sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | idba 1.1.3-8 (armel) Tue, 09 May 2023 22:53:21 +0000 | +==============================================================================+ Package: idba Version: 1.1.3-8 Source Version: 1.1.3-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-e47d78ec-7b0d-42f2-832f-7cd11b09032a' with '<>' I: NOTICE: Log filtering will replace 'build/idba-LF2zys/resolver-iriAvY' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian sid InRelease Get:2 http://localhost:3142/debian sid/main armel Packages [8992 kB] Fetched 8992 kB in 1s (8889 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'idba' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/idba.git Please use: git clone https://salsa.debian.org/med-team/idba.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 711 kB of source archives. Get:1 http://localhost:3142/debian sid/main idba 1.1.3-8 (dsc) [2022 B] Get:2 http://localhost:3142/debian sid/main idba 1.1.3-8 (tar) [446 kB] Get:3 http://localhost:3142/debian sid/main idba 1.1.3-8 (diff) [263 kB] Fetched 711 kB in 0s (13.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/idba-LF2zys/idba-1.1.3' with '<>' I: NOTICE: Log filtering will replace 'build/idba-LF2zys' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [426 B] Get:5 copy:/<>/apt_archive ./ Packages [490 B] Fetched 1873 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel libnss-nis:armel libnss-nisplus:armel manpages-dev:armel krb5-doc:armel krb5-user:armel libstdc++-11-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:armel libarchive-cpio-perl krb5-locales:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils cpp-12-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-11-base:armel gcc-12-arm-linux-gnueabi gcc-12-arm-linux-gnueabi-base gcc-12-base:armel gcc-12-cross-base gcc-arm-linux-gnueabi gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:armel libasan8-armel-cross libatomic1:armel libatomic1-armel-cross libc6:armel libc6-armel-cross libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:armel libcrypt1:armel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:armel libgcc-12-dev-armel-cross libgcc-s1:armel libgcc-s1-armel-cross libgomp1:armel libgomp1-armel-cross libgssapi-krb5-2:armel libicu72 libio-string-perl libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:armel libnsl2:armel libpipeline1 libssl3:armel libstdc++-11-dev:armel libstdc++-12-dev-armel-cross libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libtirpc-dev:armel libtirpc3:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:armel sensible-utils ucf 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 82.5 MB of archives. After this operation, 321 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [916 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.44-3 [104 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.44-3 [42.5 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-12 [160 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-10 [916 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-2 [1386 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-3 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-12 [495 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabi amd64 2.40-2 [3232 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi-base amd64 12.2.0-14cross1 [37.7 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-arm-linux-gnueabi amd64 12.2.0-14cross1 [8665 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabi amd64 4:12.2.0-3 [3980 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-14cross1 [33.2 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-armel-cross all 2.36-8cross1 [883 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-armel-cross all 12.2.0-14cross1 [38.4 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-armel-cross all 12.2.0-14cross1 [96.6 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-armel-cross all 12.2.0-14cross1 [8856 B] Get:29 http://localhost:3142/debian sid/main amd64 libasan8-armel-cross all 12.2.0-14cross1 [2093 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-armel-cross all 12.2.0-14cross1 [464 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-armel-cross all 12.2.0-14cross1 [862 kB] Get:32 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-armel-cross all 12.2.0-14cross1 [735 kB] Get:33 http://localhost:3142/debian sid/main amd64 gcc-12-arm-linux-gnueabi amd64 12.2.0-14cross1 [17.0 MB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabi amd64 4:12.2.0-3 [1472 B] Get:35 http://localhost:3142/debian sid/main amd64 linux-libc-dev-armel-cross all 6.1.4-1cross1 [1801 kB] Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armel-cross all 2.36-8cross1 [1285 kB] Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-armel-cross all 12.2.0-14cross1 [2033 kB] Get:38 http://localhost:3142/debian sid/main amd64 g++-12-arm-linux-gnueabi amd64 12.2.0-14cross1 [9594 kB] Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabi amd64 4:12.2.0-3 [1176 B] Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:42 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armel all 12.9 [6704 B] Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:63 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-12 [1300 kB] Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.4 [942 kB] Get:69 http://localhost:3142/debian sid/main armel gcc-11-base armel 11.3.0-13 [38.9 kB] Get:70 http://localhost:3142/debian sid/main armel gcc-12-base armel 12.2.0-14 [37.5 kB] Get:71 http://localhost:3142/debian sid/main armel libgcc-s1 armel 12.2.0-14 [38.4 kB] Get:72 http://localhost:3142/debian sid/main armel libc6 armel 2.36-9 [2142 kB] Get:73 http://localhost:3142/debian sid/main armel libasan6 armel 11.3.0-13 [1944 kB] Get:74 http://localhost:3142/debian sid/main armel libatomic1 armel 12.2.0-14 [9160 B] Get:75 http://localhost:3142/debian sid/main armel linux-libc-dev armel 6.1.27-1 [1737 kB] Get:76 http://localhost:3142/debian sid/main armel libcrypt1 armel 1:4.4.33-2 [95.9 kB] Get:77 http://localhost:3142/debian sid/main armel libcrypt-dev armel 1:4.4.33-2 [126 kB] Get:78 http://localhost:3142/debian sid/main armel libcom-err2 armel 1.47.0-2 [19.1 kB] Get:79 http://localhost:3142/debian sid/main armel libkrb5support0 armel 1.20.1-1+b1 [29.4 kB] Get:80 http://localhost:3142/debian sid/main armel libk5crypto3 armel 1.20.1-1+b1 [74.3 kB] Get:81 http://localhost:3142/debian sid/main armel libkeyutils1 armel 1.6.3-2 [7864 B] Get:82 http://localhost:3142/debian sid/main armel libssl3 armel 3.0.8-1 [1624 kB] Get:83 http://localhost:3142/debian sid/main armel libkrb5-3 armel 1.20.1-1+b1 [284 kB] Get:84 http://localhost:3142/debian sid/main armel libgssapi-krb5-2 armel 1.20.1-1+b1 [110 kB] Get:85 http://localhost:3142/debian sid/main armel libtirpc3 armel 1.3.3+ds-1 [72.0 kB] Get:86 http://localhost:3142/debian sid/main armel libnsl2 armel 1.3.0-2 [33.0 kB] Get:87 http://localhost:3142/debian sid/main armel libtirpc-dev armel 1.3.3+ds-1 [182 kB] Get:88 http://localhost:3142/debian sid/main armel libnsl-dev armel 1.3.0-2 [61.7 kB] Get:89 http://localhost:3142/debian sid/main armel libc6-dev armel 2.36-9 [1289 kB] Get:90 http://localhost:3142/debian sid/main armel libgomp1 armel 12.2.0-14 [99.1 kB] Get:91 http://localhost:3142/debian sid/main armel libstdc++6 armel 12.2.0-14 [506 kB] Get:92 http://localhost:3142/debian sid/main armel libubsan1 armel 12.2.0-14 [863 kB] Get:93 http://localhost:3142/debian sid/main armel libgcc-11-dev armel 11.3.0-13 [702 kB] Get:94 http://localhost:3142/debian sid/main armel libstdc++-11-dev armel 11.3.0-13 [1977 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 82.5 MB in 0s (180 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15279 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... 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Preparing to unpack .../73-linux-libc-dev_6.1.27-1_armel.deb ... Unpacking linux-libc-dev:armel (6.1.27-1) ... Selecting previously unselected package libcrypt1:armel. Preparing to unpack .../74-libcrypt1_1%3a4.4.33-2_armel.deb ... Unpacking libcrypt1:armel (1:4.4.33-2) ... Selecting previously unselected package libcrypt-dev:armel. Preparing to unpack .../75-libcrypt-dev_1%3a4.4.33-2_armel.deb ... Unpacking libcrypt-dev:armel (1:4.4.33-2) ... Selecting previously unselected package libcom-err2:armel. Preparing to unpack .../76-libcom-err2_1.47.0-2_armel.deb ... Unpacking libcom-err2:armel (1.47.0-2) ... Selecting previously unselected package libkrb5support0:armel. Preparing to unpack .../77-libkrb5support0_1.20.1-1+b1_armel.deb ... Unpacking libkrb5support0:armel (1.20.1-1+b1) ... Selecting previously unselected package libk5crypto3:armel. Preparing to unpack .../78-libk5crypto3_1.20.1-1+b1_armel.deb ... Unpacking libk5crypto3:armel (1.20.1-1+b1) ... 