sbuild (Debian sbuild) 0.78.1 (09 February 2019) on mjolnir +==============================================================================+ | idba 1.1.3-7 (i386) Sun, 06 Jun 2021 10:23:57 +0000 | +==============================================================================+ Package: idba Version: 1.1.3-7 Source Version: 1.1.3-7 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/crossqa-sid-66bcd95e-49a5-481d-8024-721fb007ad76' with '<>' I: NOTICE: Log filtering will replace 'build/idba-lJUB8t/resolver-vwKa57' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [157 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main Sources.diff/Index [63.6 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:4 http://mirror.einval.org/debian sid/main i386 Packages [8560 kB] Get:5 http://mirror.einval.org/debian sid/main Sources [9175 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 Packages [8507 kB] Fetched 26.4 MB in 7s (3807 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'idba' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/idba.git Please use: git clone https://salsa.debian.org/med-team/idba.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 711 kB of source archives. Get:1 http://mirror.einval.org/debian sid/main idba 1.1.3-7 (dsc) [2022 B] Get:2 http://mirror.einval.org/debian sid/main idba 1.1.3-7 (tar) [446 kB] Get:3 http://mirror.einval.org/debian sid/main idba 1.1.3-7 (diff) [263 kB] Fetched 711 kB in 0s (9212 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/idba-lJUB8t/idba-1.1.3' with '<>' I: NOTICE: Log filtering will replace 'build/idba-lJUB8t' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 12), libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [426 B] Get:5 copy:/<>/apt_archive ./ Packages [490 B] Fetched 1873 B in 0s (45.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-10-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-10-i686-linux-gnu g++-i686-linux-gnu gcc-10-base:i386 gcc-10-cross-base gcc-10-i686-linux-gnu gcc-10-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:i386 libgcc-10-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-10-dev:i386 libstdc++-10-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch g++-10-multilib-i686-linux-gnu gcc-10-doc gcc-10-multilib-i686-linux-gnu manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:i386 libc-l10n:i386 locales:i386 manpages-dev:i386 krb5-doc:i386 krb5-user:i386 libstdc++-10-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:i386 libnss-nis:i386 libnss-nisplus:i386 libarchive-cpio-perl krb5-locales:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-10-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-10-i686-linux-gnu g++-i686-linux-gnu gcc-10-base:i386 gcc-10-cross-base gcc-10-i686-linux-gnu gcc-10-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:i386 libgcc-10-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-10-dev:i386 libstdc++-10-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:i386 sensible-utils ucf 0 upgraded, 98 newly installed, 0 to remove and 0 not upgraded. Need to get 200 MB of archives. After this operation, 902 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://mirror.einval.org/debian sid/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-4+b1 [18.9 kB] Get:8 http://mirror.einval.org/debian sid/main i386 gcc-10-base i386 10.2.1-6 [201 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 file arm64 1:5.39-3 [69.1 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 gettext-base arm64 0.21-4 [173 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 ucf all 3.0043 [74.0 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get:16 http://mirror.einval.org/debian sid/main arm64 m4 arm64 1.4.18-5 [199 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 autoconf all 2.69-14 [313 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 automake all 1:1.16.3-2 [814 kB] Get:20 http://mirror.einval.org/debian sid/main arm64 autopoint all 0.21-4 [510 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 gcc-10-i686-linux-gnu-base arm64 10.2.1-6cross1 [202 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 cpp-10-i686-linux-gnu arm64 10.2.1-6cross1 [46.1 MB] Get:23 http://mirror.einval.org/debian sid/main arm64 cpp-i686-linux-gnu arm64 4:10.2.1-1 [16.8 kB] Get:24 http://mirror.einval.org/debian sid/main arm64 cross-config all 2.6.18+nmu1 [31.5 kB] Get:25 http://mirror.einval.org/debian sid/main arm64 binutils-i686-linux-gnu arm64 2.35.2-2 [1967 kB] Get:26 http://mirror.einval.org/debian sid/main arm64 gcc-10-cross-base all 10.2.1-6cross1 [197 kB] Get:27 http://mirror.einval.org/debian sid/main arm64 libc6-i386-cross all 2.31-9cross4 [1502 kB] Get:28 http://mirror.einval.org/debian sid/main arm64 libgcc-s1-i386-cross all 10.2.1-6cross1 [49.7 kB] Get:29 http://mirror.einval.org/debian sid/main arm64 libgomp1-i386-cross all 10.2.1-6cross1 [104 kB] Get:30 http://mirror.einval.org/debian sid/main arm64 libitm1-i386-cross all 10.2.1-6cross1 [28.3 kB] Get:31 http://mirror.einval.org/debian sid/main arm64 libatomic1-i386-cross all 10.2.1-6cross1 [9376 B] Get:32 http://mirror.einval.org/debian sid/main arm64 libasan6-i386-cross all 10.2.1-6cross1 [1923 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sid/main arm64 g++-10-i686-linux-gnu arm64 10.2.1-6cross1 [49.2 MB] Get:43 http://mirror.einval.org/debian sid/main arm64 g++-i686-linux-gnu arm64 4:10.2.1-1 [1176 B] Get:44 http://mirror.einval.org/debian sid/main arm64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:45 http://mirror.einval.org/debian sid/main arm64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 libicu67 arm64 67.1-6 [8468 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:51 http://mirror.einval.org/debian sid/main arm64 libxml-libxml-perl arm64 2.0134+dfsg-2+b1 [326 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libyaml-perl all 1.30-1 [67.7 kB] Get:54 http://mirror.einval.org/debian sid/main arm64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:55 http://mirror.einval.org/debian sid/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:59 http://mirror.einval.org/debian sid/main arm64 crossbuild-essential-i386 all 12.9 [6704 B] Get:60 http://mirror.einval.org/debian sid/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get:61 http://mirror.einval.org/debian sid/main arm64 libtool all 2.4.6-15 [513 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:67 http://mirror.einval.org/debian sid/main arm64 libelf1 arm64 0.183-3 [164 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 dwz arm64 0.14-1 [90.0 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 gettext arm64 0.21-4 [1261 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://mirror.einval.org/debian sid/main arm64 debhelper all 13.3.4 [1049 kB] Get:73 http://mirror.einval.org/debian sid/main i386 libgcc-s1 i386 10.2.1-6 [49.6 kB] Get:74 http://mirror.einval.org/debian sid/main i386 libcrypt1 i386 1:4.4.18-4 [97.2 kB] Get:75 http://mirror.einval.org/debian sid/main i386 libc6 i386 2.31-12 [2756 kB] Get:76 http://mirror.einval.org/debian sid/main i386 libasan6 i386 10.2.1-6 [1930 kB] Get:77 http://mirror.einval.org/debian sid/main i386 libatomic1 i386 10.2.1-6 [9508 B] Get:78 http://mirror.einval.org/debian sid/main i386 linux-libc-dev i386 5.10.40-1 [1348 kB] Get:79 http://mirror.einval.org/debian sid/main i386 libcrypt-dev i386 1:4.4.18-4 [116 kB] Get:80 http://mirror.einval.org/debian sid/main i386 libcom-err2 i386 1.46.2-1 [74.4 kB] Get:81 http://mirror.einval.org/debian sid/main i386 libkrb5support0 i386 1.18.3-5 [68.4 kB] Get:82 http://mirror.einval.org/debian sid/main i386 libk5crypto3 i386 1.18.3-5 [117 kB] Get:83 http://mirror.einval.org/debian sid/main i386 libkeyutils1 i386 1.6.1-2 [15.9 kB] Get:84 http://mirror.einval.org/debian sid/main i386 libssl1.1 i386 1.1.1k-1 [1550 kB] Get:85 http://mirror.einval.org/debian sid/main i386 libkrb5-3 i386 1.18.3-5 [390 kB] Get:86 http://mirror.einval.org/debian