_mod.o test/test_mod.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_mod test/test_mod.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_nibbles.o test/test_nibbles.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_nibbles test/test_nibbles.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_realn.o test/test_realn.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_realn test/test_realn.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-regidx.o test/test-regidx.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-regidx test/test-regidx.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_str2int.o test/test_str2int.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_str2int test/test_str2int.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_time_funcs.o test/test_time_funcs.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_time_funcs test/test_time_funcs.o i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_view.o test/test_view.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_view test/test_view.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_index.o test/test_index.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_index test/test_index.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-vcf-api.o test/test-vcf-api.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-vcf-api test/test-vcf-api.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-vcf-sweep.o test/test-vcf-sweep.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-vcf-sweep test/test-vcf-sweep.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf-sr.o test/test-bcf-sr.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf-sr test/test-bcf-sr.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf-translate.o test/test-bcf-translate.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf-translate test/test-bcf-translate.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-parse-reg.o test/test-parse-reg.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-parse-reg test/test-parse-reg.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_introspection.o test/test_introspection.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_introspection test/test_introspection.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test-bcf_set_variant_type.o test/test-bcf_set_variant_type.c In file included from test/test-bcf_set_variant_type.c:30: test/../vcf.c: In function ‘bcf_get_version’: test/../vcf.c:168:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 168 | if (!(major = strstr(version, vcf))) { //bad format | ^ i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test-bcf_set_variant_type test/test-bcf_set_variant_type.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test_hfile_libcurl.o test/test_hfile_libcurl.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -o test/test_hfile_libcurl test/test_hfile_libcurl.o libhts.a -ldeflate -lhtscodecs -llzma -lbz2 -lz -lm -lpthread sed -n '/^static_libs=/s/[^=]*=/HTSLIB_static_LIBS = /p;/^static_ldflags=/s/[^=]*=/HTSLIB_static_LDFLAGS = /p' htslib.pc.tmp > htslib_static.mk sed -e "s#@-includedir@#`pwd`#g;s#@-libdir@#`pwd`#g" htslib.pc.tmp > htslib-uninstalled.pc i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/cmsg_wrap.o ref_cache/cmsg_wrap.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/http_parser.o ref_cache/http_parser.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/listener.o ref_cache/listener.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/log_files.o ref_cache/log_files.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/main.o ref_cache/main.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/misc.o ref_cache/misc.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/ping.o ref_cache/ping.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/poll_wrap_epoll.o ref_cache/poll_wrap_epoll.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/poll_wrap_poll.o ref_cache/poll_wrap_poll.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/ref_files.o ref_cache/ref_files.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/request_handler.o ref_cache/request_handler.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/sendfile_wrap.o ref_cache/sendfile_wrap.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/server.o ref_cache/server.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/transaction.o ref_cache/transaction.c i686-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects -Wextra -Wformat -Wformat=2 -Wconversion -Wtrampolines -Wstrict-aliasing -fstack-clash-protection -fstack-protector-strong -fcf-protection=full -fno-delete-null-pointer-checks -I. -I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ref_cache/upstream.o ref_cache/upstream.c i686-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wl,-flto -fvisibility=hidden -ffat-lto-objects -fvisibility=hidden -rdynamic -Wl,-z,noexecstack -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,nodlopen -o ref_cache/ref-cache ref_cache/cmsg_wrap.o ref_cache/http_parser.o ref_cache/listener.o ref_cache/log_files.o ref_cache/main.o ref_cache/misc.o ref_cache/ping.o ref_cache/poll_wrap_epoll.o ref_cache/poll_wrap_poll.o ref_cache/ref_files.o ref_cache/request_handler.o ref_cache/sendfile_wrap.o ref_cache/server.o ref_cache/transaction.o ref_cache/upstream.o cram/pooled_alloc.o md5.o -lcurl make[2]: Leaving directory '/build/reproducible-path/htslib-1.24' make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/libhts3t64.substvars debian/libhts-dev.substvars debian/tabix.substvars rm -fr -- debian/.debhelper/generated/libhts3t64/ debian/libhts3t64/ debian/tmp/ debian/.debhelper/generated/libhts-dev/ debian/libhts-dev/ debian/.debhelper/generated/tabix/ debian/tabix/ rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/htslib-1.24' for binary in sam test-regidx hts_endian test-bcf-sr test_bgzf ; do \ rm /build/reproducible-path/htslib-1.24/test/${binary} ; \ done dh_auto_install -- prefix=/usr \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="-I. -DSAMTOOLS=1 $(dpkg-buildflags --get CPPFLAGS)" \ PACKAGE_VERSION="1.24" \ libdir=/usr/lib/i386-linux-gnu install -m0755 -d /build/reproducible-path/htslib-1.24/debian/tmp make -j1 install DESTDIR=/build/reproducible-path/htslib-1.24/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/htslib-1.24=. -fstack-protector-strong -Wformat -Werror=format-security -msse -mfpmath=sse -ffat-lto-objects" CPPFLAGS="-I. -DSAMTOOLS=1 -Wdate-time -D_FORTIFY_SOURCE=2" PACKAGE_VERSION=1.24 libdir=/usr/lib/i386-linux-gnu make[2]: Entering directory '/build/reproducible-path/htslib-1.24' mkdir -p -m 755 /build/reproducible-path/htslib-1.24/debian/tmp/usr/bin /build/reproducible-path/htslib-1.24/debian/tmp/usr/include /build/reproducible-path/htslib-1.24/debian/tmp/usr/include/htslib /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man1 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man5 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man7 /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig if test -n "/usr/lib/i386-linux-gnu/htslib"; then mkdir -p -m 755 /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/htslib; fi install -p -m 644 libhts.so /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/libhts.so.1.24 ln -sf libhts.so.1.24 /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/libhts.so ln -sf libhts.so.1.24 /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/libhts.so.3 sed -e 's#@-includedir@#/usr/include#g;s#@-libdir@#/usr/lib/i386-linux-gnu#g;s#@-PACKAGE_VERSION@#1.24#g' htslib.pc.tmp > /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig/htslib.pc chmod 644 /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/pkgconfig/htslib.pc install -p annot-tsv bgzip htsfile tabix ref_cache/ref-cache /build/reproducible-path/htslib-1.24/debian/tmp/usr/bin if test -n "hfile_libcurl.so hfile_gcs.so hfile_s3.so"; then install -p hfile_libcurl.so hfile_gcs.so hfile_s3.so /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/htslib; fi install -p -m 644 htslib/*.h /build/reproducible-path/htslib-1.24/debian/tmp/usr/include/htslib install -p -m 644 libhts.a /build/reproducible-path/htslib-1.24/debian/tmp/usr/lib/i386-linux-gnu/libhts.a install -p -m 644 annot-tsv.1 bgzip.1 htsfile.1 tabix.1 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man1 if test "xref_cache/ref-cache" != "x" ; then \ install -p -m 644 ref_cache/ref-cache.1 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man1 ; \ fi install -p -m 644 faidx.5 sam.5 vcf.5 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man5 install -p -m 644 htslib-s3-plugin.7 /build/reproducible-path/htslib-1.24/debian/tmp/usr/share/man/man7 make[2]: Leaving directory '/build/reproducible-path/htslib-1.24' chmod -R u\+rwX /build/reproducible-path/htslib-1.24/debian/tmp # restore clean copy of test dir before dh_install is run # This should not be done earlier since dh_auto_install contains some unconditional removals rm -f -r test mv test_backup test make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_install -a install -m0755 -d debian/libhts3t64/usr/lib/i386-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/i386-linux-gnu/htslib debian/tmp/usr/lib/i386-linux-gnu/libhts.so.1.24 debian/tmp/usr/lib/i386-linux-gnu/libhts.so.3 debian/libhts3t64/usr/lib/i386-linux-gnu/ install -m0755 -d debian/libhts3t64/usr/share/man/man5 cp --reflink=auto -a debian/tmp/usr/share/man/man5/faidx.5 debian/tmp/usr/share/man/man5/sam.5 debian/tmp/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man5/ install -m0755 -d debian/libhts-dev/usr/include cp --reflink=auto -a debian/tmp/usr/include/htslib debian/libhts-dev/usr/include/ install -m0755 -d