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libmagic1:amd64 (1:5.44-3) ... Setting up linux-libc-dev:armel (6.1.27-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up linux-libc-dev-armel-cross (6.1.4-1cross1) ... Setting up gcc-12-base:armel (12.2.0-14) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up libc6-armel-cross (2.36-8cross1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up gcc-12-arm-linux-gnueabi-base:amd64 (12.2.0-14cross1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libc6-dev-armel-cross (2.36-8cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up cpp-12-arm-linux-gnueabi (12.2.0-14cross1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libgomp1-armel-cross (12.2.0-14cross1) ... Setting up libtool (2.4.7-5) ... Setting up libgcc-s1-armel-cross (12.2.0-14cross1) ... Setting up libstdc++6-armel-cross (12.2.0-14cross1) ... Setting up libatomic1-armel-cross (12.2.0-14cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-arm-linux-gnueabi (4:12.2.0-3) ... Setting up libubsan1-armel-cross (12.2.0-14cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libasan8-armel-cross (12.2.0-14cross1) ... Setting up libgcc-12-dev-armel-cross (12.2.0-14cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-12-arm-linux-gnueabi (12.2.0-14cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-arm-linux-gnueabi (4:12.2.0-3) ... Setting up libstdc++-12-dev-armel-cross (12.2.0-14cross1) ... Setting up debhelper (13.11.4) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-12-arm-linux-gnueabi (12.2.0-14cross1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-arm-linux-gnueabi (4:12.2.0-3) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-armel (12.9) ... Setting up libgcc-s1:armel (12.2.0-14) ... Setting up libc6:armel (2.36-9) ... Setting up libstdc++6:armel (12.2.0-14) ... Setting up libkeyutils1:armel (1.6.3-2) ... Setting up libcrypt1:armel (1:4.4.33-2) ... Setting up libcom-err2:armel (1.47.0-2) ... Setting up libgomp1:armel (12.2.0-14) ... Setting up libasan6:armel (11.3.0-13) ... Setting up libkrb5support0:armel (1.20.1-1+b1) ... Setting up libatomic1:armel (12.2.0-14) ... Setting up libk5crypto3:armel (1.20.1-1+b1) ... Setting up libubsan1:armel (12.2.0-14) ... Setting up libgcc-11-dev:armel (11.3.0-13) ... Setting up libcrypt-dev:armel (1:4.4.33-2) ... Setting up libssl3:armel (3.0.8-1) ... Setting up libkrb5-3:armel (1.20.1-1+b1) ... Setting up libgssapi-krb5-2:armel (1.20.1-1+b1) ... Setting up libtirpc3:armel (1.3.3+ds-1) ... Setting up libtirpc-dev:armel (1.3.3+ds-1) ... Setting up libnsl2:armel (1.3.0-2) ... Setting up libnsl-dev:armel (1.3.0-2) ... Setting up libc6-dev:armel (2.36-9) ... Setting up libstdc++-11-dev:armel (11.3.0-13) ... Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) amd64 (x86_64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.21 g++-11_11.3.0-13 g++-12_12.2.0-14 gcc-11_11.3.0-13 gcc-12_12.2.0-14 libc6-dev_2.36-9 libstdc++-11-dev_11.3.0-13 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-armel-cross_12.2.0-14cross1 libstdc++6_12.2.0-14 libstdc++6-armel-cross_12.2.0-14cross1 linux-libc-dev_6.1.27-1 Package versions: adduser_3.132 apt_2.6.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_12.4 base-passwd_3.6.1 bash_5.2.15-2+b2 binutils_2.40-2 binutils-arm-linux-gnueabi_2.40-2 binutils-common_2.40-2 binutils-x86-64-linux-gnu_2.40-2 bsdextrautils_2.38.1-5+b1 bsdutils_1:2.38.1-5+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-11_11.3.0-13 cpp-12_12.2.0-14 cpp-12-arm-linux-gnueabi_12.2.0-14cross1 cpp-arm-linux-gnueabi_4:12.2.0-3 cross-config_2.6.20 crossbuild-essential-armel_12.9 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2023.3 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.21 dpkg-cross_2.6.20 dpkg-dev_1.21.21 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3 g++-11_11.3.0-13 g++-12_12.2.0-14 g++-12-arm-linux-gnueabi_12.2.0-14cross1 g++-arm-linux-gnueabi_4:12.2.0-3 gcc_4:12.2.0-3 gcc-11_11.3.0-13 gcc-11-base_11.3.0-13 gcc-12_12.2.0-14 gcc-12-arm-linux-gnueabi_12.2.0-14cross1 gcc-12-arm-linux-gnueabi-base_12.2.0-14cross1 gcc-12-base_12.2.0-14 gcc-12-cross-base_12.2.0-14cross1 gcc-9-base_9.5.0-3 gcc-arm-linux-gnueabi_4:12.2.0-3 gettext_0.21-12 gettext-base_0.21-12 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.6.0 libarchive-zip-perl_1.68-1 libasan6_11.3.0-13 libasan8_12.2.0-14 libasan8-armel-cross_12.2.0-14cross1 libatomic1_12.2.0-14 libatomic1-armel-cross_12.2.0-14cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.0.9-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2 libblkid1_2.38.1-5+b1 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-9 libc-dev-bin_2.36-9 libc6_2.36-9 libc6-armel-cross_2.36-8cross1 libc6-dev_2.36-9 libc6-dev-armel-cross_2.36-8cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-3 libcc1-0_12.2.0-14 libcom-err2_1.47.0-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2 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liblsan0_12.2.0-14 liblz4-1_1.9.4-1 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-5+b1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-6 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libquadmath0_12.2.0-14 libseccomp2_2.5.4-1+b3 libselinux1_3.4-1+b5 libsemanage-common_3.4-1 libsemanage2_3.4-1+b5 libsepol2_3.4-2 libsmartcols1_2.38.1-5+b1 libss2_1.47.0-2 libssl3_3.0.8-1 libstdc++-11-dev_11.3.0-13 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-armel-cross_12.2.0-14cross1 libstdc++6_12.2.0-14 libstdc++6-armel-cross_12.2.0-14cross1 libsub-override-perl_0.09-4 libsystemd0_252.6-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-4 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-13 libtsan2_12.2.0-14 libubsan1_12.2.0-14 libubsan1-armel-cross_12.2.0-14cross1 libuchardet0_0.0.7-1 libudev1_252.6-1 libunistring2_1.0-2 libuuid1_2.38.1-5+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.2 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.27-1 linux-libc-dev-armel-cross_6.1.4-1cross1 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-2 mawk_1.3.4.20200120-3.1 mount_2.38.1-5+b1 ncurses-base_6.4-4 ncurses-bin_6.4-4 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-7 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.17+nmu1 sysvinit-utils_3.06-4 tar_1.34+dfsg-1.2 tzdata_2023c-3 ucf_3.0043+nmu1 usrmerge_35 util-linux_2.38.1-5+b1 util-linux-extra_2.38.1-5+b1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: idba Binary: idba, idba-extra Architecture: any Version: 1.1.3-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/loneknightpy/idba Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/idba Vcs-Git: https://salsa.debian.org/med-team/idba.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libgtest-dev , python3 Package-List: idba deb science optional arch=any idba-extra deb science optional arch=any Checksums-Sha1: cf673154a9696215648177f0bc43b9cc25feaf26 446227 idba_1.1.3.orig.tar.gz 895352f0b6cbf98d8f9fa02df13f9c80807f2fbe 263136 idba_1.1.3-8.debian.tar.xz Checksums-Sha256: 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0 446227 idba_1.1.3.orig.tar.gz 89c37bdd6d8b98b75c81ff5347bf12b53fdc31b97cbb06021aa742636873daef 263136 idba_1.1.3-8.debian.tar.xz Files: 41fe7eabdcfaea677558f3e4baeb2ea8 446227 idba_1.1.3.orig.tar.gz 69a68d8d6501e6ff89cfafeab18e7273 263136 idba_1.1.3-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmNmx/wRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEXzBAAiUIMXUls6FrY7PCQyJh0eeys94UaasPX nl8/9hIx3YQG1VeOd8mevfhF9My5acvFeugBB04UBY2DzwZVlJW2a4Vjq2pGuwWv aRE3PtllhXBYnitNP9DuRkL5D5Qz6S28M6UeAMaMveKYW4jPF7N3kDEd4WgN2n8R 7BGl9SExZHScMPo7XS8fyQPKbybBTpg4y//7M+Z86kkHfNRUXVlAMBaRYW18GAir 86PYAGFz/JxgjqEHP6WQTttAraq0tdVE1tB5uX9oi49J49nnFZMR3BDivzZXRuEb qwVvyQxvWgUKTMm2hwqOlCETtZLhN5Ic9KcXlAzjTNe1zVwsW97n6REDStusBGWm o2+z4Lj61qeDpdn1zWQiGlHPDEsm3ayWu0UgfwSEBYDVZxCVzK1bC1icLgMsRU8P e4+Y0r/bi7bvtzckYVdd/8q+9Ksirlihmc/YVyb3Hv55hdnexzrc8wHr5I+7PL3p YGAblq68cpjrb6kbghFj61QxtRgnUeUpPs1bomwM+Q0mjh+wREyPZ45cAVcCwXWv r6Z5uydp4VEmQWe+DQet3XruN4t39Fh3EvKELD4I24EPMEzk66l0zD/5PSl1+Osr ZpM/7Wp4lw2g69kErKjxiUBOYnjyLGiPQWBqePdoWz/LDC0YxyJnwgcFerWj+KsT j4H+3ptYUfQ= =O32F -----END PGP SIGNATURE----- gpgv: Signature made Sat Nov 5 20:30:52 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./idba_1.1.3-8.dsc: no acceptable signature found dpkg-source: info: extracting idba in /<> dpkg-source: info: unpacking idba_1.1.3.orig.tar.gz dpkg-source: info: unpacking idba_1.1.3-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install_all_idba_flavours.patch dpkg-source: info: applying use-atomic-for-mips.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_debian_packaged_googletest.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-e47d78ec-7b0d-42f2-832f-7cd11b09032a SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package idba dpkg-buildpackage: info: source version 1.1.3-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:7: warning: The macro `AC_CONFIG_HEADER' is obsolete. configure.ac:7: You should run autoupdate. ./lib/autoconf/status.m4:719: AC_CONFIG_HEADER is expanded from... configure.ac:7: the top level configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from... configure.ac:8: the top level configure.ac:30: warning: AC_OUTPUT should be used without arguments. configure.ac:30: You should run autoupdate. configure.ac:8: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:8: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation bin/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') bin/Makefile.am:9: warning: source file '$(top_srcdir)/src/tools/fa2fq.cpp' is in a subdirectory, bin/Makefile.am:9: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. bin/Makefile.am:19: warning: source file '$(top_srcdir)/src/tools/filter_blat.cpp' is in a subdirectory, bin/Makefile.am:19: but option 'subdir-objects' is disabled bin/Makefile.am:17: warning: source file '$(top_srcdir)/src/tools/filter_contigs.cpp' is in a subdirectory, bin/Makefile.am:17: but option 'subdir-objects' is disabled bin/Makefile.am:33: warning: source file '$(top_srcdir)/src/release/filterfa.cpp' is in a subdirectory, bin/Makefile.am:33: but option 'subdir-objects' is disabled bin/Makefile.am:25: warning: source file '$(top_srcdir)/src/release/fq2fa.cpp' is in a subdirectory, bin/Makefile.am:25: but option 'subdir-objects' is disabled bin/Makefile.am:34: warning: source file '$(top_srcdir)/src/release/idba.cpp' is in a subdirectory, bin/Makefile.am:34: but option 'subdir-objects' is disabled bin/Makefile.am:30: warning: source file '$(top_srcdir)/src/release/idba_hybrid.cpp' is in a subdirectory, bin/Makefile.am:30: but option 'subdir-objects' is disabled bin/Makefile.am:29: warning: source file '$(top_srcdir)/src/release/idba_tran.cpp' is in a subdirectory, bin/Makefile.am:29: but option 'subdir-objects' is disabled bin/Makefile.am:13: warning: source file '$(top_srcdir)/src/tools/idba_tran_test.cpp' is in a subdirectory, bin/Makefile.am:13: but option 'subdir-objects' is disabled bin/Makefile.am:27: warning: source file '$(top_srcdir)/src/release/idba_ud.cpp' is in a subdirectory, bin/Makefile.am:27: but option 'subdir-objects' is disabled bin/Makefile.am:31: warning: source file '$(top_srcdir)/src/release/parallel_blat.cpp' is