sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | idba 1.1.3-7 (armel) Mon, 11 May 2020 12:19:25 +0000 | +==============================================================================+ Package: idba Version: 1.1.3-7 Source Version: 1.1.3-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-1ea6385c-b63b-4c1b-9c4f-2e1866ef24e7' with '<>' I: NOTICE: Log filtering will replace 'build/idba-gR6NEd/resolver-n3xvYS' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-11-0800.18.pdiff [6103 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-11-0800.18.pdiff [6103 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-11-0800.18.pdiff [3340 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-11-0800.18.pdiff [3340 B] Get:6 http://debian.oregonstate.edu/debian unstable/main armel Packages [7893 kB] Fetched 8104 kB in 2s (5172 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'idba' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/idba.git Please use: git clone https://salsa.debian.org/med-team/idba.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 711 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main idba 1.1.3-7 (dsc) [2022 B] Get:2 http://debian.oregonstate.edu/debian unstable/main idba 1.1.3-7 (tar) [446 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main idba 1.1.3-7 (diff) [263 kB] Fetched 711 kB in 0s (13.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/idba-gR6NEd/idba-1.1.3' with '<>' I: NOTICE: Log filtering will replace 'build/idba-gR6NEd' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [425 B] Get:5 copy:/<>/apt_archive ./ Packages [493 B] Fetched 1875 B in 0s (79.2 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils build-essential cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-base:armel gcc-10-cross-base gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbsd0 libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel glibc-doc manpages-dev:armel libstdc++-9-doc libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdmainutils build-essential cpp-9-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-base:armel gcc-10-cross-base gcc-9-arm-linux-gnueabi gcc-9-arm-linux-gnueabi-base gcc-9-base:armel gcc-9-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libasan5-armel-cross libatomic1:armel libatomic1-armel-cross libbsd0 libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:armel libgcc-9-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libglib2.0-0 libgomp1:armel libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libstdc++-9-dev libstdc++-9-dev:armel libstdc++-9-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 77.5 MB of archives. After this operation, 313 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main armel gcc-10-base armel 10.1.0-1 [197 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.3.0-12 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.34-6 [2749 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-7 [2634 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-12 [1701 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-12 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi-base amd64 9.3.0-8cross1 [197 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-arm-linux-gnueabi amd64 9.3.0-8cross1 [6816 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:9.2.1-3.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-8cross1 [192 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10-20200418-1cross1 [192 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.30-2cross1 [1128 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armel-cross all 10-20200418-1cross1 [38.3 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 10-20200418-1cross1 [84.1 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 10-20200418-1cross1 [8812 B] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 9.3.0-8cross1 [340 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 10-20200418-1cross1 [368 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 10-20200418-1cross1 [114 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-armel-cross all 9.3.0-8cross1 [644 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-arm-linux-gnueabi amd64 9.3.0-8cross1 [7174 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1464 B] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.4.19-1cross1 [1155 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.30-2cross1 [2148 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-armel-cross all 9.3.0-8cross1 [1712 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-arm-linux-gnueabi amd64 9.3.0-8cross1 [7401 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:9.2.1-3.1 [1180 B] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5 [709 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13 [184 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.0-1 [24.2 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.0-1 [14.8 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.2-1 [1343 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13 [1002 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main armel libgcc-s1 armel 10.1.0-1 [38.2 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main armel libcrypt1 armel 1:4.4.16-1 [101 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.30-7 [2349 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.3.0-12 [347 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 10.1.0-1 [9012 B] Get:87 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.6.7-1 [1080 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main armel libcrypt-dev armel 1:4.4.16-1 [120 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.30-7 [2189 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 10.1.0-1 [86.5 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 10.1.0-1 [408 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 10.1.0-1 [115 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.3.0-12 [646 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.3.0-12 [1744 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 77.5 MB in 1s (117 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12640 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../06-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:armel. Preparing to unpack .../07-gcc-10-base_10.1.0-1_armel.deb ... Unpacking gcc-10-base:armel (10.1.0-1) ... Selecting previously unselected package gcc-9-base:armel. Preparing to unpack .../08-gcc-9-base_9.3.0-12_armel.deb ... Unpacking gcc-9-base:armel (9.3.0-12) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../09-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../10-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../11-libmagic1_1%3a5.38-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../12-file_1%3a5.38-4_amd64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../13-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../14-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../15-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../16-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../17-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../18-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../19-automake_1%3a1.16.2-1_all.deb ... Unpacking automake (1:1.16.2-1) ... Selecting previously unselected package autopoint. Preparing to unpack .../20-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-arm-linux-gnueabi. Preparing to unpack .../21-binutils-arm-linux-gnueabi_2.34-6_amd64.deb ... Unpacking binutils-arm-linux-gnueabi (2.34-6) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../22-libcrypt-dev_1%3a4.4.16-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.16-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../23-libc6-dev_2.30-7_amd64.deb ... Unpacking libc6-dev:amd64 (2.30-7) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../24-libstdc++-9-dev_9.3.0-12_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-12) ... Selecting previously unselected package g++-9. Preparing to unpack .../25-g++-9_9.3.0-12_amd64.deb ... Unpacking g++-9 (9.3.0-12) ... Selecting previously unselected package g++. Preparing to unpack .../26-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package build-essential. Preparing to unpack .../27-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-arm-linux-gnueabi-base:amd64. Preparing to unpack .../28-gcc-9-arm-linux-gnueabi-base_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-arm-linux-gnueabi-base:amd64 (9.3.0-8cross1) ... Selecting previously unselected package cpp-9-arm-linux-gnueabi. Preparing to unpack .../29-cpp-9-arm-linux-gnueabi_9.3.0-8cross1_amd64.deb ... Unpacking cpp-9-arm-linux-gnueabi (9.3.0-8cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabi. Preparing to unpack .../30-cpp-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking cpp-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../31-cross-config_2.6.15-3_all.deb ... Unpacking cross-config (2.6.15-3) ... Selecting previously unselected package gcc-9-cross-base. Preparing to unpack .../32-gcc-9-cross-base_9.3.0-8cross1_all.deb ... Unpacking gcc-9-cross-base (9.3.0-8cross1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../33-gcc-10-cross-base_10-20200418-1cross1_all.deb ... Unpacking gcc-10-cross-base (10-20200418-1cross1) ... Selecting previously unselected package libc6-armel-cross. Preparing to unpack .../34-libc6-armel-cross_2.30-2cross1_all.deb ... Unpacking libc6-armel-cross (2.30-2cross1) ... Selecting previously unselected package libgcc-s1-armel-cross. Preparing to unpack .../35-libgcc-s1-armel-cross_10-20200418-1cross1_all.deb ... Unpacking libgcc-s1-armel-cross (10-20200418-1cross1) ... Selecting previously unselected package libgomp1-armel-cross. Preparing to unpack .../36-libgomp1-armel-cross_10-20200418-1cross1_all.deb ... Unpacking libgomp1-armel-cross (10-20200418-1cross1) ... Selecting previously unselected package libatomic1-armel-cross. Preparing to unpack .../37-libatomic1-armel-cross_10-20200418-1cross1_all.deb ... Unpacking libatomic1-armel-cross (10-20200418-1cross1) ... Selecting previously unselected package libasan5-armel-cross. Preparing to unpack .../38-libasan5-armel-cross_9.3.0-8cross1_all.deb ... Unpacking libasan5-armel-cross (9.3.0-8cross1) ... Selecting previously unselected package libstdc++6-armel-cross. Preparing to unpack .../39-libstdc++6-armel-cross_10-20200418-1cross1_all.deb ... Unpacking libstdc++6-armel-cross (10-20200418-1cross1) ... Selecting previously unselected package libubsan1-armel-cross. Preparing to unpack .../40-libubsan1-armel-cross_10-20200418-1cross1_all.deb ... Unpacking libubsan1-armel-cross (10-20200418-1cross1) ... Selecting previously unselected package libgcc-9-dev-armel-cross. Preparing to unpack .../41-libgcc-9-dev-armel-cross_9.3.0-8cross1_all.deb ... Unpacking libgcc-9-dev-armel-cross (9.3.0-8cross1) ... Selecting previously unselected package gcc-9-arm-linux-gnueabi. Preparing to unpack .../42-gcc-9-arm-linux-gnueabi_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-arm-linux-gnueabi (9.3.0-8cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabi. Preparing to unpack .../43-gcc-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking gcc-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package linux-libc-dev-armel-cross. Preparing to unpack .../44-linux-libc-dev-armel-cross_5.4.19-1cross1_all.deb ... Unpacking linux-libc-dev-armel-cross (5.4.19-1cross1) ... Selecting previously unselected package libc6-dev-armel-cross. Preparing to unpack .../45-libc6-dev-armel-cross_2.30-2cross1_all.deb ... Unpacking libc6-dev-armel-cross (2.30-2cross1) ... Selecting previously unselected package libstdc++-9-dev-armel-cross. Preparing to unpack .../46-libstdc++-9-dev-armel-cross_9.3.0-8cross1_all.deb ... Unpacking libstdc++-9-dev-armel-cross (9.3.0-8cross1) ... Selecting previously unselected package g++-9-arm-linux-gnueabi. Preparing to unpack .../47-g++-9-arm-linux-gnueabi_9.3.0-8cross1_amd64.deb ... Unpacking g++-9-arm-linux-gnueabi (9.3.0-8cross1) ... Selecting previously unselected package g++-arm-linux-gnueabi. Preparing to unpack .../48-g++-arm-linux-gnueabi_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++-arm-linux-gnueabi (4:9.2.1-3.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../49-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../50-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../51-libicu63_63.2-3_amd64.deb ... Unpacking libicu63:amd64 (63.2-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../52-libxml2_2.9.10+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../53-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../54-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../55-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../56-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../57-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../58-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../59-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../60-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../61-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../62-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../63-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-armel. Preparing to unpack .../64-crossbuild-essential-armel_12.8_all.deb ... Unpacking crossbuild-essential-armel (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../65-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../66-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../67-libdebhelper-perl_13_all.deb ... Unpacking libdebhelper-perl (13) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../68-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../69-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../70-libfile-stripnondeterminism-perl_1.8.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.8.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../71-dh-strip-nondeterminism_1.8.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.8.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../72-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../73-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../74-libglib2.0-0_2.64.2-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.64.2-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../75-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../76-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../77-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../78-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../79-debhelper_13_all.deb ... Unpacking debhelper (13) ... Selecting previously unselected package libgcc-s1:armel. Preparing to unpack .../80-libgcc-s1_10.1.0-1_armel.deb ... Unpacking libgcc-s1:armel (10.1.0-1) ... Selecting previously unselected package libcrypt1:armel. Preparing to unpack .../81-libcrypt1_1%3a4.4.16-1_armel.deb ... Unpacking libcrypt1:armel (1:4.4.16-1) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../82-libc6_2.30-7_armel.deb ... Unpacking libc6:armel (2.30-7) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../83-libasan5_9.3.0-12_armel.deb ... Unpacking libasan5:armel (9.3.0-12) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../84-libatomic1_10.1.0-1_armel.deb ... Unpacking libatomic1:armel (10.1.0-1) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../85-linux-libc-dev_5.6.7-1_armel.deb ... Unpacking linux-libc-dev:armel (5.6.7-1) ... Selecting previously unselected package libcrypt-dev:armel. Preparing to unpack .../86-libcrypt-dev_1%3a4.4.16-1_armel.deb ... Unpacking libcrypt-dev:armel (1:4.4.16-1) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../87-libc6-dev_2.30-7_armel.deb ... Unpacking libc6-dev:armel (2.30-7) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../88-libgomp1_10.1.0-1_armel.deb ... Unpacking libgomp1:armel (10.1.0-1) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../89-libstdc++6_10.1.0-1_armel.deb ... Unpacking libstdc++6:armel (10.1.0-1) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../90-libubsan1_10.1.0-1_armel.deb ... Unpacking libubsan1:armel (10.1.0-1) ... Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../91-libgcc-9-dev_9.3.0-12_armel.deb ... Unpacking libgcc-9-dev:armel (9.3.0-12) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../92-libstdc++-9-dev_9.3.0-12_armel.deb ... Unpacking libstdc++-9-dev:armel (9.3.0-12) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../93-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up binutils-arm-linux-gnueabi (2.34-6) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.64.2-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:armel (5.6.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up libyaml-perl (1.30-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up linux-libc-dev-armel-cross (5.4.19-1cross1) ... Setting up gcc-9-arm-linux-gnueabi-base:amd64 (9.3.0-8cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:armel (10.1.0-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up cpp-9-arm-linux-gnueabi (9.3.0-8cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-8cross1) ... Setting up gcc-10-cross-base (10-20200418-1cross1) ... Setting up libc6-armel-cross (2.30-2cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-7) ... Setting up libc6-dev-armel-cross (2.30-2cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:armel (9.3.0-12) ... Setting up libfile-stripnondeterminism-perl (1.8.0-1) ... Setting up libgomp1-armel-cross (10-20200418-1cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-12) ... Setting up libtool (2.4.6-14) ... Setting up libgcc-s1-armel-cross (10-20200418-1cross1) ... Setting up m4 (1.4.18-4) ... Setting up libstdc++6-armel-cross (10-20200418-1cross1) ... Setting up libatomic1-armel-cross (10-20200418-1cross1) ... Setting up libasan5-armel-cross (9.3.0-8cross1) ... Setting up cpp-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libubsan1-armel-cross (10-20200418-1cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-12) ... Setting up libgcc-9-dev-armel-cross (9.3.0-8cross1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libstdc++-9-dev-armel-cross (9.3.0-8cross1) ... Setting up gcc-9-arm-linux-gnueabi (9.3.0-8cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-arm-linux-gnueabi (9.3.0-8cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up po-debconf (1.0.21) ... Setting up g++-arm-linux-gnueabi (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-armel (12.8) ... Setting up libcrypt1:armel (1:4.4.16-1) ... Setting up libgcc-s1:armel (10.1.0-1) ... Setting up libc6:armel (2.30-7) ... Setting up libcrypt-dev:armel (1:4.4.16-1) ... Setting up libc6-dev:armel (2.30-7) ... Setting up libstdc++6:armel (10.1.0-1) ... Setting up libgomp1:armel (10.1.0-1) ... Setting up dh-autoreconf (19) ... Setting up libasan5:armel (9.3.0-12) ... Setting up libatomic1:armel (10.1.0-1) ... Setting up libubsan1:armel (10.1.0-1) ... Setting up debhelper (13) ... Setting up libgcc-9-dev:armel (9.3.0-12) ... Setting up libstdc++-9-dev:armel (9.3.0-12) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.30-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-6 dpkg-dev_1.19.7 g++-9_9.3.0-12 gcc-9_9.3.0-12 libc6-dev_2.30-7 libstdc++-9-dev_9.3.0-12 libstdc++-9-dev-armel-cross_9.3.0-8cross1 libstdc++6_10.1.0-1 libstdc++6-armel-cross_10-20200418-1cross1 linux-libc-dev_5.6.7-1 Package versions: adduser_3.118 apt_2.1.1 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-6 binutils-arm-linux-gnueabi_2.34-6 binutils-common_2.34-6 binutils-x86-64-linux-gnu_2.34-6 bsdmainutils_11.1.2+b1 bsdutils_1:2.35.1-3 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-3 cpp-9_9.3.0-12 cpp-9-arm-linux-gnueabi_9.3.0-8cross1 cpp-arm-linux-gnueabi_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-armel_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-3 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-12 g++-9-arm-linux-gnueabi_9.3.0-8cross1 