debian/libhts-dev/usr/lib/i386-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/i386-linux-gnu/libhts.a debian/tmp/usr/lib/i386-linux-gnu/libhts.so debian/libhts-dev/usr/lib/i386-linux-gnu/ install -m0755 -d debian/libhts-dev/usr/lib/i386-linux-gnu/pkgconfig cp --reflink=auto -a debian/tmp/usr/lib/i386-linux-gnu/pkgconfig/htslib.pc debian/libhts-dev/usr/lib/i386-linux-gnu/pkgconfig/ install -m0755 -d debian/tabix/usr/bin cp --reflink=auto -a ./bgzip ./htsfile ./tabix debian/tabix/usr/bin/ dh_installdocs -a install -m0755 -d debian/libhts3t64/usr/share/doc/libhts3t64 install -p -m0644 debian/copyright debian/libhts3t64/usr/share/doc/libhts3t64/copyright install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./debian/README.test debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./README debian/libhts-dev/usr/share/doc/libhts-dev cp --reflink=auto -a ./README.large_positions.md debian/libhts-dev/usr/share/doc/libhts-dev chmod -R u\+rw,go=rX debian/libhts-dev/usr/share/doc install -p -m0644 debian/copyright debian/libhts-dev/usr/share/doc/libhts-dev/copyright install -m0755 -d debian/tabix/usr/share/doc/tabix install -p -m0644 debian/copyright debian/tabix/usr/share/doc/tabix/copyright rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/htslib-1.24' # Fix Perl interpreter path for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done grep: debian/libhts-dev/usr/lib/i386-linux-gnu/libhts.so: No such file or directory make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/htslib-1.24' dh_installchangelogs NEWS install -m0755 -d debian/libhts3t64/usr/share/doc/libhts3t64 install -p -m0644 debian/.debhelper/generated/libhts3t64/dh_installchangelogs.dch.trimmed debian/libhts3t64/usr/share/doc/libhts3t64/changelog.Debian install -p -m0644 NEWS debian/libhts3t64/usr/share/doc/libhts3t64/changelog install -m0755 -d debian/libhts-dev/usr/share/doc/libhts-dev install -p -m0644 debian/.debhelper/generated/libhts-dev/dh_installchangelogs.dch.trimmed debian/libhts-dev/usr/share/doc/libhts-dev/changelog.Debian install -p -m0644 NEWS debian/libhts-dev/usr/share/doc/libhts-dev/changelog install -m0755 -d debian/tabix/usr/share/doc/tabix install -p -m0644 debian/.debhelper/generated/tabix/dh_installchangelogs.dch.trimmed debian/tabix/usr/share/doc/tabix/changelog.Debian install -p -m0644 NEWS debian/tabix/usr/share/doc/tabix/changelog make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_installman -a install -m0755 -d debian/libhts3t64/usr/share/man/man7/ install -p -m0644 ./htslib-s3-plugin.7 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./htsfile.1 debian/tabix/usr/share/man/man1/htsfile.1 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./tabix.1 debian/tabix/usr/share/man/man1/tabix.1 install -m0755 -d debian/tabix/usr/share/man/man1/ install -p -m0644 ./bgzip.1 debian/tabix/usr/share/man/man1/bgzip.1 man-recode --to-code UTF-8 --suffix .dh-new debian/libhts3t64/usr/share/man/man5/faidx.5 debian/libhts3t64/usr/share/man/man5/sam.5 debian/libhts3t64/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 debian/tabix/usr/share/man/man1/bgzip.1 debian/tabix/usr/share/man/man1/htsfile.1 debian/tabix/usr/share/man/man1/tabix.1 mv debian/libhts3t64/usr/share/man/man5/faidx.5.dh-new debian/libhts3t64/usr/share/man/man5/faidx.5 mv debian/libhts3t64/usr/share/man/man5/sam.5.dh-new debian/libhts3t64/usr/share/man/man5/sam.5 mv debian/libhts3t64/usr/share/man/man5/vcf.5.dh-new debian/libhts3t64/usr/share/man/man5/vcf.5 mv debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7.dh-new debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 mv debian/tabix/usr/share/man/man1/bgzip.1.dh-new debian/tabix/usr/share/man/man1/bgzip.1 mv debian/tabix/usr/share/man/man1/htsfile.1.dh-new debian/tabix/usr/share/man/man1/htsfile.1 mv debian/tabix/usr/share/man/man1/tabix.1.dh-new debian/tabix/usr/share/man/man1/tabix.1 chmod 0644 -- debian/libhts3t64/usr/share/man/man5/faidx.5 debian/libhts3t64/usr/share/man/man5/sam.5 debian/libhts3t64/usr/share/man/man5/vcf.5 debian/libhts3t64/usr/share/man/man7/htslib-s3-plugin.7 debian/tabix/usr/share/man/man1/bgzip.1 debian/tabix/usr/share/man/man1/htsfile.1 debian/tabix/usr/share/man/man1/tabix.1 dh_lintian -a install -m0755 -d debian/libhts-dev/usr/share/lintian/overrides install -p -m0644 debian/libhts-dev.lintian-overrides debian/libhts-dev/usr/share/lintian/overrides/libhts-dev dh_perl -a dh_link -a rm -f debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.3 ln -s libhts.so.1.24 debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.3 rm -f debian/libhts-dev/usr/lib/i386-linux-gnu/libhts.so ln -s libhts.so.1.24 debian/libhts-dev/usr/lib/i386-linux-gnu/libhts.so install -m0755 -d debian/tabix/usr/share/man/man1 rm -f debian/tabix/usr/share/man/man1/bgzip.1.gz ln -s tabix.1.gz debian/tabix/usr/share/man/man1/bgzip.1.gz rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules execute_before_dh_missing make[1]: Entering directory '/build/reproducible-path/htslib-1.24' # FIXME: No idea why these files are remaining in debian/tmp rm -rf debian/tmp/usr/bin debian/tmp/usr/share/man make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_missing -a debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/htslib-1.24' # This is apparently important for the interpretation by ldc2 in sambamba dh_strip -Xlibhts.a install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/90 i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.1.24 debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/90/c2841177a20bfee07d4cd89f2506ca78a1eb4f.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/90/c2841177a20bfee07d4cd89f2506ca78a1eb4f.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.1.24 i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/90/c2841177a20bfee07d4cd89f2506ca78a1eb4f.debug debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.1.24 install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/2c i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_s3.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/2c/c55eca41dde633f7cbf4ca3fb04013f4e84058.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/2c/c55eca41dde633f7cbf4ca3fb04013f4e84058.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_s3.so i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/2c/c55eca41dde633f7cbf4ca3fb04013f4e84058.debug debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_s3.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/53 i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_gcs.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/53/1ecc17508f0ca67fa6da6f990e6bbb485cefe6.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/53/1ecc17508f0ca67fa6da6f990e6bbb485cefe6.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_gcs.so i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/53/1ecc17508f0ca67fa6da6f990e6bbb485cefe6.debug debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_gcs.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/e7 i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_libcurl.so debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/e7/84e6ef2173d66b986877348acc069df35d7f8b.debug chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/e7/84e6ef2173d66b986877348acc069df35d7f8b.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_libcurl.so i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/libhts3t64/dbgsym-root/usr/lib/debug/.build-id/e7/84e6ef2173d66b986877348acc069df35d7f8b.debug debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_libcurl.so install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/usr/share/doc ln -s libhts3t64 debian/.debhelper/libhts3t64/dbgsym-root/usr/share/doc/libhts3t64-dbgsym install -m0755 -d debian/.debhelper/libhts3t64 install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/8e i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/tabix debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/8e/a95d933d12dfa11bff38a49c49335906b1bec0.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/8e/a95d933d12dfa11bff38a49c49335906b1bec0.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/tabix i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/8e/a95d933d12dfa11bff38a49c49335906b1bec0.debug debian/tabix/usr/bin/tabix install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/12 i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/htsfile debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/12/ce16835e918aa2e48614caceb7ebc5b39e4209.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/12/ce16835e918aa2e48614caceb7ebc5b39e4209.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/htsfile i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/12/ce16835e918aa2e48614caceb7ebc5b39e4209.debug debian/tabix/usr/bin/htsfile install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/2f i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tabix/usr/bin/bgzip debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/2f/6a90af701e6da39201efe5b6fdc6e9d319e5a9.debug chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/2f/6a90af701e6da39201efe5b6fdc6e9d319e5a9.