in a subdirectory, bin/Makefile.am:31: but option 'subdir-objects' is disabled bin/Makefile.am:18: warning: source file '$(top_srcdir)/src/tools/parallel_rna_blat.cpp' is in a subdirectory, bin/Makefile.am:18: but option 'subdir-objects' is disabled bin/Makefile.am:12: warning: source file '$(top_srcdir)/src/tools/print_graph.cpp' is in a subdirectory, bin/Makefile.am:12: but option 'subdir-objects' is disabled bin/Makefile.am:28: warning: source file '$(top_srcdir)/src/release/raw_n50.cpp' is in a subdirectory, bin/Makefile.am:28: but option 'subdir-objects' is disabled bin/Makefile.am:14: warning: source file '$(top_srcdir)/src/tools/sample_reads.cpp' is in a subdirectory, bin/Makefile.am:14: but option 'subdir-objects' is disabled bin/Makefile.am:7: warning: source file '$(top_srcdir)/src/tools/scaffold.cpp' is in a subdirectory, bin/Makefile.am:7: but option 'subdir-objects' is disabled bin/Makefile.am:6: warning: source file '$(top_srcdir)/src/tools/shuffle_reads.cpp' is in a subdirectory, bin/Makefile.am:6: but option 'subdir-objects' is disabled bin/Makefile.am:36: warning: source file '$(top_srcdir)/src/release/sim_reads.cpp' is in a subdirectory, bin/Makefile.am:36: but option 'subdir-objects' is disabled bin/Makefile.am:32: warning: source file '$(top_srcdir)/src/release/sim_reads_tran.cpp' is in a subdirectory, bin/Makefile.am:32: but option 'subdir-objects' is disabled bin/Makefile.am:15: warning: source file '$(top_srcdir)/src/tools/sort_psl.cpp' is in a subdirectory, bin/Makefile.am:15: but option 'subdir-objects' is disabled bin/Makefile.am:16: warning: source file '$(top_srcdir)/src/tools/sort_reads.cpp' is in a subdirectory, bin/Makefile.am:16: but option 'subdir-objects' is disabled bin/Makefile.am:20: warning: source file '$(top_srcdir)/src/tools/split_fa.cpp' is in a subdirectory, bin/Makefile.am:20: but option 'subdir-objects' is disabled bin/Makefile.am:23: warning: source file '$(top_srcdir)/src/tools/split_fq.cpp' is in a subdirectory, bin/Makefile.am:23: but option 'subdir-objects' is disabled bin/Makefile.am:35: warning: source file '$(top_srcdir)/src/release/split_scaffold.cpp' is in a subdirectory, bin/Makefile.am:35: but option 'subdir-objects' is disabled bin/Makefile.am:21: warning: source file '$(top_srcdir)/src/tools/test.cpp' is in a subdirectory, bin/Makefile.am:21: but option 'subdir-objects' is disabled bin/Makefile.am:8: warning: source file '$(top_srcdir)/src/tools/validate_component.cpp' is in a subdirectory, bin/Makefile.am:8: but option 'subdir-objects' is disabled bin/Makefile.am:26: warning: source file '$(top_srcdir)/src/release/validate_contigs_blat.cpp' is in a subdirectory, bin/Makefile.am:26: but option 'subdir-objects' is disabled bin/Makefile.am:11: warning: source file '$(top_srcdir)/src/tools/validate_contigs_mummer.cpp' is in a subdirectory, bin/Makefile.am:11: but option 'subdir-objects' is disabled bin/Makefile.am:22: warning: source file '$(top_srcdir)/src/tools/validate_reads_blat.cpp' is in a subdirectory, bin/Makefile.am:22: but option 'subdir-objects' is disabled bin/Makefile.am:10: warning: source file '$(top_srcdir)/src/tools/validate_rna.cpp' is in a subdirectory, bin/Makefile.am:10: but option 'subdir-objects' is disabled lib/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/basic/math.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/hash_aligner.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/options_description.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/log.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/utils.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/misc/blat_record.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/short_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_reader.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_writer.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence_io.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/sequence/compact_sequence.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/scaffold_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_graph.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/hash_graph_branch_group.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/graph/contig_info.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/local_assembler.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:5: warning: source file '$(top_srcdir)/src/assembly/assembly_utility.cpp' is in a subdirectory, lib/Makefile.am:5: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled lib/Makefile.am:68: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest-all.cc' is in a subdirectory, lib/Makefile.am:68: but option 'subdir-objects' is disabled test/Makefile.am:4: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') test/Makefile.am:11: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:11: warning: source file '$(top_srcdir)/src/test/atomic_integer_unittest.cpp' is in a subdirectory, test/Makefile.am:11: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:8: warning: source file '$(top_srcdir)/src/test/bit_edges_unittest.cpp' is in a subdirectory, test/Makefile.am:8: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:6: warning: source file '$(top_srcdir)/src/test/compact_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:6: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:17: warning: source file '$(top_srcdir)/src/test/hash_map_unittest.cpp' is in a subdirectory, test/Makefile.am:17: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:10: warning: source file '$(top_srcdir)/src/test/hash_set_unittest.cpp' is in a subdirectory, test/Makefile.am:10: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:7: warning: source file '$(top_srcdir)/src/test/hash_table_unittest.cpp' is in a subdirectory, test/Makefile.am:7: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:13: warning: source file '$(top_srcdir)/src/test/histgram_unittest.cpp' is in a subdirectory, test/Makefile.am:13: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:9: warning: source file '$(top_srcdir)/src/test/kmer_unittest.cpp' is in a subdirectory, test/Makefile.am:9: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:14: warning: source file '$(top_srcdir)/src/test/managed_list_unittest.cpp' is in a subdirectory, test/Makefile.am:14: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:15: warning: source file '$(top_srcdir)/src/test/sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:15: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:16: warning: source file '$(top_srcdir)/src/test/short_sequence_unittest.cpp' is in a subdirectory, test/Makefile.am:16: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/gtest_src/gtest/gtest_main.cc' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled test/Makefile.am:12: warning: source file '$(top_srcdir)/src/test/vertex_status_unittest.cpp' is in a subdirectory, test/Makefile.am:12: but option 'subdir-objects' is disabled debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- LDFLAGS="-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" LIBS=" -latomic" ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi "LDFLAGS=-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" "LIBS= -latomic" configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for arm-linux-gnueabi-g++... arm-linux-gnueabi-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether arm-linux-gnueabi-g++ accepts -g... yes checking for arm-linux-gnueabi-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabi-g++... none checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether the compiler supports GNU C... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to enable C11 features... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking dependency style of arm-linux-gnueabi-gcc... none checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for an ANSI C-conforming const... yes checking for working memcmp... no checking for vprintf... yes checking for sqrt... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating bin/Makefile config.status: creating lib/Makefile config.status: creating test/Makefile config.status: creating script/Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in lib make[3]: Entering directory '/<>/lib' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o math.o `test -f '../src/basic/math.cpp' || echo './'`../src/basic/math.cpp In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:60, from /usr/arm-linux-gnueabi/include/c++/12/algorithm:61, from ../src/basic/math.cpp:3: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1802 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1908 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:70, from ../src/basic/math.h:13, from ../src/basic/math.cpp:1: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 439 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1294:21, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:40:31: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:41:9: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1937 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1938 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1939 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1940:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:4820:18, inlined from ‘void GenerateNormalCDFTable(int, int, std::vector&)’ at ../src/basic/math.cpp:41:9: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1854 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_aligner.o `test -f '../src/misc/hash_aligner.cpp' || echo './'`../src/misc/hash_aligner.cpp In file included from ../src/container/hash_map.h:14, from ../src/misc/hash_aligner.h:14, from ../src/misc/hash_aligner.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/functional:49, from ../src/basic/functional.h:13, from ../src/container/hash_map.h:13: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o options_description.o `test -f '../src/misc/options_description.cpp' || echo './'`../src/misc/options_description.