sbuild (Debian sbuild) 0.81.2 (31 January 2021) on debian-ci-siliconvalley +==============================================================================+ | idba 1.1.3-7 (armhf) Mon, 05 Sep 2022 12:04:08 +0000 | +==============================================================================+ Package: idba Version: 1.1.3-7 Source Version: 1.1.3-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-9f7cf409-3c32-4852-a33e-99b2811a776d' with '<>' I: NOTICE: Log filtering will replace 'build/idba-rMitSY/resolver-GpVq72' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [192 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-09-05-0803.06-F-2022-09-04-2003.55.pdiff [34.2 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-09-05-0803.06-F-2022-09-04-2003.55.pdiff [32.2 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-09-05-0803.06-F-2022-09-04-2003.55.pdiff [34.2 kB] Get:6 http://localhost:3142/debian sid/main armhf Packages [8960 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-09-05-0803.06-F-2022-09-04-2003.55.pdiff [32.2 kB] Fetched 9346 kB in 3s (3605 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libgdbm-compat4 libgdbm6 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 141 kB of archives. After this operation, 2048 B disk space will be freed. Get:1 http://localhost:3142/debian sid/main amd64 libgdbm6 amd64 1.23-2 [82.7 kB] Get:2 http://localhost:3142/debian sid/main amd64 libgdbm-compat4 amd64 1.23-2 [58.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 141 kB in 0s (0 B/s) (Reading database ... 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Processing triggers for libc-bin (2.34-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'idba' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/idba.git Please use: git clone https://salsa.debian.org/med-team/idba.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 711 kB of source archives. Get:1 http://localhost:3142/debian sid/main idba 1.1.3-7 (dsc) [2022 B] Get:2 http://localhost:3142/debian sid/main idba 1.1.3-7 (tar) [446 kB] Get:3 http://localhost:3142/debian sid/main idba 1.1.3-7 (diff) [263 kB] Fetched 711 kB in 3s (222 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/idba-rMitSY/idba-1.1.3' with '<>' I: NOTICE: Log filtering will replace 'build/idba-rMitSY' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf Filtered Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [426 B] Get:5 copy:/<>/apt_archive ./ Packages [491 B] Fetched 1874 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cpp-12-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-base:armhf gcc-12-arm-linux-gnueabihf gcc-12-arm-linux-gnueabihf-base gcc-12-base:armhf gcc-12-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armhf libgcc-12-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu71 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armhf libnsl2:armhf libpipeline1 libssl3:armhf libstdc++-11-dev:armhf libstdc++-12-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf krb5-doc:armhf krb5-user:armhf libstdc++-11-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl krb5-locales:armhf libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf bsdextrautils cpp-12-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-11-base:armhf gcc-12-arm-linux-gnueabihf gcc-12-arm-linux-gnueabihf-base gcc-12-base:armhf gcc-12-cross-base gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armhf libasan8-armhf-cross libatomic1:armhf libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf libc6-dev-armhf-cross libcom-err2:armhf libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armhf libgcc-12-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross libgomp1:armhf libgomp1-armhf-cross libgssapi-krb5-2:armhf libicu71 libio-string-perl libk5crypto3:armhf libkeyutils1:armhf libkrb5-3:armhf libkrb5support0:armhf liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armhf libnsl2:armhf libpipeline1 libssl3:armhf libstdc++-11-dev:armhf libstdc++-12-dev-armhf-cross libstdc++6:armhf libstdc++6-armhf-cross libsub-override-perl libtirpc-dev:armhf libtirpc3:armhf libtool libubsan1:armhf libubsan1-armhf-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armhf linux-libc-dev-armhf-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armhf sensible-utils ucf 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 84.4 MB of archives. After this operation, 329 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b2 [19.2 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-9 [175 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-1 [145 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.6-2 [39.4 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.10.2-3 [1413 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-9 [510 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabihf amd64 2.38.90.20220713-2 [3174 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabihf-base amd64 12.2.0-1cross1 [208 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-arm-linux-gnueabihf amd64 12.2.0-1cross1 [8667 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabihf amd64 4:12.2.0-1 [17.2 kB] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-1cross1 [203 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-armhf-cross all 2.34-3cross1 [1073 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-armhf-cross all 12.2.0-1cross1 [36.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-armhf-cross all 12.2.0-1cross1 [94.8 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-armhf-cross all 12.2.0-1cross1 [6768 B] Get:29 http://localhost:3142/debian sid/main amd64 libasan8-armhf-cross all 12.2.0-1cross1 [2113 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-armhf-cross all 12.2.0-1cross1 [477 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-armhf-cross all 12.2.0-1cross1 [855 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-armhf-cross all 12.2.0-1cross1 [742 kB] Get:33 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabihf amd64 12.2.0-1cross1 [17.0 MB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabihf amd64 4:12.2.0-1 [1464 B] Get:35 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armhf-cross all 5.18.16-1cross1 [1703 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armhf-cross all 2.34-3cross1 [1411 kB] Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-armhf-cross all 12.2.0-1cross1 [2036 kB] Get:38 http://localhost:3142/debian sid/main amd64 g++-12-arm-linux-gnueabihf amd64 12.2.0-1cross1 [9597 kB] Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabihf amd64 4:12.2.0-1 [1180 B] Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:42 http://localhost:3142/debian sid/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-2 [21.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1 [337 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-1 [17.3 kB] Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armhf all 12.9 [6708 B] Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.9.1 [196 kB] Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-4 [526 kB] Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-3 [10.4 kB] Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:63 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.187-2 [179 kB] Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-9 [1315 kB] Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.9.1 [1071 kB] Get:69 http://localhost:3142/debian sid/main armhf gcc-11-base armhf 11.3.0-5 [209 kB] Get:70 http://localhost:3142/debian sid/main armhf gcc-12-base armhf 12.2.0-1 [208 kB] Get:71 http://localhost:3142/debian sid/main armhf libgcc-s1 armhf 12.2.0-1 [36.6 kB] Get:72 http://localhost:3142/debian sid/main armhf libc6 armhf 2.34-7 [2388 kB] Get:73 http://localhost:3142/debian sid/main armhf libasan6 armhf 11.3.0-5 [1971 kB] Get:74 http://localhost:3142/debian sid/main armhf libatomic1 armhf 12.2.0-1 [6992 B] Get:75 http://localhost:3142/debian sid/main armhf linux-libc-dev armhf 5.19.6-1 [1591 kB] Get:76 http://localhost:3142/debian sid/main armhf libcrypt1 armhf 1:4.4.28-2 [96.2 kB] Get:77 http://localhost:3142/debian sid/main armhf libcrypt-dev armhf 1:4.4.28-2 [125 kB] Get:78 http://localhost:3142/debian sid/main armhf libcom-err2 armhf 1.46.5-2 [74.8 kB] Get:79 http://localhost:3142/debian sid/main armhf libkrb5support0 armhf 1.20-1 [62.8 kB] Get:80 http://localhost:3142/debian sid/main armhf libk5crypto3 armhf 1.20-1 [108 kB] Get:81 http://localhost:3142/debian sid/main armhf libkeyutils1 armhf 1.6.3-1 [14.7 kB] Get:82 http://localhost:3142/debian sid/main armhf libssl3 armhf 3.0.5-2 [1678 kB] Get:83 http://localhost:3142/debian sid/main armhf libkrb5-3 armhf 1.20-1 [320 kB] Get:84 http://localhost:3142/debian sid/main armhf libgssapi-krb5-2 armhf 1.20-1 [144 kB] Get:85 http://localhost:3142/debian sid/main armhf libtirpc3 armhf 1.3.3+ds-1 [72.9 kB] Get:86 http://localhost:3142/debian sid/main armhf libnsl2 armhf 1.3.0-2 [33.9 kB] Get:87 http://localhost:3142/debian sid/main armhf libtirpc-dev armhf 1.3.3+ds-1 [182 kB] Get:88 http://localhost:3142/debian sid/main armhf libnsl-dev armhf 1.3.0-2 [62.1 kB] Get:89 http://localhost:3142/debian sid/main armhf libc6-dev armhf 2.34-7 [1446 kB] Get:90 http://localhost:3142/debian sid/main armhf libgomp1 armhf 12.2.0-1 [97.0 kB] Get:91 http://localhost:3142/debian sid/main armhf libstdc++6 armhf 12.2.0-1 [519 kB] Get:92 http://localhost:3142/debian sid/main armhf libubsan1 armhf 12.2.0-1 [856 kB] Get:93 http://localhost:3142/debian sid/main armhf libgcc-11-dev armhf 11.3.0-5 [709 kB] Get:94 http://localhost:3142/debian sid/main armhf libstdc++-11-dev armhf 11.3.0-5 [1981 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 84.4 MB in 0s (185 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 13612 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-4+b2_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-9_amd64.deb ... Unpacking gettext-base (0.21-9) ... 