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tabix/usr/bin/bgzip i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tabix/dbgsym-root/usr/lib/debug/.build-id/2f/6a90af701e6da39201efe5b6fdc6e9d319e5a9.debug debian/tabix/usr/bin/bgzip install -m0755 -d debian/.debhelper/tabix/dbgsym-root/usr/share/doc ln -s tabix debian/.debhelper/tabix/dbgsym-root/usr/share/doc/tabix-dbgsym install -m0755 -d debian/.debhelper/tabix make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_makeshlibs -a rm -f debian/libhts3t64/DEBIAN/shlibs install -m0755 -d debian/libhts3t64/DEBIAN echo "libhts 3 libhts3t64 (>= 1.24)" >> debian/libhts3t64/DEBIAN/shlibs chmod 0644 -- debian/libhts3t64/DEBIAN/shlibs dpkg-gensymbols -plibhts3t64 -Idebian/libhts3t64.symbols -Pdebian/libhts3t64 -edebian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.1.24 mv debian/.debhelper/generated/libhts3t64/triggers.new debian/.debhelper/generated/libhts3t64/triggers mv debian/libhts3t64.substvars.new debian/libhts3t64.substvars rm -f debian/libhts-dev/DEBIAN/shlibs rm -f debian/tabix/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/libhts3t64/DEBIAN dpkg-shlibdeps -Tdebian/libhts3t64.substvars --package=libhts3t64 debian/libhts3t64/usr/lib/i386-linux-gnu/libhts.so.1.24 debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_s3.so debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_gcs.so debian/libhts3t64/usr/lib/i386-linux-gnu/htslib/hfile_libcurl.so install -m0755 -d debian/tabix/DEBIAN dpkg-shlibdeps -Tdebian/tabix.substvars --package=tabix debian/tabix/usr/bin/tabix debian/tabix/usr/bin/htsfile debian/tabix/usr/bin/bgzip dh_fixperms -a find debian/libhts3t64 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts3t64/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts3t64/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts3t64/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts3t64/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libhts-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libhts-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libhts-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libhts-dev/usr/include debian/libhts-dev/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libhts-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/tabix ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tabix/usr/share/doc -type f -a -true -a ! -regex 'debian/tabix/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tabix/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tabix/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x rm -f debian/libhts-dev.debhelper.log debian/libhts3t64.debhelper.log debian/tabix.debhelper.log debian/rules execute_after_dh_fixperms make[1]: Entering directory '/build/reproducible-path/htslib-1.24' find debian -name simple_test_driver.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/reproducible-path/htslib-1.24' dh_strip_nondeterminism -a dh_compress -a cd debian/libhts3t64 chmod a-x usr/share/doc/libhts3t64/changelog usr/share/doc/libhts3t64/changelog.Debian usr/share/man/man5/faidx.5 usr/share/man/man5/sam.5 usr/share/man/man5/vcf.5 usr/share/man/man7/htslib-s3-plugin.7 gzip -9nf usr/share/doc/libhts3t64/changelog usr/share/doc/libhts3t64/changelog.Debian usr/share/man/man5/faidx.5 usr/share/man/man5/sam.5 usr/share/man/man5/vcf.5 usr/share/man/man7/htslib-s3-plugin.7 cd '/build/reproducible-path/htslib-1.24' cd debian/libhts-dev chmod a-x usr/share/doc/libhts-dev/README.large_positions.md usr/share/doc/libhts-dev/changelog usr/share/doc/libhts-dev/changelog.Debian gzip -9nf usr/share/doc/libhts-dev/README.large_positions.md usr/share/doc/libhts-dev/changelog usr/share/doc/libhts-dev/changelog.Debian cd '/build/reproducible-path/htslib-1.24' cd debian/tabix chmod a-x usr/share/doc/tabix/changelog usr/share/doc/tabix/changelog.Debian usr/share/man/man1/bgzip.1 usr/share/man/man1/htsfile.1 usr/share/man/man1/tabix.1 gzip -9nf usr/share/doc/tabix/changelog usr/share/doc/tabix/changelog.Debian usr/share/man/man1/bgzip.1 usr/share/man/man1/htsfile.1 usr/share/man/man1/tabix.1 cd '/build/reproducible-path/htslib-1.24' dh_installdeb -a install -m0755 -d debian/libhts3t64/DEBIAN install -p -m0644 debian/.debhelper/generated/libhts3t64/triggers debian/libhts3t64/DEBIAN/triggers install -m0755 -d debian/libhts-dev/DEBIAN install -m0755 -d debian/tabix/DEBIAN dh_computeautosubstvars -a mv debian/tabix.substvars.new debian/tabix.substvars mv debian/tabix.substvars.new debian/tabix.substvars mv debian/tabix.substvars.new debian/tabix.substvars dh_gencontrol -a install -m0755 -d debian/libhts3t64/DEBIAN install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN dpkg-gencontrol -plibhts3t64-dbgsym -ldebian/changelog -T/dev/null -cdebian/.debhelper/generated/libhts3t64/rewritten-dctrl -Pdebian/.debhelper/libhts3t64/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libhts3t64-dbgsym -DDepends="libhts3t64 (= \${binary:Version})" -DDescription="debug symbols for libhts3t64" -DBuild-Ids="2cc55eca41dde633f7cbf4ca3fb04013f4e84058 531ecc17508f0ca67fa6da6f990e6bbb485cefe6 90c2841177a20bfee07d4cd89f2506ca78a1eb4f e784e6ef2173d66b986877348acc069df35d7f8b" -DSection=debug -DMulti-Arch=same -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibhts3t64 -ldebian/changelog -Tdebian/libhts3t64.substvars -cdebian/.debhelper/generated/libhts3t64/rewritten-dctrl -Pdebian/libhts3t64 dpkg-gencontrol: warning: Pre-Depends field of package libhts3t64: substitution variable ${misc:Pre-Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package libhts3t64: substitution variable ${misc:Depends} used, but is not defined chmod 0644 -- debian/libhts3t64/DEBIAN/control install -m0755 -d debian/libhts-dev/DEBIAN dpkg-gencontrol -plibhts-dev -ldebian/changelog -Tdebian/libhts-dev.substvars -cdebian/control -Pdebian/libhts-dev dpkg-gencontrol: warning: Depends field of package libhts-dev: substitution variable ${misc:Depends} used, but is not defined chmod 0644 -- debian/libhts-dev/DEBIAN/control install -m0755 -d debian/tabix/DEBIAN install -m0755 -d debian/.debhelper/tabix/dbgsym-root/DEBIAN dpkg-gencontrol -ptabix-dbgsym -ldebian/changelog -T/dev/null -cdebian/.debhelper/generated/tabix/rewritten-dctrl -Pdebian/.debhelper/tabix/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=tabix-dbgsym -DDepends="tabix (= \${binary:Version})" -DDescription="debug symbols for tabix" -DBuild-Ids="12ce16835e918aa2e48614caceb7ebc5b39e4209 2f6a90af701e6da39201efe5b6fdc6e9d319e5a9 8ea95d933d12dfa11bff38a49c49335906b1bec0" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptabix -ldebian/changelog -Tdebian/tabix.substvars -cdebian/.debhelper/generated/tabix/rewritten-dctrl -Pdebian/tabix dpkg-gencontrol: warning: Depends field of package tabix: substitution variable ${misc:Depends} used, but is not defined chmod 0644 -- debian/tabix/DEBIAN/control dh_md5sums -a install -m0755 -d debian/libhts3t64/DEBIAN cd debian/libhts3t64 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts3t64/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN cd debian/.debhelper/libhts3t64/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libhts3t64/dbgsym-root/DEBIAN/md5sums install -m0755 -d debian/libhts-dev/DEBIAN cd debian/libhts-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libhts-dev/DEBIAN/md5sums install -m0755 -d debian/tabix/DEBIAN cd debian/tabix >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tabix/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tabix/dbgsym-root/DEBIAN cd debian/.debhelper/tabix/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tabix/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/libhts3t64 .. dpkg-deb: building package 'libhts3t64' in '../libhts3t64_1.24-3_i386.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/libhts3t64/dbgsym-root .. dpkg-deb: building package 'libhts3t64-dbgsym' in '../libhts3t64-dbgsym_1.24-3_i386.deb'. dpkg-deb --root-owner-group --build debian/libhts-dev .. dpkg-deb: building package 'libhts-dev' in '../libhts-dev_1.24-3_i386.deb'. dpkg-deb --root-owner-group --build debian/tabix .. dpkg-deb: building package 'tabix' in '../tabix_1.24-3_i386.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/tabix/dbgsym-root .. dpkg-deb: building package 'tabix-dbgsym' in '../tabix-dbgsym_1.24-3_i386.deb'. dpkg-genbuildinfo --build=any -O../htslib_1.24-3_i386.buildinfo dpkg-genchanges --build=any -O../htslib_1.24-3_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from /build/reproducible-path/htslib-1.24/debian/source/options: --extend-diff-ignore=^(\.travis\.yml|README.md|aclocal.m4|config.h.in|configure)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-09-24T19:30:01Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands Thu, 24 Sep 2026 19:30:01 +0000 | +------------------------------------------------------------------------------+ rm -Rf /build/reproducible-path/htslib-1.24/ -------------------------------------------- I: Finished running 'rm -Rf /build/reproducible-path/htslib-1.24/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Thu, 24 Sep 2026 19:30:03 +0000 | +------------------------------------------------------------------------------+ htslib_1.24-3_i386.changes: --------------------------- Format: 1.8 Date: Wed, 23 Sep 2026 12:00:00 +0200 Source: htslib Binary: libhts-dev libhts3t64 libhts3t64-dbgsym tabix tabix-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 1.24-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libhts-dev - development files for the HTSlib libhts3t64 - C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome position files Closes: 1148751 Changes: htslib (1.24-3) unstable; urgency=medium . * d/libhts3t64.symbols: restore (arch=amd64 arm64 hurd-amd64 x32) qualifier on htslib_nibble2base (Closes: #1148751) Checksums-Sha1: 72a4e67b33286b4663cdc48dd3fa6bdcc2cbaf1a 7387 htslib_1.24-3_i386.buildinfo 11cd1ba416d2961824e5eebf4ac7474c6042c1bc 1896228 libhts-dev_1.24-3_i386.deb 04c391549f3127368341de238db2caf8ef18c390 1430624 libhts3t64-dbgsym_1.24-3_i386.deb b92984f689f46afac92c16937b711202d956c3fd 540724 libhts3t64_1.24-3_i386.deb 637229d941c0d4b22bf6b88d52415e0c6e314e1c 3227760 tabix-dbgsym_1.24-3_i386.deb d74000b2378338c0f2e39da6872ed2f7663795dc 569020 tabix_1.24-3_i386.deb Checksums-Sha256: 