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o log.o `test -f '../src/misc/log.cpp' || echo './'`../src/misc/log.cpp ../src/misc/log.cpp: In destructor ‘LogProcess::~LogProcess()’: ../src/misc/log.cpp:78:13: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 78 | throw runtime_error("cannot kill log process"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../src/misc/log.cpp:78:13: note: in C++11 destructors default to ‘noexcept’ ../src/misc/log.cpp: In static member function ‘static void* LogThread::LogThreadFunc(void*)’: ../src/misc/log.cpp:122:14: warning: ignoring return value of ‘ssize_t write(int, const void*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 122 | write(log_thread.out_fd, line, len); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utils.o `test -f '../src/misc/utils.cpp' || echo './'`../src/misc/utils.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blat_record.o `test -f '../src/misc/blat_record.cpp' || echo './'`../src/misc/blat_record.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o short_sequence.o `test -f '../src/sequence/short_sequence.cpp' || echo './'`../src/sequence/short_sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_reader.o `test -f '../src/sequence/sequence_reader.cpp' || echo './'`../src/sequence/sequence_reader.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_writer.o `test -f '../src/sequence/sequence_writer.cpp' || echo './'`../src/sequence/sequence_writer.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence_io.o `test -f '../src/sequence/sequence_io.cpp' || echo './'`../src/sequence/sequence_io.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence.o `test -f '../src/sequence/sequence.cpp' || echo './'`../src/sequence/sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o compact_sequence.o `test -f '../src/sequence/compact_sequence.cpp' || echo './'`../src/sequence/compact_sequence.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph_branch_group.o `test -f '../src/graph/contig_graph_branch_group.cpp' || echo './'`../src/graph/contig_graph_branch_group.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/contig_graph_branch_group.h:15, from ../src/graph/contig_graph_branch_group.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/vector:66, from ../src/graph/contig_graph_branch_group.h:13: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph.o `test -f '../src/graph/hash_graph.cpp' || echo './'`../src/graph/hash_graph.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/graph/hash_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/graph/hash_graph.h:15: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold_graph.o `test -f '../src/graph/scaffold_graph.cpp' || echo './'`../src/graph/scaffold_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/scaffold_graph.h:19, from ../src/graph/scaffold_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/string:48, from /usr/arm-linux-gnueabi/include/c++/12/bits/locale_classes.h:40, from /usr/arm-linux-gnueabi/include/c++/12/bits/ios_base.h:41, from /usr/arm-linux-gnueabi/include/c++/12/ios:42, from /usr/arm-linux-gnueabi/include/c++/12/ostream:38, from /usr/arm-linux-gnueabi/include/c++/12/iostream:39, from ../src/graph/scaffold_graph.h:14: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_graph.o `test -f '../src/graph/contig_graph.cpp' || echo './'`../src/graph/contig_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/graph/contig_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/graph/contig_graph.h:14: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/graph/contig_graph.cpp: In member function ‘void ContigGraph::TopSort(std::deque&, std::deque&)’: ../src/graph/contig_graph.cpp:1391:30: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 1391 | ContigGraphVertexAdaptor end = GetEndVertexAdaptor(component); | ^~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_graph_branch_group.o `test -f '../src/graph/hash_graph_branch_group.cpp' || echo './'`../src/graph/hash_graph_branch_group.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/graph/hash_graph_branch_group.h:14, from ../src/graph/hash_graph_branch_group.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/graph/hash_graph.h:15: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o contig_info.o `test -f '../src/graph/contig_info.cpp' || echo './'`../src/graph/contig_info.cpp arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o local_assembler.o `test -f '../src/assembly/local_assembler.cpp' || echo './'`../src/assembly/local_assembler.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/assembly/local_assembler.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/assembly/assembly_utility.h:17, from ../src/assembly/local_assembler.h:13: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/assembly/local_assembler.cpp: In static member function ‘static void* LocalAssemblerWithReference::LocalAssembleThread(void*)’: ../src/assembly/local_assembler.cpp:488:22: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 488 | bool flag = false; | ^~~~ ../src/assembly/local_assembler.cpp:489:21: warning: variable ‘aligned’ set but not used [-Wunused-but-set-variable] 489 | int aligned[2] = {0}; | ^~~~~~~ arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assembly_utility.o `test -f '../src/assembly/assembly_utility.cpp' || echo './'`../src/assembly/assembly_utility.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/assembly/assembly_utility.cpp:14: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/assembly/assembly_utility.h:17, from ../src/assembly/assembly_utility.cpp:9: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ rm -f libassembly.a ar cru libassembly.a math.o hash_aligner.o options_description.o log.o utils.o blat_record.o short_sequence.o sequence_reader.o sequence_writer.o sequence_io.o sequence.o compact_sequence.o contig_graph_branch_group.o hash_graph.o scaffold_graph.o contig_graph.o hash_graph_branch_group.o contig_info.o local_assembler.o assembly_utility.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabi-ranlib libassembly.a arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest_main.o `test -f '../gtest_src/gtest/gtest_main.cc' || echo './'`../gtest_src/gtest/gtest_main.cc arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gtest-all.o `test -f '../gtest_src/gtest/gtest-all.cc' || echo './'`../gtest_src/gtest/gtest-all.cc In file included from ../gtest_src/gtest/gtest-all.cc:39: ../gtest_src/gtest/gtest.h: In static member function ‘static const char* testing::internal::String::CloneCString(const char*)’: ../gtest_src/gtest/gtest.h:2672:17: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 2672 | return strncpy(dest, src, n); | ^ ../gtest_src/gtest/gtest-all.cc:2155:39: note: length computed here 2155 | NULL : CloneString(c_str, strlen(c_str)); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ rm -f libgtest.a ar cru libgtest.a gtest_main.o gtest-all.o ar: `u' modifier ignored since `D' is the default (see `U') arm-linux-gnueabi-ranlib libgtest.a make[3]: Leaving directory '/<>/lib' Making all in bin make[3]: Entering directory '/<>/bin' arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba.o `test -f '../src/release/idba.cpp' || echo './'`../src/release/idba.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/release/idba.cpp:23: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/release/idba.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba idba.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_ud.o `test -f '../src/release/idba_ud.cpp' || echo './'`../src/release/idba_ud.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_ud.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/release/idba_ud.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_ud idba_ud.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran.o `test -f '../src/release/idba_tran.cpp' || echo './'`../src/release/idba_tran.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_tran.cpp:22: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/release/idba_tran.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void FindIsoforms(ContigGraphPath&, std::deque&, ContigGraph&, std::deque&)’: ../src/release/idba_tran.cpp:241:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 241 | if (flag && path.size() > option.min_transcript) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/release/idba_tran.cpp: In function ‘void Assemble(HashGraph&)’: ../src/release/idba_tran.cpp:523:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 523 | if (transcripts[i].size() >= option.min_transcript) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran idba_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_hybrid.o `test -f '../src/release/idba_hybrid.cpp' || echo './'`../src/release/idba_hybrid.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/release/idba_hybrid.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/release/idba_hybrid.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_hybrid idba_hybrid.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o shuffle_reads.o `test -f '../src/tools/shuffle_reads.cpp' || echo './'`../src/tools/shuffle_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o shuffle_reads shuffle_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scaffold.o `test -f '../src/tools/scaffold.cpp' || echo './'`../src/tools/scaffold.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/tools/scaffold.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/tools/scaffold.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o scaffold scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_component.o `test -f '../src/tools/validate_component.cpp' || echo './'`../src/tools/validate_component.cpp ../src/tools/validate_component.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_component.cpp:141:13: warning: unused variable ‘ref_id’ [-Wunused-variable] 141 | int ref_id = dict[record.ref_name]; | ^~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_component validate_component.