g++-arm-linux-gnueabi_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-1 gcc-10-cross-base_10-20200418-1cross1 gcc-8-base_8.4.0-3 gcc-9_9.3.0-12 gcc-9-arm-linux-gnueabi_9.3.0-8cross1 gcc-9-arm-linux-gnueabi-base_9.3.0-8cross1 gcc-9-base_9.3.0-12 gcc-9-cross-base_9.3.0-8cross1 gcc-arm-linux-gnueabi_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.1 libarchive-zip-perl_1.68-1 libasan5_9.3.0-12 libasan5-armel-cross_9.3.0-8cross1 libatomic1_10.1.0-1 libatomic1-armel-cross_10-20200418-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-6 libblkid1_2.35.1-3 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-7 libc-dev-bin_2.30-7 libc6_2.30-7 libc6-armel-cross_2.30-2cross1 libc6-dev_2.30-7 libc6-dev-armel-cross_2.30-2cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10.1.0-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-6 libctf0_2.34-6 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-3 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.0-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-12 libgcc-9-dev-armel-cross_9.3.0-8cross1 libgcc-s1_10.1.0-1 libgcc-s1-armel-cross_10-20200418-1cross1 libgcc1_1:10.1.0-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-1 libgomp1-armel-cross_10-20200418-1cross1 libgpg-error0_1.37-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.1.0-1 liblocale-gettext-perl_1.07-4 liblsan0_10.1.0-1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.35.1-3 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-3 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libquadmath0_10.1.0-1 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.1-3 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-12 libstdc++-9-dev-armel-cross_9.3.0-8cross1 libstdc++6_10.1.0-1 libstdc++6-armel-cross_10-20200418-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.5-2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-1 libubsan1_10.1.0-1 libubsan1-armel-cross_10-20200418-1cross1 libuchardet0_0.0.6-3 libudev1_245.5-2 libunistring2_0.9.10-2 libuuid1_2.35.1-3 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.6.7-1 linux-libc-dev-armel-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-2+b1 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.35.1-3 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-10 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0038+nmu1 util-linux_2.35.1-3 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: idba Binary: idba, idba-extra Architecture: any Version: 1.1.3-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/loneknightpy/idba Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/idba Vcs-Git: https://salsa.debian.org/med-team/idba.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), libgtest-dev , python3 Package-List: idba deb science optional arch=any idba-extra deb science optional arch=any Checksums-Sha1: cf673154a9696215648177f0bc43b9cc25feaf26 446227 idba_1.1.3.orig.tar.gz 359f30b05dc8923891739df705e636c461ad3e89 263052 idba_1.1.3-7.debian.tar.xz Checksums-Sha256: 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0 446227 idba_1.1.3.orig.tar.gz 540627574366ca2cbb36bed35fcc988d74418d95aae1b23676ecd73e6d632c84 263052 idba_1.1.3-7.debian.tar.xz Files: 41fe7eabdcfaea677558f3e4baeb2ea8 446227 idba_1.1.3.orig.tar.gz 2be67984af689e298100b910d25d62c1 263052 idba_1.1.3-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6angURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH+8g/8CQd9AFe9DX5WDeO5yieSGbai6F93dklW +tuwFC39afb11CbQS3VKFu6dDMS9vw4y2XpJq2qzFdR53rFisR7cH6nEbHF+c6fH utpqlpnsX2puEMenzlht34VPmj3jVyHOVQFtYc7Clou3Owoz8iGoslBijhensqZM +1r+uLQ/5GEMDHDAGxC8mIx7CebEVz6h9i8sbtvCsp6jJWkeFPQOFnA4dpI38x0R U84UL+Y1oP2m0gbS0BnguW9zT/EwoCqrpZuXwt2KKiQb72hSPAVeCwYhv/SXG2PI mB4LHEojeKaz5KtIwrMPre/DwbeLPhti5adT9bfoE2xIhw+UHgAIgO0S1VHZ4Nad nvJDyrL6s4s56bX9x4GvVb4hFS+m8HQAw8xEY0OvUwaQrfooXLkovG4YsYfawF97 QpuoCZZoW7lfh5Z+nD75aI1t9jAKawa/QPkIAp6M053DLR9l87XSzD3zzB+R0EfZ 4Bt+gl0M6hpPgcDQR57mU8IxQ3+rtOE/MlLaI6zEsyNhG6VZVyfgFbLlP5/InNDV sCKC8iaiI0qiCzZCe1n0kuNkXtXGkQa3qpd2eDb+RdNdncjTl/jn8NIx/mxsaqMQ vlnApAJdHAK95kjg4G/2Az8e5WsXhU+0RJzPVIhglc/PWA/BeFUijfVyP9YE9QiU LHcQuuxYruA= =ky3L -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sat Apr 18 06:28:21 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./idba_1.1.3-7.dsc dpkg-source: info: extracting idba in /<> dpkg-source: info: unpacking idba_1.1.3.orig.tar.gz dpkg-source: info: unpacking idba_1.1.3-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install_all_idba_flavours.patch dpkg-source: info: applying use-atomic-for-mips.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_debian_packaged_googletest.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-1ea6385c-b63b-4c1b-9c4f-2e1866ef24e7 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package idba dpkg-buildpackage: info: source version 1.1.3-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:8: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation bin/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') bin/Makefile.am:9: warning: source file '$(top_srcdir)/src/tools/fa2fq.cpp' is in a subdirectory, bin/Makefile.am:9: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. bin/Makefile.am:19: warning: source file '$(top_srcdir)/src/tools/filter_blat.cpp' is in a subdirectory, bin/Makefile.am:19: but option 'subdir-objects' is disabled bin/Makefile.am:17: warning: source file '$(top_srcdir)/src/tools/filter_contigs.cpp' is in a subdirectory, bin/Makefile.am:17: but option 'subdir-objects' is disabled bin/Makefile.am:33: warning: source file '$(top_srcdir)/src/release/filterfa.cpp' is in a subdirectory, bin/Makefile.am:33: but option 'subdir-objects' is disabled bin/Makefile.am:25: warning: source file '$(top_srcdir)/src/release/fq2fa.cpp' is in a subdirectory, bin/Makefile.am:25: but option 'subdir-objects' is disabled bin/Makefile.am:34: warning: source file '$(top_srcdir)/src/release/idba.cpp' is in a subdirectory, bin/Makefile.am:34: but option 'subdir-objects' is disabled bin/Makefile.am:30: warning: source file '$(top_srcdir)/src/release/idba_hybrid.cpp' is in a subdirectory, bin/Makefile.am:30: but option 'subdir-objects' is disabled bin/Makefile.am:29: warning: source file '$(top_srcdir)/src/release/idba_tran.cpp' is in a subdirectory, bin/Makefile.am:29: but option 'subdir-objects' is disabled bin/Makefile.am:13: warning: source file '$(top_srcdir)/src/tools/idba_tran_test.cpp' is in a subdirectory, bin/Makefile.am:13: but option 'subdir-objects' is disabled bin/Makefile.am:27: warning: source file '$(top_srcdir)/src/release/idba_ud.cpp' is in a subdirectory, bin/Makefile.am:27: but option 'subdir-objects' is disabled bin/Makefile.am:31: warning: source file '$(top_srcdir)/src/release/parallel_blat.cpp' is in a subdirectory, bin/Makefile.am:31: but option 'subdir-objects' is disabled bin/Makefile.am:18: warning: source file '$(top_srcdir)/src/tools/parallel_rna_blat.cpp' is in a subdirectory, bin/Makefile.am:18: but option 'subdir-objects' is disabled bin/Makefile.am:12: warning: source file '$(top_srcdir)/src/tools/print_graph.cpp' is in a subdirectory, bin/Makefile.am:12: but option 'subdir-objects' is disabled bin/Makefile.am:28: warning: source file '$(top_srcdir)/src/release/raw_n50.cpp' is in a subdirectory, bin/Makefile.am:28: but option 'subdir-objects' is disabled bin/Makefile.am:14: warning: source file '$(top_srcdir)/src/tools/sample_reads.cpp' is in a subdirectory, bin/Makefile.am:14: but option 'subdir-objects' is disabled bin/Makefile.am:7: warning: source file '$(top_srcdir)/src/tools/scaffold.cpp' is in a subdirectory, bin/Makefile.am:7: but option 'subdir-objects' is disabled bin/Makefile.am:6: warning: source file '$(top_srcdir)/src/tools/shuffle_reads.cpp' is in a subdirectory, bin/Makefile.am:6: but option 'subdir-objects' is disabled bin/Makefile.am:36: warning: source file '$(top_srcdir)/src/release/sim_reads.cpp' is in a subdirectory, bin/Makefile.am:36: but option 'subdir-objects' is disabled bin/Makefile.am:32: warning: source file '$(top_srcdir)/src/release/sim_reads_tran.cpp' is in a subdirectory, bin/Makefile.am:32: but option 'subdir-objects' is disabled bin/Makefile.am:15: warning: source file '$(top_srcdir)/src/tools/sort_psl.cpp' is in a subdirectory, bin/Makefile.am:15: but option 'subdir-objects' is disabled bin/Makefile.am:16: warning: source file '$(top_srcdir)/src/tools/sort_reads.cpp' is in a subdirectory, bin/Makefile.am:16: but option 'subdir-objects' is disabled bin/Makefile.am:20: warning: source file '$(top_srcdir)/src/tools/split_fa.cpp' is in a subdirectory, bin/Makefile.am:20: but option 'subdir-objects' is disabled bin/Makefile.am:23: warning: source file '$(top_srcdir)/src/tools/split_fq.cpp' is in a subdirectory, bin/Makefile.am:23: but option 'subdir-objects' is disabled bin/Makefile.am:35: warning: source file '$(top_srcdir)/src/release/split_scaffold.cpp' is in a subdirectory, bin/Makefile.am:35: but option 'subdir-objects' is disabled bin/Makefile.am:21: warning: source file '$(top_srcdir)/src/tools/test.cpp' is in a subdirectory, bin/Makefile.am:21: but option 'subdir-objects' is disabled bin/Makefile.am:8: warning: source file '$(top_srcdir)/src/tools/validate_component.cpp' is in a subdirectory, bin/Makefile.am:8: but option 'subdir-objects' is disabled bin/Makefile.am:26: warning: source file '$(top_srcdir)/src/release/validate_contigs_blat.cpp' is in a subdirectory, bin/Makefile.am:26: but option 'subdir-objects' is disabled bin/Makefile.am:11: warning: source file '$(top_srcdir)/src/tools/validate_contigs_mummer.cpp' is in a subdirectory, bin/Makefile.am:11: but option 'subdir-objects' is disabled bin/Makefile.am:22: warning: source file '$(top_srcdir)/src/tools/validate_reads_blat.cpp' is in a subdirectory, bin/Makefile.am:22: but option 'subdir-objects' is disabled bin/Makefile.am:10: warning: source file '$(top_srcdir)/src/tools/validate_rna.cpp' is in a subdirectory, bin/Makefile.am:10: but option 'subdir-objects' is disabled lib/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/basic/math.