1ff31ebdbbf9f5a774fd5cb166ea2a077c7c9c6637f9154e49dc15ebccdde429 7387 htslib_1.24-3_i386.buildinfo b8e3be045d10ea6d26edbc5fcf11fde77f24dca595074061fadc809fd3275efe 1896228 libhts-dev_1.24-3_i386.deb cefdcf826b5eb8f00f3f3d23c8a6bee484244e70409f81a3985cc54ac7cfaa98 1430624 libhts3t64-dbgsym_1.24-3_i386.deb fe9831558e1938f6173d16b2de83e3bdecfbad57d5f2122b282142d0f746f3e3 540724 libhts3t64_1.24-3_i386.deb 028b4d0bb0dfb6e3e32f5621736cfe705ce3018e22f26d7d8b7bc0df67edf474 3227760 tabix-dbgsym_1.24-3_i386.deb f29a225f05ee9364206433ef3a983efc93271fba65a96dcca69d497dc7e6a6d0 569020 tabix_1.24-3_i386.deb Files: 02261b974b5d9b5b540c57198705adb5 7387 science optional htslib_1.24-3_i386.buildinfo 4f15dff77aeed885fcf6e5c93172d98c 1896228 libdevel optional libhts-dev_1.24-3_i386.deb 70cfce658da1fbdc3e753a97384b17ff 1430624 debug optional libhts3t64-dbgsym_1.24-3_i386.deb 4d91f054edcd4b71d3c474681dd4d85c 540724 libs optional libhts3t64_1.24-3_i386.deb e0b0b9f1811723b1fd2e083cecec4fc8 3227760 debug optional tabix-dbgsym_1.24-3_i386.deb ac57c33b168d35980319a1698f1796b8 569020 science optional tabix_1.24-3_i386.deb +------------------------------------------------------------------------------+ | Buildinfo Thu, 24 Sep 2026 19:30:05 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: htslib Binary: libhts-dev libhts3t64 libhts3t64-dbgsym tabix tabix-dbgsym Architecture: i386 Version: 1.24-3 Checksums-Md5: 4f15dff77aeed885fcf6e5c93172d98c 1896228 libhts-dev_1.24-3_i386.deb 70cfce658da1fbdc3e753a97384b17ff 1430624 libhts3t64-dbgsym_1.24-3_i386.deb 4d91f054edcd4b71d3c474681dd4d85c 540724 libhts3t64_1.24-3_i386.deb e0b0b9f1811723b1fd2e083cecec4fc8 3227760 tabix-dbgsym_1.24-3_i386.deb ac57c33b168d35980319a1698f1796b8 569020 tabix_1.24-3_i386.deb Checksums-Sha1: 11cd1ba416d2961824e5eebf4ac7474c6042c1bc 1896228 libhts-dev_1.24-3_i386.deb 04c391549f3127368341de238db2caf8ef18c390 1430624 libhts3t64-dbgsym_1.24-3_i386.deb b92984f689f46afac92c16937b711202d956c3fd 540724 libhts3t64_1.24-3_i386.deb 637229d941c0d4b22bf6b88d52415e0c6e314e1c 3227760 tabix-dbgsym_1.24-3_i386.deb d74000b2378338c0f2e39da6872ed2f7663795dc 569020 tabix_1.24-3_i386.deb Checksums-Sha256: b8e3be045d10ea6d26edbc5fcf11fde77f24dca595074061fadc809fd3275efe 1896228 libhts-dev_1.24-3_i386.deb cefdcf826b5eb8f00f3f3d23c8a6bee484244e70409f81a3985cc54ac7cfaa98 1430624 libhts3t64-dbgsym_1.24-3_i386.deb fe9831558e1938f6173d16b2de83e3bdecfbad57d5f2122b282142d0f746f3e3 540724 libhts3t64_1.24-3_i386.deb 028b4d0bb0dfb6e3e32f5621736cfe705ce3018e22f26d7d8b7bc0df67edf474 3227760 tabix-dbgsym_1.24-3_i386.deb f29a225f05ee9364206433ef3a983efc93271fba65a96dcca69d497dc7e6a6d0 569020 tabix_1.24-3_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Thu, 24 Sep 2026 19:30:00 +0000 Build-Path: /build/reproducible-path/htslib-1.24 Installed-Build-Depends: autoconf (= 2.73-2), automake (= 1:1.19-2), autopoint (= 1.0-5), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8+b1), bash (= 5.3-4), binutils (= 2.47-6), binutils-aarch64-linux-gnu (= 2.47-6), binutils-common (= 2.47-6), bsdextrautils (= 2.42.3-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), comerr-dev (= 2.1-1.47.4-1+b1), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-16 (= 16.2.0-3), cpp-16-aarch64-linux-gnu (= 16.2.0-3), cpp-aarch64-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 14.5), debianutils (= 5.24), dh-autoreconf (= 23), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.11), dpkg-dev (= 1.23.11), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.11.0-2), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-3), g++-16-aarch64-linux-gnu (= 16.2.0-3), g++-aarch64-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-16 (= 16.2.0-3), gcc-16-aarch64-linux-gnu (= 16.2.0-3), gcc-16-base (= 16.2.0-3), gcc-aarch64-linux-gnu (= 4:16.1.0-3), gettext (= 1.0-5), gettext-base (= 1.0-5), grep (= 3.12-1+b1), groff-base (= 1.24.1-1), gzip (= 1.14-1), hostname (= 3.25+b1), init-system-helpers (= 1.69+nmu3), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-3), libacl1 (= 2.4.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.2.0-3), libatomic1 (= 16.2.0-3), libattr1 (= 1:2.6.0-1), libaudit-common (= 1:4.2.1-1), libaudit1 (= 1:4.2.1-1), libbinutils (= 2.47-6), libblkid1 (= 2.42.3-1), libbrotli-dev (= 1.2.0-4+b1), libbrotli1 (= 1.2.0-4+b1), libbz2-1.0 (= 1.0.8-6+b2), libbz2-dev (= 1.0.8-6+b2), libc-bin (= 2.43-6), libc-dev-bin (= 2.43-6), libc-gconv-modules-extra (= 2.43-6), libc6 (= 2.43-6), libc6-dev (= 2.43-6), libcap-ng0 (= 0.9.6-1), libcc1-0 (= 16.2.0-3), libcom-err2 (= 1.47.4-1+b1), libcrypt1 (= 1:4.5.2+20251210-1), libctf-nobfd0 (= 2.47-6), libctf0 (= 2.47-6), libcurl4-gnutls (= 8.23.0~rc1-2), libcurl4-gnutls-dev (= 8.23.0~rc1-2), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.5), libdeflate-dev (= 1.25-1), libdeflate0 (= 1.25-1), libdpkg-perl (= 1.23.11), libelf1t64 (= 0.196-1), libevent-2.1-7t64 (= 2.1.13-stable-1), libffi8 (= 3.8.0-2), libfile-stripnondeterminism-perl (= 1.15.1-1), libgcc-16-dev (= 16.2.0-3), libgcc-s1 (= 16.2.0-3), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgmp-dev (= 2:6.3.0+dfsg-5+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2), libgnutls-dane0t64 (= 3.8.13-1), libgnutls28-dev (= 3.8.13-1), libgnutls30t64 (= 3.8.13-1), libgomp1 (= 16.2.0-3), libgprofng0 (= 2.47-6), libgssapi-krb5-2 (= 1.22.1-3), libgssrpc4t64 (= 1.22.1-3), libhogweed6t64 (= 3.10.2-1+b1), libhtscodecs-dev (= 1.6.7-1), libhtscodecs2 (= 1.6.7-1), libhwasan0 (= 16.2.0-3), libidn2-0 (= 2.3.8-5), libidn2-dev (= 2.3.8-5), libisl23 (= 0.28-1), libitm1 (= 16.2.0-3), libjansson4 (= 2.15.1-1), libk5crypto3 (= 1.22.1-3), libkadm5clnt-mit12 (= 1.22.1-3), libkadm5srv-mit12 (= 1.22.1-3), libkdb5-10t64 (= 1.22.1-3), libkeyutils1 (= 1.6.3-6+b2), libkrb5-3 (= 1.22.1-3), libkrb5-dev (= 1.22.1-3), libkrb5support0 (= 1.22.1-3), libldap-dev (= 2.6.14+dfsg-2), libldap2 (= 2.6.14+dfsg-2), liblsan0 (= 16.2.0-3), liblzma-dev (= 5.8.4-1), liblzma5 (= 5.8.4-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libmount1 (= 2.42.3-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libnettle8t64 (= 3.10.2-1+b1), libnghttp2-14 (= 1.70.0-1), libnghttp2-dev (= 1.70.0-1), libnghttp3-9 (= 1.17.0-1), libnghttp3-dev (= 1.17.0-1), libngtcp2-16 (= 1.24.0-1), libngtcp2-crypto-gnutls-dev (= 1.24.0-1), libngtcp2-crypto-gnutls8 (= 1.24.0-1), libngtcp2-dev (= 1.24.0-1), libp11-kit-dev (= 0.26.5-1), libp11-kit0 (= 0.26.5-1), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam0g (= 1.7.0-8), libpcre2-8-0 (= 10.48-3), libperl5.42 (= 5.42.3-1), libpipeline1 (= 1.5.8-3), libpkgconf7 (= 2.5.1-4), libpsl-dev (= 0.23.3-1), libpsl5t64 (= 0.23.3-1), librtmp-dev (= 2.6-1), librtmp1 (= 2.6-1), libsasl2-2 (= 2.1.28+dfsg1-11), libsasl2-modules-db (= 2.1.28+dfsg1-11), libseccomp2 (= 2.6.1-1+b1), libselinux1 (= 3.11-2), libsframe3 (= 2.47-6), libsmartcols1 (= 2.42.3-1), libssh2-1-dev (= 1.11.1-6), libssh2-1t64 (= 1.11.1-6), libssl-dev (= 3.6.4-1), libssl3t64 (= 3.6.4-1), libstdc++-16-dev (= 16.2.0-3), libstdc++6 (= 16.2.0-3), libsystemd0 (= 262-1), libtasn1-6 (= 4.21.0-2+b1), libtasn1-6-dev (= 4.21.0-2+b1), libtinfo6 (= 6.6+20260608-2), libtool (= 2.6.2-3), libtsan2 (= 16.2.0-3), libubsan1 (= 16.2.0-3), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 262-1), libunbound8 (= 1.26.1-1), libunistring-dev (= 1.4.2-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42.3-1), libxml2-16 (= 2.15.4+dfsg-1), libzstd-dev (= 1.5.7+dfsg-4), libzstd1 (= 1.5.7+dfsg-4), linux-libc-dev (= 7.2.7-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), mawk (= 1.3.4.20260302-2), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), nettle-dev (= 3.10.2-1+b1), openssl-provider-legacy (= 3.6.4-1), patch (= 2.8-2+b1), perl (= 5.42.3-1), perl-base (= 5.42.3-1), perl-modules-5.42 (= 5.42.3-1), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-6), util-linux (= 2.42.3-1), xz-utils (= 5.8.4-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1790157600" +------------------------------------------------------------------------------+ | Package contents Thu, 24 Sep 2026 19:30:05 +0000 | +------------------------------------------------------------------------------+ libhts-dev_1.24-3_i386.deb -------------------------- new Debian package, version 2.0. size 1896228 bytes: control archive=2044 bytes. 