sid/main i386 libgssapi-krb5-2 i386 1.18.3-5 [176 kB] Get:87 http://mirror.einval.org/debian sid/main i386 libtirpc3 i386 1.3.1-1 [90.8 kB] Get:88 http://mirror.einval.org/debian sid/main i386 libnsl2 i386 1.3.0-2 [42.2 kB] Get:89 http://mirror.einval.org/debian sid/main i386 libtirpc-dev i386 1.3.1-1 [201 kB] Get:90 http://mirror.einval.org/debian sid/main i386 libnsl-dev i386 1.3.0-2 [70.6 kB] Get:91 http://mirror.einval.org/debian sid/main i386 libc6-dev i386 2.31-12 [3776 kB] Get:92 http://mirror.einval.org/debian sid/main i386 libgomp1 i386 10.2.1-6 [106 kB] Get:93 http://mirror.einval.org/debian sid/main i386 libitm1 i386 10.2.1-6 [28.6 kB] Get:94 http://mirror.einval.org/debian sid/main i386 libstdc++6 i386 10.2.1-6 [527 kB] Get:95 http://mirror.einval.org/debian sid/main i386 libubsan1 i386 10.2.1-6 [752 kB] Get:96 http://mirror.einval.org/debian sid/main i386 libquadmath0 i386 10.2.1-6 [228 kB] Get:97 http://mirror.einval.org/debian sid/main i386 libgcc-10-dev i386 10.2.1-6 [2324 kB] Get:98 http://mirror.einval.org/debian sid/main i386 libstdc++-10-dev i386 10.2.1-6 [1786 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 200 MB in 2s (85.8 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12271 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../05-liblocale-gettext-perl_1.07-4+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-6) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up binutils-i686-linux-gnu (2.35.2-2) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up linux-libc-dev:i386 (5.10.40-1) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libyaml-perl (1.30-1) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up gcc-10-base:i386 (10.2.1-6) ... Setting up linux-libc-dev-i386-cross (5.10.13-1cross4) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up gcc-10-cross-base (10.2.1-6cross1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libc6-i386-cross (2.31-9cross4) ... Setting up libsub-override-perl (0.09-2) ... Setting up gcc-10-i686-linux-gnu-base:arm64 (10.2.1-6cross1) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libquadmath0-i386-cross (10.2.1-6cross1) ... Setting up libelf1:arm64 (0.183-3) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libatomic1-i386-cross (10.2.1-6cross1) ... Setting up m4 (1.4.18-5) ... Setting up libgomp1-i386-cross (10.2.1-6cross1) ... Setting up libc6-dev-i386-cross (2.31-9cross4) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libgcc-s1-i386-cross (10.2.1-6cross1) ... Setting up libasan6-i386-cross (10.2.1-6cross1) ... Setting up cpp-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libitm1-i386-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-6) ... Setting up cpp-i686-linux-gnu (4:10.2.1-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++6-i386-cross (10.2.1-6cross1) ... Setting up dh-autoreconf (20) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.3.4) ... Setting up libubsan1-i386-cross (10.2.1-6cross1) ... Setting up libgcc-10-dev-i386-cross (10.2.1-6cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-10-dev-i386-cross (10.2.1-6cross1) ... Setting up gcc-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up gcc-i686-linux-gnu (4:10.2.1-1) ... Setting up g++-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up g++-i686-linux-gnu (4:10.2.1-1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-i386 (12.9) ... Setting up libgcc-s1:i386 (10.2.1-6) ... Setting up libcrypt1:i386 (1:4.4.18-4) ... Setting up libc6:i386 (2.31-12) ... Setting up libcrypt-dev:i386 (1:4.4.18-4) ... Setting up libstdc++6:i386 (10.2.1-6) ... Setting up libitm1:i386 (10.2.1-6) ... Setting up libkeyutils1:i386 (1.6.1-2) ... Setting up libssl1.1:i386 (1.1.1k-1) ... Setting up libcom-err2:i386 (1.46.2-1) ... Setting up libgomp1:i386 (10.2.1-6) ... Setting up libasan6:i386 (10.2.1-6) ... Setting up libkrb5support0:i386 (1.18.3-5) ... Setting up libquadmath0:i386 (10.2.1-6) ... Setting up libatomic1:i386 (10.2.1-6) ... Setting up libk5crypto3:i386 (1.18.3-5) ... Setting up libubsan1:i386 (10.2.1-6) ... Setting up libkrb5-3:i386 (1.18.3-5) ... Setting up libgcc-10-dev:i386 (10.2.1-6) ... Setting up libgssapi-krb5-2:i386 (1.18.3-5) ... Setting up libtirpc3:i386 (1.3.1-1) ... Setting up libtirpc-dev:i386 (1.3.1-1) ... Setting up libnsl2:i386 (1.3.0-2) ... Setting up libnsl-dev:i386 (1.3.0-2) ... Setting up libc6-dev:i386 (2.31-12) ... Setting up libstdc++-10-dev:i386 (10.2.1-6) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.31-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.9.0-0.bpo.2-arm64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) arm64 (aarch64) Toolchain package versions: binutils_2.35.2-2 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-12 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-i386-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-i386-cross_10.2.1-6cross1 linux-libc-dev_5.10.40-1 Package versions: adduser_3.118 apt_2.2.3 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.50 bash_5.1-3 binutils_2.35.2-2 binutils-aarch64-linux-gnu_2.35.2-2 binutils-common_2.35.2-2 binutils-i686-linux-gnu_2.35.2-2 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-i686-linux-gnu_10.2.1-6cross1 cpp-i686-linux-gnu_4:10.2.1-1 cross-config_2.6.18+nmu1 crossbuild-essential-i386_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.76 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-i686-linux-gnu_10.2.1-6cross1 g++-i686-linux-gnu_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-base_10.2.1-6 gcc-10-cross-base_10.2.1-6cross1 gcc-10-i686-linux-gnu_10.2.1-6cross1 gcc-10-i686-linux-gnu-base_10.2.1-6cross1 gcc-i686-linux-gnu_4:10.2.1-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg6.0_2.2.3 libarchive-zip-perl_1.68-1 libasan6_10.2.1-6 libasan6-i386-cross_10.2.1-6cross1 libatomic1_10.2.1-6 libatomic1-i386-cross_10.2.1-6cross1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2 libblkid1_2.36.1-7 libbz2-1.0_1.0.8-4 libc-bin_2.31-12 libc-dev-bin_2.31-12 libc6_2.31-12 libc6-dev_2.31-12 libc6-dev-i386-cross_2.31-9cross4 libc6-i386-cross_2.31-9cross4 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6 libcom-err2_1.46.2-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.18-4 libcrypt1_1:4.4.18-4 libctf-nobfd0_2.35.2-2 libctf0_2.35.2-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.259 libdebhelper-perl_13.3.4 libdebian-dpkgcross-perl_2.6.18+nmu1 libdpkg-perl_1.20.9 libelf1_0.183-3 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-6 libgcc-10-dev-i386-cross_10.2.1-6cross1 libgcc-s1_10.2.1-6 libgcc-s1-i386-cross_10.2.1-6cross1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_10.2.1-6 libgomp1-i386-cross_10.2.1-6cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-5 libhogweed6_3.7.2-3 libicu67_67.1-6 libidn2-0_2.3.0-5 libio-string-perl_1.08-3.1 libisl23_0.23-1 libitm1_10.2.1-6 libitm1-i386-cross_10.2.1-6cross1 libk5crypto3_1.18.3-5 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-5 libkrb5support0_1.18.3-5 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.1-6 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-7 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libnettle8_3.7.2-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-7 libpam-modules-bin_1.4.0-7 libpam-runtime_1.4.0-7 libpam0g_1.4.0-7 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libquadmath0_10.2.1-6 libquadmath0-i386-cross_10.2.1-6cross1 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-i386-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-i386-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.3-5 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtsan0_10.2.1-6 libubsan1_10.2.1-6 libubsan1-i386-cross_10.2.1-6cross1 libuchardet0_0.0.7-1 libudev1_247.3-5 libunistring2_0.9.10-4 libuuid1_2.36.1-7 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 linux-libc-dev_5.10.40-1 linux-libc-dev-i386-cross_5.10.13-1cross4 login_1:4.8.1-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-7 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4 perl-base_5.32.1-4 perl-modules-5.32_5.32.1-4 po-debconf_1.0.21+nmu1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 util-linux_2.36.1-7 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: idba Binary: idba, idba-extra Architecture: any Version: 1.1.3-7 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/loneknightpy/idba Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/idba Vcs-Git: https://salsa.debian.org/med-team/idba.