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-s1-armhf-cross (12.2.0-1cross1) ... Setting up libdebhelper-perl (13.9.1) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:armhf (5.19.6-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-9) ... Setting up m4 (1.4.19-1) ... Setting up file (1:5.41-4) ... Setting up libatomic1-armhf-cross (12.2.0-1cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up gcc-12-base:armhf (12.2.0-1) ... Setting up libxml-sax-base-perl (1.09-2) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libstdc++6-armhf-cross (12.2.0-1cross1) ... Setting up gcc-12-arm-linux-gnueabihf-base:amd64 (12.2.0-1cross1) ... Setting up linux-libc-dev-armhf-cross (5.18.16-1cross1) ... Setting up autopoint (0.21-9) ... Setting up libubsan1-armhf-cross (12.2.0-1cross1) ... Setting up autoconf (2.71-2) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-3) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up binutils-arm-linux-gnueabihf (2.38.90.20220713-2) ... Setting up libelf1:amd64 (0.187-2) ... Setting up libxml2:amd64 (2.9.14+dfsg-1+b1) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgomp1-armhf-cross (12.2.0-1cross1) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up libasan8-armhf-cross (12.2.0-1cross1) ... Setting up gettext (0.21-9) ... Setting up libtool (2.4.7-4) ... Setting up libc6-dev-armhf-cross (2.34-3cross1) ... Setting up cpp-12-arm-linux-gnueabihf (12.2.0-1cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14-1) ... Setting up libgcc-12-dev-armhf-cross (12.2.0-1cross1) ... Setting up groff-base (1.22.4-8) ... Setting up cpp-arm-linux-gnueabihf (4:12.2.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.10.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-12-dev-armhf-cross (12.2.0-1cross1) ... Setting up gcc-12-arm-linux-gnueabihf (12.2.0-1cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabihf (4:12.2.0-1) ... Setting up g++-12-arm-linux-gnueabihf (12.2.0-1cross1) ... Setting up debhelper (13.9.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-arm-linux-gnueabihf (4:12.2.0-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-armhf (12.9) ... Setting up libgcc-s1:armhf (12.2.0-1) ... Setting up libc6:armhf (2.34-7) ... Setting up libstdc++6:armhf (12.2.0-1) ... Setting up libkeyutils1:armhf (1.6.3-1) ... Setting up libssl3:armhf (3.0.5-2) ... Setting up libcrypt1:armhf (1:4.4.28-2) ... Setting up libcom-err2:armhf (1.46.5-2) ... Setting up libgomp1:armhf (12.2.0-1) ... Setting up libasan6:armhf (11.3.0-5) ... Setting up libkrb5support0:armhf (1.20-1) ... Setting up libatomic1:armhf (12.2.0-1) ... Setting up libk5crypto3:armhf (1.20-1) ... Setting up libubsan1:armhf (12.2.0-1) ... Setting up libgcc-11-dev:armhf (11.3.0-5) ... Setting up libcrypt-dev:armhf (1:4.4.28-2) ... Setting up libkrb5-3:armhf (1.20-1) ... Setting up libgssapi-krb5-2:armhf (1.20-1) ... Setting up libtirpc3:armhf (1.3.3+ds-1) ... Setting up libtirpc-dev:armhf (1.3.3+ds-1) ... Setting up libnsl2:armhf (1.3.0-2) ... Setting up libnsl-dev:armhf (1.3.0-2) ... Setting up libc6-dev:armhf (2.34-7) ... Setting up libstdc++-11-dev:armhf (11.3.0-5) ... Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-15-amd64 #1 SMP Debian 5.10.120-1 (2022-06-09) amd64 (x86_64) Toolchain package versions: binutils_2.38.90.20220713-2 dpkg-dev_1.21.9 g++-11_11.3.0-5 g++-12_12.2.0-1 gcc-11_11.3.0-5 gcc-12_12.2.0-1 libc6-dev_2.34-7 libstdc++-11-dev_11.3.0-5 libstdc++-12-dev_12.2.0-1 libstdc++-12-dev-armhf-cross_12.2.0-1cross1 libstdc++6_12.2.0-1 libstdc++6-armhf-cross_12.2.0-1cross1 linux-libc-dev_5.19.6-1 Package versions: adduser_3.128 apt_2.5.2 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.6.0 bash_5.2~rc2-2 binutils_2.38.90.20220713-2 binutils-arm-linux-gnueabihf_2.38.90.20220713-2 binutils-common_2.38.90.20220713-2 binutils-x86-64-linux-gnu_2.38.90.20220713-2 bsdextrautils_2.38.1-1 bsdutils_1:2.38.1-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:12.2.0-1 cpp-11_11.3.0-5 cpp-12_12.2.0-1 cpp-12-arm-linux-gnueabihf_12.2.0-1cross1 cpp-arm-linux-gnueabihf_4:12.2.0-1 cross-config_2.6.18+nmu2 crossbuild-essential-armhf_12.9 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.9.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dpkg_1.21.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.9 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1 g++-11_11.3.0-5 g++-12_12.2.0-1 g++-12-arm-linux-gnueabihf_12.2.0-1cross1 g++-arm-linux-gnueabihf_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-5 gcc-11-base_11.3.0-5 gcc-12_12.2.0-1 gcc-12-arm-linux-gnueabihf_12.2.0-1cross1 gcc-12-arm-linux-gnueabihf-base_12.2.0-1cross1 gcc-12-base_12.2.0-1 gcc-12-cross-base_12.2.0-1cross1 gcc-9-base_9.5.0-2 gcc-arm-linux-gnueabihf_4:12.2.0-1 gettext_0.21-9 gettext-base_0.21-9 gpgv_2.2.35-3 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.5.2 libarchive-zip-perl_1.68-1 libasan6_11.3.0-5 libasan8_12.2.0-1 libasan8-armhf-cross_12.2.0-1cross1 libatomic1_12.2.0-1 libatomic1-armhf-cross_12.2.0-1cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbinutils_2.38.90.20220713-2 libblkid1_2.38.1-1 libbz2-1.0_1.0.8-5 libc-bin_2.34-7 libc-dev-bin_2.34-7 libc6_2.34-7 libc6-armhf-cross_2.34-3cross1 libc6-dev_2.34-7 libc6-dev-armhf-cross_2.34-3cross1 libcap-ng0_0.8.3-1+b1 libcap2_1:2.44-1 libcc1-0_12.2.0-1 libcom-err2_1.46.5-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.38.90.20220713-2 libctf0_2.38.90.20220713-2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.9.1 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.9 libelf1_0.187-2 libext2fs2_1.46.5-2 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.27-1 libgcc-11-dev_11.3.0-5 libgcc-12-dev_12.2.0-1 libgcc-12-dev-armhf-cross_12.2.0-1cross1 libgcc-s1_12.2.0-1 libgcc-s1-armhf-cross_12.2.0-1cross1 libgcrypt20_1.10.1-2 libgdbm-compat4_1.23-2 libgdbm6_1.23-2 libgmp10_2:6.2.1+dfsg1-1 libgnutls30_3.7.7-2 libgomp1_12.2.0-1 libgomp1-armhf-cross_12.2.0-1cross1 libgpg-error0_1.45-2 libgprofng0_2.38.90.20220713-2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu71_71.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-1 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 liblocale-gettext-perl_1.07-4+b2 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+------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: idba Binary: idba, idba-extra Architecture: any Version: 1.1.3-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/loneknightpy/idba Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/idba Vcs-Git: https://salsa.debian.org/med-team/idba.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), libgtest-dev , python3 Package-List: idba deb science optional arch=any idba-extra deb science optional arch=any Checksums-Sha1: cf673154a9696215648177f0bc43b9cc25feaf26 446227 idba_1.1.3.orig.tar.gz 359f30b05dc8923891739df705e636c461ad3e89 263052 idba_1.1.3-7.debian.tar.xz Checksums-Sha256: 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0 446227 idba_1.1.3.orig.tar.gz 540627574366ca2cbb36bed35fcc988d74418d95aae1b23676ecd73e6d632c84 263052 idba_1.1.3-7.debian.tar.xz Files: 41fe7eabdcfaea677558f3e4baeb2ea8 446227 idba_1.1.3.orig.tar.gz 2be67984af689e298100b910d25d62c1 263052 idba_1.1.3-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6angURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH+8g/8CQd9AFe9DX5WDeO5yieSGbai6F93dklW +tuwFC39afb11CbQS3VKFu6dDMS9vw4y2XpJq2qzFdR53rFisR7cH6nEbHF+c6fH utpqlpnsX2puEMenzlht34VPmj3jVyHOVQFtYc7Clou3Owoz8iGoslBijhensqZM +1r+uLQ/5GEMDHDAGxC8mIx7CebEVz6h9i8sbtvCsp6jJWkeFPQOFnA4dpI38x0R U84UL+Y1oP2m0gbS0BnguW9zT/EwoCqrpZuXwt2KKiQb72hSPAVeCwYhv/SXG2PI mB4LHEojeKaz5KtIwrMPre/DwbeLPhti5adT9bfoE2xIhw+UHgAIgO0S1VHZ4Nad nvJDyrL6s4s56bX9x4GvVb4hFS+m8HQAw8xEY0OvUwaQrfooXLkovG4YsYfawF97 QpuoCZZoW7lfh5Z+nD75aI1t9jAKawa/QPkIAp6M053DLR9l87XSzD3zzB+R0EfZ 4Bt+gl0M6hpPgcDQR57mU8IxQ3+rtOE/MlLaI6zEsyNhG6VZVyfgFbLlP5/InNDV sCKC8iaiI0qiCzZCe1n0kuNkXtXGkQa3qpd2eDb+RdNdncjTl/jn8NIx/mxsaqMQ vlnApAJdHAK95kjg4G/2Az8e5WsXhU+0RJzPVIhglc/PWA/BeFUijfVyP9YE9QiU LHcQuuxYruA= =ky3L -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.mvEhiCle/trustedkeys.kbx': General error gpgv: Signature made Sat Apr 18 06:28:21 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./idba_1.1.3-7.dsc dpkg-source: info: extracting idba in /<> dpkg-source: info: unpacking idba_1.1.3.orig.tar.gz dpkg-source: info: unpacking idba_1.1.3-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install_all_idba_flavours.patch dpkg-source: info: applying use-atomic-for-mips.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_debian_packaged_googletest.