1221 bytes, 27 lines control 2481 bytes, 38 lines md5sums Package: libhts-dev Source: htslib Version: 1.24-3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 5645 Depends: libbz2-dev, libhts3t64 (= 1.24-3), libcurl4-gnutls-dev, libdeflate-dev, liblzma-dev, zlib1g-dev Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/samtools/htslib Description: development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix. drwxr-xr-x root/root 0 2026-09-23 10:00 ./ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/include/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/include/htslib/ -rw-r--r-- root/root 17985 2026-07-09 09:41 ./usr/include/htslib/bgzf.h -rw-r--r-- root/root 24614 2026-07-09 09:41 ./usr/include/htslib/cram.h -rw-r--r-- root/root 15102 2026-07-09 09:41 ./usr/include/htslib/faidx.h -rw-r--r-- root/root 14065 2026-07-09 09:41 ./usr/include/htslib/hfile.h -rw-r--r-- root/root 58286 2026-07-09 09:41 ./usr/include/htslib/hts.h -rw-r--r-- root/root 11143 2026-07-09 09:41 ./usr/include/htslib/hts_alloc.h -rw-r--r-- root/root 4948 2026-07-09 09:41 ./usr/include/htslib/hts_defs.h -rw-r--r-- root/root 11729 2026-07-09 09:41 ./usr/include/htslib/hts_endian.h -rw-r--r-- root/root 5991 2026-07-09 09:41 ./usr/include/htslib/hts_expr.h -rw-r--r-- root/root 3958 2026-07-09 09:41 ./usr/include/htslib/hts_log.h -rw-r--r-- root/root 2842 2026-07-09 09:41 ./usr/include/htslib/hts_os.h -rw-r--r-- root/root 5646 2026-07-09 09:41 ./usr/include/htslib/kbitset.h -rw-r--r-- root/root 2828 2026-07-09 09:41 ./usr/include/htslib/kfunc.h -rw-r--r-- root/root 28269 2026-07-09 09:41 ./usr/include/htslib/khash.h -rw-r--r-- root/root 4050 2026-07-09 09:41 ./usr/include/htslib/khash_str2int.h -rw-r--r-- root/root 5189 2026-07-09 09:41 ./usr/include/htslib/klist.h -rw-r--r-- root/root 3733 2026-07-09 09:41 ./usr/include/htslib/knetfile.h -rw-r--r-- root/root 3295 2026-07-09 09:41 ./usr/include/htslib/kroundup.h -rw-r--r-- root/root 9357 2026-07-09 09:41 ./usr/include/htslib/kseq.h -rw-r--r-- root/root 11585 2026-07-09 09:41 ./usr/include/htslib/ksort.h -rw-r--r-- root/root 14267 2026-07-09 09:41 ./usr/include/htslib/kstring.h -rw-r--r-- root/root 8881 2026-07-09 09:41 ./usr/include/htslib/regidx.h -rw-r--r-- root/root 93048 2026-07-09 09:41 ./usr/include/htslib/sam.h -rw-r--r-- root/root 20839 2026-07-09 09:41 ./usr/include/htslib/synced_bcf_reader.h -rw-r--r-- root/root 5194 2026-07-09 09:41 ./usr/include/htslib/tbx.h -rw-r--r-- root/root 12969 2026-07-09 09:41 ./usr/include/htslib/thread_pool.h -rw-r--r-- root/root 71003 2026-07-09 09:41 ./usr/include/htslib/vcf.h -rw-r--r-- root/root 1686 2026-07-09 09:41 ./usr/include/htslib/vcf_sweep.h -rw-r--r-- root/root 4919 2026-07-09 09:41 ./usr/include/htslib/vcfutils.h drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/ -rw-r--r-- root/root 5214076 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/libhts.a lrwxrwxrwx root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/libhts.so -> libhts.so.1.24 drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/pkgconfig/ -rw-r--r-- root/root 692 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/pkgconfig/htslib.pc drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/ 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516 bytes, 13 lines control 424 bytes, 4 lines md5sums Package: libhts3t64-dbgsym Source: htslib Version: 1.24-3 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1474 Depends: libhts3t64 (= 1.24-3) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libhts3t64 Build-Ids: 2cc55eca41dde633f7cbf4ca3fb04013f4e84058 531ecc17508f0ca67fa6da6f990e6bbb485cefe6 90c2841177a20bfee07d4cd89f2506ca78a1eb4f e784e6ef2173d66b986877348acc069df35d7f8b drwxr-xr-x root/root 0 2026-09-23 10:00 ./ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/2c/ -rw-r--r-- root/root 83612 2026-09-23 10:00 ./usr/lib/debug/.build-id/2c/c55eca41dde633f7cbf4ca3fb04013f4e84058.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/53/ -rw-r--r-- root/root 14932 2026-09-23 10:00 ./usr/lib/debug/.build-id/53/1ecc17508f0ca67fa6da6f990e6bbb485cefe6.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/90/ -rw-r--r-- root/root 1349032 2026-09-23 10:00 ./usr/lib/debug/.build-id/90/c2841177a20bfee07d4cd89f2506ca78a1eb4f.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/e7/ -rw-r--r-- root/root 46836 2026-09-23 10:00 ./usr/lib/debug/.build-id/e7/84e6ef2173d66b986877348acc069df35d7f8b.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-09-23 10:00 ./usr/share/doc/libhts3t64-dbgsym -> libhts3t64 libhts3t64_1.24-3_i386.deb -------------------------- new Debian package, version 2.0. size 540724 bytes: control archive=6052 bytes. 1222 bytes, 24 lines control 789 bytes, 11 lines md5sums 30 bytes, 1 lines shlibs 28960 bytes, 897 lines symbols 65 bytes, 2 lines triggers Package: libhts3t64 Source: htslib Version: 1.24-3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1259 Depends: libbz2-1.0, libc6 (>= 2.38), libcurl4-gnutls (>= 8.20.0-3~), libdeflate0 (>= 1.0), libhtscodecs2 (>= 1.3.0), liblzma5 (>= 5.1.1alpha+20120614), libssl3t64 (>= 3.0.0), zlib1g (>= 1:1.1.4) Breaks: libhts3 (<< 1.24-3), libtabixpp (<< 1.0.0-5~), samtools (<< 1.17~) Replaces: libhts3 Provides: libhts3 (= 1.24-3) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/samtools/htslib Description: C library for high-throughput sequencing data formats HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. drwxr-xr-x root/root 0 2026-09-23 10:00 ./ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/htslib/ -rw-r--r-- root/root 13620 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/htslib/hfile_gcs.so -rw-r--r-- root/root 34224 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/htslib/hfile_libcurl.so -rw-r--r-- root/root 58676 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/htslib/hfile_s3.so -rw-r--r-- root/root 1070532 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/libhts.so.1.24 lrwxrwxrwx root/root 0 2026-09-23 10:00 ./usr/lib/i386-linux-gnu/libhts.so.3 -> libhts.so.1.24 drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/libhts3t64/ -rw-r--r-- root/root 2625 2026-09-23 10:00 ./usr/share/doc/libhts3t64/changelog.Debian.gz -rw-r--r-- root/root 45327 2026-07-09 09:41 ./usr/share/doc/libhts3t64/changelog.gz -rw-r--r-- root/root 3951 2026-09-23 10:00 ./usr/share/doc/libhts3t64/copyright drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/man/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/man/man5/ -rw-r--r-- root/root 2452 2026-09-23 10:00 ./usr/share/man/man5/faidx.5.gz -rw-r--r-- root/root 1537 2026-09-23 10:00 ./usr/share/man/man5/sam.5.gz -rw-r--r-- root/root 1857 2026-09-23 10:00 ./usr/share/man/man5/vcf.5.gz drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/man/man7/ -rw-r--r-- root/root 3416 2026-09-23 10:00 ./usr/share/man/man7/htslib-s3-plugin.7.gz tabix-dbgsym_1.24-3_i386.deb ---------------------------- new Debian package, version 2.0. size 3227760 bytes: control archive=656 bytes. 443 bytes, 12 lines control 318 bytes, 3 lines md5sums Package: tabix-dbgsym Source: htslib Version: 1.24-3 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 3937 Depends: tabix (= 1.24-3) Section: debug Priority: optional Description: debug symbols for tabix Build-Ids: 12ce16835e918aa2e48614caceb7ebc5b39e4209 2f6a90af701e6da39201efe5b6fdc6e9d319e5a9 8ea95d933d12dfa11bff38a49c49335906b1bec0 drwxr-xr-x root/root 0 2026-09-23 10:00 ./ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/12/ -rw-r--r-- root/root 1424824 2026-09-23 10:00 ./usr/lib/debug/.build-id/12/ce16835e918aa2e48614caceb7ebc5b39e4209.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/2f/ -rw-r--r-- root/root 1129752 2026-09-23 10:00 ./usr/lib/debug/.build-id/2f/6a90af701e6da39201efe5b6fdc6e9d319e5a9.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/lib/debug/.build-id/8e/ -rw-r--r-- root/root 1463272 2026-09-23 10:00 ./usr/lib/debug/.build-id/8e/a95d933d12dfa11bff38a49c49335906b1bec0.debug drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-09-23 10:00 ./usr/share/doc/tabix-dbgsym -> tabix tabix_1.24-3_i386.deb --------------------- new Debian package, version 2.0. size 569020 bytes: control archive=1136 bytes. 1013 bytes, 21 lines control 545 bytes, 9 lines md5sums Package: tabix Source: htslib Version: 1.24-3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 2704 Depends: libbz2-1.0, libc6 (>= 2.38), libdeflate0 (>= 1.0), libhtscodecs2 (>= 1.3.0), liblzma5 (>= 5.1.1alpha+20120614), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/samtools/htslib Description: generic indexer for TAB-delimited genome position files Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name. . This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools. Commands: bgzip, htsfile, tabix drwxr-xr-x root/root 0 2026-09-23 10:00 ./ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/bin/ -rwxr-xr-x root/root 775724 2026-09-23 10:00 ./usr/bin/bgzip -rwxr-xr-x root/root 943692 2026-09-23 10:00 ./usr/bin/htsfile -rwxr-xr-x root/root 976460 2026-09-23 10:00 ./usr/bin/tabix drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/doc/tabix/ -rw-r--r-- root/root 2626 2026-09-23 10:00 ./usr/share/doc/tabix/changelog.Debian.gz -rw-r--r-- root/root 45327 2026-07-09 09:41 ./usr/share/doc/tabix/changelog.gz -rw-r--r-- root/root 3951 2026-09-23 10:00 ./usr/share/doc/tabix/copyright drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/man/ drwxr-xr-x root/root 0 2026-09-23 10:00 ./usr/share/man/man1/ -rw-r--r-- root/root 3062 2026-09-23 10:00 ./usr/share/man/man1/bgzip.1.gz -rw-r--r-- root/root 1916 2026-09-23 10:00 ./usr/share/man/man1/htsfile.1.gz -rw-r--r-- root/root 3647 2026-09-23 10:00 ./usr/share/man/man1/tabix.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/build/reproducible-path/resolver-cheBIP/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Release [615 B] Ign:3 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Sources [1420 B] Get:5 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ Packages [1497 B] Fetched 3532 B in 0s (147 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat distro-info-data gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl4-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdistro-info-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-someutils-xs-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-someutil-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-1 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools low-memory-monitor gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl python3 readline-doc zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common libfreezethaw-perl libgpm2 libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: appstream ca-certificates diffstat distro-info-data gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl4-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdistro-info-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-someutils-xs-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-someutil-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-1 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common sbuild-build-depends-lintian-dummy:i386 shared-mime-info t1utils ucf unzip 0 upgraded, 180 newly installed, 0 to remove and 0 not upgraded. Need to get 23.8 MB of archives. After this operation, 98.6 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-cheBIP/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [836 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.6 [10.3 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20260608-2 [125 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libproc2-1 arm64 2:4.0.7-1 [66.2 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.7-1 [971 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.6.4-1 [1499 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20260816 [134 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-12+b1 [9412 B] Get:10 http://mirror.einval.