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/hash_aligner.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/options_description.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/log.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/utils.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/blat_record.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/short_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_reader.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_writer.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_io.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/compact_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/scaffold_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_info.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/local_assembler.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/assembly_utility.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest-all.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled test/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') test/Makefile.am:11: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:11: warning: source file '$(top_srcdir)/src/test/atomic_integer_unittest.cpp' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/src/test/bit_edges_unittest.cpp' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/src/test/compact_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/src/test/hash_map_unittest.cpp' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/src/test/hash_set_unittest.cpp' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/src/test/hash_table_unittest.cpp' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/src/test/histgram_unittest.cpp' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/src/test/kmer_unittest.cpp' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/src/test/managed_list_unittest.cpp' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/src/test/sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/src/test/short_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/src/test/vertex_status_unittest.cpp' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- LDFLAGS="-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" LIBS=" -latomic" ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" "LIBS= -latomic" configure: WARNING: unrecognized options: --disable-maintainer-mode configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabi-g++... arm-linux-gnueabi-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether arm-linux-gnueabi-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabi-g++... none checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabi-gcc... none checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking how to run the C preprocessor... arm-linux-gnueabi-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for working memcmp... no checking for vprintf... yes checking for _doprnt... no checking for sqrt... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating bin/Makefile config.status: creating lib/Makefile config.status: creating test/Makefile config.status: creating script/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in lib make[3]: Entering directory '/<>/lib' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o math.o `test -f '../src/basic/math.cpp' || echo './'`../src/basic/math.cpp In file included from /usr/arm-linux-gnueabi/include/c++/9/algorithm:62, from ../src/basic/math.cpp:3: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:61, from /usr/arm-linux-gnueabi/include/c++/9/algorithm:62, from ../src/basic/math.cpp:3: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 214 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/9/algorithm:62, from ../src/basic/math.cpp:3: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1939 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1953 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h: In function ‘void GenerateNormalCDFTable(int, int, std::vector&)’: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1967 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1968 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1969 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1884 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1889 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_aligner.o `test -f '../src/misc/hash_aligner.cpp' || echo './'`../src/misc/hash_aligner.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o options_description.o `test -f '../src/misc/options_description.cpp' || echo './'`../src/misc/options_description.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o log.o `test -f '../src/misc/log.cpp' || echo './'`../src/misc/log.cpp ../src/misc/log.cpp: In destructor ‘LogProcess::~LogProcess()’: ../src/misc/log.cpp:78:58: warning: throw will always call terminate() [-Wterminate] 78 | throw runtime_error("cannot kill log process"); | ^ ../src/misc/log.cpp:78:58: note: in C++11 destructors default to noexcept ../src/misc/log.cpp: In static member function ‘static void* LogThread::LogThreadFunc(void*)’: ../src/misc/log.cpp:122:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] 122 | write(log_thread.out_fd, line, len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.o `test -f '../src/misc/utils.cpp' || echo './'`../src/misc/utils.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blat_record.o `test -f '../src/misc/blat_record.cpp' || echo './'`../src/misc/blat_record.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o short_sequence.o `test -f '../src/sequence/short_sequence.cpp' || echo './'`../src/sequence/short_sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_reader.o `test -f '../src/sequence/sequence_reader.cpp' || echo './'`../src/sequence/sequence_reader.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_writer.o `test -f '../src/sequence/sequence_writer.cpp' || echo './'`../src/sequence/sequence_writer.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_io.o `test -f '../src/sequence/sequence_io.cpp' || echo './'`../src/sequence/sequence_io.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence.o `test -f '../src/sequence/sequence.cpp' || echo './'`../src/sequence/sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compact_sequence.o `test -f '../src/sequence/compact_sequence.cpp' || echo './'`../src/sequence/compact_sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph_branch_group.o `test -f '../src/graph/contig_graph_branch_group.cpp' || echo './'`../src/graph/contig_graph_branch_group.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph.o `test -f '../src/graph/hash_graph.cpp' || echo './'`../src/graph/hash_graph.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold_graph.o `test -f '../src/graph/scaffold_graph.cpp' || echo './'`../src/graph/scaffold_graph.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph.o `test -f '../src/graph/contig_graph.cpp' || echo './'`../src/graph/contig_graph.cpp ../src/graph/contig_graph.cpp: In member function ‘void ContigGraph::TopSort(std::deque&, std::deque&)’: ../src/graph/contig_graph.cpp:1391:30: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 1391 | ContigGraphVertexAdaptor end = GetEndVertexAdaptor(component); | ^~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph_branch_group.o `test -f '../src/graph/hash_graph_branch_group.cpp' || echo './'`../src/graph/hash_graph_branch_group.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_info.o `test -f '../src/graph/contig_info.cpp' || echo './'`../src/graph/contig_info.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o local_assembler.o `test -f '../src/assembly/local_assembler.cpp' || echo './'`../src/assembly/local_assembler.cpp ../src/assembly/local_assembler.cpp: In static member function ‘static void* LocalAssemblerWithReference::LocalAssembleThread(void*)’: ../src/assembly/local_assembler.cpp:488:22: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 488 | bool flag = false; | ^~~~ ../src/assembly/local_assembler.cpp:489:21: warning: variable ‘aligned’ set but not used [-Wunused-but-set-variable] 489 | int aligned[2] = {0}; | ^~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assembly_utility.o `test -f '../src/assembly/assembly_utility.cpp' || echo './'`../src/assembly/assembly_utility.cpp rm -f libassembly.a ar cru libassembly.a math.o hash_aligner.o options_description.o log.o utils.o blat_record.o short_sequence.o sequence_reader.o sequence_writer.o sequence_io.o sequence.o compact_sequence.o contig_graph_branch_group.o hash_graph.o scaffold_graph.o contig_graph.o hash_graph_branch_group.o contig_info.o local_assembler.o assembly_utility.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabi-ranlib libassembly.a arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest_main.o `test -f '../gtest_src/gtest/gtest_main.cc' || echo './'`../gtest_src/gtest/gtest_main.cc arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest-all.o `test -f '../gtest_src/gtest/gtest-all.cc' || echo './'`../gtest_src/gtest/gtest-all.cc In file included from /usr/arm-linux-gnueabi/include/string.h:495, from ../gtest_src/gtest/gtest.h:285, from ../gtest_src/gtest/gtest-all.cc:39: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘const char* testing::internal::posix::StrNCpy(char*, const char*, size_t)’ at ../gtest_src/gtest/gtest.h:2672:17, inlined from ‘char* testing::internal::CloneString(const char*, size_t)’ at ../gtest_src/gtest/gtest-all.cc:2144:19, inlined from ‘static const char* testing::internal::String::CloneCString(const char*)’ at ../gtest_src/gtest/gtest-all.cc:2155:39: /usr/arm-linux-gnueabi/include/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../gtest_src/gtest/gtest-all.cc: In static member function ‘static const char* testing::internal::String::CloneCString(const char*)’: ../gtest_src/gtest/gtest-all.cc:2155:39: note: length computed here 2155 | NULL : CloneString(c_str, strlen(c_str)); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ rm -f libgtest.a ar cru libgtest.a gtest_main.o gtest-all.