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-9f7cf409-3c32-4852-a33e-99b2811a776d SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package idba dpkg-buildpackage: info: source version 1.1.3-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:7: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:7: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:7: the top level configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from... configure.ac:8: the top level configure.ac:30: warning: AC_OUTPUT should be used without arguments. configure.ac:30: You should run autoupdate. configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:8: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation bin/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') bin/Makefile.am:9: warning: source file '$(top_srcdir)/src/tools/fa2fq.cpp' is in a subdirectory, bin/Makefile.am:9: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. bin/Makefile.am:19: warning: source file '$(top_srcdir)/src/tools/filter_blat.cpp' is in a subdirectory, bin/Makefile.am:19: but option 'subdir-objects' is disabled bin/Makefile.am:17: warning: source file '$(top_srcdir)/src/tools/filter_contigs.cpp' is in a subdirectory, bin/Makefile.am:17: but option 'subdir-objects' is disabled bin/Makefile.am:33: warning: source file '$(top_srcdir)/src/release/filterfa.cpp' is in a subdirectory, bin/Makefile.am:33: but option 'subdir-objects' is disabled bin/Makefile.am:25: warning: source file '$(top_srcdir)/src/release/fq2fa.cpp' is in a subdirectory, bin/Makefile.am:25: but option 'subdir-objects' is disabled bin/Makefile.am:34: warning: source file '$(top_srcdir)/src/release/idba.cpp' is in a subdirectory, bin/Makefile.am:34: but option 'subdir-objects' is disabled bin/Makefile.am:30: warning: source file '$(top_srcdir)/src/release/idba_hybrid.cpp' is in a subdirectory, bin/Makefile.am:30: but option 'subdir-objects' is disabled bin/Makefile.am:29: warning: source file '$(top_srcdir)/src/release/idba_tran.cpp' is in a subdirectory, bin/Makefile.am:29: but option 'subdir-objects' is disabled bin/Makefile.am:13: warning: source file '$(top_srcdir)/src/tools/idba_tran_test.cpp' is in a subdirectory, bin/Makefile.am:13: but option 'subdir-objects' is disabled bin/Makefile.am:27: warning: source file '$(top_srcdir)/src/release/idba_ud.cpp' is in a subdirectory, bin/Makefile.am:27: but option 'subdir-objects' is disabled bin/Makefile.am:31: warning: source file '$(top_srcdir)/src/release/parallel_blat.cpp' is in a subdirectory, bin/Makefile.am:31: but option 'subdir-objects' is disabled bin/Makefile.am:18: warning: source file '$(top_srcdir)/src/tools/parallel_rna_blat.cpp' is in a subdirectory, bin/Makefile.am:18: but option 'subdir-objects' is disabled bin/Makefile.am:12: warning: source file '$(top_srcdir)/src/tools/print_graph.cpp' is in a subdirectory, bin/Makefile.am:12: but option 'subdir-objects' is disabled bin/Makefile.am:28: warning: source file '$(top_srcdir)/src/release/raw_n50.cpp' is in a subdirectory, bin/Makefile.am:28: but option 'subdir-objects' is disabled bin/Makefile.am:14: warning: source file '$(top_srcdir)/src/tools/sample_reads.cpp' is in a subdirectory, bin/Makefile.am:14: but option 'subdir-objects' is disabled bin/Makefile.am:7: warning: source file '$(top_srcdir)/src/tools/scaffold.cpp' is in a subdirectory, bin/Makefile.am:7: but option 'subdir-objects' is disabled bin/Makefile.am:6: warning: source file '$(top_srcdir)/src/tools/shuffle_reads.cpp' is in a subdirectory, bin/Makefile.am:6: but option 'subdir-objects' is disabled bin/Makefile.am:36: warning: source file '$(top_srcdir)/src/release/sim_reads.cpp' is in a subdirectory, bin/Makefile.am:36: but option 'subdir-objects' is disabled bin/Makefile.am:32: warning: source file '$(top_srcdir)/src/release/sim_reads_tran.cpp' is in a subdirectory, bin/Makefile.am:32: but option 'subdir-objects' is disabled bin/Makefile.am:15: warning: source file '$(top_srcdir)/src/tools/sort_psl.cpp' is in a subdirectory, bin/Makefile.am:15: but option 'subdir-objects' is disabled bin/Makefile.am:16: warning: source file '$(top_srcdir)/src/tools/sort_reads.cpp' is in a subdirectory, bin/Makefile.am:16: but option 'subdir-objects' is disabled bin/Makefile.am:20: warning: source file '$(top_srcdir)/src/tools/split_fa.cpp' is in a subdirectory, bin/Makefile.am:20: but option 'subdir-objects' is disabled bin/Makefile.am:23: warning: source file '$(top_srcdir)/src/tools/split_fq.cpp' is in a subdirectory, bin/Makefile.am:23: but option 'subdir-objects' is disabled bin/Makefile.am:35: warning: source file '$(top_srcdir)/src/release/split_scaffold.cpp' is in a subdirectory, bin/Makefile.am:35: but option 'subdir-objects' is disabled bin/Makefile.am:21: warning: source file '$(top_srcdir)/src/tools/test.cpp' is in a subdirectory, bin/Makefile.am:21: but option 'subdir-objects' is disabled bin/Makefile.am:8: warning: source file '$(top_srcdir)/src/tools/validate_component.cpp' is in a subdirectory, bin/Makefile.am:8: but option 'subdir-objects' is disabled bin/Makefile.am:26: warning: source file '$(top_srcdir)/src/release/validate_contigs_blat.cpp' is in a subdirectory, bin/Makefile.am:26: but option 'subdir-objects' is disabled bin/Makefile.am:11: warning: source file '$(top_srcdir)/src/tools/validate_contigs_mummer.cpp' is in a subdirectory, bin/Makefile.am:11: but option 'subdir-objects' is disabled bin/Makefile.am:22: warning: source file '$(top_srcdir)/src/tools/validate_reads_blat.cpp' is in a subdirectory, bin/Makefile.am:22: but option 'subdir-objects' is disabled bin/Makefile.am:10: warning: source file '$(top_srcdir)/src/tools/validate_rna.cpp' is in a subdirectory, bin/Makefile.am:10: but option 'subdir-objects' is disabled lib/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/basic/math.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/hash_aligner.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/options_description.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/log.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/utils.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/blat_record.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/short_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_reader.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_writer.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_io.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/compact_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/scaffold_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_info.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/local_assembler.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/assembly_utility.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest-all.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled test/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') test/Makefile.am:11: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:11: warning: source file '$(top_srcdir)/src/test/atomic_integer_unittest.cpp' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/src/test/bit_edges_unittest.cpp' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/src/test/compact_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/src/test/hash_map_unittest.cpp' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/src/test/hash_set_unittest.cpp' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/src/test/hash_table_unittest.cpp' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/src/test/histgram_unittest.cpp' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/src/test/kmer_unittest.cpp' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/src/test/managed_list_unittest.cpp' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/src/test/sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/src/test/short_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/src/test/vertex_status_unittest.cpp' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- LDFLAGS="-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" LIBS=" -latomic" ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabihf "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" "LIBS= -latomic" configure: loading site script /etc/dpkg-cross/cross-config.armhf checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabihf-strip... arm-linux-gnueabihf-strip checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabihf-g++... arm-linux-gnueabihf-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether arm-linux-gnueabihf-g++ accepts -g... yes checking for arm-linux-gnueabihf-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabihf-g++... none checking for arm-linux-gnueabihf-gcc... arm-linux-gnueabihf-gcc checking whether the compiler supports GNU C... yes checking whether arm-linux-gnueabihf-gcc accepts -g... yes checking for arm-linux-gnueabihf-gcc option to enable C11 features... none needed checking whether arm-linux-gnueabihf-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabihf-gcc... none checking for arm-linux-gnueabihf-ranlib... arm-linux-gnueabihf-ranlib checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for an ANSI C-conforming const... yes checking for working memcmp... no checking for vprintf... yes checking for sqrt... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating bin/Makefile config.status: creating lib/Makefile config.status: creating test/Makefile config.status: creating script/Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in lib make[3]: Entering directory '/<>/lib' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o math.o `test -f '../src/basic/math.cpp' || echo './'`../src/basic/math.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:60, from /usr/arm-linux-gnueabihf/include/c++/12/algorithm:61, from ../src/basic/math.cpp:3: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1802 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1908 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from ../src/basic/math.h:13, from ../src/basic/math.cpp:1: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1294:21, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:40:31: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:41:9: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:41:9: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_aligner.o `test -f '../src/misc/hash_aligner.cpp' || echo './'`../src/misc/hash_aligner.cpp In file included from ../src/container/hash_map.h:14, from ../src/misc/hash_aligner.h:14, from ../src/misc/hash_aligner.