sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | hyphy 2.3.14+dfsg-2 (arm64) Mon, 22 Jul 2019 07:46:32 +0000 | +==============================================================================+ Package: hyphy Version: 2.3.14+dfsg-2 Source Version: 2.3.14+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-a17ad644-b1f8-426f-bb43-6625803c5892' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://debian.oregonstate.edu/debian unstable InRelease Get:2 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8192 kB] Fetched 8192 kB in 2s (3840 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'hyphy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/hyphy.git Please use: git clone https://salsa.debian.org/med-team/hyphy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 4587 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main hyphy 2.3.14+dfsg-2 (dsc) [2162 B] Get:2 http://debian.oregonstate.edu/debian unstable/main hyphy 2.3.14+dfsg-2 (tar) [4575 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main hyphy 2.3.14+dfsg-2 (diff) [9624 B] Fetched 4587 kB in 0s (51.7 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/hyphy-6sxqJZ/hyphy-2.3.14+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/hyphy-6sxqJZ' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-FaTYwI/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-FaTYwI/apt_archive ./ InRelease Get:2 copy:/<>/resolver-FaTYwI/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-FaTYwI/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-FaTYwI/apt_archive ./ Sources [362 B] Get:5 copy:/<>/resolver-FaTYwI/apt_archive ./ Packages [451 B] Fetched 1770 B in 0s (94.4 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-9-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-arm64-cross libgcc1-dbg-arm64-cross libgomp1-dbg-arm64-cross libitm1-dbg-arm64-cross libatomic1-dbg-arm64-cross libasan5-dbg-arm64-cross liblsan0-dbg-arm64-cross libtsan0-dbg-arm64-cross libubsan1-dbg-arm64-cross libmpx2-dbg-arm64-cross libquadmath0-dbg-arm64-cross manpages-dev autoconf automake libtool flex bison gdb-aarch64-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-9-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sbuild-build-depends-core-dummy:arm64 sensible-utils ucf 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 42.3 MB of archives. After this operation, 162 MB of additional disk space will be used. Get:1 copy:/<>/resolver-FaTYwI/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-3 [253 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-3 [119 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-3 [68.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.32.51.20190707-1 [2960 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu-base amd64 8.3.0-19cross1 [192 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-aarch64-linux-gnu amd64 8.3.0-19cross1 [6244 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-19cross1 [187 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.1.0-8cross1 [185 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.28-10cross3 [1312 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-arm64-cross all 1:9.1.0-8cross1 [34.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 9.1.0-8cross1 [76.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 9.1.0-8cross1 [24.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 9.1.0-8cross1 [8644 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.1.0-8cross1 [347 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 9.1.0-8cross1 [121 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 9.1.0-8cross1 [267 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 9.1.0-8cross1 [416 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 9.1.0-8cross1 [117 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-arm64-cross all 8.3.0-19cross1 [828 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu amd64 8.3.0-19cross1 [6687 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:8.3.0-1 [1456 B] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 4.19.37-5cross3 [1252 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.28-10cross3 [2322 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-arm64-cross all 8.3.0-19cross1 [1490 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-aarch64-linux-gnu amd64 8.3.0-19cross1 [6819 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:8.3.0-1 [1176 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.6 [6572 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 42.3 MB in 1s (64.7 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11960 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.37-3_amd64.deb ... Unpacking libmagic-mgc (1:5.37-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.37-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.37-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.37-3_amd64.deb ... Unpacking file (1:5.37-3) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.37-3) ... Setting up gcc-8-cross-base (8.3.0-19cross1) ... Setting up libmagic1:amd64 (1:5.37-3) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up binutils-aarch64-linux-gnu (2.32.51.20190707-1) ... Setting up file (1:5.37-3) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up gcc-8-aarch64-linux-gnu-base:amd64 (8.3.0-19cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-3) ... Setting up libc6-arm64-cross (2.28-10cross3) ... Setting up cpp-8-aarch64-linux-gnu (8.3.0-19cross1) ... Setting up gcc-9-cross-base (9.1.0-8cross1) ... Setting up linux-libc-dev-arm64-cross (4.19.37-5cross3) ... Setting up sensible-utils (0.0.12) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libatomic1-arm64-cross (9.1.0-8cross1) ... Setting up libgcc1-arm64-cross (1:9.1.0-8cross1) ... Setting up liblsan0-arm64-cross (9.1.0-8cross1) ... Setting up libgomp1-arm64-cross (9.1.0-8cross1) ... Setting up libtsan0-arm64-cross (9.1.0-8cross1) ... Setting up libc6-dev-arm64-cross (2.28-10cross3) ... Setting up libasan5-arm64-cross (9.1.0-8cross1) ... Setting up libstdc++6-arm64-cross (9.1.0-8cross1) ... Setting up cpp-aarch64-linux-gnu (4:8.3.0-1) ... Setting up libitm1-arm64-cross (9.1.0-8cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up libubsan1-arm64-cross (9.1.0-8cross1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-8-dev-arm64-cross (8.3.0-19cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-8-aarch64-linux-gnu (8.3.0-19cross1) ... Setting up libstdc++-8-dev-arm64-cross (8.3.0-19cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-aarch64-linux-gnu (4:8.3.0-1) ... Setting up g++-8-aarch64-linux-gnu (8.3.0-19cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-aarch64-linux-gnu (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.6) ... Setting up sbuild-build-depends-core-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-FaTYwI/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-FaTYwI/apt_archive ./ InRelease Get:2 copy:/<>/resolver-FaTYwI/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-FaTYwI/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-FaTYwI/apt_archive ./ Sources [484 B] Get:5 copy:/<>/resolver-FaTYwI/apt_archive ./ Packages [570 B] Fetched 2017 B in 0s (100 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:arm64 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-FaTYwI/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:arm64. (Reading database ... 