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), libgtest-dev , python3 Package-List: idba deb science optional arch=any idba-extra deb science optional arch=any Checksums-Sha1: cf673154a9696215648177f0bc43b9cc25feaf26 446227 idba_1.1.3.orig.tar.gz 359f30b05dc8923891739df705e636c461ad3e89 263052 idba_1.1.3-7.debian.tar.xz Checksums-Sha256: 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0 446227 idba_1.1.3.orig.tar.gz 540627574366ca2cbb36bed35fcc988d74418d95aae1b23676ecd73e6d632c84 263052 idba_1.1.3-7.debian.tar.xz Files: 41fe7eabdcfaea677558f3e4baeb2ea8 446227 idba_1.1.3.orig.tar.gz 2be67984af689e298100b910d25d62c1 263052 idba_1.1.3-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6angURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH+8g/8CQd9AFe9DX5WDeO5yieSGbai6F93dklW 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signature: No public key dpkg-source: warning: failed to verify signature on ./idba_1.1.3-7.dsc dpkg-source: info: extracting idba in /<> dpkg-source: info: unpacking idba_1.1.3.orig.tar.gz dpkg-source: info: unpacking idba_1.1.3-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install_all_idba_flavours.patch dpkg-source: info: applying use-atomic-for-mips.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_debian_packaged_googletest.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 0 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmutg PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=crossqa-sid SCHROOT_CHROOT_NAME=crossqa-sid SCHROOT_COMMAND=env SCHROOT_GID=1002 SCHROOT_GROUP=helmutg SCHROOT_SESSION_ID=crossqa-sid-66bcd95e-49a5-481d-8024-721fb007ad76 SCHROOT_UID=1002 SCHROOT_USER=helmutg SHELL=/bin/sh USER=helmutg dpkg-buildpackage ----------------- Command: dpkg-buildpackage -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package idba dpkg-buildpackage: info: source version 1.1.3-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:8: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation bin/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') bin/Makefile.am:9: warning: source file '$(top_srcdir)/src/tools/fa2fq.cpp' is in a subdirectory, bin/Makefile.am:9: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. bin/Makefile.am:19: warning: source file '$(top_srcdir)/src/tools/filter_blat.cpp' is in a subdirectory, bin/Makefile.am:19: but option 'subdir-objects' is disabled bin/Makefile.am:17: warning: source file '$(top_srcdir)/src/tools/filter_contigs.cpp' is in a subdirectory, bin/Makefile.am:17: but option 'subdir-objects' is disabled bin/Makefile.am:33: warning: source file '$(top_srcdir)/src/release/filterfa.cpp' is in a subdirectory, bin/Makefile.am:33: but option 'subdir-objects' is disabled bin/Makefile.am:25: warning: source file '$(top_srcdir)/src/release/fq2fa.cpp' is in a subdirectory, bin/Makefile.am:25: but option 'subdir-objects' is disabled bin/Makefile.am:34: warning: source file '$(top_srcdir)/src/release/idba.cpp' is in a subdirectory, bin/Makefile.am:34: but option 'subdir-objects' is disabled bin/Makefile.am:30: warning: source file '$(top_srcdir)/src/release/idba_hybrid.cpp' is in a subdirectory, bin/Makefile.am:30: but option 'subdir-objects' is disabled bin/Makefile.am:29: warning: source file '$(top_srcdir)/src/release/idba_tran.cpp' is in a subdirectory, bin/Makefile.am:29: but option 'subdir-objects' is disabled bin/Makefile.am:13: warning: source file '$(top_srcdir)/src/tools/idba_tran_test.cpp' is in a subdirectory, bin/Makefile.am:13: but option 'subdir-objects' is disabled bin/Makefile.am:27: warning: source file '$(top_srcdir)/src/release/idba_ud.cpp' is in a subdirectory, bin/Makefile.am:27: but option 'subdir-objects' is disabled bin/Makefile.am:31: warning: source file '$(top_srcdir)/src/release/parallel_blat.cpp' is in a subdirectory, bin/Makefile.am:31: but option 'subdir-objects' is disabled bin/Makefile.am:18: warning: source file '$(top_srcdir)/src/tools/parallel_rna_blat.cpp' is in a subdirectory, bin/Makefile.am:18: but option 'subdir-objects' is disabled bin/Makefile.am:12: warning: source file '$(top_srcdir)/src/tools/print_graph.cpp' is in a subdirectory, bin/Makefile.am:12: but option 'subdir-objects' is disabled bin/Makefile.am:28: warning: source file '$(top_srcdir)/src/release/raw_n50.cpp' is in a subdirectory, bin/Makefile.am:28: but option 'subdir-objects' is disabled bin/Makefile.am:14: warning: source file '$(top_srcdir)/src/tools/sample_reads.cpp' is in a subdirectory, bin/Makefile.am:14: but option 'subdir-objects' is disabled bin/Makefile.am:7: warning: source file '$(top_srcdir)/src/tools/scaffold.cpp' is in a subdirectory, bin/Makefile.am:7: but option 'subdir-objects' is disabled bin/Makefile.am:6: warning: source file '$(top_srcdir)/src/tools/shuffle_reads.cpp' is in a subdirectory, bin/Makefile.am:6: but option 'subdir-objects' is disabled bin/Makefile.am:36: warning: source file '$(top_srcdir)/src/release/sim_reads.cpp' is in a subdirectory, bin/Makefile.am:36: but option 'subdir-objects' is disabled bin/Makefile.am:32: warning: source file '$(top_srcdir)/src/release/sim_reads_tran.cpp' is in a subdirectory, bin/Makefile.am:32: but option 'subdir-objects' is disabled bin/Makefile.am:15: warning: source file '$(top_srcdir)/src/tools/sort_psl.cpp' is in a subdirectory, bin/Makefile.am:15: but option 'subdir-objects' is disabled bin/Makefile.am:16: warning: source file '$(top_srcdir)/src/tools/sort_reads.cpp' is in a subdirectory, bin/Makefile.am:16: but option 'subdir-objects' is disabled bin/Makefile.am:20: warning: source file '$(top_srcdir)/src/tools/split_fa.cpp' is in a subdirectory, bin/Makefile.am:20: but option 'subdir-objects' is disabled bin/Makefile.am:23: warning: source file '$(top_srcdir)/src/tools/split_fq.cpp' is in a subdirectory, bin/Makefile.am:23: but option 'subdir-objects' is disabled bin/Makefile.am:35: warning: source file '$(top_srcdir)/src/release/split_scaffold.cpp' is in a subdirectory, bin/Makefile.am:35: but option 'subdir-objects' is disabled bin/Makefile.am:21: warning: source file '$(top_srcdir)/src/tools/test.cpp' is in a subdirectory, bin/Makefile.am:21: but option 'subdir-objects' is disabled bin/Makefile.am:8: warning: source file '$(top_srcdir)/src/tools/validate_component.cpp' is in a subdirectory, bin/Makefile.am:8: but option 'subdir-objects' is disabled bin/Makefile.am:26: warning: source file '$(top_srcdir)/src/release/validate_contigs_blat.cpp' is in a subdirectory, bin/Makefile.am:26: but option 'subdir-objects' is disabled bin/Makefile.am:11: warning: source file '$(top_srcdir)/src/tools/validate_contigs_mummer.cpp' is in a subdirectory, bin/Makefile.am:11: but option 'subdir-objects' is disabled bin/Makefile.am:22: warning: source file '$(top_srcdir)/src/tools/validate_reads_blat.cpp' is in a subdirectory, bin/Makefile.am:22: but option 'subdir-objects' is disabled bin/Makefile.am:10: warning: source file '$(top_srcdir)/src/tools/validate_rna.cpp' is in a subdirectory, bin/Makefile.am:10: but option 'subdir-objects' is disabled lib/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/basic/math.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/hash_aligner.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/options_description.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/log.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/utils.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/blat_record.