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/functional:49, from ../src/basic/functional.h:13, from ../src/container/hash_map.h:13: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o options_description.o `test -f '../src/misc/options_description.cpp' || echo './'`../src/misc/options_description.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o log.o `test -f '../src/misc/log.cpp' || echo './'`../src/misc/log.cpp ../src/misc/log.cpp: In destructor ‘LogProcess::~LogProcess()’: ../src/misc/log.cpp:78:13: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 78 | throw runtime_error("cannot kill log process"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../src/misc/log.cpp:78:13: note: in C++11 destructors default to ‘noexcept’ ../src/misc/log.cpp: In static member function ‘static void* LogThread::LogThreadFunc(void*)’: ../src/misc/log.cpp:122:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 122 | write(log_thread.out_fd, line, len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.o `test -f '../src/misc/utils.cpp' || echo './'`../src/misc/utils.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blat_record.o `test -f '../src/misc/blat_record.cpp' || echo './'`../src/misc/blat_record.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o short_sequence.o `test -f '../src/sequence/short_sequence.cpp' || echo './'`../src/sequence/short_sequence.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_reader.o `test -f '../src/sequence/sequence_reader.cpp' || echo './'`../src/sequence/sequence_reader.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_writer.o `test -f '../src/sequence/sequence_writer.cpp' || echo './'`../src/sequence/sequence_writer.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_io.o `test -f '../src/sequence/sequence_io.cpp' || echo './'`../src/sequence/sequence_io.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence.o `test -f '../src/sequence/sequence.cpp' || echo './'`../src/sequence/sequence.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compact_sequence.o `test -f '../src/sequence/compact_sequence.cpp' || echo './'`../src/sequence/compact_sequence.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph_branch_group.o `test -f '../src/graph/contig_graph_branch_group.cpp' || echo './'`../src/graph/contig_graph_branch_group.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/contig_graph_branch_group.h:15, from ../src/graph/contig_graph_branch_group.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/vector:66, from ../src/graph/contig_graph_branch_group.h:13: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph.o `test -f '../src/graph/hash_graph.cpp' || echo './'`../src/graph/hash_graph.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/graph/hash_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/graph/hash_graph.h:15: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold_graph.o `test -f '../src/graph/scaffold_graph.cpp' || echo './'`../src/graph/scaffold_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/scaffold_graph.h:19, from ../src/graph/scaffold_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/string:48, from /usr/arm-linux-gnueabihf/include/c++/12/bits/locale_classes.h:40, from /usr/arm-linux-gnueabihf/include/c++/12/bits/ios_base.h:41, from /usr/arm-linux-gnueabihf/include/c++/12/ios:42, from /usr/arm-linux-gnueabihf/include/c++/12/ostream:38, from /usr/arm-linux-gnueabihf/include/c++/12/iostream:39, from ../src/graph/scaffold_graph.h:14: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph.o `test -f '../src/graph/contig_graph.cpp' || echo './'`../src/graph/contig_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/contig_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/graph/contig_graph.h:14: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/graph/contig_graph.cpp: In member function ‘void ContigGraph::TopSort(std::deque&, std::deque&)’: ../src/graph/contig_graph.cpp:1391:30: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 1391 | ContigGraphVertexAdaptor end = GetEndVertexAdaptor(component); | ^~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph_branch_group.o `test -f '../src/graph/hash_graph_branch_group.cpp' || echo './'`../src/graph/hash_graph_branch_group.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/graph/hash_graph_branch_group.h:14, from ../src/graph/hash_graph_branch_group.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/graph/hash_graph.h:15: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_info.o `test -f '../src/graph/contig_info.cpp' || echo './'`../src/graph/contig_info.cpp arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o local_assembler.o `test -f '../src/assembly/local_assembler.cpp' || echo './'`../src/assembly/local_assembler.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/assembly/local_assembler.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/assembly/assembly_utility.h:17, from ../src/assembly/local_assembler.h:13: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/assembly/local_assembler.cpp: In static member function ‘static void* LocalAssemblerWithReference::LocalAssembleThread(void*)’: ../src/assembly/local_assembler.cpp:488:22: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 488 | bool flag = false; | ^~~~ ../src/assembly/local_assembler.cpp:489:21: warning: variable ‘aligned’ set but not used [-Wunused-but-set-variable] 489 | int aligned[2] = {0}; | ^~~~~~~ arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assembly_utility.o `test -f '../src/assembly/assembly_utility.cpp' || echo './'`../src/assembly/assembly_utility.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/assembly/assembly_utility.cpp:14: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/assembly/assembly_utility.h:17, from ../src/assembly/assembly_utility.cpp:9: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ rm -f libassembly.a ar cru libassembly.a math.o hash_aligner.o options_description.o log.o utils.o blat_record.o short_sequence.o sequence_reader.o sequence_writer.o sequence_io.o sequence.o compact_sequence.o contig_graph_branch_group.o hash_graph.o scaffold_graph.o contig_graph.o hash_graph_branch_group.o contig_info.o local_assembler.o assembly_utility.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabihf-ranlib libassembly.a arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest_main.o `test -f '../gtest_src/gtest/gtest_main.cc' || echo './'`../gtest_src/gtest/gtest_main.cc arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest-all.o `test -f '../gtest_src/gtest/gtest-all.cc' || echo './'`../gtest_src/gtest/gtest-all.cc In file included from ../gtest_src/gtest/gtest-all.cc:39: ../gtest_src/gtest/gtest.h: In static member function ‘static const char* testing::internal::String::CloneCString(const char*)’: ../gtest_src/gtest/gtest.h:2672:17: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 2672 | return strncpy(dest, src, n); | ^ ../gtest_src/gtest/gtest-all.cc:2155:39: note: length computed here 2155 | NULL : CloneString(c_str, strlen(c_str)); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ rm -f libgtest.a ar cru libgtest.a gtest_main.o gtest-all.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabihf-ranlib libgtest.a make[3]: Leaving directory '/<>/lib' Making all in bin make[3]: Entering directory '/<>/bin' arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba.o `test -f '../src/release/idba.cpp' || echo './'`../src/release/idba.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/release/idba.cpp:23: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/release/idba.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba idba.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_ud.o `test -f '../src/release/idba_ud.cpp' || echo './'`../src/release/idba_ud.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_ud.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/release/idba_ud.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_ud idba_ud.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran.o `test -f '../src/release/idba_tran.cpp' || echo './'`../src/release/idba_tran.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_tran.cpp:22: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/release/idba_tran.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void FindIsoforms(ContigGraphPath&, std::deque&, ContigGraph&, std::deque&)’: ../src/release/idba_tran.cpp:241:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 241 | if (flag && path.size() > option.min_transcript) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void Assemble(HashGraph&)’: ../src/release/idba_tran.cpp:523:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 523 | if (transcripts[i].size() >= option.min_transcript) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran idba_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_hybrid.o `test -f '../src/release/idba_hybrid.cpp' || echo './'`../src/release/idba_hybrid.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_hybrid.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/release/idba_hybrid.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_hybrid idba_hybrid.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle_reads.o `test -f '../src/tools/shuffle_reads.cpp' || echo './'`../src/tools/shuffle_reads.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o shuffle_reads shuffle_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold.o `test -f '../src/tools/scaffold.cpp' || echo './'`../src/tools/scaffold.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/tools/scaffold.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/tools/scaffold.