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:11 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0056 [47.1 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libffi8 arm64 3.8.0-2 [25.9 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.90.0-1 [1436 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libnghttp3-9 arm64 1.17.0-1 [63.0 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-16 arm64 1.24.0-1 [129 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libbrotli1 arm64 1.2.0-4+b1 [293 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-5 [107 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.5-1 [440 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2+b1 [46.9 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.13-1 [1434 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-3 [30.2 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1+b1 [19.4 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-3 [74.7 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b2 [9444 B] Get:26 http://mirror.einval.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-3 [314 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-3 [125 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-11 [17.1 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-11 [52.4 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libldap2 arm64 2.6.14+dfsg-2 [173 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libnghttp2-14 arm64 1.70.0-1 [87.9 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.24.0-1 [22.5 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libpsl5t64 arm64 0.23.3-1 [61.0 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-6 [235 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libcurl4-gnutls arm64 8.23.0~rc1-2 [392 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libfyaml0 arm64 0.9.4-1 [245 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libstemmer0d arm64 3.1.1-1 [132 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libxmlb2 arm64 0.3.29-1 [58.5 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libappstream5 arm64 1.2.0-2 [230 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 appstream arm64 1.2.0-2 [618 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.69-1 [32.5 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 distro-info-data all 2026.08.20-1 [6292 B] Get:43 http://mirror.einval.org/debian unstable/main arm64 libgpg-error0 arm64 1.61-5 [84.8 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libassuan9 arm64 3.0.2-2+b2 [57.6 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libgcrypt20 arm64 1.12.3-2 [803 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.4.9-7+b1 [118 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libksba8 arm64 1.8.1-1 [127 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libnpth0t64 arm64 1.8-4 [22.7 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.53.4-2 [901 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.4.9-7+b1 [566 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.20.1-1 [3319 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.43+b1 [64.6 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b5 [10.7 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-3+b1 [15.8 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b7 [22.4 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:63 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.65-1 [44.1 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.66-2+b2 [116 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.37-1 [113 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-2+b2 [96.7 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.72-1 [217 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:72 http://mirror.einval.org/debian unstable/main arm64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b8 [35.4 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.50-1+b2 [21.0 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libparams-someutil-perl arm64 1.11-1 [24.2 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.115-1 [10.4 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3+b3 [24.1 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1.1 [49.5 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:83 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.51-1 [137 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-3+b2 [30.9 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0003-1 [28.5 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b7 [98.0 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.87-1+b1 [24.0 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libdistro-info-perl all 1.17 [5192 B] Get:99 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b6 [28.3 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:104 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:105 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.35-1 [25.9 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libfile-libmagic-perl arm64 1.23-2+b4 [31.2 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3500-1 [64.2 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.08-1 [12.1 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 7.04-1 [80.6 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.13-1 [32.6 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.12-2 [19.2 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:122 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.96-2 [327 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.099-1 [229 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.24-1 [23.2 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.15-1 [10.7 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.03-1 [15.8 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.83-1 [186 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:130 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.027-1 [11.8 kB] Get:131 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:132 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:133 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:134 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:135 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-xs-perl arm64 0.59-1+b1 [33.1 kB] Get:136 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:137 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.16-2 [38.5 kB] Get:138 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b2 [50.7 kB] Get:139 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2.1+b2 [33.8 kB] Get:140 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:141 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002005-1 [19.5 kB] Get:142 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get:143 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:144 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:145 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-3 [6996 B] Get:146 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.6.2-1+b1 [141 kB] Get:147 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:148 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-4+b1 [11.3 kB] Get:149 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.28-1+b3 [12.4 kB] Get:150 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:151 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.150-1 [56.4 kB] Get:152 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b6 [17.6 kB] Get:153 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b5 [11.5 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.637-1+b4 [41.1 kB] Get:155 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:156 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.006+ds-1+b1 [97.2 kB] Get:157 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.006+ds-1+b1 [99.3 kB] Get:158 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:159 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.49-1+b1 [64.4 kB] Get:160 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.31-1+b1 [27.0 kB] Get:161 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b6 [24.5 kB] Get:162 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b6 [8868 B] Get:163 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.18-1+b2 [13.3 kB] Get:164 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2+b3 [173 kB] Get:165 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:166 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.46-1+b1 [77.5 kB] Get:167 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.75-1+b1 [27.8 kB] Get:168 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.22-1 [117 kB] Get:169 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:170 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:171 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-5 [53.6 kB] Get:172 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-8+b1 [299 kB] Get:173 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-2+b1 [47.8 kB] Get:174 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.910.0+ds-1+b1 [44.9 kB] Get:175 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.13-2 [64.5 kB] Get:176 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2+b2 [82.0 kB] Get:177 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.5-1 [81.0 kB] Get:178 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4+b2 [57.5 kB] Get:179 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-31 [163 kB] Get:180 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.141.0 [1038 kB] Preconfiguring packages ... Fetched 23.8 MB in 0s (56.0 MB/s) Selecting previously unselected package netbase. (Reading database ... 