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/short_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_reader.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_writer.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_io.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/compact_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/scaffold_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_info.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/local_assembler.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/assembly_utility.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest-all.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled test/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') test/Makefile.am:11: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:11: warning: source file '$(top_srcdir)/src/test/atomic_integer_unittest.cpp' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/src/test/bit_edges_unittest.cpp' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/src/test/compact_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/src/test/hash_map_unittest.cpp' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/src/test/hash_set_unittest.cpp' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/src/test/hash_table_unittest.cpp' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/src/test/histgram_unittest.cpp' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/src/test/kmer_unittest.cpp' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/src/test/managed_list_unittest.cpp' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/src/test/sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/src/test/short_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/src/test/vertex_status_unittest.cpp' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- LDFLAGS="-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" LIBS=" -latomic" ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=i686-linux-gnu "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" "LIBS= -latomic" configure: loading site script /etc/dpkg-cross/cross-config.i386 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for i686-linux-gnu-strip... i686-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for i686-linux-gnu-g++... i686-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether i686-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of i686-linux-gnu-g++... none checking for i686-linux-gnu-gcc... i686-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether i686-linux-gnu-gcc accepts -g... yes checking for i686-linux-gnu-gcc option to accept ISO C89... none needed checking whether i686-linux-gnu-gcc understands -c and -o together... yes checking dependency style of i686-linux-gnu-gcc... none checking for i686-linux-gnu-ranlib... i686-linux-gnu-ranlib checking how to run the C preprocessor... i686-linux-gnu-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for working memcmp... no checking for vprintf... yes checking for _doprnt... no checking for sqrt... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating bin/Makefile config.status: creating lib/Makefile config.status: creating test/Makefile config.status: creating script/Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in lib make[3]: Entering directory '/<>/lib' i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o math.o `test -f '../src/basic/math.cpp' || echo './'`../src/basic/math.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_aligner.o `test -f '../src/misc/hash_aligner.cpp' || echo './'`../src/misc/hash_aligner.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o options_description.o `test -f '../src/misc/options_description.cpp' || echo './'`../src/misc/options_description.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o log.o `test -f '../src/misc/log.cpp' || echo './'`../src/misc/log.cpp ../src/misc/log.cpp: In destructor ‘LogProcess::~LogProcess()’: ../src/misc/log.cpp:78:13: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 78 | throw runtime_error("cannot kill log process"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../src/misc/log.cpp:78:13: note: in C++11 destructors default to ‘noexcept’ ../src/misc/log.cpp: In static member function ‘static void* LogThread::LogThreadFunc(void*)’: ../src/misc/log.cpp:122:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 122 | write(log_thread.out_fd, line, len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.o `test -f '../src/misc/utils.cpp' || echo './'`../src/misc/utils.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blat_record.o `test -f '../src/misc/blat_record.cpp' || echo './'`../src/misc/blat_record.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o short_sequence.o `test -f '../src/sequence/short_sequence.cpp' || echo './'`../src/sequence/short_sequence.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_reader.o `test -f '../src/sequence/sequence_reader.cpp' || echo './'`../src/sequence/sequence_reader.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_writer.o `test -f '../src/sequence/sequence_writer.cpp' || echo './'`../src/sequence/sequence_writer.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_io.o `test -f '../src/sequence/sequence_io.cpp' || echo './'`../src/sequence/sequence_io.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence.o `test -f '../src/sequence/sequence.cpp' || echo './'`../src/sequence/sequence.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compact_sequence.o `test -f '../src/sequence/compact_sequence.cpp' || echo './'`../src/sequence/compact_sequence.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph_branch_group.o `test -f '../src/graph/contig_graph_branch_group.cpp' || echo './'`../src/graph/contig_graph_branch_group.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph.o `test -f '../src/graph/hash_graph.cpp' || echo './'`../src/graph/hash_graph.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold_graph.o `test -f '../src/graph/scaffold_graph.cpp' || echo './'`../src/graph/scaffold_graph.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph.o `test -f '../src/graph/contig_graph.cpp' || echo './'`../src/graph/contig_graph.cpp ../src/graph/contig_graph.cpp: In member function ‘void ContigGraph::TopSort(std::deque&, std::deque&)’: ../src/graph/contig_graph.cpp:1391:30: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 1391 | ContigGraphVertexAdaptor end = GetEndVertexAdaptor(component); | ^~~ i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph_branch_group.o `test -f '../src/graph/hash_graph_branch_group.cpp' || echo './'`../src/graph/hash_graph_branch_group.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_info.o `test -f '../src/graph/contig_info.cpp' || echo './'`../src/graph/contig_info.cpp i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o local_assembler.o `test -f '../src/assembly/local_assembler.cpp' || echo './'`../src/assembly/local_assembler.cpp ../src/assembly/local_assembler.cpp: In static member function ‘static void* LocalAssemblerWithReference::LocalAssembleThread(void*)’: ../src/assembly/local_assembler.cpp:488:22: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 488 | bool flag = false; | ^~~~ ../src/assembly/local_assembler.cpp:489:21: warning: variable ‘aligned’ set but not used [-Wunused-but-set-variable] 489 | int aligned[2] = {0}; | ^~~~~~~ i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assembly_utility.o `test -f '../src/assembly/assembly_utility.cpp' || echo './'`../src/assembly/assembly_utility.cpp rm -f libassembly.a ar cru libassembly.a math.o hash_aligner.o options_description.o log.o utils.o blat_record.o short_sequence.o sequence_reader.o sequence_writer.o sequence_io.o sequence.o compact_sequence.o contig_graph_branch_group.o hash_graph.o scaffold_graph.o contig_graph.o hash_graph_branch_group.o contig_info.o local_assembler.o assembly_utility.o ar: `u' modifier ignored since `D' is the