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o scaffold scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_component.o `test -f '../src/tools/validate_component.cpp' || echo './'`../src/tools/validate_component.cpp ../src/tools/validate_component.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_component.cpp:141:13: warning: unused variable ‘ref_id’ [-Wunused-variable] 141 | int ref_id = dict[record.ref_name]; | ^~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_component validate_component.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fa2fq.o `test -f '../src/tools/fa2fq.cpp' || echo './'`../src/tools/fa2fq.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fa2fq fa2fq.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_rna.o `test -f '../src/tools/validate_rna.cpp' || echo './'`../src/tools/validate_rna.cpp ../src/tools/validate_rna.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_rna.cpp:396:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 396 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_rna validate_rna.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_mummer.o `test -f '../src/tools/validate_contigs_mummer.cpp' || echo './'`../src/tools/validate_contigs_mummer.cpp ../src/tools/validate_contigs_mummer.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_contigs_mummer.cpp:218:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 218 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:219:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 219 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:220:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 220 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:221:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 221 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:222:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 222 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_mummer validate_contigs_mummer.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_graph.o `test -f '../src/tools/print_graph.cpp' || echo './'`../src/tools/print_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/tools/print_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/graph/contig_graph.h:14: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o print_graph print_graph.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran_test.o `test -f '../src/tools/idba_tran_test.cpp' || echo './'`../src/tools/idba_tran_test.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/tools/idba_tran_test.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabihf/include/c++/12/deque:65, from ../src/tools/idba_tran_test.cpp:11: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran_test idba_tran_test.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sample_reads.o `test -f '../src/tools/sample_reads.cpp' || echo './'`../src/tools/sample_reads.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sample_reads sample_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_psl.o `test -f '../src/tools/sort_psl.cpp' || echo './'`../src/tools/sort_psl.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_psl sort_psl.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_reads.o `test -f '../src/tools/sort_reads.cpp' || echo './'`../src/tools/sort_reads.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_reads sort_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_contigs.o `test -f '../src/tools/filter_contigs.cpp' || echo './'`../src/tools/filter_contigs.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_contigs filter_contigs.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_rna_blat.o `test -f '../src/tools/parallel_rna_blat.cpp' || echo './'`../src/tools/parallel_rna_blat.cpp ../src/tools/parallel_rna_blat.cpp: In function ‘void CreateFile(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RemoveFile(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void Append(const std::string&, const std::string&)’: ../src/tools/parallel_rna_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RunBlat(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_rna_blat parallel_rna_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_blat.o `test -f '../src/tools/filter_blat.cpp' || echo './'`../src/tools/filter_blat.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_blat filter_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fa.o `test -f '../src/tools/split_fa.cpp' || echo './'`../src/tools/split_fa.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fa split_fa.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test.o `test -f '../src/tools/test.cpp' || echo './'`../src/tools/test.cpp ../src/tools/test.cpp:6:32: warning: extra tokens at end of #include directive 6 | #include "graph/contig_graph.h"; | ^ ../src/tools/test.cpp:7:31: warning: extra tokens at end of #include directive 7 | #include "sequence/sequence.h"; | ^ In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/tools/test.cpp:6: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/string:48, from /usr/arm-linux-gnueabihf/include/c++/12/bits/locale_classes.h:40, from /usr/arm-linux-gnueabihf/include/c++/12/bits/ios_base.h:41, from /usr/arm-linux-gnueabihf/include/c++/12/ios:42, from /usr/arm-linux-gnueabihf/include/c++/12/ostream:38, from /usr/arm-linux-gnueabihf/include/c++/12/iostream:39, from ../src/tools/test.cpp:1: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o test test.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_reads_blat.o `test -f '../src/tools/validate_reads_blat.cpp' || echo './'`../src/tools/validate_reads_blat.cpp In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:70, from ../src/tools/validate_reads_blat.cpp:16: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabihf/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 523 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, char**)’ at ../src/tools/validate_reads_blat.cpp:71:24: /usr/arm-linux-gnueabihf/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1032 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_reads_blat validate_reads_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fq.o `test -f '../src/tools/split_fq.cpp' || echo './'`../src/tools/split_fq.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fq split_fq.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fq2fa.o `test -f '../src/release/fq2fa.cpp' || echo './'`../src/release/fq2fa.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fq2fa fq2fa.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_blat.o `test -f '../src/release/validate_contigs_blat.cpp' || echo './'`../src/release/validate_contigs_blat.cpp ../src/release/validate_contigs_blat.cpp: In function ‘int main(int, char**)’: ../src/release/validate_contigs_blat.cpp:388:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 388 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_blat validate_contigs_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o raw_n50.o `test -f '../src/release/raw_n50.cpp' || echo './'`../src/release/raw_n50.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o raw_n50 raw_n50.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_blat.o `test -f '../src/release/parallel_blat.cpp' || echo './'`../src/release/parallel_blat.cpp ../src/release/parallel_blat.cpp: In function ‘void CreateFile(const std::string&)’: ../src/release/parallel_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RemoveFile(const std::string&)’: ../src/release/parallel_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void Append(const std::string&, const std::string&)’: ../src/release/parallel_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RunBlat(const std::string&)’: ../src/release/parallel_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_blat parallel_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads_tran.o `test -f '../src/release/sim_reads_tran.cpp' || echo './'`../src/release/sim_reads_tran.cpp ../src/release/sim_reads_tran.cpp: In function ‘int main(int, char**)’: ../src/release/sim_reads_tran.cpp:89:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 89 | fscanf(flist, "%s %lf", buf, &weight[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads_tran sim_reads_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filterfa.o `test -f '../src/release/filterfa.cpp' || echo './'`../src/release/filterfa.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filterfa filterfa.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_scaffold.o `test -f '../src/release/split_scaffold.cpp' || echo './'`../src/release/split_scaffold.