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabi-ranlib libgtest.a make[3]: Leaving directory '/<>/lib' Making all in bin make[3]: Entering directory '/<>/bin' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba.o `test -f '../src/release/idba.cpp' || echo './'`../src/release/idba.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba idba.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_ud.o `test -f '../src/release/idba_ud.cpp' || echo './'`../src/release/idba_ud.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_ud idba_ud.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran.o `test -f '../src/release/idba_tran.cpp' || echo './'`../src/release/idba_tran.cpp ../src/release/idba_tran.cpp: In function ‘void FindIsoforms(ContigGraphPath&, std::deque&, ContigGraph&, std::deque&)’: ../src/release/idba_tran.cpp:241:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 241 | if (flag && path.size() > option.min_transcript) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void Assemble(HashGraph&)’: ../src/release/idba_tran.cpp:523:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 523 | if (transcripts[i].size() >= option.min_transcript) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran idba_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_hybrid.o `test -f '../src/release/idba_hybrid.cpp' || echo './'`../src/release/idba_hybrid.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_hybrid idba_hybrid.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle_reads.o `test -f '../src/tools/shuffle_reads.cpp' || echo './'`../src/tools/shuffle_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o shuffle_reads shuffle_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold.o `test -f '../src/tools/scaffold.cpp' || echo './'`../src/tools/scaffold.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o scaffold scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_component.o `test -f '../src/tools/validate_component.cpp' || echo './'`../src/tools/validate_component.cpp ../src/tools/validate_component.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_component.cpp:141:13: warning: unused variable ‘ref_id’ [-Wunused-variable] 141 | int ref_id = dict[record.ref_name]; | ^~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_component validate_component.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fa2fq.o `test -f '../src/tools/fa2fq.cpp' || echo './'`../src/tools/fa2fq.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fa2fq fa2fq.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_rna.o `test -f '../src/tools/validate_rna.cpp' || echo './'`../src/tools/validate_rna.cpp ../src/tools/validate_rna.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_rna.cpp:396:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] 396 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_rna validate_rna.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_mummer.o `test -f '../src/tools/validate_contigs_mummer.cpp' || echo './'`../src/tools/validate_contigs_mummer.cpp ../src/tools/validate_contigs_mummer.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_contigs_mummer.cpp:218:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 218 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:219:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 219 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:220:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 220 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:221:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 221 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:222:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 222 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_mummer validate_contigs_mummer.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_graph.o `test -f '../src/tools/print_graph.cpp' || echo './'`../src/tools/print_graph.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o print_graph print_graph.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran_test.o `test -f '../src/tools/idba_tran_test.cpp' || echo './'`../src/tools/idba_tran_test.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran_test idba_tran_test.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sample_reads.o `test -f '../src/tools/sample_reads.cpp' || echo './'`../src/tools/sample_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sample_reads sample_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_psl.o `test -f '../src/tools/sort_psl.cpp' || echo './'`../src/tools/sort_psl.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_psl sort_psl.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_reads.o `test -f '../src/tools/sort_reads.cpp' || echo './'`../src/tools/sort_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_reads sort_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_contigs.o `test -f '../src/tools/filter_contigs.cpp' || echo './'`../src/tools/filter_contigs.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_contigs filter_contigs.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_rna_blat.o `test -f '../src/tools/parallel_rna_blat.cpp' || echo './'`../src/tools/parallel_rna_blat.cpp ../src/tools/parallel_rna_blat.cpp: In function ‘void CreateFile(const string&)’: ../src/tools/parallel_rna_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RemoveFile(const string&)’: ../src/tools/parallel_rna_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void Append(const string&, const string&)’: ../src/tools/parallel_rna_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RunBlat(const string&)’: ../src/tools/parallel_rna_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_rna_blat parallel_rna_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_blat.o `test -f '../src/tools/filter_blat.cpp' || echo './'`../src/tools/filter_blat.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_blat filter_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fa.o `test -f '../src/tools/split_fa.cpp' || echo './'`../src/tools/split_fa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fa split_fa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test.o `test -f '../src/tools/test.cpp' || echo './'`../src/tools/test.cpp ../src/tools/test.cpp:6:32: warning: extra tokens at end of #include directive 6 | #include "graph/contig_graph.h"; | ^ ../src/tools/test.cpp:7:31: warning: extra tokens at end of #include directive 7 | #include "sequence/sequence.h"; | ^ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o test test.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_reads_blat.o `test -f '../src/tools/validate_reads_blat.cpp' || echo './'`../src/tools/validate_reads_blat.cpp In file included from /usr/arm-linux-gnueabi/include/c++/9/vector:72, from ../src/tools/validate_reads_blat.cpp:16: /usr/arm-linux-gnueabi/include/c++/9/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/9/vector:67, from ../src/tools/validate_reads_blat.cpp:16: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_vector.h: In function ‘int main(int, char**)’: /usr/arm-linux-gnueabi/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 957 | _M_fill_insert(end(), __new_size - size(), __x); | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_reads_blat validate_reads_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fq.o `test -f '../src/tools/split_fq.cpp' || echo './'`../src/tools/split_fq.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fq split_fq.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fq2fa.o `test -f '../src/release/fq2fa.cpp' || echo './'`../src/release/fq2fa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fq2fa fq2fa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_blat.o `test -f '../src/release/validate_contigs_blat.cpp' || echo './'`../src/release/validate_contigs_blat.cpp ../src/release/validate_contigs_blat.cpp: In function ‘int main(int, char**)’: ../src/release/validate_contigs_blat.cpp:388:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] 388 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_blat validate_contigs_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o raw_n50.o `test -f '../src/release/raw_n50.cpp' || echo './'`../src/release/raw_n50.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o raw_n50 raw_n50.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_blat.o `test -f '../src/release/parallel_blat.cpp' || echo './'`../src/release/parallel_blat.cpp ../src/release/parallel_blat.cpp: In function ‘void CreateFile(const string&)’: ../src/release/parallel_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RemoveFile(const string&)’: ../src/release/parallel_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void Append(const string&, const string&)’: ../src/release/parallel_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RunBlat(const string&)’: ../src/release/parallel_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’, declared with attribute warn_unused_result [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_blat parallel_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads_tran.o `test -f '../src/release/sim_reads_tran.cpp' || echo './'`../src/release/sim_reads_tran.cpp ../src/release/sim_reads_tran.cpp: In function ‘int main(int, char**)’: ../src/release/sim_reads_tran.cpp:89:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] 89 | fscanf(flist, "%s %lf", buf, &weight[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads_tran sim_reads_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filterfa.o `test -f '../src/release/filterfa.cpp' || echo './'`../src/release/filterfa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filterfa filterfa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_scaffold.o `test -f '../src/release/split_scaffold.cpp' || echo './'`../src/release/split_scaffold.