15246 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), cmake (>= 3.0), mpi-default-dev, libcurl4-gnutls-dev | libcurl4-dev, libssl-dev, libsqlite3-dev Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), cmake (>= 3.0), mpi-default-dev, libcurl4-gnutls-dev, libssl-dev, libsqlite3-dev dpkg-deb: building package 'sbuild-build-depends-hyphy-dummy' in '/<>/resolver-FaTYwI/apt_archive/sbuild-build-depends-hyphy-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-hyphy-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-FaTYwI/apt_archive ./ InRelease Get:2 copy:/<>/resolver-FaTYwI/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-FaTYwI/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-FaTYwI/apt_archive ./ Sources [680 B] Get:5 copy:/<>/resolver-FaTYwI/apt_archive ./ Packages [756 B] Fetched 2399 B in 0s (123 kB/s) Reading package lists... Reading package lists... Install hyphy build dependencies (apt-based resolver) ----------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gcc-9-base:arm64 gettext gettext-base groff-base ibverbs-providers:arm64 intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libatomic1:arm64 libbsd0 libc6:arm64 libc6-dev:arm64 libcom-err2:arm64 libcroco3 libcurl3-gnutls:arm64 libcurl4 libcurl4-gnutls-dev:arm64 libdb5.3:arm64 libedit2 libelf1 libevent-2.1-6:arm64 libevent-core-2.1-6:arm64 libevent-pthreads-2.1-6:arm64 libexpat1 libffi6:arm64 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhogweed4:arm64 libhwloc-dev:arm64 libhwloc-plugins:arm64 libhwloc5:arm64 libibverbs-dev:arm64 libibverbs1:arm64 libicu63:arm64 libidn2-0:arm64 libitm1:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblsan0:arm64 libltdl-dev:arm64 libltdl7:arm64 liblzma5:arm64 libncurses6 libnettle6:arm64 libnghttp2-14 libnghttp2-14:arm64 libnl-3-200:arm64 libnl-3-dev:arm64 libnl-route-3-200:arm64 libnl-route-3-dev:arm64 libnuma-dev:arm64 libnuma1:arm64 libopenmpi-dev:arm64 libopenmpi3:arm64 libp11-kit0:arm64 libpciaccess0:arm64 libpipeline1 libpmix2:arm64 libprocps7 libpsl5 libpsl5:arm64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0:arm64 libsqlite3-dev:arm64 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-8-dev:arm64 libstdc++6:arm64 libsub-override-perl libtasn1-6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 libunistring2:arm64 libuv1 libxml2:arm64 linux-libc-dev:arm64 lsb-base m4 man-db mpi-default-dev:arm64 ocl-icd-libopencl1:arm64 openmpi-bin:arm64 openmpi-common openssh-client po-debconf procps zlib1g:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:arm64 libc-l10n:arm64 locales:arm64 manpages-dev:arm64 libcurl4-doc:arm64 libgnutls28-dev:arm64 libidn11-dev:arm64 libkrb5-dev:arm64 libldap2-dev:arm64 librtmp-dev:arm64 libssh2-1-dev:arm64 pkg-config:arm64 zlib1g-dev:arm64 rng-tools:arm64 gnutls-bin:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhwloc-contrib-plugins:arm64 libtool-doc:arm64 openmpi-doc:arm64 pciutils:arm64 sqlite3-doc:arm64 libssl-doc:arm64 libstdc++-8-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd:arm64 gfortran:arm64 | fortran-compiler:arm64 keychain libpam-ssh monkeysphere ssh-askpass libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:arm64 ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:arm64 krb5-locales krb5-locales:arm64 libgpm2 libcoarrays-openmpi-dev:arm64 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libltdl-dev xauth libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gcc-9-base:arm64 gettext gettext-base groff-base ibverbs-providers:arm64 intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libatomic1:arm64 libbsd0 libc6:arm64 libc6-dev:arm64 libcom-err2:arm64 libcroco3 libcurl3-gnutls:arm64 libcurl4 libcurl4-gnutls-dev:arm64 libdb5.3:arm64 libedit2 libelf1 libevent-2.1-6:arm64 libevent-core-2.1-6:arm64 libevent-pthreads-2.1-6:arm64 libexpat1 libffi6:arm64 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhogweed4:arm64 libhwloc-dev:arm64 libhwloc-plugins:arm64 libhwloc5:arm64 libibverbs-dev:arm64 libibverbs1:arm64 libicu63:arm64 libidn2-0:arm64 libitm1:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblsan0:arm64 libltdl-dev:arm64 libltdl7:arm64 liblzma5:arm64 libncurses6 libnettle6:arm64 libnghttp2-14 libnghttp2-14:arm64 libnl-3-200:arm64 libnl-3-dev:arm64 libnl-route-3-200:arm64 libnl-route-3-dev:arm64 libnuma-dev:arm64 libnuma1:arm64 libopenmpi-dev:arm64 libopenmpi3:arm64 libp11-kit0:arm64 libpciaccess0:arm64 libpipeline1 libpmix2:arm64 libprocps7 libpsl5 libpsl5:arm64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libsqlite3-0:arm64 libsqlite3-dev:arm64 libssh2-1 libssh2-1:arm64 libssl-dev:arm64 libssl1.1 libssl1.1:arm64 libstdc++-8-dev:arm64 libstdc++6:arm64 libsub-override-perl libtasn1-6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 libunistring2:arm64 libuv1 libxml2:arm64 linux-libc-dev:arm64 lsb-base m4 man-db mpi-default-dev:arm64 ocl-icd-libopencl1:arm64 openmpi-bin:arm64 openmpi-common openssh-client po-debconf procps sbuild-build-depends-hyphy-dummy:arm64 zlib1g:arm64 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 56.1 MB of archives. After this operation, 227 MB of additional disk space will be used. Get:1 copy:/<>/resolver-FaTYwI/apt_archive ./ sbuild-build-depends-hyphy-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.1.0-10 [190 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20190713-1 [102 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libedit2 amd64 3.1-20190324-1 [94.3 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-5 [64.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-5 [116 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1c-1 [1535 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-5 [367 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-5 [156 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 openssh-client amd64 1:8.0p1-3 [808 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.3.3-4 [314 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [69.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [106 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3 [224 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.37.0-1 [83.3 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.65.1-1 [335 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.7-1 [106 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.24.1-1 [110 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.2.3-1 [21.1 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.2.3-1 [13.8 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12.20190716-1 [80.7 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.60.5-1 [1293 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.2.3 [1026 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-8-base arm64 8.3.0-19 [192 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc1 arm64 1:9.1.0-10 [34.1 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.28-10 [2521 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main arm64 libnl-3-200 arm64 3.4.0-1 [54.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main arm64 libnl-route-3-200 arm64 3.4.0-1 [134 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main arm64 libibverbs1 arm64 24.0-2 [48.6 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main arm64 ibverbs-providers arm64 24.0-2 [217 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.1.0-10 [354 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 9.1.0-10 [8828 B] Get:67 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 4.19.37-6 [1165 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.28-10 [2324 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.45.2-1 [69.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main arm64 libgmp10 arm64 2:6.1.2+dfsg-4 [226 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main arm64 libnettle6 arm64 3.4.1-1 [225 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main arm64 libhogweed4 arm64 3.4.1-1 [138 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main arm64 libunistring2 arm64 0.9.10-2 [381 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main arm64 libidn2-0 arm64 2.2.0-1 [82.0 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main arm64 libffi6 arm64 3.2.1-9 [19.