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fa2fq.o `test -f '../src/tools/fa2fq.cpp' || echo './'`../src/tools/fa2fq.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fa2fq fa2fq.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_rna.o `test -f '../src/tools/validate_rna.cpp' || echo './'`../src/tools/validate_rna.cpp ../src/tools/validate_rna.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_rna.cpp:396:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 396 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_rna validate_rna.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_mummer.o `test -f '../src/tools/validate_contigs_mummer.cpp' || echo './'`../src/tools/validate_contigs_mummer.cpp ../src/tools/validate_contigs_mummer.cpp: In function ‘int main(int, char**)’: ../src/tools/validate_contigs_mummer.cpp:218:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 218 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:219:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 219 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:220:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 220 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:221:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 221 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ../src/tools/validate_contigs_mummer.cpp:222:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 222 | fgets(line, MaxLine, fcoord); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_mummer validate_contigs_mummer.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_graph.o `test -f '../src/tools/print_graph.cpp' || echo './'`../src/tools/print_graph.cpp In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/tools/print_graph.cpp:9: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/graph/contig_graph.h:14: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o print_graph print_graph.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o idba_tran_test.o `test -f '../src/tools/idba_tran_test.cpp' || echo './'`../src/tools/idba_tran_test.cpp In file included from ../src/container/hash_table.h:23, from ../src/graph/hash_graph.h:22, from ../src/assembly/local_assembler.h:15, from ../src/tools/idba_tran_test.cpp:21: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/bits/refwrap.h:39, from /usr/arm-linux-gnueabi/include/c++/12/deque:65, from ../src/tools/idba_tran_test.cpp:11: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o idba_tran_test idba_tran_test.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sample_reads.o `test -f '../src/tools/sample_reads.cpp' || echo './'`../src/tools/sample_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sample_reads sample_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_psl.o `test -f '../src/tools/sort_psl.cpp' || echo './'`../src/tools/sort_psl.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_psl sort_psl.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sort_reads.o `test -f '../src/tools/sort_reads.cpp' || echo './'`../src/tools/sort_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sort_reads sort_reads.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_contigs.o `test -f '../src/tools/filter_contigs.cpp' || echo './'`../src/tools/filter_contigs.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_contigs filter_contigs.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_rna_blat.o `test -f '../src/tools/parallel_rna_blat.cpp' || echo './'`../src/tools/parallel_rna_blat.cpp ../src/tools/parallel_rna_blat.cpp: In function ‘void CreateFile(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RemoveFile(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void Append(const std::string&, const std::string&)’: ../src/tools/parallel_rna_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/tools/parallel_rna_blat.cpp: In function ‘void RunBlat(const std::string&)’: ../src/tools/parallel_rna_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_rna_blat parallel_rna_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filter_blat.o `test -f '../src/tools/filter_blat.cpp' || echo './'`../src/tools/filter_blat.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filter_blat filter_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fa.o `test -f '../src/tools/split_fa.cpp' || echo './'`../src/tools/split_fa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fa split_fa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test.o `test -f '../src/tools/test.cpp' || echo './'`../src/tools/test.cpp ../src/tools/test.cpp:6:32: warning: extra tokens at end of #include directive 6 | #include "graph/contig_graph.h"; | ^ ../src/tools/test.cpp:7:31: warning: extra tokens at end of #include directive 7 | #include "sequence/sequence.h"; | ^ In file included from ../src/container/hash_map.h:14, from ../src/graph/contig_graph.h:19, from ../src/tools/test.cpp:6: ../src/basic/hash.h:18:26: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 18 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/string:48, from /usr/arm-linux-gnueabi/include/c++/12/bits/locale_classes.h:40, from /usr/arm-linux-gnueabi/include/c++/12/bits/ios_base.h:41, from /usr/arm-linux-gnueabi/include/c++/12/ios:42, from /usr/arm-linux-gnueabi/include/c++/12/ostream:38, from /usr/arm-linux-gnueabi/include/c++/12/iostream:39, from ../src/tools/test.cpp:1: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:25:34: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 25 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:32:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 32 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:39:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 39 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:46:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 46 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:53:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 53 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:60:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 60 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:67:35: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 67 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ ../src/basic/hash.h:74:36: warning: ‘template struct std::unary_function’ is deprecated [-Wdeprecated-declarations] 74 | struct Hash: public std::unary_function | ^~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/12/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o test test.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_reads_blat.o `test -f '../src/tools/validate_reads_blat.cpp' || echo './'`../src/tools/validate_reads_blat.cpp In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:70, from ../src/tools/validate_reads_blat.cpp:16: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 523 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/12/vector:64: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘int main(int, char**)’ at ../src/tools/validate_reads_blat.cpp:71:24: /usr/arm-linux-gnueabi/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1032 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_reads_blat validate_reads_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_fq.o `test -f '../src/tools/split_fq.cpp' || echo './'`../src/tools/split_fq.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_fq split_fq.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fq2fa.o `test -f '../src/release/fq2fa.cpp' || echo './'`../src/release/fq2fa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o fq2fa fq2fa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o validate_contigs_blat.o `test -f '../src/release/validate_contigs_blat.cpp' || echo './'`../src/release/validate_contigs_blat.cpp ../src/release/validate_contigs_blat.cpp: In function ‘int main(int, char**)’: ../src/release/validate_contigs_blat.cpp:388:19: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 388 | fscanf(flist, "%s %lf", buf, &coverage[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o validate_contigs_blat validate_contigs_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o raw_n50.o `test -f '../src/release/raw_n50.cpp' || echo './'`../src/release/raw_n50.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o raw_n50 raw_n50.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parallel_blat.o `test -f '../src/release/parallel_blat.cpp' || echo './'`../src/release/parallel_blat.cpp ../src/release/parallel_blat.cpp: In function ‘void CreateFile(const std::string&)’: ../src/release/parallel_blat.cpp:47:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 47 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RemoveFile(const std::string&)’: ../src/release/parallel_blat.cpp:53:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void Append(const std::string&, const std::string&)’: ../src/release/parallel_blat.cpp:59:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ ../src/release/parallel_blat.cpp: In function ‘void RunBlat(const std::string&)’: ../src/release/parallel_blat.cpp:96:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(cmd.c_str()); | ~~~~~~^~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o parallel_blat parallel_blat.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads_tran.o `test -f '../src/release/sim_reads_tran.cpp' || echo './'`../src/release/sim_reads_tran.cpp ../src/release/sim_reads_tran.cpp: In function ‘int main(int, char**)’: ../src/release/sim_reads_tran.cpp:89:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 89 | fscanf(flist, "%s %lf", buf, &weight[i]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads_tran sim_reads_tran.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o filterfa.o `test -f '../src/release/filterfa.cpp' || echo './'`../src/release/filterfa.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o filterfa filterfa.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o split_scaffold.o `test -f '../src/release/split_scaffold.cpp' || echo './'`../src/release/split_scaffold.