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_scaffold split_scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabihf-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads.o `test -f '../src/release/sim_reads.cpp' || echo './'`../src/release/sim_reads.cpp arm-linux-gnueabihf-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads sim_reads.o ../lib/libassembly.a -latomic make[3]: Leaving directory '/<>/bin' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' Making all in script make[3]: Entering directory '/<>/script' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/script' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in bin make[2]: Entering directory '/<>/bin' make[3]: Entering directory '/<>/bin' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c idba idba_ud idba_tran idba_hybrid '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/bin' make[2]: Leaving directory '/<>/bin' Making install in test make[2]: Entering directory '/<>/test' make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>/test' Making install in script make[2]: Entering directory '/<>/script' make[3]: Entering directory '/<>/script' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c scan.py run-unittest.py validate_blat validate_blat_parallel '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/script' make[2]: Leaving directory '/<>/script' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # for the moment the role of these scripts is totally unknown but they do not seem to be necessary mv debian/idba/usr/bin/*.py debian/idba/usr/lib/idba/ mv debian/idba/usr/bin/validate_blat* debian/idba/usr/lib/idba/ make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/bin/run-unittest.py exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: idba (7), idba-extra (23) * dh_installdocs: idba (0), idba-extra (0) * dh_installexamples: idba (5), idba-extra (0) * dh_installman: idba (4), idba-extra (5) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_hybrid contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_ud contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fa2fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/print_graph contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_contigs contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_mummer contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_psl contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_reads_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/raw_n50 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sample_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_rna_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fq2fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_component contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/shuffle_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_rna contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'idba' in '../idba_1.1.3-7_armhf.deb'. dpkg-deb: building package 'idba-dbgsym' in '../idba-dbgsym_1.1.3-7_armhf.deb'. dpkg-deb: building package 'idba-extra' in '../idba-extra_1.1.3-7_armhf.deb'. dpkg-deb: building package 'idba-extra-dbgsym' in '../idba-extra-dbgsym_1.1.3-7_armhf.deb'. dpkg-genbuildinfo --build=any -O../idba_1.1.3-7_armhf.buildinfo dpkg-genchanges --build=any -O../idba_1.1.3-7_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-09-05T12:07:11Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ idba_1.1.3-7_armhf.changes: --------------------------- Format: 1.8 Date: Sat, 18 Apr 2020 08:20:19 +0200 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Built-For-Profiles: cross nocheck Architecture: armhf Version: 1.1.3-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: idba - iterative De Bruijn Graph short read assemblers idba-extra - iterative De Bruijn Graph short read assemblers (extra tools) Changes: idba (1.1.3-7) unstable; urgency=medium . * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 0f95b0e2e1ea0985d26037a319dcfc3c3c6d7914 9937884 idba-dbgsym_1.1.3-7_armhf.deb e29de30bf3ff29fd7a43863091780f9aea88d11f 8034432 idba-extra-dbgsym_1.1.3-7_armhf.deb ad58046aa5a9ec75995e77fc1dd27f9bfd229dae 326980 idba-extra_1.1.3-7_armhf.deb fd595d0483eddfa8be8963f8b6b2a231f2852559 5649 idba_1.1.3-7_armhf.buildinfo 4fe8210612ba142471aecbb575a07d17d94a9421 589616 idba_1.1.3-7_armhf.deb Checksums-Sha256: 2043ea1d486a8935e5bc80b6070a38a46d9e27a13e218b33ecf3e3a0abf7e2b1 9937884 idba-dbgsym_1.1.3-7_armhf.deb ef398365e7701f923e067a83cd0bb297c221b59466f69c5febdc564b6adce179 8034432 idba-extra-dbgsym_1.1.3-7_armhf.deb 6d7ceb80c5985e05efaa7b79704f95735087d47247e0b6ef615a8eb61fdbbf39 326980 idba-extra_1.1.3-7_armhf.deb 68f769d45dde3e8970e9ed3bf09a77d8ae67c3cf4fb0c73c4009f4812884a847 5649 idba_1.1.3-7_armhf.buildinfo 3ae0c56fa7060b06d24dc9357f6e3fe5756e8445f9297fb811c26ac199ee1102 589616 idba_1.1.3-7_armhf.deb Files: 1b7966187c55770ef92ab6058587bd90 9937884 debug optional idba-dbgsym_1.1.3-7_armhf.deb 9688348989af2c8bea15f59125dcde01 8034432 debug optional idba-extra-dbgsym_1.1.3-7_armhf.deb be5c9480b9a14aee6d548c0adf749084 326980 science optional idba-extra_1.1.3-7_armhf.deb 407d476ad42f194a5727a0e0553a0522 5649 science optional idba_1.1.3-7_armhf.buildinfo 4f4514c0f52a7fe21ef012e5ea024da7 589616 science optional idba_1.1.3-7_armhf.deb /<>/idba_1.1.3-7_armhf.changes.new could not be renamed to /<>/idba_1.1.3-7_armhf.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Architecture: armhf Version: 1.1.3-7 Checksums-Md5: 1b7966187c55770ef92ab6058587bd90 9937884 idba-dbgsym_1.1.3-7_armhf.deb 9688348989af2c8bea15f59125dcde01 8034432 idba-extra-dbgsym_1.1.3-7_armhf.deb be5c9480b9a14aee6d548c0adf749084 326980 idba-extra_1.1.3-7_armhf.deb 4f4514c0f52a7fe21ef012e5ea024da7 589616 idba_1.1.3-7_armhf.deb Checksums-Sha1: 0f95b0e2e1ea0985d26037a319dcfc3c3c6d7914 9937884 idba-dbgsym_1.1.3-7_armhf.deb e29de30bf3ff29fd7a43863091780f9aea88d11f 8034432 idba-extra-dbgsym_1.1.3-7_armhf.deb ad58046aa5a9ec75995e77fc1dd27f9bfd229dae 326980 idba-extra_1.1.3-7_armhf.deb 4fe8210612ba142471aecbb575a07d17d94a9421 589616 idba_1.1.3-7_armhf.deb Checksums-Sha256: 2043ea1d486a8935e5bc80b6070a38a46d9e27a13e218b33ecf3e3a0abf7e2b1 9937884 idba-dbgsym_1.1.3-7_armhf.deb ef398365e7701f923e067a83cd0bb297c221b59466f69c5febdc564b6adce179 8034432 idba-extra-dbgsym_1.1.3-7_armhf.deb 6d7ceb80c5985e05efaa7b79704f95735087d47247e0b6ef615a8eb61fdbbf39 326980 idba-extra_1.1.3-7_armhf.deb 3ae0c56fa7060b06d24dc9357f6e3fe5756e8445f9297fb811c26ac199ee1102 589616 idba_1.1.3-7_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 05 Sep 2022 12:07:11 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-9), autotools-dev (= 20220109.1), base-files (= 12.2), base-passwd (= 3.6.0), bash (= 5.2~rc2-2), binutils (= 2.38.90.20220713-2), binutils-common (= 2.38.90.20220713-2), binutils-x86-64-linux-gnu (= 2.38.90.20220713-2), bsdextrautils (= 2.38.1-1), bsdutils (= 1:2.38.1-1), build-essential (= 12.9), bzip2 (= 1.0.8-5), coreutils (= 8.32-4.1), cpp (= 4:12.2.0-1), cpp-11 (= 11.3.0-5), cpp-12 (= 12.2.0-1), dash (= 0.5.11+git20210903+057cd650a4ed-9), debconf (= 1.5.79), debhelper (= 13.9.1), debianutils (= 5.7-0.3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dpkg (= 1.21.9), dpkg-dev (= 1.21.9), dwz (= 0.14-1), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:12.2.0-1), g++-12 (= 12.2.0-1), gcc (= 4:12.2.0-1), gcc-11 (= 11.3.0-5), gcc-11-base (= 11.3.0-5), gcc-12 (= 12.2.0-1), gcc-12-base (= 12.2.0-1), gettext (= 0.21-9), gettext-base (= 0.21-9), grep (= 3.7-1), groff-base (= 1.22.4-8), gzip (= 1.12-1), hostname (= 3.23), init-system-helpers (= 1.64), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-5), libasan8 (= 12.2.0-1), libatomic1 (= 12.2.0-1), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1), libaudit1 (= 1:3.0.7-1+b1), libbinutils (= 2.38.90.20220713-2), libblkid1 (= 2.38.1-1), libbz2-1.0 (= 1.0.8-5), libc-bin (= 2.34-7), libc-dev-bin (= 2.34-7), libc6 (= 2.34-7), libc6-dev (= 2.34-7), libcap-ng0 (= 0.8.3-1+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 12.2.0-1), libcom-err2 (= 1.46.5-2), libcrypt-dev (= 1:4.4.28-2), libcrypt1 (= 1:4.4.28-2), libctf-nobfd0 (= 2.38.90.20220713-2), libctf0 (= 2.38.90.20220713-2), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264), libdebhelper-perl (= 13.9.1), libdpkg-perl (= 1.21.9), libelf1 (= 0.187-2), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.3.0-5), libgcc-12-dev (= 12.2.0-1), libgcc-s1 (= 12.2.0-1), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-2), libgdbm6 (= 1.23-2), libgmp10 (= 2:6.2.1+dfsg1-1), libgomp1 (= 12.2.0-1), libgpg-error0 (= 1.45-2), libgprofng0 (= 2.38.90.20220713-2), libgssapi-krb5-2 (= 1.20-1), libicu71 (= 71.1-3), libisl23 (= 0.25-1), libitm1 (= 12.2.0-1), libk5crypto3 (= 1.20-1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1), libkrb5support0 (= 1.20-1), liblsan0 (= 12.2.0-1), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38.1-1), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.5.2-2), libpam-modules-bin (= 1.5.2-2), libpam-runtime (= 1.5.2-2), libpam0g (= 1.5.2-2), libpcre2-8-0 (= 10.40-1), libpcre3 (= 2:8.39-14), libperl5.34 (= 5.34.0-5), libpipeline1 (= 1.5.6-2), libquadmath0 (= 12.2.0-1), libseccomp2 (= 2.5.4-1+b1), libselinux1 (= 3.4-1+b1), libsmartcols1 (= 2.38.1-1), libssl3 (= 3.0.5-2), libstdc++-12-dev (= 12.2.0-1), libstdc++6 (= 12.2.0-1), libsub-override-perl (= 0.09-3), libsystemd0 (= 251.4-3), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-5), libtsan2 (= 12.2.0-1), libubsan1 (= 12.2.0-1), libuchardet0 (= 0.0.7-1), libudev1 (= 251.4-3), libunistring2 (= 1.0-1), libuuid1 (= 2.38.1-1), libxml2 (= 2.9.14+dfsg-1+b1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 5.19.6-1), login (= 1:4.11.1+dfsg1-2), lsb-base (= 11.2), m4 (= 1.4.19-1), make (= 4.3-4.1), man-db (= 2.10.2-3), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.34.0-5), perl-base (= 5.34.0-5), perl-modules-5.34 (= 5.34.0-5), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.04-1), tar (= 1.34+dfsg-1), util-linux (= 2.38.1-1), util-linux-extra (= 2.38.1-1), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1587190819" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ idba-dbgsym_1.1.3-7_armhf.deb ----------------------------- new Debian package, version 2.0. size 9937884 bytes: control archive=740 bytes. 483 bytes, 12 lines control 508 bytes, 5 lines md5sums Package: idba-dbgsym Source: idba Version: 1.1.3-7 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 10177 Depends: idba (= 1.1.3-7) Section: debug Priority: optional Description: debug symbols for idba Build-Ids: 330945a61e8380db822863adfd0d79f4709d3636 4b4234339dc0726a9a172c356960b7d172e444cc 4fb32eba198049bcaeb06f7bd0e7c5a9f32d5ed3 bb4cbab409cb4593d30ffcb638ecdb8cd3e707b5 drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/33/ -rw-r--r-- root/root 2010196 2020-04-18 06:20 ./usr/lib/debug/.build-id/33/0945a61e8380db822863adfd0d79f4709d3636.