default (see `U') i686-linux-gnu-ranlib libassembly.a i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest_main.o `test -f '../gtest_src/gtest/gtest_main.cc' || echo './'`../gtest_src/gtest/gtest_main.cc i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest-all.o `test -f '../gtest_src/gtest/gtest-all.cc' || echo './'`../gtest_src/gtest/gtest-all.cc In file included from /usr/i686-linux-gnu/include/string.h:495, from ../gtest_src/gtest/gtest.h:285, from ../gtest_src/gtest/gtest-all.cc:39: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘const char* testing::internal::posix::StrNCpy(char*, const char*, size_t)’ at ../gtest_src/gtest/gtest.h:2672:17, inlined from ‘char* testing::internal::CloneString(const char*, size_t)’ at ../gtest_src/gtest/gtest-all.cc:2144:19, inlined from ‘static const char* testing::internal::String::CloneCString(const char*)’ at ../gtest_src/gtest/gtest-all.cc:2155:39: /usr/i686-linux-gnu/include/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../gtest_src/gtest/gtest-all.cc: In static member function ‘static const char* testing::internal::String::CloneCString(const char*)’: ../gtest_src/gtest/gtest-all.cc:2155:39: note: length computed here 2155 | NULL : CloneString(c_str, strlen(c_str)); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ rm -f libgtest.a ar cru libgtest.a gtest_main.o gtest-all.o ar: `u' modifier ignored since `D' is the default (see `U') i686-linux-gnu-ranlib libgtest.a make[3]: Leaving directory '/<>/lib' Making all in bin make[3]: Entering directory '/<>/bin' i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba.o `test -f '../src/release/idba.cpp' || echo './'`../src/release/idba.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba idba.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_ud.o `test -f '../src/release/idba_ud.cpp' || echo './'`../src/release/idba_ud.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_ud idba_ud.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran.o `test -f '../src/release/idba_tran.cpp' || echo './'`../src/release/idba_tran.cpp ../src/release/idba_tran.cpp: In function ‘void FindIsoforms(ContigGraphPath&, std::deque&, ContigGraph&, std::deque&)’: ../src/release/idba_tran.cpp:241:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 241 | if (flag && path.size() > option.min_transcript) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void Assemble(HashGraph&)’: ../src/release/idba_tran.cpp:523:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 523 | if (transcripts[i].size() >= option.min_transcript) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran idba_tran.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_hybrid.o `test -f '../src/release/idba_hybrid.cpp' || echo './'`../src/release/idba_hybrid.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_hybrid idba_hybrid.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle_reads.o `test -f '../src/tools/shuffle_reads.cpp' || echo './'`../src/tools/shuffle_reads.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o shuffle_reads shuffle_reads.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold.o `test -f '../src/tools/scaffold.cpp' || echo './'`../src/tools/scaffold.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o scaffold scaffold.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_component.o `test -f '../src/tools/validate_component.cpp' || echo './'`../src/tools/validate_component.cpp ../src/tools/validate_component.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_component.cpp:141:13: warning: unused variable ‘ref_id’ [-Wunused-variable] 141 | int ref_id = dict[record.ref_name]; | ^~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_component validate_component.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fa2fq.o `test -f '../src/tools/fa2fq.cpp' || echo './'`../src/tools/fa2fq.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fa2fq fa2fq.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_rna.o `test -f '../src/tools/validate_rna.cpp' || echo './'`../src/tools/validate_rna.cpp ../src/tools/validate_rna.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_rna.cpp:396:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 396 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_rna validate_rna.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_mummer.o `test -f '../src/tools/validate_contigs_mummer.cpp' || echo './'`../src/tools/validate_contigs_mummer.cpp ../src/tools/validate_contigs_mummer.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_contigs_mummer.cpp:218:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 218 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:219:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 219 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:220:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 220 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:221:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 221 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:222:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 222 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_mummer validate_contigs_mummer.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_graph.o `test -f '../src/tools/print_graph.cpp' || echo './'`../src/tools/print_graph.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o print_graph print_graph.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran_test.o `test -f '../src/tools/idba_tran_test.cpp' || echo './'`../src/tools/idba_tran_test.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran_test idba_tran_test.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sample_reads.o `test -f '../src/tools/sample_reads.cpp' || echo './'`../src/tools/sample_reads.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sample_reads sample_reads.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_psl.o `test -f '../src/tools/sort_psl.cpp' || echo './'`../src/tools/sort_psl.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_psl sort_psl.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_reads.o `test -f '../src/tools/sort_reads.cpp' || echo './'`../src/tools/sort_reads.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_reads sort_reads.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_contigs.o `test -f '../src/tools/filter_contigs.cpp' || echo './'`../src/tools/filter_contigs.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_contigs filter_contigs.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_rna_blat.o `test -f '../src/tools/parallel_rna_blat.cpp' || echo './'`../src/tools/parallel_rna_blat.cpp ../src/tools/parallel_rna_blat.cpp: In function ‘void CreateFile(const string&)’: ../src/tools/parallel_rna_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RemoveFile(const string&)’: ../src/tools/parallel_rna_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void Append(const string&, const string&)’: ../src/tools/parallel_rna_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RunBlat(const string&)’: ../src/tools/parallel_rna_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_rna_blat parallel_rna_blat.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_blat.o `test -f '../src/tools/filter_blat.cpp' || echo './'`../src/tools/filter_blat.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_blat filter_blat.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fa.o `test -f '../src/tools/split_fa.cpp' || echo './'`../src/tools/split_fa.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fa split_fa.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test.o `test -f '../src/tools/test.cpp' || echo './'`../src/tools/test.cpp ../src/tools/test.cpp:6:32: warning: extra tokens at end of #include directive 6 | #include "graph/contig_graph.h"; | ^ ../src/tools/test.cpp:7:31: warning: extra tokens at end of #include directive 7 | #include "sequence/sequence.h"; | ^ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o test test.