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o split_scaffold split_scaffold.o ../lib/libassembly.a -latomic arm-linux-gnueabi-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -I../gtest_src -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sim_reads.o `test -f '../src/release/sim_reads.cpp' || echo './'`../src/release/sim_reads.cpp arm-linux-gnueabi-g++ -Wall -O3 -fopenmp -pthread -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -pthread -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -o sim_reads sim_reads.o ../lib/libassembly.a -latomic make[3]: Leaving directory '/<>/bin' Making all in test make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/test' Making all in script make[3]: Entering directory '/<>/script' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/script' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in lib make[2]: Entering directory '/<>/lib' make[3]: Entering directory '/<>/lib' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/lib' make[2]: Leaving directory '/<>/lib' Making install in bin make[2]: Entering directory '/<>/bin' make[3]: Entering directory '/<>/bin' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c idba idba_ud idba_tran idba_hybrid '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/bin' make[2]: Leaving directory '/<>/bin' Making install in test make[2]: Entering directory '/<>/test' make[3]: Entering directory '/<>/test' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/test' make[2]: Leaving directory '/<>/test' Making install in script make[2]: Entering directory '/<>/script' make[3]: Entering directory '/<>/script' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c scan.py run-unittest.py validate_blat validate_blat_parallel '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/script' make[2]: Leaving directory '/<>/script' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install # for the moment the role of these scripts is totally unknown but they do not seem to be necessary mv debian/idba/usr/bin/*.py debian/idba/usr/lib/idba/ mv debian/idba/usr/bin/validate_blat* debian/idba/usr/lib/idba/ make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/idba/usr/bin/idba contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_ud contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_hybrid contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba/usr/bin/idba_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/raw_n50 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_psl contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_rna_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sample_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_component contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/parallel_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_rna contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads_tran contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sort_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/shuffle_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fq2fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/fa2fq contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/print_graph contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_fa contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/split_scaffold contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/filter_contigs contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/sim_reads contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_reads_blat contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/idba-extra/usr/bin/validate_contigs_mummer contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package idba: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'idba' in '../idba_1.1.3-8_armel.deb'. dpkg-deb: building package 'idba-dbgsym' in '../idba-dbgsym_1.1.3-8_armel.deb'. dpkg-deb: building package 'idba-extra' in '../idba-extra_1.1.3-8_armel.deb'. dpkg-deb: building package 'idba-extra-dbgsym' in '../idba-extra-dbgsym_1.1.3-8_armel.deb'. dpkg-genbuildinfo --build=any -O../idba_1.1.3-8_armel.buildinfo dpkg-genchanges --build=any -O../idba_1.1.3-8_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-05-09T22:56:12Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ idba_1.1.3-8_armel.changes: --------------------------- Format: 1.8 Date: Sat, 05 Nov 2022 21:27:52 +0100 Source: idba Binary: idba idba-dbgsym idba-extra idba-extra-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 1.1.3-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: idba - iterative De Bruijn Graph short read assemblers idba-extra - iterative De Bruijn Graph short read assemblers (extra tools) Changes: idba (1.1.3-8) unstable; urgency=medium . * Fix watch file * Standards-Version: 4.6.1 (routine-update) * debhelper-compat 13 (routine-update) * Fix dh_missingwq Checksums-Sha1: 1c3eb0192349d6c48191bb9dd2774c37804d0636 9874616 idba-dbgsym_1.1.3-8_armel.deb a46c7952d8eadedb06872a64779cb0e4a9c3bd76 7999692 idba-extra-dbgsym_1.1.3-8_armel.deb f8d99e914a2460f168f31de91804ff80314c605a 317408 idba-extra_1.1.3-8_armel.deb 97eee2d63409966b8fd9cb3fe96d421d390160c8 5774 idba_1.1.3-8_armel.buildinfo 65a741cb66757e698ab90049d22996c87c88e84a 579332 idba_1.1.3-8_armel.deb Checksums-Sha256: c65adbf2a3ba606580ee8b89a74ef1103d7598b837bf4387faf275cba7bddac5 9874616 idba-dbgsym_1.1.3-8_armel.deb 3d04c01eb3f55274b0d3f5450be99a56f48115ea24d52797ea81286e11bf5bc4 7999692 idba-extra-dbgsym_1.1.3-8_armel.deb d959c7577bb2d35b599c9c21f42e0466dc25b4a832958d4d0154e7176102b950 317408 idba-extra_1.1.3-8_armel.deb c976bfde39ef4d4190cbb08b2b7cbdd419a529c39475f230d5b2fd1d7b85dc2b 5774 idba_1.1.3-8_armel.buildinfo 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cebd202e1cb956687d91a645e805ffd7 9874616 idba-dbgsym_1.1.3-8_armel.deb 2b67fdd3480953bafe149c9b9045bcdb 7999692 idba-extra-dbgsym_1.1.3-8_armel.deb 12d10e68f574d07b9c4056f19add4ba0 317408 idba-extra_1.1.3-8_armel.deb e14f5b103ff6a1a93706c17ef1c24b25 579332 idba_1.1.3-8_armel.deb Checksums-Sha1: 1c3eb0192349d6c48191bb9dd2774c37804d0636 9874616 idba-dbgsym_1.1.3-8_armel.deb a46c7952d8eadedb06872a64779cb0e4a9c3bd76 7999692 idba-extra-dbgsym_1.1.3-8_armel.deb f8d99e914a2460f168f31de91804ff80314c605a 317408 idba-extra_1.1.3-8_armel.deb 65a741cb66757e698ab90049d22996c87c88e84a 579332 idba_1.1.3-8_armel.deb Checksums-Sha256: c65adbf2a3ba606580ee8b89a74ef1103d7598b837bf4387faf275cba7bddac5 9874616 idba-dbgsym_1.1.3-8_armel.deb 3d04c01eb3f55274b0d3f5450be99a56f48115ea24d52797ea81286e11bf5bc4 7999692 idba-extra-dbgsym_1.1.3-8_armel.deb d959c7577bb2d35b599c9c21f42e0466dc25b4a832958d4d0154e7176102b950 317408 idba-extra_1.1.3-8_armel.deb 07a3507797807a6ed05325fe8966672bbd688233bb05c0b48932d6b0ab207398 579332 idba_1.1.3-8_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 09 May 2023 22:56:12 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-12), autotools-dev (= 20220109.1), base-files (= 12.4), base-passwd (= 3.6.1), bash (= 5.2.15-2+b2), binutils (= 2.40-2), binutils-common (= 2.40-2), binutils-x86-64-linux-gnu (= 2.40-2), bsdextrautils (= 2.38.1-5+b1), bsdutils (= 1:2.38.1-5+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-3), cpp-11 (= 11.3.0-13), cpp-12 (= 12.2.0-14), dash (= 0.5.12-2), debconf (= 1.5.82), debhelper (= 13.11.4), debianutils (= 5.7-0.4), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.21), dpkg-dev (= 1.21.21), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-4), g++ (= 4:12.2.0-3), g++-12 (= 12.2.0-14), gcc (= 4:12.2.0-3), gcc-11 (= 11.3.0-13), gcc-11-base (= 11.3.0-13), gcc-12 (= 12.2.0-14), gcc-12-base (= 12.2.0-14), gettext (= 0.21-12), gettext-base (= 0.21-12), grep (= 3.8-5), groff-base (= 1.22.4-10), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-13), libasan8 (= 12.2.0-14), libatomic1 (= 12.2.0-14), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.0.9-1), libaudit1 (= 1:3.0.9-1), libbinutils (= 2.40-2), libblkid1 (= 2.38.1-5+b1), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.36-9), libc-dev-bin (= 2.36-9), libc6 (= 2.36-9), libc6-dev (= 2.36-9), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-3), libcc1-0 (= 12.2.0-14), libcom-err2 (= 1.47.0-2), libcrypt-dev (= 1:4.4.33-2), libcrypt1 (= 1:4.4.33-2), libctf-nobfd0 (= 2.40-2), libctf0 (= 2.40-2), libdb5.3 (= 5.3.28+dfsg2-1), libdebconfclient0 (= 0.269), libdebhelper-perl (= 13.11.4), libdpkg-perl (= 1.21.21), libelf1 (= 0.188-2.1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.3.0-13), libgcc-12-dev (= 12.2.0-14), libgcc-s1 (= 12.2.0-14), libgcrypt20 (= 1.10.1-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgomp1 (= 12.2.0-14), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.40-2), libgssapi-krb5-2 (= 1.20.1-1+b1), libicu72 (= 72.1-3), libisl23 (= 0.25-1), libitm1 (= 12.2.0-14), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-1+b1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-1+b1), libkrb5support0 (= 1.20.1-1+b1), liblsan0 (= 12.2.0-14), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.1-0.2), libmagic-mgc (= 1:5.44-3), libmagic1 (= 1:5.44-3), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-5+b1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libpam-modules (= 1.5.2-6), libpam-modules-bin (= 1.5.2-6), libpam-runtime (= 1.5.2-6), libpam0g (= 1.5.2-6), libpcre2-8-0 (= 10.42-1), libperl5.36 (= 5.36.0-7), libpipeline1 (= 1.5.7-1), libquadmath0 (= 12.2.0-14), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.4-1+b5), libsmartcols1 (= 2.38.1-5+b1), libssl3 (= 3.0.8-1), libstdc++-12-dev (= 12.2.0-14), libstdc++6 (= 12.2.0-14), libsub-override-perl (= 0.09-4), libsystemd0 (= 252.6-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4-4), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libtsan0 (= 11.3.0-13), libtsan2 (= 12.2.0-14), libubsan1 (= 12.