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main arm64 libp11-kit0 arm64 0.23.15-2 [302 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main arm64 libtasn1-6 arm64 4.13-4 [50.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main arm64 libgnutls30 arm64 3.6.8-2 [1072 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.17-5 [63.7 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.17-5 [117 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1c-1 [1376 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.17-5 [351 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.17-5 [148 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.6 [622 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1 [69.2 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1 [105 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3 [216 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main arm64 libnghttp2-14 arm64 1.37.0-1 [80.1 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-1 [89.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main arm64 libgpg-error0 arm64 1.36-7 [68.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main arm64 libgcrypt20 arm64 1.8.4-5 [487 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main arm64 libcurl3-gnutls arm64 7.65.1-1 [313 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main arm64 libcurl4-gnutls-dev arm64 7.65.1-1 [412 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main arm64 libevent-2.1-6 arm64 2.1.8-stable-4 [150 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main arm64 libevent-core-2.1-6 arm64 2.1.8-stable-4 [112 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main arm64 libevent-pthreads-2.1-6 arm64 2.1.8-stable-4 [47.7 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 9.1.0-10 [78.4 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 9.1.0-10 [24.7 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 9.1.0-10 [122 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 9.1.0-10 [274 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 9.1.0-10 [454 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 9.1.0-10 [117 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-8-dev arm64 8.3.0-19 [835 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main arm64 libgfortran5 arm64 9.1.0-10 [322 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main arm64 libltdl7 arm64 2.4.6-10 [389 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main arm64 libnuma1 arm64 2.0.12-1 [25.6 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main arm64 libhwloc5 arm64 1.11.12-3 [97.9 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main arm64 libnuma-dev arm64 2.0.12-1 [40.0 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main arm64 libltdl-dev arm64 2.4.6-10 [162 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main arm64 libhwloc-dev arm64 1.11.12-3 [165 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main arm64 libpciaccess0 arm64 0.14-1 [51.0 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main arm64 libicu63 arm64 63.2-2 [8157 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma5 arm64 5.2.4-1 [149 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.2.12-2 [37.4 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main arm64 libhwloc-plugins arm64 1.11.12-3 [16.9 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main arm64 libnl-3-dev arm64 3.4.0-1 [98.2 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main arm64 libnl-route-3-dev arm64 3.4.0-1 [162 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main arm64 libibverbs-dev arm64 24.0-2 [425 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main arm64 libpmix2 arm64 3.1.4~rc1-1 [463 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 libopenmpi3 arm64 3.1.3-11 [1996 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main amd64 openmpi-common all 3.1.3-11 [165 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 openmpi-bin arm64 3.1.3-11 [199 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 libopenmpi-dev arm64 3.1.3-11 [974 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libsqlite3-0 arm64 3.29.0-1 [609 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libsqlite3-dev arm64 3.29.0-1 [751 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libssl-dev arm64 1.1.1c-1 [1680 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-8-dev arm64 8.3.0-19 [1491 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main arm64 mpi-default-dev arm64 1.13 [5476 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 56.1 MB in 1s (47.0 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15246 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... 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Selecting previously unselected package libedit2:amd64. Preparing to unpack .../012-libedit2_3.1-20190324-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20190324-1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../013-libkeyutils1_1.6-6_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../014-libkrb5support0_1.17-5_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-5) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../015-libk5crypto3_1.17-5_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-5) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../016-libssl1.1_1.1.1c-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1c-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../017-libkrb5-3_1.17-5_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-5) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../018-libgssapi-krb5-2_1.17-5_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-5) ... Selecting previously unselected package openssh-client. Preparing to unpack .../019-openssh-client_1%3a8.0p1-3_amd64.deb ... Unpacking openssh-client (1:8.0p1-3) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../020-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../021-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../022-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../023-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. 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Selecting previously unselected package po-debconf. Preparing to unpack .../054-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../055-debhelper_12.2.3_all.deb ... Unpacking debhelper (12.2.3) ... Selecting previously unselected package gcc-8-base:arm64. Preparing to unpack .../056-gcc-8-base_8.3.0-19_arm64.deb ... Unpacking gcc-8-base:arm64 (8.3.0-19) ... Selecting previously unselected package libgcc1:arm64. Preparing to unpack .../057-libgcc1_1%3a9.1.0-10_arm64.deb ... Unpacking libgcc1:arm64 (1:9.1.0-10) ... Selecting previously unselected package libc6:arm64. Preparing to unpack .../058-libc6_2.28-10_arm64.deb ... Unpacking libc6:arm64 (2.28-10) ... Selecting previously unselected package libnl-3-200:arm64. Preparing to unpack .../059-libnl-3-200_3.4.0-1_arm64.deb ... Unpacking libnl-3-200:arm64 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-200:arm64. Preparing to unpack .../060-libnl-route-3-200_3.4.0-1_arm64.deb ... Unpacking libnl-route-3-200:arm64 (3.4.0-1) ... Selecting previously unselected package libibverbs1:arm64. Preparing to unpack .../061-libibverbs1_24.0-2_arm64.deb ... Unpacking libibverbs1:arm64 (24.0-2) ... Selecting previously unselected package ibverbs-providers:arm64. Preparing to unpack .../062-ibverbs-providers_24.0-2_arm64.deb ... Unpacking ibverbs-providers:arm64 (24.0-2) ... Selecting previously unselected package libasan5:arm64. Preparing to unpack .../063-libasan5_9.1.0-10_arm64.deb ... Unpacking libasan5:arm64 (9.1.0-10) ... Selecting previously unselected package libatomic1:arm64. Preparing to unpack .../064-libatomic1_9.1.0-10_arm64.deb ... Unpacking libatomic1:arm64 (9.1.0-10) ... Selecting previously unselected package linux-libc-dev:arm64. Preparing to unpack .../065-linux-libc-dev_4.19.37-6_arm64.deb ... Unpacking linux-libc-dev:arm64 (4.19.37-6) ... Selecting previously unselected package libc6-dev:arm64. Preparing to unpack .../066-libc6-dev_2.28-10_arm64.deb ... Unpacking libc6-dev:arm64 (2.28-10) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../067-libcom-err2_1.45.2-1_arm64.deb ... Unpacking libcom-err2:arm64 (1.45.2-1) ... Selecting previously unselected package libgmp10:arm64. Preparing to unpack .../068-libgmp10_2%3a6.1.2+dfsg-4_arm64.deb ... Unpacking libgmp10:arm64 (2:6.1.2+dfsg-4) ... Selecting previously unselected package libnettle6:arm64. Preparing to unpack .../069-libnettle6_3.4.1-1_arm64.deb ... Unpacking libnettle6:arm64 (3.4.1-1) ... Selecting previously unselected package libhogweed4:arm64. Preparing to unpack .../070-libhogweed4_3.4.1-1_arm64.deb ... Unpacking libhogweed4:arm64 (3.4.1-1) ... Selecting previously unselected package libunistring2:arm64. Preparing to unpack .../071-libunistring2_0.9.10-2_arm64.deb ... Unpacking libunistring2:arm64 (0.9.10-2) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../072-libidn2-0_2.2.0-1_arm64.deb ... Unpacking libidn2-0:arm64 (2.2.0-1) ... Selecting previously unselected package libffi6:arm64. Preparing to unpack .../073-libffi6_3.2.1-9_arm64.deb ... Unpacking libffi6:arm64 (3.2.1-9) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../074-libp11-kit0_0.23.15-2_arm64.deb ... Unpacking libp11-kit0:arm64 (0.23.15-2) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../075-libtasn1-6_4.13-4_arm64.deb ... Unpacking libtasn1-6:arm64 (4.13-4) ... Selecting previously unselected package libgnutls30:arm64. Preparing to unpack .../076-libgnutls30_3.6.8-2_arm64.deb ... Unpacking libgnutls30:arm64 (3.6.8-2) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../077-libkeyutils1_1.6-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6-6) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../078-libkrb5support0_1.17-5_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-5) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../079-libk5crypto3_1.17-5_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-5) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../080-libssl1.1_1.1.1c-1_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1c-1) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../081-libkrb5-3_1.17-5_arm64.deb ... Unpacking libkrb5-3:arm64 (1.17-5) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../082-libgssapi-krb5-2_1.17-5_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.17-5) ... Selecting previously unselected package libdb5.3:arm64. Preparing to unpack .../083-libdb5.3_5.3.28+dfsg1-0.6_arm64.deb ... Unpacking libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../084-libsasl2-modules-db_2.1.27+dfsg-1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../085-libsasl2-2_2.1.27+dfsg-1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-1) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../086-libldap-2.4-2_2.4.47+dfsg-3_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.47+dfsg-3) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../087-libnghttp2-14_1.37.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.37.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../088-libpsl5_0.20.2-2_arm64.deb ... Unpacking libpsl5:arm64 (0.20.2-2) ... Selecting previously unselected package zlib1g:arm64. Preparing to unpack .../089-zlib1g_1%3a1.2.11.dfsg-1_arm64.deb ... Unpacking zlib1g:arm64 (1:1.2.11.dfsg-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../090-librtmp1_2.4+20151223.gitfa8646d.1-2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libgpg-error0:arm64. Preparing to unpack .../091-libgpg-error0_1.36-7_arm64.deb ... Unpacking libgpg-error0:arm64 (1.36-7) ... Selecting previously unselected package libgcrypt20:arm64. Preparing to unpack .../092-libgcrypt20_1.8.4-5_arm64.deb ... Unpacking libgcrypt20:arm64 (1.8.4-5) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../093-libssh2-1_1.8.0-2.1_arm64.deb ... Unpacking libssh2-1:arm64 (1.8.0-2.1) ... Selecting previously unselected package libcurl3-gnutls:arm64. Preparing to unpack .../094-libcurl3-gnutls_7.65.1-1_arm64.deb ... Unpacking libcurl3-gnutls:arm64 (7.65.1-1) ... Selecting previously unselected package libcurl4-gnutls-dev:arm64. 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Unpacking libitm1:arm64 (9.1.0-10) ... Selecting previously unselected package liblsan0:arm64. Preparing to unpack .../101-liblsan0_9.1.0-10_arm64.deb ... Unpacking liblsan0:arm64 (9.1.0-10) ... Selecting previously unselected package libtsan0:arm64. Preparing to unpack .../102-libtsan0_9.1.0-10_arm64.deb ... Unpacking libtsan0:arm64 (9.1.0-10) ... Selecting previously unselected package libstdc++6:arm64. Preparing to unpack .../103-libstdc++6_9.1.0-10_arm64.deb ... Unpacking libstdc++6:arm64 (9.1.0-10) ... Selecting previously unselected package libubsan1:arm64. Preparing to unpack .../104-libubsan1_9.1.0-10_arm64.deb ... Unpacking libubsan1:arm64 (9.1.0-10) ... Selecting previously unselected package libgcc-8-dev:arm64. Preparing to unpack .../105-libgcc-8-dev_8.3.0-19_arm64.deb ... Unpacking libgcc-8-dev:arm64 (8.3.0-19) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../106-libgfortran5_9.1.0-10_arm64.deb ... Unpacking libgfortran5:arm64 (9.1.0-10) ... Selecting previously unselected package libltdl7:arm64. Preparing to unpack .../107-libltdl7_2.4.6-10_arm64.deb ... Unpacking libltdl7:arm64 (2.4.6-10) ... Selecting previously unselected package libnuma1:arm64. Preparing to unpack .../108-libnuma1_2.0.12-1_arm64.deb ... Unpacking libnuma1:arm64 (2.0.12-1) ... Selecting previously unselected package libhwloc5:arm64. Preparing to unpack .../109-libhwloc5_1.11.12-3_arm64.deb ... Unpacking libhwloc5:arm64 (1.11.12-3) ... Selecting previously unselected package libnuma-dev:arm64. Preparing to unpack .../110-libnuma-dev_2.0.12-1_arm64.deb ... Unpacking libnuma-dev:arm64 (2.0.12-1) ... Selecting previously unselected package libltdl-dev:arm64. Preparing to unpack .../111-libltdl-dev_2.4.6-10_arm64.deb ... Unpacking libltdl-dev:arm64 (2.4.6-10) ... Selecting previously unselected package libhwloc-dev:arm64. Preparing to unpack .../112-libhwloc-dev_1.11.12-3_arm64.deb ... Unpacking libhwloc-dev:arm64 (1.11.12-3) ... Selecting previously unselected package libpciaccess0:arm64. Preparing to unpack .../113-libpciaccess0_0.14-1_arm64.deb ... Unpacking libpciaccess0:arm64 (0.14-1) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../114-libicu63_63.2-2_arm64.deb ... Unpacking libicu63:arm64 (63.2-2) ... Selecting previously unselected package liblzma5:arm64. Preparing to unpack .../115-liblzma5_5.2.4-1_arm64.deb ... Unpacking liblzma5:arm64 (5.2.4-1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../116-libxml2_2.9.4+dfsg1-7+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package ocl-icd-libopencl1:arm64. Preparing to unpack .../117-ocl-icd-libopencl1_2.2.12-2_arm64.deb ... Unpacking ocl-icd-libopencl1:arm64 (2.2.12-2) ... Selecting previously unselected package libhwloc-plugins:arm64. Preparing to unpack .../118-libhwloc-plugins_1.11.12-3_arm64.deb ... Unpacking libhwloc-plugins:arm64 (1.11.12-3) ... Selecting previously unselected package libnl-3-dev:arm64. Preparing to unpack .../119-libnl-3-dev_3.4.0-1_arm64.deb ... Unpacking libnl-3-dev:arm64 (3.4.0-1) ... Selecting previously unselected package libnl-route-3-dev:arm64. Preparing to unpack .../120-libnl-route-3-dev_3.4.0-1_arm64.deb ... Unpacking libnl-route-3-dev:arm64 (3.4.0-1) ... Selecting previously unselected package libibverbs-dev:arm64. Preparing to unpack .../121-libibverbs-dev_24.0-2_arm64.deb ... Unpacking libibverbs-dev:arm64 (24.0-2) ... Selecting previously unselected package libpmix2:arm64. Preparing to unpack .../122-libpmix2_3.1.4~rc1-1_arm64.deb ... Unpacking libpmix2:arm64 (3.1.4~rc1-1) ... Selecting previously unselected package libopenmpi3:arm64. Preparing to unpack .../123-libopenmpi3_3.1.3-11_arm64.deb ... Unpacking libopenmpi3:arm64 (3.1.3-11) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../124-openmpi-common_3.1.3-11_all.deb ... Unpacking openmpi-common (3.1.3-11) ... Selecting previously unselected package openmpi-bin:arm64. Preparing to unpack .../125-openmpi-bin_3.1.3-11_arm64.deb ... Unpacking openmpi-bin:arm64 (3.1.3-11) ... Selecting previously unselected package libopenmpi-dev:arm64. Preparing to unpack .../126-libopenmpi-dev_3.1.3-11_arm64.deb ... Unpacking libopenmpi-dev:arm64 (3.1.3-11) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../127-libsqlite3-0_3.29.0-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.29.0-1) ... Selecting previously unselected package libsqlite3-dev:arm64. Preparing to unpack .../128-libsqlite3-dev_3.29.0-1_arm64.deb ... Unpacking libsqlite3-dev:arm64 (3.29.0-1) ... Selecting previously unselected package libssl-dev:arm64. Preparing to unpack .../129-libssl-dev_1.1.1c-1_arm64.deb ... Unpacking libssl-dev:arm64 (1.1.1c-1) ... Selecting previously unselected package libstdc++-8-dev:arm64. Preparing to unpack .../130-libstdc++-8-dev_8.3.0-19_arm64.deb ... Unpacking libstdc++-8-dev:arm64 (8.3.0-19) ... Selecting previously unselected package mpi-default-dev:arm64. Preparing to unpack .../131-mpi-default-dev_1.13_arm64.deb ... Unpacking mpi-default-dev:arm64 (1.13) ... Selecting previously unselected package sbuild-build-depends-hyphy-dummy:arm64. Preparing to unpack .../132-sbuild-build-depends-hyphy-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-hyphy-dummy:arm64 (0.invalid.0) ... Setting up libexpat1:amd64 (2.2.7-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up lsb-base (10.2019051400) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up libarchive13:amd64 (3.3.3-4) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.60.5-1) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1c-1) ... Setting up libprocps7:amd64 (2:3.3.15-2) ... Setting up libnghttp2-14:amd64 (1.37.0-1) ... Setting up linux-libc-dev:arm64 (4.19.37-6) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libldap-common (2.4.47+dfsg-3) ... Setting up libkrb5support0:amd64 (1.17-5) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Setting up autotools-dev (20180224.1) ... Setting up libuv1:amd64 (1.24.1-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libncurses6:amd64 (6.1+20190713-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:arm64 (8.3.0-19) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libk5crypto3:amd64 (1.17-5) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1) ... Setting up librhash0:amd64 (1.3.8-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up openmpi-common (3.1.3-11) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:amd64 (1.17-5) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up gcc-9-base:arm64 (9.1.0-10) ... Setting up libfile-stripnondeterminism-perl (1.2.3-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up libedit2:amd64 (3.1-20190324-1) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-5) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12.20190716-1) ... Setting up groff-base (1.22.4-3) ... Setting up libcurl4:amd64 (7.65.1-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up openssh-client (1:8.0p1-3) ... Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.13.4-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.28-10) ... Setting up dh-strip-nondeterminism (1.2.3-1) ... Setting up libnuma1:arm64 (2.0.12-1) ... Setting up ocl-icd-libopencl1:arm64 (2.2.12-2) ... Setting up libnl-3-200:arm64 (3.4.0-1) ... Setting up libtasn1-6:arm64 (4.13-4) ... Setting up libc6-dev:arm64 (2.28-10) ... Setting up libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Setting up libitm1:arm64 (9.1.0-10) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up liblzma5:arm64 (5.2.4-1) ... Setting up libgpg-error0:arm64 (1.36-7) ... Setting up libgcc1:arm64 (1:9.1.0-10) ... Setting up libssl1.1:arm64 (1.1.1c-1) ... Setting up libsqlite3-0:arm64 (3.29.0-1) ... Setting up libnghttp2-14:arm64 (1.37.0-1) ... Setting up libunistring2:arm64 (0.9.10-2) ... Setting up libgcrypt20:arm64 (1.8.4-5) ... Setting up debhelper (12.2.3) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-1) ... Setting up libffi6:arm64 (3.2.1-9) ... Setting up libidn2-0:arm64 (2.2.0-1) ... Setting up libcom-err2:arm64 (1.45.2-1) ... Setting up libgomp1:arm64 (9.1.0-10) ... Setting up libkrb5support0:arm64 (1.17-5) ... Setting up libnuma-dev:arm64 (2.0.12-1) ... Setting up libnl-route-3-200:arm64 (3.4.0-1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1) ... Setting up libasan5:arm64 (9.1.0-10) ... Setting up libsqlite3-dev:arm64 (3.29.0-1) ... Setting up libgmp10:arm64 (2:6.1.2+dfsg-4) ... Setting up libp11-kit0:arm64 (0.23.15-2) ... Setting up libssl-dev:arm64 (1.1.1c-1) ... Setting up libatomic1:arm64 (9.1.0-10) ... Setting up libk5crypto3:arm64 (1.17-5) ... Setting up libnettle6:arm64 (3.4.1-1) ... Setting up libltdl7:arm64 (2.4.6-10) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1) ... Setting up libevent-core-2.1-6:arm64 (2.1.8-stable-4) ... Setting up libgfortran5:arm64 (9.1.0-10) ... Setting up libevent-2.1-6:arm64 (2.1.8-stable-4) ... Setting up libnl-3-dev:arm64 (3.4.0-1) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-5) ... Setting up libstdc++6:arm64 (9.1.0-10) ... Setting up liblsan0:arm64 (9.1.0-10) ... Setting up libtsan0:arm64 (9.1.0-10) ... Setting up libevent-pthreads-2.1-6:arm64 (2.1.8-stable-4) ... Setting up libpciaccess0:arm64 (0.14-1) ... Setting up libibverbs1:arm64 (24.0-2) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up ibverbs-providers:arm64 (24.0-2) ... Setting up libhogweed4:arm64 (3.4.1-1) ... Setting up libhwloc5:arm64 (1.11.12-3) ... Setting up libicu63:arm64 (63.2-2) ... Setting up libnl-route-3-dev:arm64 (3.4.0-1) ... Setting up libltdl-dev:arm64 (2.4.6-10) ... Setting up libgnutls30:arm64 (3.6.8-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libgssapi-krb5-2:arm64 (1.17-5) ... Setting up libubsan1:arm64 (9.1.0-10) ... Setting up libhwloc-dev:arm64 (1.11.12-3) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3) ... Setting up libcurl3-gnutls:arm64 (7.65.1-1) ... Setting up libibverbs-dev:arm64 (24.0-2) ... Setting up libcurl4-gnutls-dev:arm64 (7.65.1-1) ... Setting up libhwloc-plugins:arm64 (1.11.12-3) ... Setting up libgcc-8-dev:arm64 (8.3.0-19) ... Setting up libstdc++-8-dev:arm64 (8.3.0-19) ... Setting up libpmix2:arm64 (3.1.4~rc1-1) ... Setting up libopenmpi3:arm64 (3.1.3-11) ... Setting up openmpi-bin:arm64 (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libopenmpi-dev:arm64 (3.1.3-11) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev:arm64 (1.13) ... Setting up sbuild-build-depends-hyphy-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.32.51.20190707-1 dpkg-dev_1.19.7 g++-8_8.3.0-19 gcc-8_8.3.0-19 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-19 