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_reads_blat.o `test -f '../src/tools/validate_reads_blat.cpp' || echo './'`../src/tools/validate_reads_blat.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_reads_blat validate_reads_blat.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fq.o `test -f '../src/tools/split_fq.cpp' || echo './'`../src/tools/split_fq.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fq split_fq.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fq2fa.o `test -f '../src/release/fq2fa.cpp' || echo './'`../src/release/fq2fa.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fq2fa fq2fa.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_blat.o `test -f '../src/release/validate_contigs_blat.cpp' || echo './'`../src/release/validate_contigs_blat.cpp ../src/release/validate_contigs_blat.cpp: In function ‘int main(int, char**)’: ../src/release/validate_contigs_blat.cpp:388:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 388 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_blat validate_contigs_blat.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o raw_n50.o `test -f '../src/release/raw_n50.cpp' || echo './'`../src/release/raw_n50.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o raw_n50 raw_n50.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_blat.o `test -f '../src/release/parallel_blat.cpp' || echo './'`../src/release/parallel_blat.cpp ../src/release/parallel_blat.cpp: In function ‘void CreateFile(const string&)’: ../src/release/parallel_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RemoveFile(const string&)’: ../src/release/parallel_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void Append(const string&, const string&)’: ../src/release/parallel_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RunBlat(const string&)’: ../src/release/parallel_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_blat parallel_blat.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads_tran.o `test -f '../src/release/sim_reads_tran.cpp' || echo './'`../src/release/sim_reads_tran.cpp ../src/release/sim_reads_tran.cpp: In function ‘int main(int, char**)’: ../src/release/sim_reads_tran.cpp:89:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 89 | fscanf(flist, "%s %lf", buf, &weight[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads_tran sim_reads_tran.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filterfa.o `test -f '../src/release/filterfa.cpp' || echo './'`../src/release/filterfa.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filterfa filterfa.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_scaffold.o `test -f '../src/release/split_scaffold.cpp' || echo './'`../src/release/split_scaffold.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_scaffold split_scaffold.o ../lib/libassembly.a -latomic i686-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads.o `test -f '../src/release/sim_reads.cpp' || echo './'`../src/release/sim_reads.cpp i686-linux-gnu-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads sim_reads.o ../lib/libassembly.a -latomic make[3]: Leaving directory '/<>/bin' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' Making all in script make[3]: Entering directory '/<>/script' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/script' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in bin make[2]: Entering directory '/<>/bin' make[3]: Entering directory '/<>/bin' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c idba idba_ud idba_tran idba_hybrid '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/bin' make[2]: Leaving directory '/<>/bin' Making install in test make[2]: Entering directory '/<>/test' make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>/test' Making install in script make[2]: Entering directory '/<>/script' make[3]: Entering directory '/<>/script' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c scan.py run-unittest.py validate_blat validate_blat_parallel '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/script' make[2]: Leaving directory '/<>/script' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # for the moment the role of these scripts is totally unknown but they do not seem to be necessary mv debian/idba/usr/bin/*.py debian/idba/usr/lib/idba/ mv debian/idba/usr/bin/validate_blat* debian/idba/usr/lib/idba/ make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/bin/run-unittest.py exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: idba (7), idba-extra (23) * dh_installdocs: idba (0), idba-extra (0) * dh_installexamples: idba (5), idba-extra (0) * dh_installman: idba (4), idba-extra (5) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/idba-extra/usr/bin/raw_n50 debian/idba-extra/usr/bin/sim_reads debian/idba-extra/usr/bin/sim_reads_tran debian/idba-extra/usr/bin/filter_blat debian/idba-extra/usr/bin/validate_contigs_blat debian/idba-extra/usr/bin/split_fq debian/idba-extra/usr/bin/sort_psl debian/idba-extra/usr/bin/filter_contigs debian/idba-extra/usr/bin/validate_contigs_mummer debian/idba-extra/usr/bin/sort_reads debian/idba-extra/usr/bin/fa2fq debian/idba-extra/usr/bin/validate_reads_blat debian/idba-extra/usr/bin/sample_reads debian/idba-extra/usr/bin/validate_rna debian/idba-extra/usr/bin/shuffle_reads debian/idba-extra/usr/bin/split_fa debian/idba-extra/usr/bin/split_scaffold debian/idba-extra/usr/bin/fq2fa were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'idba' in '../idba_1.1.3-7_i386.deb'. dpkg-deb: building package 'idba-dbgsym' in '../idba-dbgsym_1.1.3-7_i386.deb'. dpkg-deb: building package 'idba-extra' in '../idba-extra_1.1.3-7_i386.deb'. dpkg-deb: building package 'idba-extra-dbgsym' in '../idba-extra-dbgsym_1.1.3-7_i386.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../idba_1.1.3-7_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-06-06T10:36:01Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ idba_1.1.3-7_i386.changes: -------------------------- Format: 1.8 Date: Sat, 18 Apr 2020 08:20:19 +0200 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 1.1.3-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: idba - iterative De Bruijn Graph short read assemblers idba-extra - iterative De Bruijn Graph short read assemblers (extra tools) Changes: idba (1.1.3-7) unstable; urgency=medium . * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 98ca210eac0382ba7a9c890948382f7632d6ac62 9960704 idba-dbgsym_1.1.3-7_i386.deb 3ecc80bee4ced8a7834b925864d3db261f84d496 7834736 idba-extra-dbgsym_1.1.3-7_i386.deb ae0c84dec1be02d004085e79b8f02b61e39c6c78 419944 idba-extra_1.1.3-7_i386.deb a7de37ceb1a9e60439a2aec06b327f4efc738a21 5265 idba_1.1.3-7_i386.buildinfo a935c27cdb39a39f1ddc7d205c96d51acac512de 682640 idba_1.1.3-7_i386.deb Checksums-Sha256: 9df945d2a8b7dd4f2d468ae19e8b021bc90a486868568bf508463dd81951e75d 9960704 idba-dbgsym_1.1.3-7_i386.deb 75d90badbdd03f91f080643471255ed6960e1f9768a0ed5bb11aaf84be66e52e 7834736 idba-extra-dbgsym_1.1.3-7_i386.deb e45b1d63bc6ba00483bce08b39c80e776af3418c36bdaa0a4fcf2474279a7a38 419944 idba-extra_1.1.3-7_i386.deb 89a5fe21f5ef02c20558bfa16bffe80e4080c81a4a1f2dbca4ab16a37e769479 5265 idba_1.1.3-7_i386.buildinfo 88b6bed893e94362bc62b0c99f56ab7fd5dbd8c5dd87b89c63be33984a3d8be8 682640 idba_1.1.3-7_i386.deb Files: f224842b4ba88a854404ef03ab4d04d0 9960704 debug optional idba-dbgsym_1.1.3-7_i386.deb f12145c3dccbea19076eba3e5b9b00b9 7834736 debug optional idba-extra-dbgsym_1.1.3-7_i386.deb af851f28ec096177a4f07ce6f14cf25d 419944 science optional idba-extra_1.1.3-7_i386.deb f799a1ceac8aa86334f9cf1bbfb1ed97 5265 science optional idba_1.1.3-7_i386.buildinfo e41201bca99cdcde6b64bda0d47f3037 682640 science optional idba_1.1.3-7_i386.