20104 files and directories currently installed.) Preparing to unpack .../000-netbase_6.6_all.deb ... Unpacking netbase (6.6) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../001-libncursesw6_6.6+20260608-2_arm64.deb ... Unpacking libncursesw6:arm64 (6.6+20260608-2) ... Selecting previously unselected package libproc2-1:arm64. Preparing to unpack .../002-libproc2-1_2%3a4.0.7-1_arm64.deb ... Unpacking libproc2-1:arm64 (2:4.0.7-1) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.7-1_arm64.deb ... Unpacking procps (2:4.0.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../004-readline-common_8.3-4_all.deb ... Unpacking readline-common (8.3-4) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.6.4-1_arm64.deb ... Unpacking openssl (3.6.4-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20260816_all.deb ... Unpacking ca-certificates (20260816) ... Selecting previously unselected package libtext-charwidth-perl:arm64. Preparing to unpack .../007-libtext-charwidth-perl_0.04-12+b1_arm64.deb ... Unpacking libtext-charwidth-perl:arm64 (0.04-12+b1) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../008-libtext-wrapi18n-perl_0.06-11_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-11) ... Selecting previously unselected package ucf. Preparing to unpack .../009-ucf_3.0056_all.deb ... Moving old data out of the way Unpacking ucf (3.0056) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../010-libffi8_3.8.0-2_arm64.deb ... Unpacking libffi8:arm64 (3.8.0-2) ... Selecting previously unselected package libglib2.0-0t64:arm64. Preparing to unpack .../011-libglib2.0-0t64_2.90.0-1_arm64.deb ... Unpacking libglib2.0-0t64:arm64 (2.90.0-1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../012-shared-mime-info_2.4-5+b4_arm64.deb ... Unpacking shared-mime-info (2.4-5+b4) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../013-libnghttp3-9_1.17.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.17.0-1) ... Selecting previously unselected package libngtcp2-16:arm64. Preparing to unpack .../014-libngtcp2-16_1.24.0-1_arm64.deb ... Unpacking libngtcp2-16:arm64 (1.24.0-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../015-libbrotli1_1.2.0-4+b1_arm64.deb ... Unpacking libbrotli1:arm64 (1.2.0-4+b1) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../016-libidn2-0_2.3.8-5_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-5) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../017-libp11-kit0_0.26.5-1_arm64.deb ... Unpacking libp11-kit0:arm64 (0.26.5-1) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../018-libtasn1-6_4.21.0-2+b1_arm64.deb ... Unpacking libtasn1-6:arm64 (4.21.0-2+b1) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../019-libgnutls30t64_3.8.13-1_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.13-1) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../020-libkrb5support0_1.22.1-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.22.1-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../021-libcom-err2_1.47.4-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.4-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../022-libk5crypto3_1.22.1-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.22.1-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../023-libkeyutils1_1.6.3-6+b2_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6+b2) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../024-libkrb5-3_1.22.1-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.22.1-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../025-libgssapi-krb5-2_1.22.1-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.22.1-3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../026-libsasl2-modules-db_2.1.28+dfsg1-11_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-11) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../027-libsasl2-2_2.1.28+dfsg1-11_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-11) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../028-libldap2_2.6.14+dfsg-2_arm64.deb ... Unpacking libldap2:arm64 (2.6.14+dfsg-2) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../029-libnghttp2-14_1.70.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.70.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:arm64. Preparing to unpack .../030-libngtcp2-crypto-gnutls8_1.24.0-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.24.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../031-libpsl5t64_0.23.3-1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.23.3-1) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../032-libssh2-1t64_1.11.1-6_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-6) ... Selecting previously unselected package libcurl4-gnutls:arm64. Preparing to unpack .../033-libcurl4-gnutls_8.23.0~rc1-2_arm64.deb ... Unpacking libcurl4-gnutls:arm64 (8.23.0~rc1-2) ... Selecting previously unselected package libfyaml0:arm64. Preparing to unpack .../034-libfyaml0_0.9.4-1_arm64.deb ... Unpacking libfyaml0:arm64 (0.9.4-1) ... Selecting previously unselected package libstemmer0d:arm64. Preparing to unpack .../035-libstemmer0d_3.1.1-1_arm64.deb ... Unpacking libstemmer0d:arm64 (3.1.1-1) ... Selecting previously unselected package libxmlb2:arm64. Preparing to unpack .../036-libxmlb2_0.3.29-1_arm64.deb ... Unpacking libxmlb2:arm64 (0.3.29-1) ... Selecting previously unselected package libappstream5:arm64. Preparing to unpack .../037-libappstream5_1.2.0-2_arm64.deb ... Unpacking libappstream5:arm64 (1.2.0-2) ... Selecting previously unselected package appstream. Preparing to unpack .../038-appstream_1.2.0-2_arm64.deb ... Unpacking appstream (1.2.0-2) ... Selecting previously unselected package diffstat. Preparing to unpack .../039-diffstat_1.69-1_arm64.deb ... Unpacking diffstat (1.69-1) ... Selecting previously unselected package distro-info-data. 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../045-gpgconf_2.4.9-7+b1_arm64.deb ... Unpacking gpgconf (2.4.9-7+b1) ... Selecting previously unselected package libksba8:arm64. Preparing to unpack .../046-libksba8_1.8.1-1_arm64.deb ... Unpacking libksba8:arm64 (1.8.1-1) ... Selecting previously unselected package libnpth0t64:arm64. 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Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../069-libclass-data-inheritable-perl_0.10-1_all.deb ... Unpacking libclass-data-inheritable-perl (0.10-1) ... Selecting previously unselected package libclass-inspector-perl. Preparing to unpack .../070-libclass-inspector-perl_1.36-3_all.deb ... Unpacking libclass-inspector-perl (1.36-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../071-libclass-method-modifiers-perl_2.15-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.15-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../072-libclass-xsaccessor-perl_1.19-4+b8_arm64.deb ... Unpacking libclass-xsaccessor-perl (1.19-4+b8) ... Selecting previously unselected package libclone-perl:arm64. Preparing to unpack .../073-libclone-perl_0.50-1+b2_arm64.deb ... Unpacking libclone-perl:arm64 (0.50-1+b2) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../074-libconfig-tiny-perl_2.30-1_all.deb ... Unpacking libconfig-tiny-perl (2.30-1) ... Selecting previously unselected package libparams-someutil-perl. Preparing to unpack .../075-libparams-someutil-perl_1.11-1_arm64.deb ... Unpacking libparams-someutil-perl (1.11-1) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../076-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../077-libdata-optlist-perl_0.115-1_all.deb ... Unpacking libdata-optlist-perl (0.115-1) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../078-libparams-util-perl_1.102-3+b3_arm64.deb ... Unpacking libparams-util-perl (1.102-3+b3) ... Selecting previously unselected package libsub-exporter-perl. 