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_scaffold split_scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads.o `test -f '../src/release/sim_reads.cpp' || echo './'`../src/release/sim_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads sim_reads.o ../lib/libassembly.a -latomic make[3]: Leaving directory '/<>/bin' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' Making all in script make[3]: Entering directory '/<>/script' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/script' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_installdirs -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in bin make[2]: Entering directory '/<>/bin' make[3]: Entering directory '/<>/bin' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c idba idba_ud idba_tran idba_hybrid '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/bin' make[2]: Leaving directory '/<>/bin' Making install in test make[2]: Entering directory '/<>/test' make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>/test' Making install in script make[2]: Entering directory '/<>/script' make[3]: Entering directory '/<>/script' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c scan.py run-unittest.py validate_blat validate_blat_parallel '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/script' make[2]: Leaving directory '/<>/script' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # for the moment the role of these scripts is totally unknown but they do not seem to be necessary mv debian/idba/usr/bin/*.py debian/idba/usr/lib/idba/ mv debian/idba/usr/bin/validate_blat* debian/idba/usr/lib/idba/ make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/bin/run-unittest.py exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: idba (7), idba-extra (23) * dh_installdocs: idba (0), idba-extra (0) * dh_installexamples: idba (5), idba-extra (0) * dh_installman: idba (4), idba-extra (5) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_ud contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_hybrid contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_reads_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/print_graph contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_rna_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_mummer contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_psl contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fq2fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_rna contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_component contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/raw_n50 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_contigs contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/shuffle_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sample_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fa2fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'idba' in '../idba_1.1.3-7_armel.deb'. dpkg-deb: building package 'idba-dbgsym' in '../idba-dbgsym_1.1.3-7_armel.deb'. dpkg-deb: building package 'idba-extra' in '../idba-extra_1.1.3-7_armel.deb'. dpkg-deb: building package 'idba-extra-dbgsym' in '../idba-extra-dbgsym_1.1.3-7_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../idba_1.1.3-7_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-05-11T12:23:34Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ idba_1.1.3-7_armel.changes: --------------------------- Format: 1.8 Date: Sat, 18 Apr 2020 08:20:19 +0200 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 1.1.3-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: idba - iterative De Bruijn Graph short read assemblers idba-extra - iterative De Bruijn Graph short read assemblers (extra tools) Changes: idba (1.1.3-7) unstable; urgency=medium . * Rules-Requires-Root: no (routine-update) Checksums-Sha1: ab6b5a1ac2a5c7d0f62aab7b5b12eb3af3a9e5cc 10296136 idba-dbgsym_1.1.3-7_armel.deb bfd2d7f350e5db877dd18718716d6d70cc78f40c 8163800 idba-extra-dbgsym_1.1.3-7_armel.deb 3e793a4ee978e4832bdaf6fc121cd35ff2e6195d 344924 idba-extra_1.1.3-7_armel.deb b110f00e452b2a6ef14eeda79342354ed8eb6b6f 5043 idba_1.1.3-7_armel.buildinfo 1620e99e54606d588160fcbbb95c099adc681eae 605220 idba_1.1.3-7_armel.deb Checksums-Sha256: ac9ab7d8ce08fa42bcf3a70f44006d5fc45b18d081e9aa135958d8cefe0b13fb 10296136 idba-dbgsym_1.1.3-7_armel.deb 5b86cd8afcc9e6e6418e25bee867fe538290905a403dc57130317966ac4ee20e 8163800 idba-extra-dbgsym_1.1.3-7_armel.deb d09df0b876b5d7d845ca3078c404bcbc6a9a0629cc8344961c68433b36df9a68 344924 idba-extra_1.1.3-7_armel.deb 86de3b3e835a8bbdf23bddade65b4800ca3cd33f557ee182e78c7a53c4f67554 5043 idba_1.1.3-7_armel.buildinfo f9205af198231df0197a538fe7217a75f309b3a12eabd9f7c2d8eddb2c869ebd 605220 idba_1.1.3-7_armel.deb Files: 3d9d266f7503e2bb05975fba783dde44 10296136 debug optional idba-dbgsym_1.1.3-7_armel.deb 0c0bde1bd7a9c09e02c1a00fa2b2dd31 8163800 debug optional idba-extra-dbgsym_1.1.3-7_armel.deb 0492da2b810e5f4ecb24e5e407bc3bad 344924 science optional idba-extra_1.1.3-7_armel.deb 43ad8b44f8c327d56483e356305ec555 5043 science optional idba_1.1.3-7_armel.buildinfo fdced36c8451a586b1a5a319a183bc6e 605220 science optional idba_1.1.3-7_armel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: idba Binary: idba idba-extra Architecture: armel Version: 1.1.3-7 Checksums-Md5: 3d9d266f7503e2bb05975fba783dde44 10296136 idba-dbgsym_1.1.3-7_armel.deb 0c0bde1bd7a9c09e02c1a00fa2b2dd31 8163800 idba-extra-dbgsym_1.1.3-7_armel.deb 0492da2b810e5f4ecb24e5e407bc3bad 344924 idba-extra_1.1.3-7_armel.deb fdced36c8451a586b1a5a319a183bc6e 605220 idba_1.1.3-7_armel.deb Checksums-Sha1: ab6b5a1ac2a5c7d0f62aab7b5b12eb3af3a9e5cc 10296136 idba-dbgsym_1.1.3-7_armel.deb bfd2d7f350e5db877dd18718716d6d70cc78f40c 8163800 idba-extra-dbgsym_1.1.3-7_armel.deb 3e793a4ee978e4832bdaf6fc121cd35ff2e6195d 344924 idba-extra_1.1.3-7_armel.deb 1620e99e54606d588160fcbbb95c099adc681eae 605220 idba_1.1.3-7_armel.deb Checksums-Sha256: ac9ab7d8ce08fa42bcf3a70f44006d5fc45b18d081e9aa135958d8cefe0b13fb 10296136 idba-dbgsym_1.1.3-7_armel.deb 5b86cd8afcc9e6e6418e25bee867fe538290905a403dc57130317966ac4ee20e 8163800 idba-extra-dbgsym_1.1.3-7_armel.deb d09df0b876b5d7d845ca3078c404bcbc6a9a0629cc8344961c68433b36df9a68 344924 idba-extra_1.1.3-7_armel.deb f9205af198231df0197a538fe7217a75f309b3a12eabd9f7c2d8eddb2c869ebd 605220 idba_1.1.3-7_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 11 May 2020 12:23:33 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-6), binutils-common (= 2.34-6), binutils-x86-64-linux-gnu (= 2.34-6), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.35.1-3), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-12), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.0-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-12), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-1), gcc-9 (= 9.3.0-12), gcc-9-base (= 9.3.0-12), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-12), libatomic1 (= 10.1.0-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-6), libblkid1 (= 2.35.1-3), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-7), libc-dev-bin (= 2.30-7), libc6 (= 2.30-7), libc6-dev (= 2.30-7), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10.1.0-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-6), libctf0 (= 2.34-6), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.0-1), libgcc-9-dev (= 9.3.0-12), libgcc-s1 (= 10.1.0-1), libgcc1 (= 1:10.1.0-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.2-1), libgmp10 (= 2:6.2.0+dfsg-4), libgomp1 (= 10.1.0-1), libgpg-error0 (= 1.37-1), libicu63 (= 63.2-3), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-1), liblsan0 (= 10.1.0-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.35.1-3), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-10), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10.1.0-1), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.1-3), libstdc++-9-dev (= 9.3.0-12), libstdc++6 (= 10.1.0-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.5-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-1), libubsan1 (= 10.1.0-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.5-2), libunistring2 (= 0.9.10-2), libuuid1 (= 2.35.1-3), libxml2 (= 2.9.10+dfsg-5), linux-libc-dev (= 5.6.7-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-2+b1), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.0-10), perl-base (= 5.30.0-10), perl-modules-5.30 (= 5.30.0-10), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.1-3), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587190819" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ idba-dbgsym_1.1.3-7_armel.deb ----------------------------- new Debian package, version 2.0. size 10296136 bytes: control archive=736 bytes. 483 bytes, 12 lines control 506 bytes, 5 lines md5sums Package: idba-dbgsym Source: idba Version: 1.1.3-7 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 10537 Depends: idba (= 1.1.3-7) Section: debug Priority: optional Description: debug symbols for idba Build-Ids: 338011642532b322dcefd5a03b604174d8a3573d 72d9d07749984c3676f9a408d3366fe098da0a48 895f0019a75b079c1305934af2c150f8df36a0bc fe5fa86ce737f35144f5d4fd4785a162870b9cae drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/33/ -rw-r--r-- root/root 2567752 2020-04-18 06:20 ./usr/lib/debug/.build-id/33/8011642532b322dcefd5a03b604174d8a3573d.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/72/ -rw-r--r-- root/root 2410340 2020-04-18 06:20 ./usr/lib/debug/.build-id/72/d9d07749984c3676f9a408d3366fe098da0a48.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/89/ -rw-r--r-- root/root 2103932 2020-04-18 06:20 ./usr/lib/debug/.build-id/89/5f0019a75b079c1305934af2c150f8df36a0bc.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/fe/ -rw-r--r-- root/root 2460528 2020-04-18 06:20 ./usr/lib/debug/.build-id/fe/5fa86ce737f35144f5d4fd4785a162870b9cae.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 1230556 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabi/idba.