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 252.6-1), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-5+b1), libxml2 (= 2.9.14+dfsg-1.2), libzstd1 (= 1.5.4+dfsg2-5), linux-libc-dev (= 6.1.27-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-3), make (= 4.3-4.1), man-db (= 2.11.2-2), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.4-4), ncurses-bin (= 6.4-4), patch (= 2.7.6-7), perl (= 5.36.0-7), perl-base (= 5.36.0-7), perl-modules-5.36 (= 5.36.0-7), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.17+nmu1), sysvinit-utils (= 3.06-4), tar (= 1.34+dfsg-1.2), usrmerge (= 35), util-linux (= 2.38.1-5+b1), util-linux-extra (= 2.38.1-5+b1), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1667680072" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ idba-dbgsym_1.1.3-8_armel.deb ----------------------------- new Debian package, version 2.0. size 9874616 bytes: control archive=740 bytes. 483 bytes, 12 lines control 506 bytes, 5 lines md5sums Package: idba-dbgsym Source: idba Version: 1.1.3-8 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 10137 Depends: idba (= 1.1.3-8) Section: debug Priority: optional Description: debug symbols for idba Build-Ids: 122656c1030e7215ff1411036dbfe734b7fff009 62b25617eb12e4c47fc8d9b4dc72a01d271d0db3 b6baedbd1ef1eaad835af7cfebc0a123bd29174e f7c45176665aea3fb54f5cd097a7939adc5be9fb drwxr-xr-x root/root 0 2022-11-05 20:27 ./ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/12/ -rw-r--r-- root/root 2385748 2022-11-05 20:27 ./usr/lib/debug/.build-id/12/2656c1030e7215ff1411036dbfe734b7fff009.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/62/ -rw-r--r-- root/root 2287732 2022-11-05 20:27 ./usr/lib/debug/.build-id/62/b25617eb12e4c47fc8d9b4dc72a01d271d0db3.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/b6/ -rw-r--r-- root/root 2001832 2022-11-05 20:27 ./usr/lib/debug/.build-id/b6/baedbd1ef1eaad835af7cfebc0a123bd29174e.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/f7/ -rw-r--r-- root/root 2299480 2022-11-05 20:27 ./usr/lib/debug/.build-id/f7/c45176665aea3fb54f5cd097a7939adc5be9fb.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 1388408 2022-11-05 20:27 ./usr/lib/debug/.dwz/arm-linux-gnueabi/idba.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-11-05 20:27 ./usr/share/doc/idba-dbgsym -> idba idba-extra-dbgsym_1.1.3-8_armel.deb ----------------------------------- new Debian package, version 2.0. size 7999692 bytes: control archive=1644 bytes. 1279 bytes, 12 lines control 2526 bytes, 24 lines md5sums Package: idba-extra-dbgsym Source: idba Version: 1.1.3-8 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 8603 Depends: idba-extra (= 1.1.3-8) Section: debug Priority: optional Description: debug symbols for idba-extra Build-Ids: 0c38af7619c2555d0da4d595a60832f5bae65f32 3379e8736407c014da146491827594b04d22aee5 3c17547edd8f21c8bd50f364477cbc10cc6fa59f 3c66cee9c4d38984f05a9aeb271b004a84a62a16 5d1d885b5dc56b52c5919693232922b0b61776a7 6ae9bbb556e396bf26b8668a4998203d8e28791d 784a042841c554576b9c0b1ecd3d3310e5d07e8d 7884208db7b5264c80697b4622fe0bc2af9bc70a 80615ad3e851e85a883056e355f94e5d0d52d1a2 8c2a31b2da84864edd031f14e6167a1e4288c1b0 8eb862487cf3765aea570443dd5699e1bb003c2e a8082c5e48b8e45baae6a3ae1c2cf59ccda66c60 bb33ca9f7f6ac976601c01eaafcfaf16832e716f bef6c4300d162a4f82a1971ee4e1352ea0f44683 c9f4bd9be96448fc061beaf45b1f0b7e428dbce6 cd4b3d4ce0e75fa4833ba931c51b45f0ca56dc9e cfaf61fc246579ffc6fa486c5f859f9e574952cf 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20:27 ./usr/lib/debug/.build-id/3c/17547edd8f21c8bd50f364477cbc10cc6fa59f.debug -rw-r--r-- root/root 203448 2022-11-05 20:27 ./usr/lib/debug/.build-id/3c/66cee9c4d38984f05a9aeb271b004a84a62a16.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/5d/ -rw-r--r-- root/root 120824 2022-11-05 20:27 ./usr/lib/debug/.build-id/5d/1d885b5dc56b52c5919693232922b0b61776a7.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/6a/ -rw-r--r-- root/root 120816 2022-11-05 20:27 ./usr/lib/debug/.build-id/6a/e9bbb556e396bf26b8668a4998203d8e28791d.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/78/ -rw-r--r-- root/root 119704 2022-11-05 20:27 ./usr/lib/debug/.build-id/78/4a042841c554576b9c0b1ecd3d3310e5d07e8d.debug -rw-r--r-- root/root 209428 2022-11-05 20:27 ./usr/lib/debug/.build-id/78/84208db7b5264c80697b4622fe0bc2af9bc70a.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/80/ -rw-r--r-- root/root 946120 2022-11-05 20:27 ./usr/lib/debug/.build-id/80/615ad3e851e85a883056e355f94e5d0d52d1a2.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/8c/ -rw-r--r-- root/root 205580 2022-11-05 20:27 ./usr/lib/debug/.build-id/8c/2a31b2da84864edd031f14e6167a1e4288c1b0.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/8e/ -rw-r--r-- root/root 124164 2022-11-05 20:27 ./usr/lib/debug/.build-id/8e/b862487cf3765aea570443dd5699e1bb003c2e.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/a8/ -rw-r--r-- root/root 228320 2022-11-05 20:27 ./usr/lib/debug/.build-id/a8/082c5e48b8e45baae6a3ae1c2cf59ccda66c60.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/bb/ -rw-r--r-- root/root 2416596 2022-11-05 20:27 ./usr/lib/debug/.build-id/bb/33ca9f7f6ac976601c01eaafcfaf16832e716f.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/be/ -rw-r--r-- root/root 237964 2022-11-05 20:27 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./usr/lib/debug/.build-id/d3/acb5ba76ff56fad1e3a4110481775dae6092f5.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/d7/ -rw-r--r-- root/root 464720 2022-11-05 20:27 ./usr/lib/debug/.build-id/d7/9c4fd3f84ea4e1aa9e3e6791b7f0dc7c4f9afc.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/e6/ -rw-r--r-- root/root 386804 2022-11-05 20:27 ./usr/lib/debug/.build-id/e6/56946373d138e9176e7e3742204701f93d646c.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/fc/ -rw-r--r-- root/root 209612 2022-11-05 20:27 ./usr/lib/debug/.build-id/fc/8ff17be80539c1e2c32af132f1e9e7d94a5f13.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.build-id/ff/ -rw-r--r-- root/root 318976 2022-11-05 20:27 ./usr/lib/debug/.build-id/ff/42a782a6e1578b09160ea096ceabbbe1f38ffb.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/debug/.dwz/arm-linux-gnueabi/ -rw-r--r-- root/root 705676 2022-11-05 20:27 ./usr/lib/debug/.dwz/arm-linux-gnueabi/idba-extra.debug drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-11-05 20:27 ./usr/share/doc/idba-extra-dbgsym -> idba-extra idba-extra_1.1.3-8_armel.deb ---------------------------- new Debian package, version 2.0. size 317408 bytes: control archive=1872 bytes. 1472 bytes, 30 lines control 1765 bytes, 30 lines md5sums Package: idba-extra Source: idba Version: 1.1.3-8 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 1947 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 11), python3, idba Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers (extra tools) IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. . This package ships extra tools for using idba in specific situations. drwxr-xr-x root/root 0 2022-11-05 20:27 ./ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/bin/ -rwxr-xr-x root/root 38540 2022-11-05 20:27 ./usr/bin/fa2fq -rwxr-xr-x root/root 38484 2022-11-05 20:27 ./usr/bin/filter_blat -rwxr-xr-x root/root 34448 2022-11-05 20:27 ./usr/bin/filter_contigs -rwxr-xr-x root/root 38540 2022-11-05 20:27 ./usr/bin/fq2fa -rwxr-xr-x root/root 59028 2022-11-05 20:27 ./usr/bin/parallel_blat -rwxr-xr-x root/root 59028 2022-11-05 20:27 ./usr/bin/parallel_rna_blat -rwxr-xr-x root/root 218800 2022-11-05 20:27 ./usr/bin/print_graph -rwxr-xr-x root/root 54928 2022-11-05 20:27 ./usr/bin/raw_n50 -rwxr-xr-x root/root 71340 2022-11-05 20:27 ./usr/bin/sample_reads -rwxr-xr-x root/root 471796 2022-11-05 20:27 ./usr/bin/scaffold -rwxr-xr-x root/root 59020 2022-11-05 20:27 ./usr/bin/shuffle_reads -rwxr-xr-x root/root 71340 2022-11-05 20:27 ./usr/bin/sim_reads -rwxr-xr-x root/root 67244 2022-11-05 20:27 ./usr/bin/sim_reads_tran -rwxr-xr-x root/root 46676 2022-11-05 20:27 ./usr/bin/sort_psl -rwxr-xr-x root/root 63116 2022-11-05 20:27 ./usr/bin/sort_reads -rwxr-xr-x root/root 38540 2022-11-05 20:27 ./usr/bin/split_fa -rwxr-xr-x root/root 38540 2022-11-05 20:27 ./usr/bin/split_fq -rwxr-xr-x root/root 46732 2022-11-05 20:27 ./usr/bin/split_scaffold -rwxr-xr-x root/root 91788 2022-11-05 20:27 ./usr/bin/validate_component -rwxr-xr-x root/root 87692 2022-11-05 20:27 ./usr/bin/validate_contigs_blat -rwxr-xr-x root/root 91820 2022-11-05 20:27 ./usr/bin/validate_contigs_mummer -rwxr-xr-x root/root 91788 2022-11-05 20:27 ./usr/bin/validate_reads_blat -rwxr-xr-x root/root 87692 2022-11-05 20:27 ./usr/bin/validate_rna drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba-extra/ -rw-r--r-- root/root 935 2022-11-05 20:27 ./usr/share/doc/idba-extra/changelog.Debian.gz -rw-r--r-- root/root 2585 2022-11-05 20:27 ./usr/share/doc/idba-extra/copyright drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/man/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/man/man1/ -rw-r--r-- root/root 416 2022-11-05 20:27 ./usr/share/man/man1/filter_blat.1.gz -rw-r--r-- root/root 438 2022-11-05 20:27 ./usr/share/man/man1/filter_contigs.1.gz -rw-r--r-- root/root 426 2022-11-05 20:27 ./usr/share/man/man1/fq2fa.1.gz -rw-r--r-- root/root 483 2022-11-05 20:27 ./usr/share/man/man1/sim_reads.1.gz -rw-r--r-- root/root 460 2022-11-05 20:27 ./usr/share/man/man1/sim_reads_tran.1.gz idba_1.1.3-8_armel.deb ---------------------- new Debian package, version 2.0. size 579332 bytes: control archive=1692 bytes. 