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/4b/ -rw-r--r-- root/root 2296868 2020-04-18 06:20 ./usr/lib/debug/.build-id/4b/4234339dc0726a9a172c356960b7d172e444cc.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/4f/ -rw-r--r-- root/root 2395532 2020-04-18 06:20 ./usr/lib/debug/.build-id/4f/b32eba198049bcaeb06f7bd0e7c5a9f32d5ed3.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/bb/ -rw-r--r-- root/root 2312112 2020-04-18 06:20 ./usr/lib/debug/.build-id/bb/4cbab409cb4593d30ffcb638ecdb8cd3e707b5.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/ -rw-r--r-- root/root 1388196 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/idba.debug drwxr-xr-x root/root 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./usr/lib/debug/.build-id/f6/ -rw-r--r-- root/root 239160 2020-04-18 06:20 ./usr/lib/debug/.build-id/f6/af83929132fbfc1d855bf9911a435c8a3f0f11.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/ -rw-r--r-- root/root 705276 2020-04-18 06:20 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/idba-extra.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra-dbgsym -> idba-extra idba-extra_1.1.3-7_armhf.deb ---------------------------- new Debian package, version 2.0. size 326980 bytes: control archive=1876 bytes. 1472 bytes, 30 lines control 1765 bytes, 30 lines md5sums Package: idba-extra Source: idba Version: 1.1.3-7 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1960 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 11), python3, idba Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers (extra tools) IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. . This package ships extra tools for using idba in specific situations. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/fa2fq -rwxr-xr-x root/root 67164 2020-04-18 06:20 ./usr/bin/filter_blat -rwxr-xr-x root/root 67224 2020-04-18 06:20 ./usr/bin/filter_contigs -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/fq2fa -rwxr-xr-x root/root 67228 2020-04-18 06:20 ./usr/bin/parallel_blat -rwxr-xr-x root/root 67228 2020-04-18 06:20 ./usr/bin/parallel_rna_blat -rwxr-xr-x root/root 198328 2020-04-18 06:20 ./usr/bin/print_graph -rwxr-xr-x root/root 67224 2020-04-18 06:20 ./usr/bin/raw_n50 -rwxr-xr-x root/root 67252 2020-04-18 06:20 ./usr/bin/sample_reads -rwxr-xr-x root/root 369404 2020-04-18 06:20 ./usr/bin/scaffold -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/shuffle_reads -rwxr-xr-x root/root 67252 2020-04-18 06:20 ./usr/bin/sim_reads -rwxr-xr-x root/root 67252 2020-04-18 06:20 ./usr/bin/sim_reads_tran -rwxr-xr-x root/root 67164 2020-04-18 06:20 ./usr/bin/sort_psl -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/sort_reads -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/split_fa -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/split_fq -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/split_scaffold -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/validate_component -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/validate_contigs_blat -rwxr-xr-x root/root 67252 2020-04-18 06:20 ./usr/bin/validate_contigs_mummer -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/validate_reads_blat -rwxr-xr-x root/root 67220 2020-04-18 06:20 ./usr/bin/validate_rna drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba-extra/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba-extra/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 416 2020-04-18 06:20 ./usr/share/man/man1/filter_blat.1.gz -rw-r--r-- root/root 438 2020-04-18 06:20 ./usr/share/man/man1/filter_contigs.1.gz -rw-r--r-- root/root 426 2020-04-18 06:20 ./usr/share/man/man1/fq2fa.1.gz -rw-r--r-- root/root 483 2020-04-18 06:20 ./usr/share/man/man1/sim_reads.1.gz -rw-r--r-- root/root 460 2020-04-18 06:20 ./usr/share/man/man1/sim_reads_tran.1.gz idba_1.1.3-7_armhf.deb ---------------------- new Debian package, version 2.0. size 589616 bytes: control archive=1692 bytes. 1359 bytes, 27 lines control 1599 bytes, 23 lines md5sums Package: idba Version: 1.1.3-7 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 3090 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 11), python3 Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 369400 2020-04-18 06:20 ./usr/bin/idba -rwxr-xr-x root/root 434936 2020-04-18 06:20 ./usr/bin/idba_hybrid -rwxr-xr-x root/root 394940 2020-04-18 06:20 ./usr/bin/idba_tran -rwxr-xr-x root/root 434936 2020-04-18 06:20 ./usr/bin/idba_ud drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/idba/ -rwxr-xr-x root/root 4144 2020-04-18 06:20 ./usr/lib/idba/scan.py -rwxr-xr-x root/root 301 2020-04-18 06:20 ./usr/lib/idba/validate_blat -rwxr-xr-x root/root 223 2020-04-18 06:20 ./usr/lib/idba/validate_blat_parallel drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ -rw-r--r-- root/root 1015 2020-04-18 06:20 ./usr/share/doc/idba/examples/README -rw-r--r-- root/root 719 2020-04-18 06:20 ./usr/share/doc/idba/examples/data-source.sh drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ -rw-r--r-- root/root 10750 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_ref.fa -rw-r--r-- root/root 5085 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_target.fa -rw-r--r-- root/root 10732 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/efergusonii_ref.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/ -rw-r--r-- root/root 565135 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa -rw-r--r-- root/root 886740 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa.list drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/ -rw-r--r-- root/root 5072 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/220668.fa -rw-r--r-- root/root 5098 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/321956.fa -rw-r--r-- root/root 5084 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/557433.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 813 2020-04-18 06:20 ./usr/share/man/man1/idba.1.gz -rw-r--r-- root/root 941 2020-04-18 06:20 ./usr/share/man/man1/idba_hybrid.1.gz -rw-r--r-- root/root 856 2020-04-18 06:20 ./usr/share/man/man1/idba_tran.1.gz -rw-r--r-- root/root 905 2020-04-18 06:20 ./usr/share/man/man1/idba_ud.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [557 B] Get:5 copy:/<>/apt_archive ./ Packages [619 B] Fetched 2139 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:armhf t1utils unzip 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 14.3 MB of archives. After this operation, 52.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.3 [19.9 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2~rc2-2 [75.8 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.5-2 [1421 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20211016 [156 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-4 [51.3 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2~rc2-2 [173 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.35-3 [578 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.39.2-1 [838 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.35-3 [961 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.11.0-1 [2834 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-2 [14.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b1 [72.1 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2 [11.2 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-2 [13.1 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-1+b3 [16.0 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2 [25.6 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-2 [8044 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.62-2 [45.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-1+b2 [124 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-5 [13.1 kB] Get:28 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:29 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.12-1 [93.7 kB] Get:30 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.78-1 [105 kB] Get:31 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.54-1 [224 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:33 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.13-2 [19.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4 [37.5 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.45-1+b2 [15.5 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-1 [17.3 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-1+b2 [25.7 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.928-2 [11.0 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.32-1 [130 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libexporter-tiny-perl all 1.004000-1 [38.7 kB] Get:48 http://localhost:3142/debian sid/main amd64 liblist-moreutils-xs-perl amd64 0.430-3 [40.3 kB] Get:49 http://localhost:3142/debian sid/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1 [35.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-2 [33.7 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:54 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:55 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2 [104 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:58 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:59 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2 [25.8 kB] Get:60 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1 [29.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-2 [13.