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-dbgsym -> idba idba-extra-dbgsym_1.1.3-7_armel.deb ----------------------------------- new Debian package, version 2.0. size 8163800 bytes: control archive=1656 bytes. 1279 bytes, 12 lines control 2526 bytes, 24 lines md5sums Package: idba-extra-dbgsym Source: idba Version: 1.1.3-7 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 8772 Depends: idba-extra (= 1.1.3-7) Section: debug Priority: optional Description: debug symbols for idba-extra Build-Ids: 1352f35eca83938cc75c7588ea35e9e84fd78ab9 1a9a897dc0a082a30123a508819501e5c3401cd6 2378e711b7d25a098ad6058d00f0bbaaface46ac 31f55018dc6c355d167a6f28933cce7869e5a27e 3ad99f0d70197034b439206cf648ec5844e21604 53db5d41ae38448c93ec9e3b75325786e178d5a0 5824d7cb31de03549d0297570c1c1b33e2598521 5934e464afd6b62845ec6b2661725666bafe41be 64faf60c49b3c4c67f090014693992424d74ed90 7fd76a248661bc3b93fe00ee767352f66913f1f0 8120b3b987cbde0aba2569a85d49fa0d11d1edb7 8734bd09c2b7b4eda9993c4c04a58c0d08489e39 8c9854e343aade972c51981598650fb31c230bf6 902e98afcdc900c0b095a66205625b65b2cc1a36 9538570273cd35b27cd400873a256ef55dd23c92 bfdb0ef8a3f7348a35aeaae42854f2231ad526d8 c2f5ba65dc07642e27c692277ecf643605ffbd12 d7e411535e39bb062eeb969b5514a0fc85d17b03 d9471d3530c3bd72797d306a1c29885bcddc44b5 ed44f16450fd9594ff983c44fe34025af7a1dd2b f19f07c456127ae9772efdee5a155040a2f4a867 f406436ea160c6dba5d116f0d6ab2e343d244aea fe561cd336d7deafe18f3366ccff4e2ff3ac59b4 drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/13/ -rw-r--r-- root/root 336332 2020-04-18 06:20 ./usr/lib/debug/.build-id/13/52f35eca83938cc75c7588ea35e9e84fd78ab9.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/1a/ -rw-r--r-- root/root 131232 2020-04-18 06:20 ./usr/lib/debug/.build-id/1a/9a897dc0a082a30123a508819501e5c3401cd6.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 206860 2020-04-18 06:20 ./usr/lib/debug/.build-id/23/78e711b7d25a098ad6058d00f0bbaaface46ac.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/31/ -rw-r--r-- root/root 254132 2020-04-18 06:20 ./usr/lib/debug/.build-id/31/f55018dc6c355d167a6f28933cce7869e5a27e.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/3a/ -rw-r--r-- root/root 195412 2020-04-18 06:20 ./usr/lib/debug/.build-id/3a/d99f0d70197034b439206cf648ec5844e21604.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/53/ -rw-r--r-- root/root 254132 2020-04-18 06:20 ./usr/lib/debug/.build-id/53/db5d41ae38448c93ec9e3b75325786e178d5a0.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/58/ -rw-r--r-- root/root 993124 2020-04-18 06:20 ./usr/lib/debug/.build-id/58/24d7cb31de03549d0297570c1c1b33e2598521.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/59/ -rw-r--r-- root/root 384152 2020-04-18 06:20 ./usr/lib/debug/.build-id/59/34e464afd6b62845ec6b2661725666bafe41be.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/64/ -rw-r--r-- root/root 125996 2020-04-18 06:20 ./usr/lib/debug/.build-id/64/faf60c49b3c4c67f090014693992424d74ed90.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/7f/ -rw-r--r-- root/root 123096 2020-04-18 06:20 ./usr/lib/debug/.build-id/7f/d76a248661bc3b93fe00ee767352f66913f1f0.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/81/ -rw-r--r-- root/root 466852 2020-04-18 06:20 ./usr/lib/debug/.build-id/81/20b3b987cbde0aba2569a85d49fa0d11d1edb7.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/87/ -rw-r--r-- root/root 2479668 2020-04-18 06:20 ./usr/lib/debug/.build-id/87/34bd09c2b7b4eda9993c4c04a58c0d08489e39.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/8c/ -rw-r--r-- root/root 119244 2020-04-18 06:20 ./usr/lib/debug/.build-id/8c/9854e343aade972c51981598650fb31c230bf6.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/90/ -rw-r--r-- root/root 244752 2020-04-18 06:20 ./usr/lib/debug/.build-id/90/2e98afcdc900c0b095a66205625b65b2cc1a36.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/95/ -rw-r--r-- root/root 213172 2020-04-18 06:20 ./usr/lib/debug/.build-id/95/38570273cd35b27cd400873a256ef55dd23c92.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/bf/ -rw-r--r-- root/root 213172 2020-04-18 06:20 ./usr/lib/debug/.build-id/bf/db0ef8a3f7348a35aeaae42854f2231ad526d8.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/c2/ -rw-r--r-- root/root 125972 2020-04-18 06:20 ./usr/lib/debug/.build-id/c2/f5ba65dc07642e27c692277ecf643605ffbd12.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/d7/ -rw-r--r-- root/root 154116 2020-04-18 06:20 ./usr/lib/debug/.build-id/d7/e411535e39bb062eeb969b5514a0fc85d17b03.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/d9/ -rw-r--r-- root/root 139068 2020-04-18 06:20 ./usr/lib/debug/.build-id/d9/471d3530c3bd72797d306a1c29885bcddc44b5.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/ed/ -rw-r--r-- root/root 372484 2020-04-18 06:20 ./usr/lib/debug/.build-id/ed/44f16450fd9594ff983c44fe34025af7a1dd2b.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/f1/ -rw-r--r-- root/root 198860 2020-04-18 06:20 ./usr/lib/debug/.build-id/f1/9f07c456127ae9772efdee5a155040a2f4a867.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/f4/ -rw-r--r-- root/root 234456 2020-04-18 06:20 ./usr/lib/debug/.build-id/f4/06436ea160c6dba5d116f0d6ab2e343d244aea.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/fe/ -rw-r--r-- root/root 327756 2020-04-18 06:20 ./usr/lib/debug/.build-id/fe/561cd336d7deafe18f3366ccff4e2ff3ac59b4.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 638196 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabi/idba-extra.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra-dbgsym -> idba-extra idba-extra_1.1.3-7_armel.deb ---------------------------- new Debian package, version 2.0. size 344924 bytes: control archive=1872 bytes. 1473 bytes, 30 lines control 1765 bytes, 30 lines md5sums Package: idba-extra Source: idba Version: 1.1.3-7 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 2028 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 5.2), python3, idba Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers (extra tools) IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. . This package ships extra tools for using idba in specific situations. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 34444 2020-04-18 06:20 ./usr/bin/fa2fq -rwxr-xr-x root/root 38484 2020-04-18 06:20 ./usr/bin/filter_blat -rwxr-xr-x root/root 34448 2020-04-18 06:20 ./usr/bin/filter_contigs -rwxr-xr-x root/root 38540 2020-04-18 06:20 ./usr/bin/fq2fa -rwxr-xr-x root/root 59028 2020-04-18 06:20 ./usr/bin/parallel_blat -rwxr-xr-x root/root 59028 2020-04-18 06:20 ./usr/bin/parallel_rna_blat -rwxr-xr-x root/root 267952 2020-04-18 06:20 ./usr/bin/print_graph -rwxr-xr-x root/root 54928 2020-04-18 06:20 ./usr/bin/raw_n50 -rwxr-xr-x root/root 71340 2020-04-18 06:20 ./usr/bin/sample_reads -rwxr-xr-x root/root 533236 2020-04-18 06:20 ./usr/bin/scaffold -rwxr-xr-x root/root 59020 2020-04-18 06:20 ./usr/bin/shuffle_reads -rwxr-xr-x root/root 71340 2020-04-18 06:20 ./usr/bin/sim_reads -rwxr-xr-x root/root 67244 2020-04-18 06:20 ./usr/bin/sim_reads_tran -rwxr-xr-x root/root 46676 2020-04-18 06:20 ./usr/bin/sort_psl -rwxr-xr-x root/root 63116 2020-04-18 06:20 ./usr/bin/sort_reads -rwxr-xr-x root/root 34444 2020-04-18 06:20 ./usr/bin/split_fa -rwxr-xr-x root/root 34444 2020-04-18 06:20 ./usr/bin/split_fq -rwxr-xr-x root/root 42636 2020-04-18 06:20 ./usr/bin/split_scaffold -rwxr-xr-x root/root 95884 2020-04-18 06:20 ./usr/bin/validate_component -rwxr-xr-x root/root 83596 2020-04-18 06:20 ./usr/bin/validate_contigs_blat -rwxr-xr-x root/root 87724 2020-04-18 06:20 ./usr/bin/validate_contigs_mummer -rwxr-xr-x root/root 87692 2020-04-18 06:20 ./usr/bin/validate_reads_blat -rwxr-xr-x root/root 83596 2020-04-18 06:20 ./usr/bin/validate_rna drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba-extra/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba-extra/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 416 2020-04-18 06:20 ./usr/share/man/man1/filter_blat.1.gz -rw-r--r-- root/root 438 2020-04-18 06:20 ./usr/share/man/man1/filter_contigs.1.gz -rw-r--r-- root/root 426 2020-04-18 06:20 ./usr/share/man/man1/fq2fa.1.gz -rw-r--r-- root/root 483 2020-04-18 06:20 ./usr/share/man/man1/sim_reads.1.gz -rw-r--r-- root/root 460 2020-04-18 06:20 ./usr/share/man/man1/sim_reads_tran.1.gz idba_1.1.3-7_armel.deb ---------------------- new Debian package, version 2.0. size 605220 bytes: control archive=1692 bytes. 1360 bytes, 27 lines control 1599 bytes, 23 lines md5sums Package: idba Version: 1.1.3-7 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 3866 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 5.2), python3 Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 570092 2020-04-18 06:20 ./usr/bin/idba -rwxr-xr-x root/root 647916 2020-04-18 06:20 ./usr/bin/idba_hybrid -rwxr-xr-x root/root 571056 2020-04-18 06:20 ./usr/bin/idba_tran -rwxr-xr-x root/root 639724 2020-04-18 06:20 ./usr/bin/idba_ud drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/idba/ -rwxr-xr-x root/root 4144 2020-04-18 06:20 ./usr/lib/idba/scan.py -rwxr-xr-x root/root 301 2020-04-18 06:20 ./usr/lib/idba/validate_blat -rwxr-xr-x root/root 223 2020-04-18 06:20 ./usr/lib/idba/validate_blat_parallel drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ -rw-r--r-- root/root 1015 2020-04-18 06:20 ./usr/share/doc/idba/examples/README -rw-r--r-- root/root 719 2020-04-18 06:20 ./usr/share/doc/idba/examples/data-source.sh drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ -rw-r--r-- root/root 10750 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_ref.fa -rw-r--r-- root/root 5085 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_target.fa -rw-r--r-- root/root 10732 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/efergusonii_ref.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/ -rw-r--r-- root/root 565135 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa -rw-r--r-- root/root 886740 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa.list drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/ -rw-r--r-- root/root 5072 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/220668.fa -rw-r--r-- root/root 5098 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/321956.fa -rw-r--r-- root/root 5084 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/557433.