libstdc++-8-dev-arm64-cross_8.3.0-19cross1 libstdc++6_9.1.0-10 libstdc++6-arm64-cross_9.1.0-8cross1 linux-libc-dev_4.19.37-6 Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.32.51.20190707-1 binutils-aarch64-linux-gnu_2.32.51.20190707-1 binutils-common_2.32.51.20190707-1 binutils-x86-64-linux-gnu_2.32.51.20190707-1 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9.2 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-19 cpp-8-aarch64-linux-gnu_8.3.0-19cross1 cpp-aarch64-linux-gnu_4:8.3.0-1 cross-config_2.6.15-3 crossbuild-essential-arm64_12.6 dash_0.5.10.2-6 debconf_1.5.72 debhelper_12.2.3 debian-archive-keyring_2019.1 debianutils_4.8.6.3 dh-autoreconf_19 dh-strip-nondeterminism_1.2.3-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.12.20190716-1 e2fsprogs_1.45.2-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.37-3 findutils_4.6.0+git+20190510-2 g++_4:8.3.0-1 g++-8_8.3.0-19 g++-8-aarch64-linux-gnu_8.3.0-19cross1 g++-aarch64-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-19 gcc-8-aarch64-linux-gnu_8.3.0-19cross1 gcc-8-aarch64-linux-gnu-base_8.3.0-19cross1 gcc-8-base_8.3.0-19 gcc-8-cross-base_8.3.0-19cross1 gcc-9-base_9.1.0-10 gcc-9-cross-base_9.1.0-8cross1 gcc-aarch64-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 ibverbs-providers_24.0-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.2 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-4 libasan5_9.1.0-10 libasan5-arm64-cross_9.1.0-8cross1 libatomic1_9.1.0-10 libatomic1-arm64-cross_9.1.0-8cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.5-1 libaudit1_1:2.8.5-1 libbinutils_2.32.51.20190707-1 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9.2 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-arm64-cross_2.28-10cross3 libc6-dev_2.28-10 libc6-dev-arm64-cross_2.28-10cross3 libcap-ng0_0.7.9-2 libcc1-0_9.1.0-10 libcom-err2_1.45.2-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcurl3-gnutls_7.65.1-1 libcurl4_7.65.1-1 libcurl4-gnutls-dev_7.65.1-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libedit2_3.1-20190324-1 libelf1_0.176-1.1 libevent-2.1-6_2.1.8-stable-4 libevent-core-2.1-6_2.1.8-stable-4 libevent-pthreads-2.1-6_2.1.8-stable-4 libexpat1_2.2.7-1 libext2fs2_1.45.2-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.2.3-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-19 libgcc-8-dev-arm64-cross_8.3.0-19cross1 libgcc1_1:9.1.0-10 libgcc1-arm64-cross_1:9.1.0-8cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4+b1 libgdbm6_1.18.1-4+b1 libgfortran5_9.1.0-10 libglib2.0-0_2.60.5-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.8-2 libgomp1_9.1.0-10 libgomp1-arm64-cross_9.1.0-8cross1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-5 libhogweed4_3.4.1-1 libhwloc-dev_1.11.12-3 libhwloc-plugins_1.11.12-3 libhwloc5_1.11.12-3 libibverbs-dev_24.0-2 libibverbs1_24.0-2 libicu63_63.2-2 libidn2-0_2.2.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_9.1.0-10 libitm1-arm64-cross_9.1.0-8cross1 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-5 libkeyutils1_1.6-6 libkrb5-3_1.17-5 libkrb5support0_1.17-5 libldap-2.4-2_2.4.47+dfsg-3 libldap-common_2.4.47+dfsg-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_9.1.0-10 liblsan0-arm64-cross_9.1.0-8cross1 libltdl-dev_2.4.6-10 libltdl7_2.4.6-10 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.37-3 libmagic1_1:5.37-3 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-19 libncurses6_6.1+20190713-1 libncursesw6_6.1+20190713-1 libnettle6_3.4.1-1 libnghttp2-14_1.37.0-1 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnuma-dev_2.0.12-1 libnuma1_2.0.12-1 libopenmpi-dev_3.1.3-11 libopenmpi3_3.1.3-11 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.14-1 libpcre2-8-0_10.32-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpmix2_3.1.4~rc1-1 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libquadmath0_9.1.0-10 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.4.1-2 libselinux1_2.9-2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.29.0-1 libsqlite3-dev_3.29.0-1 libss2_1.45.2-1 libssh2-1_1.8.0-2.1 libssl-dev_1.1.1c-1 libssl1.1_1.1.1c-1 libstdc++-8-dev_8.3.0-19 libstdc++-8-dev-arm64-cross_8.3.0-19cross1 libstdc++6_9.1.0-10 libstdc++6-arm64-cross_9.1.0-8cross1 libsub-override-perl_0.09-2 libsystemd0_241-7 libtasn1-6_4.13-4 libtinfo6_6.1+20190713-1 libtool_2.4.6-10 libtsan0_9.1.0-10 libtsan0-arm64-cross_9.1.0-8cross1 libubsan1_9.1.0-10 libubsan1-arm64-cross_9.1.0-8cross1 libuchardet0_0.0.6-3 libudev1_241-7 libunistring2_0.9.10-2 libuuid1_2.33.1-0.1 libuv1_1.24.1-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.29-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-6 linux-libc-dev-arm64-cross_4.19.37-5cross3 login_1:4.7-2 lsb-base_10.2019051400 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 mpi-default-dev_1.13 ncurses-base_6.1+20190713-1 ncurses-bin_6.1+20190713-1 ocl-icd-libopencl1_2.2.12-2 openmpi-bin_3.1.3-11 openmpi-common_3.1.3-11 openssh-client_1:8.0p1-3 passwd_1:4.7-2 patch_2.7.6-5 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 procps_2:3.3.15-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-hyphy-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.95-2 tar_1.30+dfsg-6 tzdata_2019b-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Jul 8 18:47:36 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./hyphy_2.3.14+dfsg-2.dsc dpkg-source: info: extracting hyphy in /<>/hyphy-2.3.14+dfsg dpkg-source: info: unpacking hyphy_2.3.14+dfsg.orig.tar.xz dpkg-source: info: unpacking hyphy_2.3.14+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_sqlite.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying drop_profiling_option.patch dpkg-source: info: applying remove_unneeded_test.patch dpkg-source: info: applying msse_option_only_if_available.patch dpkg-source: info: applying remove_arch_specific_flags.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-a17ad644-b1f8-426f-bb43-6625803c5892 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package hyphy dpkg-buildpackage: info: source version 2.3.14+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Saira Hussain dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --buildsystem=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/hyphy-2.3.14+dfsg' dh_auto_clean make[1]: Leaving directory '/<>/hyphy-2.3.14+dfsg' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build-arch dh build-arch --buildsystem=cmake dh_update_autotools_config -a -O--buildsystem=cmake dh_autoreconf -a -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/hyphy-2.3.14+dfsg' dh_auto_configure -- -DINSTALL_PREFIX=/usr cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DINSTALL_PREFIX=/usr .. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_AVX_EXTENSIONS -- Performing Test HAVE_AVX_EXTENSIONS - Failed -- Performing Test HAVE_SSE3_EXTENSIONS -- Performing Test HAVE_SSE3_EXTENSIONS - Failed Set compiler flags to -fsigned-char -O3 -- Looking for amd_log in libamdlibm.so -- Looking for amd_log in libamdlibm.so - not found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found CURL: /usr/lib/aarch64-linux-gnu/libcurl.so (found version "7.65.1") -- Found PkgConfig: /usr/bin/aarch64-linux-gnu-pkg-config (found version "") -- Checking for module 'sqlite3' -- -- Found SQLITE3: /usr/lib/aarch64-linux-gnu/libsqlite3.so -- Could NOT find PythonInterp (missing: PYTHON_EXECUTABLE) -- Looking for pthread.h -- Looking for pthread.h - not found -- Could NOT find Threads (missing: Threads_FOUND) -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - not found -- Looking for CL_VERSION_2_1 -- Looking for CL_VERSION_2_1 - not found -- Looking for CL_VERSION_2_0 -- Looking for CL_VERSION_2_0 - not found -- Looking for CL_VERSION_1_2 -- Looking for CL_VERSION_1_2 - not found -- Looking for CL_VERSION_1_1 -- Looking for CL_VERSION_1_1 - not found -- Looking for CL_VERSION_1_0 -- Looking for CL_VERSION_1_0 - not found -- Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR) -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR INSTALL_PREFIX PKGCONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu make[1]: Leaving directory '/<>/hyphy-2.3.14+dfsg' debian/rules override_dh_auto_build make[1]: Entering directory '/<>/hyphy-2.3.14+dfsg' # no idea about the purpose of the dynamic library - executables are not simply linked against it dh_auto_build -- MP MPI GTEST # LIB cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true" MP MPI GTEST make[2]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<>/hyphy-2.3.14+dfsg -B/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 MP make[3]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<>/hyphy-2.3.14+dfsg -B/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu/CMakeFiles 32 make -f CMakeFiles/Makefile2 CMakeFiles/MP.dir/all make[4]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/HYPHYMP.dir/build.make CMakeFiles/HYPHYMP.dir/depend make[5]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' cd /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/hyphy-2.3.14+dfsg /<>/hyphy-2.3.14+dfsg /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu/CMakeFiles/HYPHYMP.dir/DependInfo.cmake --color= Scanning dependencies of target HYPHYMP make[5]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/HYPHYMP.dir/build.make CMakeFiles/HYPHYMP.dir/build make[5]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' [ 3%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/_hyExecutionContext.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/_hyExecutionContext.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/_hyExecutionContext.cpp [ 6%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/alignment.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/alignment.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/alignment.cpp [ 6%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/avllist.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/avllist.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/avllist.cpp [ 9%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/avllistx.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/avllistx.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/avllistx.cpp [ 9%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/avllistxl.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/avllistxl.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/avllistxl.cpp [ 12%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/avllistxl_iterator.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/avllistxl_iterator.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/avllistxl_iterator.cpp [ 15%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/baseobj.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/batchlanhelpers.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/batchlanhelpers.cpp [ 21%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/batchlanruntime.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 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CMakeFiles/HYPHYMP.dir/src/core/calcnode.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/calcnode.cpp [ 25%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/calcnode2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -fstrict-aliasing -funroll-loops -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/calcnode2.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/calcnode2.cpp [ 28%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/category.cpp.o /usr/bin/aarch64-linux-gnu-g++ 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-I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/constant.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/constant.cpp [ 31%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/error.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security 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CMakeFiles/HYPHYMP.dir/src/core/formula.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/formula.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/formula.cpp [ 37%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/fstring.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/fstring.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/fstring.cpp [ 40%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/global_object_lists.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/global_object_lists.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/global_object_lists.cpp [ 40%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/hbl_env.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/hbl_env.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/hbl_env.cpp [ 43%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/likefunc.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/likefunc.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/likefunc.cpp [ 46%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/likefunc2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/likefunc2.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/likefunc2.cpp [ 46%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/likefuncocl.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/likefuncocl.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/likefuncocl.cpp [ 50%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/list.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/list.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/list.cpp [ 50%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/mathobj.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/mathobj.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/mathobj.cpp [ 53%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/matrix.cpp.o 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-I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/nexus.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/nexus.cpp [ 56%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/operation.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong 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object CMakeFiles/HYPHYMP.dir/src/core/parser2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/parser2.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/parser2.cpp [ 62%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/polynoml.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/polynoml.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/polynoml.cpp [ 65%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/regex.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/regex.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/regex.cpp [ 65%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/sequence.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/sequence.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/sequence.cpp [ 68%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/simplelist.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/simplelist.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/simplelist.cpp [ 71%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/site.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/site.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/site.cpp [ 71%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/stack.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/stack.