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Architecture: i386 Version: 1.1.3-7 Checksums-Md5: f224842b4ba88a854404ef03ab4d04d0 9960704 idba-dbgsym_1.1.3-7_i386.deb f12145c3dccbea19076eba3e5b9b00b9 7834736 idba-extra-dbgsym_1.1.3-7_i386.deb af851f28ec096177a4f07ce6f14cf25d 419944 idba-extra_1.1.3-7_i386.deb e41201bca99cdcde6b64bda0d47f3037 682640 idba_1.1.3-7_i386.deb Checksums-Sha1: 98ca210eac0382ba7a9c890948382f7632d6ac62 9960704 idba-dbgsym_1.1.3-7_i386.deb 3ecc80bee4ced8a7834b925864d3db261f84d496 7834736 idba-extra-dbgsym_1.1.3-7_i386.deb ae0c84dec1be02d004085e79b8f02b61e39c6c78 419944 idba-extra_1.1.3-7_i386.deb a935c27cdb39a39f1ddc7d205c96d51acac512de 682640 idba_1.1.3-7_i386.deb Checksums-Sha256: 9df945d2a8b7dd4f2d468ae19e8b021bc90a486868568bf508463dd81951e75d 9960704 idba-dbgsym_1.1.3-7_i386.deb 75d90badbdd03f91f080643471255ed6960e1f9768a0ed5bb11aaf84be66e52e 7834736 idba-extra-dbgsym_1.1.3-7_i386.deb e45b1d63bc6ba00483bce08b39c80e776af3418c36bdaa0a4fcf2474279a7a38 419944 idba-extra_1.1.3-7_i386.deb 88b6bed893e94362bc62b0c99f56ab7fd5dbd8c5dd87b89c63be33984a3d8be8 682640 idba_1.1.3-7_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sun, 06 Jun 2021 10:36:00 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 11.1), base-passwd (= 3.5.50), bash (= 5.1-3), binutils (= 2.35.2-2), binutils-aarch64-linux-gnu (= 2.35.2-2), binutils-common (= 2.35.2-2), bsdextrautils (= 2.36.1-7), bsdutils (= 1:2.36.1-7), build-essential (= 12.9), bzip2 (= 1.0.8-4), coreutils (= 8.32-4), cpp (= 4:10.2.1-1), cpp-10 (= 10.2.1-6), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.76), debhelper (= 13.3.4), debianutils (= 4.11.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.2.1-6), gcc (= 4:10.2.1-1), gcc-10 (= 10.2.1-6), gcc-10-base (= 10.2.1-6), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.6-1), groff-base (= 1.22.4-6), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.1-6), libatomic1 (= 10.2.1-6), libattr1 (= 1:2.4.48-6), libaudit-common (= 1:3.0-2), libaudit1 (= 1:3.0-2), libbinutils (= 2.35.2-2), libblkid1 (= 2.36.1-7), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-12), libc-dev-bin (= 2.31-12), libc6 (= 2.31-12), libc6-dev (= 2.31-12), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.1-6), libcom-err2 (= 1.46.2-1), libcrypt-dev (= 1:4.4.18-4), libcrypt1 (= 1:4.4.18-4), libctf-nobfd0 (= 2.35.2-2), libctf0 (= 2.35.2-2), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.259), libdebhelper-perl (= 13.3.4), libdpkg-perl (= 1.20.9), libelf1 (= 0.183-3), libfile-stripnondeterminism-perl (= 1.12.0-1), libgcc-10-dev (= 10.2.1-6), libgcc-s1 (= 10.2.1-6), libgcrypt20 (= 1.8.7-6), libgdbm-compat4 (= 1.19-2), libgdbm6 (= 1.19-2), libgmp10 (= 2:6.2.1+dfsg-1), libgomp1 (= 10.2.1-6), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-5), libicu67 (= 67.1-6), libisl23 (= 0.23-1), libitm1 (= 10.2.1-6), libk5crypto3 (= 1.18.3-5), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-5), libkrb5support0 (= 1.18.3-5), liblsan0 (= 10.2.1-6), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-7), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libpam-modules (= 1.4.0-7), libpam-modules-bin (= 1.4.0-7), libpam-runtime (= 1.4.0-7), libpam0g (= 1.4.0-7), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-4), libpipeline1 (= 1.5.3-1), libseccomp2 (= 2.5.1-1), libselinux1 (= 3.1-3), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.36.1-7), libssl1.1 (= 1.1.1k-1), libstdc++-10-dev (= 10.2.1-6), libstdc++6 (= 10.2.1-6), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.3-5), libtinfo6 (= 6.2+20201114-2), libtirpc-common (= 1.3.1-1), libtirpc-dev (= 1.3.1-1), libtirpc3 (= 1.3.1-1), libtool (= 2.4.6-15), libtsan0 (= 10.2.1-6), libubsan1 (= 10.2.1-6), libuchardet0 (= 0.0.7-1), libudev1 (= 247.3-5), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-7), libxml2 (= 2.9.10+dfsg-6.7), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.10.40-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), patch (= 2.7.6-7), perl (= 5.32.1-4), perl-base (= 5.32.1-4), perl-modules-5.32 (= 5.32.1-4), po-debconf (= 1.0.21+nmu1), sed (= 4.7-1), sensible-utils (= 0.0.14), sysvinit-utils (= 2.96-7), tar (= 1.34+dfsg-1), util-linux (= 2.36.1-7), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587190819" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ idba-dbgsym_1.1.3-7_i386.deb ---------------------------- new Debian package, version 2.0. size 9960704 bytes: control archive=736 bytes. 482 bytes, 12 lines control 503 bytes, 5 lines md5sums Package: idba-dbgsym Source: idba Version: 1.1.3-7 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 10176 Depends: idba (= 1.1.3-7) Section: debug Priority: optional Description: debug symbols for idba Build-Ids: 05dd656bf3673dcfcc5ccb612ded0fabfba35b41 74dafd887c797fe607cddfcdabf3ce4c24e9f980 792963aa9bec76c64891c661fee59aa0142afc8f f80943ce2467d9c30857c5de4363df5e2d23f7c4 drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/05/ -rw-r--r-- root/root 2468672 2020-04-18 06:20 ./usr/lib/debug/.build-id/05/dd656bf3673dcfcc5ccb612ded0fabfba35b41.debug drwxr-xr-x root/root 0 2020-04-18 06:20 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./usr/lib/debug/.build-id/ef/ed4f56908174b7c12ceb622208b3bcea31c765.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.build-id/f4/ -rw-r--r-- root/root 439340 2020-04-18 06:20 ./usr/lib/debug/.build-id/f4/0a0a8272af249e52e518766bd54e21cc4e0812.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/debug/.dwz/i386-linux-gnu/ -rw-r--r-- root/root 638680 2020-04-18 06:20 ./usr/lib/debug/.dwz/i386-linux-gnu/idba-extra.debug drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra-dbgsym -> idba-extra idba-extra_1.1.3-7_i386.deb --------------------------- new Debian package, version 2.0. size 419944 bytes: control archive=1876 bytes. 1470 bytes, 30 lines control 1765 bytes, 30 lines md5sums Package: idba-extra Source: idba Version: 1.1.3-7 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 2484 Depends: libc6 (>= 2.29), libgcc-s1 (>= 7), libgomp1 (>= 6), libstdc++6 (>= 5.2), python3, idba Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers (extra tools) IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. . This package ships extra tools for using idba in specific situations. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 46732 2020-04-18 06:20 ./usr/bin/fa2fq -rwxr-xr-x root/root 50772 2020-04-18 06:20 ./usr/bin/filter_blat -rwxr-xr-x root/root 46736 2020-04-18 06:20 ./usr/bin/filter_contigs -rwxr-xr-x root/root 50828 2020-04-18 06:20 ./usr/bin/fq2fa -rwxr-xr-x root/root 75412 2020-04-18 06:20 ./usr/bin/parallel_blat -rwxr-xr-x root/root 75412 2020-04-18 06:20 ./usr/bin/parallel_rna_blat -rwxr-xr-x root/root 284352 2020-04-18 06:20 ./usr/bin/print_graph -rwxr-xr-x root/root 71312 2020-04-18 06:20 ./usr/bin/raw_n50 -rwxr-xr-x root/root 83628 2020-04-18 06:20 ./usr/bin/sample_reads -rwxr-xr-x root/root 598812 2020-04-18 06:20 ./usr/bin/scaffold -rwxr-xr-x root/root 75404 2020-04-18 06:20 ./usr/bin/shuffle_reads -rwxr-xr-x root/root 83628 2020-04-18 06:20 ./usr/bin/sim_reads -rwxr-xr-x root/root 83628 2020-04-18 06:20 ./usr/bin/sim_reads_tran -rwxr-xr-x root/root 67156 2020-04-18 06:20 ./usr/bin/sort_psl -rwxr-xr-x root/root 79500 2020-04-18 06:20 ./usr/bin/sort_reads -rwxr-xr-x root/root 46732 2020-04-18 06:20 ./usr/bin/split_fa -rwxr-xr-x root/root 46732 2020-04-18 06:20 ./usr/bin/split_fq -rwxr-xr-x root/root 59020 2020-04-18 06:20 ./usr/bin/split_scaffold -rwxr-xr-x root/root 124556 2020-04-18 06:20 ./usr/bin/validate_component -rwxr-xr-x root/root 116364 2020-04-18 06:20 ./usr/bin/validate_contigs_blat -rwxr-xr-x root/root 116392 2020-04-18 06:20 ./usr/bin/validate_contigs_mummer -rwxr-xr-x root/root 116364 2020-04-18 06:20 ./usr/bin/validate_reads_blat -rwxr-xr-x root/root 116364 2020-04-18 06:20 ./usr/bin/validate_rna drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba-extra/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba-extra/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba-extra/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 416 2020-04-18 06:20 ./usr/share/man/man1/filter_blat.1.gz -rw-r--r-- root/root 438 2020-04-18 06:20 ./usr/share/man/man1/filter_contigs.1.gz -rw-r--r-- root/root 426 2020-04-18 06:20 ./usr/share/man/man1/fq2fa.1.gz -rw-r--r-- root/root 483 2020-04-18 06:20 ./usr/share/man/man1/sim_reads.1.gz -rw-r--r-- root/root 460 2020-04-18 06:20 ./usr/share/man/man1/sim_reads_tran.1.gz idba_1.1.3-7_i386.deb --------------------- new Debian package, version 2.0. size 682640 bytes: control archive=1688 bytes. 