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:64 http://localhost:3142/debian sid/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:65 http://localhost:3142/debian sid/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:66 http://localhost:3142/debian sid/main amd64 libfile-find-rule-perl all 0.34-2 [28.4 kB] Get:67 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:69 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:70 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:71 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:72 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:73 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.37-1 [80.9 kB] Get:74 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.10-1 [24.0 kB] Get:75 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-2 [21.6 kB] Get:76 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:77 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:78 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:79 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:80 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2 [343 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.074-2 [220 kB] Get:82 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:83 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:84 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:85 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.67-1 [194 kB] Get:86 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:88 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:89 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:90 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:91 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:93 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:94 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-4 [42.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:97 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-3 [18.8 kB] Get:98 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:100 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:101 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:102 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:103 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b2 [173 kB] Get:104 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-2 [11.9 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2 [13.7 kB] Get:107 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:108 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.122-1 [56.0 kB] Get:109 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1 [17.5 kB] Get:110 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b1 [12.2 kB] Get:111 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b1 [46.9 kB] Get:112 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:113 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 4.025+ds-1 [103 kB] Get:114 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 4.025+ds-1 [104 kB] Get:115 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-2 [10.7 kB] Get:116 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.25-1 [53.3 kB] Get:117 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.27-1 [28.5 kB] Get:118 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2 [27.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5 [8656 B] Get:120 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b1 [13.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b1 [197 kB] Get:122 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:123 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2 [73.0 kB] Get:124 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-1+b3 [20.3 kB] Get:125 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.15-1 [120 kB] Get:126 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:127 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1+b1 [35.9 kB] Get:128 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-4 [64.0 kB] Get:129 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:130 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:131 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:132 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-27 [172 kB] Get:133 http://localhost:3142/debian sid/main amd64 lintian all 2.115.3 [1417 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.3 MB in 0s (108 MB/s) Selecting previously unselected package netbase. (Reading database ... 19407 files and directories currently installed.) Preparing to unpack .../000-netbase_6.3_all.deb ... Unpacking netbase (6.3) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2~rc2-2_all.deb ... Unpacking readline-common (8.2~rc2-2) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.5-2_amd64.deb ... Unpacking openssl (3.0.5-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-4_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-4) ... Selecting previously unselected package libreadline8:amd64. 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Selecting previously unselected package plzip. Preparing to unpack .../126-plzip_1.10-4_amd64.deb ... Unpacking plzip (1.10-4) ... Selecting previously unselected package lzop. Preparing to unpack .../127-lzop_1.04-2_amd64.deb ... Unpacking lzop (1.04-2) ... Selecting previously unselected package patchutils. Preparing to unpack .../128-patchutils_0.4.2-1_amd64.deb ... Unpacking patchutils (0.4.2-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../129-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package unzip. Preparing to unpack .../130-unzip_6.0-27_amd64.deb ... Unpacking unzip (6.0-27) ... Selecting previously unselected package lintian. Preparing to unpack .../131-lintian_2.115.3_all.deb ... Unpacking lintian (2.115.3) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../132-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b1) ... Setting up liblz1:amd64 (1.13-4) ... Setting up libberkeleydb-perl:amd64 (0.64-1+b2) ... Setting up plzip (1.10-4) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-1+b3) ... Setting up libmouse-perl (2.5.10-1+b2) ... Setting up libdata-messagepack-perl (1.02-1) ... Setting up libdynaloader-functions-perl (0.003-2) ... Setting up libtext-glob-perl (0.11-2) ... Setting up libclass-method-modifiers-perl (2.13-2) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b2) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-2) ... Setting up libcpanel-json-xs-perl:amd64 (4.32-1) ... Setting up libhtml-tagset-perl (3.20-5) ... Setting up libdevel-size-perl (0.83-2) ... Setting up unzip (6.0-27) ... Setting up libsqlite3-0:amd64 (3.39.2-1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.83+ds-1+b1) ... Setting up libio-interactive-perl (1.023-1) ... Setting up libtry-tiny-perl (0.31-1) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-3) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2) ... Setting up libencode-locale-perl (1.05-2) ... Setting up libassuan0:amd64 (2.5.5-4) ... Setting up libconfig-tiny-perl (2.28-1) ... Setting up libsereal-encoder-perl:amd64 (4.025+ds-1) ... Setting up liblist-utilsby-perl (0.12-1) ... Setting up libnet-netmask-perl (2.0001-1) ... Setting up libsub-install-perl (0.928-2) ... Setting up libnumber-compare-perl (0.03-2) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.25-1) ... Setting up libfile-find-rule-perl (0.34-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-2) ... Setting up libperlio-utf8-strict-perl (0.009-1+b1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-2) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2) ... Setting up liblist-moreutils-xs-perl (0.430-3) ... Setting up libparams-util-perl (1.102-1+b2) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-2) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:amd64 (0.26-2) ... Setting up libsyntax-keyword-try-perl (0.27-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b1) ... Setting up libpath-tiny-perl (0.122-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-2) ... Setting up netbase (6.3) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-4) ... Setting up libsort-versions-perl (1.62-2) ... Setting up libexporter-tiny-perl (1.004000-1) ... Setting up libterm-readkey-perl (2.38-2) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.5-2) ... Setting up libtext-levenshteinxs-perl (0.03-5) ... Setting up libperlio-gzip-perl (0.20-1) ... Setting up readline-common (8.2~rc2-2) ... Setting up libhtml-html5-entities-perl (0.004-2) ... Setting up libsereal-decoder-perl (4.025+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.12-1) ... Setting up iso-codes (4.11.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.05-1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:amd64 (8.2~rc2-2) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b3) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.78-1) ... Setting up gpgconf (2.2.35-3) ... Setting up libio-socket-ssl-perl (2.074-2) ... Setting up gpg (2.2.35-3) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libhttp-message-perl (6.37-1) ... Setting up libhtml-form-perl (6.10-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl:amd64 (0.015-2) ... Setting up libcgi-pm-perl (4.54-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.15-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.3) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.34-7) ... Processing triggers for man-db (2.10.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 246908 Build-Time: 159 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 10 Job: idba_1.1.3-7 Lintian: pass Machine Architecture: amd64 Package: idba Package-Time: 183 Source-Version: 1.1.3-7 Space: 246908 Status: successful Version: 1.1.3-7 -------------------------------------------------------------------------------- Finished at 2022-09-05T12:07:11Z Build needed 00:03:03, 246908k disk space