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 813 2020-04-18 06:20 ./usr/share/man/man1/idba.1.gz -rw-r--r-- root/root 941 2020-04-18 06:20 ./usr/share/man/man1/idba_hybrid.1.gz -rw-r--r-- root/root 856 2020-04-18 06:20 ./usr/share/man/man1/idba_tran.1.gz -rw-r--r-- root/root 905 2020-04-18 06:20 ./usr/share/man/man1/idba_ud.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [557 B] Get:5 copy:/<>/apt_archive ./ Packages [620 B] Fetched 2140 B in 0s (90.0 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armel t1utils 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 9226 kB of archives. After this operation, 26.3 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-5 [661 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b3 [38.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.19-1 [126 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 4 [7148 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-3 [320 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.067-1 [212 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3200-1 [39.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.23-1 [369 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004001-1 [13.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.112-1 [53.5 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010001-1 [338 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.72.0 [1290 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9226 kB in 0s (47.1 MB/s) Selecting previously unselected package readline-common. (Reading database ... 19984 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.31.1-5_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.31.1-5) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../20-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../21-libclass-xsaccessor-perl_1.19-3+b3_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b3) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../22-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../23-libcpanel-json-xs-perl_4.19-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.19-1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../24-libdevel-size-perl_0.83-1+b1_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../25-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../26-libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../27-perl-openssl-defaults_4_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (4) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../28-libnet-ssleay-perl_1.88-3_amd64.deb ... Unpacking libnet-ssleay-perl (1.88-3) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../29-libio-socket-ssl-perl_2.067-1_all.deb ... Unpacking libio-socket-ssl-perl (2.067-1) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../30-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../31-libtimedate-perl_2.3200-1_all.deb ... Unpacking libtimedate-perl (2.3200-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../32-libmailtools-perl_2.21-1_all.deb ... Unpacking libmailtools-perl (2.21-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../33-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../34-libnet-dns-perl_1.23-1_all.deb ... Unpacking libnet-dns-perl (1.23-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../35-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../36-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../37-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../38-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../39-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../40-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../41-libtext-glob-perl_0.10-1_all.deb ... Unpacking libtext-glob-perl (0.10-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../42-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../43-libfont-ttf-perl_1.06-1_all.deb ... Unpacking libfont-ttf-perl (1.06-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../44-libfuture-perl_0.45-1_all.deb ... Unpacking libfuture-perl (0.45-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../45-libhtml-tagset-perl_3.20-4_all.deb ... Unpacking libhtml-tagset-perl (3.20-4) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../46-liburi-perl_1.76-2_all.deb ... Unpacking liburi-perl (1.76-2) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../47-libhtml-parser-perl_3.72-5_amd64.deb ... Unpacking libhtml-parser-perl (3.72-5) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../48-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../49-libstruct-dumb-perl_0.12-1_all.deb ... Unpacking libstruct-dumb-perl (0.12-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../50-libio-async-perl_0.75-1_all.deb ... Unpacking libio-async-perl (0.75-1) ... Selecting previously unselected package liblinux-epoll-perl. Preparing to unpack .../51-liblinux-epoll-perl_0.017-1_amd64.deb ... Unpacking liblinux-epoll-perl (0.017-1) ... Selecting previously unselected package libio-async-loop-epoll-perl. Preparing to unpack .../52-libio-async-loop-epoll-perl_0.20-1_all.deb ... Unpacking libio-async-loop-epoll-perl (0.20-1) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../53-libjson-maybexs-perl_1.004001-1_all.deb ... Unpacking libjson-maybexs-perl (1.004001-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../54-liblist-compare-perl_0.53-1_all.deb ... Unpacking liblist-compare-perl (0.53-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../55-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../56-librole-tiny-perl_2.001004-1_all.deb ... Unpacking librole-tiny-perl (2.001004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../57-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../58-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../59-libmoo-perl_2.004000-1_all.deb ... Unpacking libmoo-perl (2.004000-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../60-libmoox-aliases-perl_0.001006-1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../61-libpackage-stash-perl_0.38-1_all.deb ... Unpacking libpackage-stash-perl (0.38-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../62-libsub-identify-perl_0.14-1+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b2) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../63-libsub-name-perl_0.26-1_amd64.deb ... Unpacking libsub-name-perl (0.26-1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../64-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../65-libpath-tiny-perl_0.112-1_all.deb ... Unpacking libpath-tiny-perl (0.112-1) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../66-libsereal-decoder-perl_4.011+ds-1_amd64.deb ... Unpacking libsereal-decoder-perl (4.011+ds-1) ... Selecting previously unselected package libsereal-encoder-perl. Preparing to unpack .../67-libsereal-encoder-perl_4.011+ds-1_amd64.deb ... Unpacking libsereal-encoder-perl (4.011+ds-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../68-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtype-tiny-perl. Preparing to unpack .../69-libtype-tiny-perl_1.010001-1_all.deb ... Unpacking libtype-tiny-perl (1.010001-1) ... Selecting previously unselected package libunicode-utf8-perl. Preparing to unpack .../70-libunicode-utf8-perl_0.62-1+b1_amd64.deb ... Unpacking libunicode-utf8-perl (0.62-1+b1) ... Selecting previously unselected package libxml-writer-perl. Preparing to unpack .../71-libxml-writer-perl_0.625-1_all.deb ... Unpacking libxml-writer-perl (0.625-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../72-libyaml-0-2_0.2.2-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../73-libyaml-libyaml-perl_0.82+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.82+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../74-patchutils_0.3.4-2+b1_amd64.deb ... Unpacking patchutils (0.3.4-2+b1) ... Selecting previously unselected package t1utils. Preparing to unpack .../75-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package lintian. Preparing to unpack .../76-lintian_2.72.0_all.deb ... Unpacking lintian (2.72.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armel. Preparing to unpack .../77-sbuild-build-depends-lintian-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b3) ... Setting up libunicode-utf8-perl (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.12-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libclone-perl (0.45-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libcpanel-json-xs-perl (4.19-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up libsqlite3-0:amd64 (3.31.1-5) ... Setting up libfuture-perl (0.45-1) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (4) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libsereal-encoder-perl (4.011+ds-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.75-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libjson-maybexs-perl (1.004001-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up libxml-writer-perl (0.625-1) ... Setting up t1utils (1.41-4) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3200-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.112-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.011+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010001-1) ... Setting up libnet-dns-perl (1.23-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.72.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 285036 Build-Time: 222 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 17 Job: idba_1.1.3-7 Lintian: pass Machine Architecture: amd64 Package: idba Package-Time: 249 Source-Version: 1.1.3-7 Space: 285036 Status: successful Version: 1.1.3-7 -------------------------------------------------------------------------------- Finished at 2020-05-11T12:23:34Z Build needed 00:04:09, 285036k disk space