1357 bytes, 27 lines control 1599 bytes, 23 lines md5sums Package: idba Version: 1.1.3-7 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 4238 Depends: libc6 (>= 2.29), libgcc-s1 (>= 7), libgomp1 (>= 6), libstdc++6 (>= 5.2), python3 Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. drwxr-xr-x root/root 0 2020-04-18 06:20 ./ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/bin/ -rwxr-xr-x root/root 652056 2020-04-18 06:20 ./usr/bin/idba -rwxr-xr-x root/root 754456 2020-04-18 06:20 ./usr/bin/idba_hybrid -rwxr-xr-x root/root 661180 2020-04-18 06:20 ./usr/bin/idba_tran -rwxr-xr-x root/root 742168 2020-04-18 06:20 ./usr/bin/idba_ud drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/lib/idba/ -rwxr-xr-x root/root 4144 2020-04-18 06:20 ./usr/lib/idba/scan.py -rwxr-xr-x root/root 301 2020-04-18 06:20 ./usr/lib/idba/validate_blat -rwxr-xr-x root/root 223 2020-04-18 06:20 ./usr/lib/idba/validate_blat_parallel drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/ -rw-r--r-- root/root 1735 2020-04-18 06:20 ./usr/share/doc/idba/changelog.Debian.gz -rw-r--r-- root/root 2585 2020-04-18 06:20 ./usr/share/doc/idba/copyright drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ -rw-r--r-- root/root 1015 2020-04-18 06:20 ./usr/share/doc/idba/examples/README -rw-r--r-- root/root 719 2020-04-18 06:20 ./usr/share/doc/idba/examples/data-source.sh drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ -rw-r--r-- root/root 10750 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_ref.fa -rw-r--r-- root/root 5085 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/ecoli_target.fa -rw-r--r-- root/root 10732 2020-04-18 06:20 ./usr/share/doc/idba/examples/hybrid/efergusonii_ref.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/ -rw-r--r-- root/root 565135 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa -rw-r--r-- root/root 886740 2020-04-18 06:20 ./usr/share/doc/idba/examples/tran/found-transcripts.fa.list drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/ -rw-r--r-- root/root 5072 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/220668.fa -rw-r--r-- root/root 5098 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/321956.fa -rw-r--r-- root/root 5084 2020-04-18 06:20 ./usr/share/doc/idba/examples/ud/557433.fa drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-18 06:20 ./usr/share/man/man1/ -rw-r--r-- root/root 813 2020-04-18 06:20 ./usr/share/man/man1/idba.1.gz -rw-r--r-- root/root 941 2020-04-18 06:20 ./usr/share/man/man1/idba_hybrid.1.gz -rw-r--r-- root/root 856 2020-04-18 06:20 ./usr/share/man/man1/idba_tran.1.gz -rw-r--r-- root/root 905 2020-04-18 06:20 ./usr/share/man/man1/idba_ud.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [557 B] Get:5 copy:/<>/apt_archive ./ Packages [619 B] Fetched 2139 B in 0s (50.0 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:i386 t1utils unzip 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded. 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http://mirror.einval.org/debian sid/main arm64 libsereal-decoder-perl arm64 4.018+ds-1+b1 [95.3 kB] Get:73 http://mirror.einval.org/debian sid/main arm64 libsereal-encoder-perl arm64 4.018+ds-1+b1 [98.3 kB] Get:74 http://mirror.einval.org/debian sid/main arm64 libtext-levenshteinxs-perl arm64 0.03-4+b8 [8680 B] Get:75 http://mirror.einval.org/debian sid/main arm64 libtext-markdown-discount-perl arm64 0.12-1+b1 [12.9 kB] Get:76 http://mirror.einval.org/debian sid/main arm64 libtext-xslate-perl arm64 3.5.8-1+b1 [195 kB] Get:77 http://mirror.einval.org/debian sid/main arm64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:78 http://mirror.einval.org/debian sid/main arm64 libtime-moment-perl arm64 0.44-1+b3 [75.1 kB] Get:79 http://mirror.einval.org/debian sid/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:80 http://mirror.einval.org/debian sid/main arm64 libtype-tiny-perl all 1.012002-1 [351 kB] Get:81 http://mirror.einval.org/debian sid/main arm64 libunicode-utf8-perl arm64 0.62-1+b2 [19.8 kB] Get:82 http://mirror.einval.org/debian sid/main arm64 liburi-perl all 5.08-1 [90.6 kB] Get:83 http://mirror.einval.org/debian sid/main arm64 libyaml-0-2 arm64 0.2.2-1 [45.1 kB] Get:84 http://mirror.einval.org/debian sid/main arm64 libyaml-libyaml-perl arm64 0.82+repack-1+b1 [34.5 kB] Get:85 http://mirror.einval.org/debian sid/main arm64 lzip arm64 1.22-3 [84.7 kB] Get:86 http://mirror.einval.org/debian sid/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:87 http://mirror.einval.org/debian sid/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:88 http://mirror.einval.org/debian sid/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:89 http://mirror.einval.org/debian sid/main arm64 unzip arm64 6.0-26 [165 kB] Get:90 http://mirror.einval.org/debian sid/main arm64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7453 kB in 1s (8566 kB/s) Selecting previously unselected package readline-common. (Reading database ... 18439 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.1-2_all.deb ... Unpacking readline-common (8.1-2) ... Selecting previously unselected package libreadline8:arm64. Preparing to unpack .../01-libreadline8_8.1-2_arm64.deb ... Unpacking libreadline8:arm64 (8.1-2) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.64-1_arm64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../03-libassuan0_2.5.4-1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.4-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.27-2_arm64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../05-libsqlite3-0_3.34.1-3_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.34.1-3) ... Selecting previously unselected package gpg. 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Setting up libsqlite3-0:arm64 (3.34.1-3) ... Setting up libyaml-libyaml-perl (0.82+repack-1+b1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up liblzo2-2:arm64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b3) ... Setting up libassuan0:arm64 (2.5.4-1) ... Setting up libconfig-tiny-perl (2.26-1) ... Setting up libsereal-encoder-perl (4.018+ds-1+b1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libsub-install-perl (0.928-1.1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1.1) ... Setting up lzip (1.22-3) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b3) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up liblist-moreutils-xs-perl (0.430-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl (0.59-2+b1) ... Setting up libpath-tiny-perl (0.118-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b7) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up readline-common (8.1-2) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:arm64 (2.2.6-1) ... Setting up liburi-perl (5.08-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:arm64 (8.1-2) ... Setting up libtype-tiny-perl (1.012002-1) ... Setting up libtext-markdown-discount-perl:arm64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up gpgconf (2.2.27-2) ... Setting up gpg (2.2.27-2) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-12) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 277340 Build-Time: 637 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 58 Job: idba_1.1.3-7 Lintian: pass Machine Architecture: arm64 Package: idba Package-Time: 724 Source-Version: 1.1.3-7 Space: 277340 Status: successful Version: 1.1.3-7 -------------------------------------------------------------------------------- Finished at 2021-06-06T10:36:01Z Build needed 00:12:04, 277340k disk space