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/stack.cpp [ 75%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/string_file_wrapper.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/string_file_wrapper.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/string_file_wrapper.cpp [ 78%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/strings.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/strings.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/strings.cpp [ 78%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/time_difference.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/time_difference.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/time_difference.cpp [ 81%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/trie.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/trie.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/trie.cpp [ 81%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/variable.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/variable.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/variable.cpp [ 84%] Building CXX object CMakeFiles/HYPHYMP.dir/src/core/variablecontainer.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -w -Wno-int-to-pointer-cast -o CMakeFiles/HYPHYMP.dir/src/core/variablecontainer.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/core/variablecontainer.cpp [ 87%] Building CXX object CMakeFiles/HYPHYMP.dir/src/new/bayesgraph.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/new/bayesgraph.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/new/bayesgraph.cpp [ 87%] Building CXX object CMakeFiles/HYPHYMP.dir/src/new/bayesgraph2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/new/bayesgraph2.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/new/bayesgraph2.cpp [ 90%] Building CXX object CMakeFiles/HYPHYMP.dir/src/new/bgm.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/new/bgm.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/new/bgm.cpp [ 93%] Building CXX object CMakeFiles/HYPHYMP.dir/src/new/bgm2.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/new/bgm2.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/new/bgm2.cpp [ 93%] Building CXX object CMakeFiles/HYPHYMP.dir/src/new/scfg.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/new/scfg.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/new/scfg.cpp [ 96%] Building CXX object CMakeFiles/HYPHYMP.dir/src/utils/hyphyunixutils.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/utils/hyphyunixutils.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/utils/hyphyunixutils.cpp [ 96%] Building CXX object CMakeFiles/HYPHYMP.dir/src/mains/unix.cpp.o /usr/bin/aarch64-linux-gnu-g++ -D_HYPHY_LIBDIRECTORY_=\"/usr/lib/hyphy\" -D_SLKP_LFENGINE_REWRITE_ -D__AFYP_REWRITE_BGM__ -D__HYPHYCURL__ -D__HYPHY_64__ -D__MP2__ -D__MP__ -D__UNIX__ -I/<>/hyphy-2.3.14+dfsg/src/core/include -I/<>/hyphy-2.3.14+dfsg/src/lib/Link -I/<>/hyphy-2.3.14+dfsg/src/new/include -I/<>/hyphy-2.3.14+dfsg/contrib/gtest-1.7.0/include -I/<>/hyphy-2.3.14+dfsg/tests/gtests -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fsigned-char -O3 -w -fopenmp -o CMakeFiles/HYPHYMP.dir/src/mains/unix.cpp.o -c /<>/hyphy-2.3.14+dfsg/src/mains/unix.cpp [100%] Linking CXX executable HYPHYMP /usr/bin/cmake -E cmake_link_script CMakeFiles/HYPHYMP.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>/hyphy-2.3.14+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic -fsigned-char -O3 -fopenmp CMakeFiles/HYPHYMP.dir/src/core/_hyExecutionContext.cpp.o CMakeFiles/HYPHYMP.dir/src/core/alignment.cpp.o CMakeFiles/HYPHYMP.dir/src/core/avllist.cpp.o CMakeFiles/HYPHYMP.dir/src/core/avllistx.cpp.o CMakeFiles/HYPHYMP.dir/src/core/avllistxl.cpp.o CMakeFiles/HYPHYMP.dir/src/core/avllistxl_iterator.cpp.o CMakeFiles/HYPHYMP.dir/src/core/baseobj.cpp.o CMakeFiles/HYPHYMP.dir/src/core/batchlan.cpp.o CMakeFiles/HYPHYMP.dir/src/core/batchlan2.cpp.o CMakeFiles/HYPHYMP.dir/src/core/batchlanhelpers.cpp.o CMakeFiles/HYPHYMP.dir/src/core/batchlanruntime.cpp.o CMakeFiles/HYPHYMP.dir/src/core/calcnode.cpp.o CMakeFiles/HYPHYMP.dir/src/core/calcnode2.cpp.o CMakeFiles/HYPHYMP.dir/src/core/category.cpp.o CMakeFiles/HYPHYMP.dir/src/core/constant.cpp.o CMakeFiles/HYPHYMP.dir/src/core/error.cpp.o CMakeFiles/HYPHYMP.dir/src/core/fisher_exact.cpp.o CMakeFiles/HYPHYMP.dir/src/core/formula.cpp.o CMakeFiles/HYPHYMP.dir/src/core/fstring.cpp.o CMakeFiles/HYPHYMP.dir/src/core/global_object_lists.cpp.o CMakeFiles/HYPHYMP.dir/src/core/hbl_env.cpp.o CMakeFiles/HYPHYMP.dir/src/core/likefunc.cpp.o CMakeFiles/HYPHYMP.dir/src/core/likefunc2.cpp.o CMakeFiles/HYPHYMP.dir/src/core/likefuncocl.cpp.o CMakeFiles/HYPHYMP.dir/src/core/list.cpp.o CMakeFiles/HYPHYMP.dir/src/core/mathobj.cpp.o CMakeFiles/HYPHYMP.dir/src/core/matrix.cpp.o CMakeFiles/HYPHYMP.dir/src/core/nexus.cpp.o CMakeFiles/HYPHYMP.dir/src/core/operation.cpp.o CMakeFiles/HYPHYMP.dir/src/core/parser.cpp.o CMakeFiles/HYPHYMP.dir/src/core/parser2.cpp.o CMakeFiles/HYPHYMP.dir/src/core/polynoml.cpp.o CMakeFiles/HYPHYMP.dir/src/core/regex.cpp.o CMakeFiles/HYPHYMP.dir/src/core/sequence.cpp.o CMakeFiles/HYPHYMP.dir/src/core/simplelist.cpp.o CMakeFiles/HYPHYMP.dir/src/core/site.cpp.o CMakeFiles/HYPHYMP.dir/src/core/stack.cpp.o CMakeFiles/HYPHYMP.dir/src/core/string_file_wrapper.cpp.o CMakeFiles/HYPHYMP.dir/src/core/strings.cpp.o CMakeFiles/HYPHYMP.dir/src/core/time_difference.cpp.o CMakeFiles/HYPHYMP.dir/src/core/trie.cpp.o CMakeFiles/HYPHYMP.dir/src/core/variable.cpp.o CMakeFiles/HYPHYMP.dir/src/core/variablecontainer.cpp.o CMakeFiles/HYPHYMP.dir/src/new/bayesgraph.cpp.o CMakeFiles/HYPHYMP.dir/src/new/bayesgraph2.cpp.o CMakeFiles/HYPHYMP.dir/src/new/bgm.cpp.o CMakeFiles/HYPHYMP.dir/src/new/bgm2.cpp.o CMakeFiles/HYPHYMP.dir/src/new/scfg.cpp.o CMakeFiles/HYPHYMP.dir/src/utils/hyphyunixutils.cpp.o CMakeFiles/HYPHYMP.dir/src/mains/unix.cpp.o -o HYPHYMP -ldl -lpthread -lcrypto -lcurl -lssl -lsqlite3 make[5]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' [100%] Built target HYPHYMP make -f CMakeFiles/MP.dir/build.make CMakeFiles/MP.dir/depend make[5]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' cd /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/hyphy-2.3.14+dfsg /<>/hyphy-2.3.14+dfsg /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu/CMakeFiles/MP.dir/DependInfo.cmake --color= Scanning dependencies of target MP make[5]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/MP.dir/build.make CMakeFiles/MP.dir/build make[5]: Entering directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' make[5]: Nothing to be done for 'CMakeFiles/MP.dir/build'. make[5]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' [100%] Built target MP make[4]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' make[2]: *** No rule to make target 'MPI'. Stop. make[2]: Leaving directory '/<>/hyphy-2.3.14+dfsg/obj-aarch64-linux-gnu' dh_auto_build: cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true" MP MPI GTEST returned exit code 2 make[1]: *** [debian/rules:24: override_dh_auto_build] Error 255 make[1]: Leaving directory '/<>/hyphy-2.3.14+dfsg' make: *** [debian/rules:14: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2019-07-22T07:48:59Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 66044 Build-Time: 102 Distribution: unstable Fail-Stage: build Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 34 Job: hyphy_2.3.14+dfsg-2 Machine Architecture: amd64 Package: hyphy Package-Time: 147 Source-Version: 2.3.14+dfsg-2 Space: 66044 Status: attempted Version: 2.3.14+dfsg-2 -------------------------------------------------------------------------------- Finished at 2019-07-22T07:48:59Z Build needed 00:02:27, 66044k disk space