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Selecting previously unselected package libnet-ipv6addr-perl. Preparing to unpack .../090-libnet-ipv6addr-perl_1.02-1_all.deb ... Unpacking libnet-ipv6addr-perl (1.02-1) ... Selecting previously unselected package libnet-netmask-perl. Preparing to unpack .../091-libnet-netmask-perl_2.0003-1_all.deb ... Unpacking libnet-netmask-perl (2.0003-1) ... Selecting previously unselected package libnetaddr-ip-perl. Preparing to unpack .../092-libnetaddr-ip-perl_4.079+dfsg-2+b7_arm64.deb ... Unpacking libnetaddr-ip-perl (4.079+dfsg-2+b7) ... Selecting previously unselected package libdata-validate-ip-perl. Preparing to unpack .../093-libdata-validate-ip-perl_0.31-1_all.deb ... Unpacking libdata-validate-ip-perl (0.31-1) ... Selecting previously unselected package libdata-validate-uri-perl. Preparing to unpack .../094-libdata-validate-uri-perl_0.07-3_all.deb ... Unpacking libdata-validate-uri-perl (0.07-3) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../095-libdevel-size-perl_0.87-1+b1_arm64.deb ... Unpacking libdevel-size-perl (0.87-1+b1) ... Selecting previously unselected package libdistro-info-perl. Preparing to unpack .../096-libdistro-info-perl_1.17_all.deb ... Unpacking libdistro-info-perl (1.17) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../097-libemail-address-xs-perl_1.05-1+b6_arm64.deb ... Unpacking libemail-address-xs-perl (1.05-1+b6) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../098-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../099-libipc-system-simple-perl_1.30-2_all.deb ... Unpacking libipc-system-simple-perl (1.30-2) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../100-libfile-basedir-perl_0.09-2_all.deb ... Unpacking libfile-basedir-perl (0.09-2) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../101-libnumber-compare-perl_0.03-3_all.deb ... Unpacking libnumber-compare-perl (0.03-3) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../102-libtext-glob-perl_0.11-3_all.deb ... Unpacking libtext-glob-perl (0.11-3) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../103-libfile-find-rule-perl_0.35-1_all.deb ... Unpacking libfile-find-rule-perl (0.35-1) ... Selecting previously unselected package libfile-libmagic-perl. Preparing to unpack .../104-libfile-libmagic-perl_1.23-2+b4_arm64.deb ... Unpacking libfile-libmagic-perl (1.23-2+b4) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../105-libtimedate-perl_2.3500-1_all.deb ... Unpacking libtimedate-perl (2.3500-1) ... Selecting previously unselected package libhttp-date-perl. 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Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../112-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../113-libhttp-message-perl_7.04-1_all.deb ... Unpacking libhttp-message-perl (7.04-1) ... Selecting previously unselected package libhtml-form-perl. Preparing to unpack .../114-libhtml-form-perl_6.13-1_all.deb ... Unpacking libhtml-form-perl (6.13-1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../115-libhtml-html5-entities-perl_0.004-3_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-3) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../116-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libhttp-cookies-perl. 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Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../128-libio-interactive-perl_1.027-1_all.deb ... Unpacking libio-interactive-perl (1.027-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../129-libipc-run3-perl_0.049-1_all.deb ... Unpacking libipc-run3-perl (0.049-1) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../130-libjson-maybexs-perl_1.004008-1_all.deb ... Unpacking libjson-maybexs-perl (1.004008-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../131-liblist-compare-perl_0.55-2_all.deb ... Unpacking liblist-compare-perl (0.55-2) ... Selecting previously unselected package liblist-someutils-perl. Preparing to unpack .../132-liblist-someutils-perl_0.59-1_all.deb ... Unpacking liblist-someutils-perl (0.59-1) ... Selecting previously unselected package liblist-someutils-xs-perl:arm64. 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Setting up plzip (1.13-2) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libtext-charwidth-perl:arm64 (0.04-12+b1) ... Setting up libnpth0t64:arm64 (1.8-4) ... Setting up libkeyutils1:arm64 (1.6.3-6+b2) ... Setting up libunicode-utf8-perl (0.75-1+b1) ... Setting up libmouse-perl:arm64 (2.6.2-1+b1) ... Setting up libgpg-error0:arm64 (1.61-5) ... Setting up libdata-messagepack-perl (1.02-3+b2) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.50-1+b2) ... Setting up libyaml-0-2:arm64 (0.2.5-2+b1) ... Setting up libsub-identify-perl (0.14-4+b1) ... Setting up distro-info-data (2026.08.20-1) ... Setting up libcpanel-json-xs-perl:arm64 (4.51-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.87-1+b1) ... Setting up unzip (6.0-31) ... Setting up libbrotli1:arm64 (1.2.0-4+b1) ... Setting up libsqlite3-0:arm64 (3.53.4-2) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.910.0+ds-1+b1) ... Setting up libio-interactive-perl (1.027-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:arm64 (1.70.0-1) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:arm64 (1.12.3-2) ... Setting up liblzo2-2:arm64 (2.10-3+b2) ... Setting up libtime-moment-perl (0.46-1+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:arm64 (2.3.8-5) ... Setting up libcom-err2:arm64 (1.47.4-1+b1) ... Setting up libparams-someutil-perl (1.11-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.006+ds-1+b1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libtext-wrapi18n-perl (0.06-11) ... Setting up libnet-netmask-perl (2.0003-1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libfyaml0:arm64 (0.9.4-1) ... Setting up libkrb5support0:arm64 (1.22.1-3) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-11) ... Setting up patchutils (0.4.5-1) ... Setting up libjson-maybexs-perl (1.004008-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b7) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libproc2-1:arm64 (2:4.0.7-1) ... Setting up libfile-find-rule-perl (0.35-1) ... 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Setting up libffi8:arm64 (3.8.0-2) ... Setting up libdata-validate-domain-perl (0.15-1) ... Setting up libproc-processtable-perl:arm64 (0.637-1+b4) ... Setting up libpath-tiny-perl (0.150-1) ... Setting up lzop (1.04-2+b2) ... Setting up libassuan9:arm64 (3.0.2-2+b2) ... Setting up procps (2:4.0.7-1) ... Setting up librole-tiny-perl (2.002005-1) ... Setting up libtasn1-6:arm64 (4.21.0-2+b1) ... Setting up libipc-run3-perl (0.049-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.6) ... Setting up libngtcp2-16:arm64 (1.24.0-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006009-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b8) ... Setting up libkrb5-3:arm64 (1.22.1-3) ... Setting up libstemmer0d:arm64 (3.1.1-1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libssh2-1t64:arm64 (1.11.1-6) ... Setting up libterm-readkey-perl (2.38-2+b6) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.6.4-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b6) ... Setting up libperlio-gzip-perl (0.20-1+b6) ... Setting up readline-common (8.3-4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.006+ds-1+b1) ... Setting up libmarkdown2:arm64 (2.2.7-2.1+b2) ... Setting up libldap2:arm64 (2.6.14+dfsg-2) ... Setting up liburi-perl (5.37-1) ... Setting up iso-codes (4.20.1-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libsub-exporter-perl (0.990-1.1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b6) ... Setting up libnet-ssleay-perl:arm64 (1.96-2) ... Setting up libksba8:arm64 (1.8.1-1) ... Setting up libhttp-date-perl (6.08-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libdistro-info-perl (1.17) ... Setting up libpsl5t64:arm64 (0.23.3-1) ... Setting up libnet-http-perl (6.24-1) ... Setting up libtext-markdown-discount-perl (0.18-1+b2) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-3+b1) ... Setting up ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 121 added, 0 removed; done. Setting up libglib2.0-0t64:arm64 (2.90.0-1) ... No schema files found: doing nothing. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.49-1+b1) ... Setting up shared-mime-info (2.4-5+b4) ... Setting up libp11-kit0:arm64 (0.26.5-1) ... Setting up libgssapi-krb5-2:arm64 (1.22.1-3) ... Setting up ucf (3.0056) ... Setting up libreadline8t64:arm64 (8.3-4) ... Setting up libwww-robotrules-perl (6.03-1) ... Setting up libsyntax-keyword-try-perl (0.31-1+b1) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libhtml-parser-perl:arm64 (3.83-2+b2) ... Setting up gpgconf (2.4.9-7+b1) ... Setting up libio-socket-ssl-perl (2.099-1) ... Setting up gpg (2.4.9-7+b1) ... Setting up libhttp-message-perl (7.04-1) ... Setting up libhtml-form-perl (6.13-1) ... Setting up libgnutls30t64:arm64 (3.8.13-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.12-2) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxmlb2:arm64 (0.3.29-1) ... Setting up libparams-classify-perl:arm64 (0.015-2+b7) ... Setting up libcgi-pm-perl (4.72-1) ... Setting up libxml-sax-perl (1.02+dfsg-5) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libmodule-runtime-perl (0.018-1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-8+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libdata-dpath-perl (0.60-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.24.0-1) ... Setting up libcurl4-gnutls:arm64 (8.23.0~rc1-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libappstream5:arm64 (1.2.0-2) ... Setting up liblist-someutils-xs-perl:arm64 (0.59-1+b1) ... Setting up appstream (1.2.0-2) ... ✔ Metadata cache was updated successfully. Setting up libmoox-aliases-perl (0.001006-3) ... Setting up libb-hooks-endofscope-perl (0.28-2) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.15-1) ... Setting up libwww-perl (6.83-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.22-1) ... Setting up lintian (2.141.0) ... Setting up sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.43-6) ... Processing triggers for man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20260816) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build Thu, 24 Sep 2026 19:31:15 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Thu, 24 Sep 2026 19:31:15 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Thu, 24 Sep 2026 19:31:19 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 489 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 57 Job: htslib_1.24-3 Lintian: pass Machine Architecture: arm64 Package: htslib Package-Time: 591 Source-Version: 1.24-3 Space: n/a Status: successful Version: 1.24-3 -------------------------------------------------------------------------------- Finished at 2026-09-24T19:30:01Z Build needed 00:09:51, no disk space