1359 bytes, 27 lines control 1599 bytes, 23 lines md5sums Package: idba Version: 1.1.3-8 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 3633 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 11), python3 Section: science Priority: optional Homepage: https://github.com/loneknightpy/idba Description: iterative De Bruijn Graph short read assemblers IDBA stands for iterative de Bruijn graph assembler. In computational sequence biology, an assembler solves the puzzle coming from large sequencing machines that feature many gigabytes of short reads from a large genome. . This package provides several flavours of the IDBA assembler, as they all share the same source tree but serve different purposes and evolved over time. . IDBA is the basic iterative de Bruijn graph assembler for second-generation sequencing reads. IDBA-UD, an extension of IDBA, is designed to utilize paired-end reads to assemble low-depth regions and use progressive depth on contigs to reduce errors in high-depth regions. It is a generic purpose assembler and especially good for single-cell and metagenomic sequencing data. IDBA-Hybrid is another update version of IDBA-UD, which can make use of a similar reference genome to improve assembly result. IDBA-Tran is an iterative de Bruijn graph assembler for RNA-Seq data. drwxr-xr-x root/root 0 2022-11-05 20:27 ./ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/bin/ -rwxr-xr-x root/root 512748 2022-11-05 20:27 ./usr/bin/idba -rwxr-xr-x root/root 590572 2022-11-05 20:27 ./usr/bin/idba_hybrid -rwxr-xr-x root/root 505520 2022-11-05 20:27 ./usr/bin/idba_tran -rwxr-xr-x root/root 582380 2022-11-05 20:27 ./usr/bin/idba_ud drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/lib/idba/ -rwxr-xr-x root/root 4144 2022-11-05 20:27 ./usr/lib/idba/scan.py -rwxr-xr-x root/root 301 2022-11-05 20:27 ./usr/lib/idba/validate_blat -rwxr-xr-x root/root 223 2022-11-05 20:27 ./usr/lib/idba/validate_blat_parallel drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba/ -rw-r--r-- root/root 935 2022-11-05 20:27 ./usr/share/doc/idba/changelog.Debian.gz -rw-r--r-- root/root 2585 2022-11-05 20:27 ./usr/share/doc/idba/copyright drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba/examples/ -rw-r--r-- root/root 1015 2022-11-05 20:27 ./usr/share/doc/idba/examples/README -rw-r--r-- root/root 719 2022-11-05 20:27 ./usr/share/doc/idba/examples/data-source.sh drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba/examples/hybrid/ -rw-r--r-- root/root 10750 2022-11-05 20:27 ./usr/share/doc/idba/examples/hybrid/ecoli_ref.fa -rw-r--r-- root/root 5085 2022-11-05 20:27 ./usr/share/doc/idba/examples/hybrid/ecoli_target.fa -rw-r--r-- root/root 10732 2022-11-05 20:27 ./usr/share/doc/idba/examples/hybrid/efergusonii_ref.fa drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba/examples/tran/ -rw-r--r-- root/root 565135 2022-11-05 20:27 ./usr/share/doc/idba/examples/tran/found-transcripts.fa -rw-r--r-- root/root 886740 2022-11-05 20:27 ./usr/share/doc/idba/examples/tran/found-transcripts.fa.list drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/doc/idba/examples/ud/ -rw-r--r-- root/root 5072 2022-11-05 20:27 ./usr/share/doc/idba/examples/ud/220668.fa -rw-r--r-- root/root 5098 2022-11-05 20:27 ./usr/share/doc/idba/examples/ud/321956.fa -rw-r--r-- root/root 5084 2022-11-05 20:27 ./usr/share/doc/idba/examples/ud/557433.fa drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/man/ drwxr-xr-x root/root 0 2022-11-05 20:27 ./usr/share/man/man1/ -rw-r--r-- root/root 813 2022-11-05 20:27 ./usr/share/man/man1/idba.1.gz -rw-r--r-- root/root 941 2022-11-05 20:27 ./usr/share/man/man1/idba_hybrid.1.gz -rw-r--r-- root/root 856 2022-11-05 20:27 ./usr/share/man/man1/idba_tran.1.gz -rw-r--r-- root/root 905 2022-11-05 20:27 ./usr/share/man/man1/idba_ud.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [558 B] Get:5 copy:/<>/apt_archive ./ Packages [621 B] Fetched 2142 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:armel t1utils unzip 0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.8-1 [1407 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-5 [48.5 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:29 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:30 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:31 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:33 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.14-1 [18.1 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.35-1 [131 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:48 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:53 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:57 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:58 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:59 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:60 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:62 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:64 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:65 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:72 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:73 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:74 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:75 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:76 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:77 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:79 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.68-1 [186 kB] Get:80 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:81 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:82 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:83 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:84 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-5 [37.7 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:92 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:93 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:97 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:98 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:100 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:101 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:102 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:104 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:105 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.003+ds-1 [99.5 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.003+ds-1 [102 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:110 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.33-1 [58.4 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.28-1 [28.6 kB] Get:112 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:114 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:117 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:118 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.16-1 [116 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:122 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-5 [61.9 kB] Get:123 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:124 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:125 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:126 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:127 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.7 MB in 0s (154 MB/s) Selecting previously unselected package netbase. (Reading database ... 21112 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.8-1_amd64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-5_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-5) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../006-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package gpgconf. Preparing to unpack .../007-gpgconf_2.2.40-1.1_amd64.deb ... Unpacking gpgconf (2.2.40-1.1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../008-libsqlite3-0_3.40.1-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-2) ... Selecting previously unselected package gpg. Preparing to unpack .../009-gpg_2.2.40-1.1_amd64.deb ... Unpacking gpg (2.2.40-1.1) ... Selecting previously unselected package iso-codes. Preparing to unpack .../010-iso-codes_4.15.0-1_all.deb ... Unpacking iso-codes (4.15.0-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../011-libaliased-perl_0.34-3_all.deb ... Unpacking libaliased-perl (0.34-3) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../012-libapt-pkg-perl_0.1.40+b2_amd64.deb ... Unpacking libapt-pkg-perl (0.1.40+b2) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../013-libb-hooks-op-check-perl_0.22-2+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../014-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../015-libdevel-callchecker-perl_0.008-2_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.008-2) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../016-libparams-classify-perl_0.015-2+b1_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b1) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../018-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../019-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../020-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../021-libvariable-magic-perl_0.63-1+b1_amd64.deb ... Unpacking libvariable-magic-perl (0.63-1+b1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../022-libb-hooks-endofscope-perl_0.26-1_all.deb ... 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Setting up liblz1:amd64 (1.13-5) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up plzip (1.10-5) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.35-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.40.1-2) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.5-5) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libsereal-encoder-perl (5.003+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.33-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.010-1) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.65-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:amd64 (0.26-2+b1) ... Setting up libsyntax-keyword-try-perl (0.28-1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b2) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.8-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.003+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.17-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.68-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.16-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 250992 Build-Time: 153 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 9 Job: idba_1.1.3-8 Lintian: pass Machine Architecture: amd64 Package: idba Package-Time: 171 Source-Version: 1.1.3-8 Space: 250992 Status: successful Version: 1.1.3-8 -------------------------------------------------------------------------------- Finished at 2023-05-09T22:56:12Z Build needed 00:02:51, 250992k disk space