sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | ivar 1.3+dfsg-1 (mipsel) Tue, 15 Dec 2020 16:35:07 +0000 | +==============================================================================+ Package: ivar Version: 1.3+dfsg-1 Source Version: 1.3+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-4089c675-0f28-4116-93d1-29ced02d9181' with '<>' I: NOTICE: Log filtering will replace 'build/ivar-IxfmW6/resolver-Vydfli' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [153 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-12-15-0800.18.pdiff [8707 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-12-15-1400.34.pdiff [22.2 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-12-15-1400.34.pdiff [22.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-12-15-0800.18.pdiff [8225 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-12-15-1400.34.pdiff [27.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-12-15-1400.34.pdiff [27.9 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [8231 kB] Fetched 8508 kB in 2s (5371 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libxxhash0 The following packages will be upgraded: apt libapt-pkg6.0 2 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 2482 kB of archives. After this operation, 55.3 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libxxhash0 amd64 0.8.0-1 [17.7 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg6.0 amd64 2.1.14 [995 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 apt amd64 2.1.14 [1470 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2482 kB in 0s (59.0 MB/s) Selecting previously unselected package libxxhash0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10438 files and directories currently installed.) Preparing to unpack .../libxxhash0_0.8.0-1_amd64.deb ... Unpacking libxxhash0:amd64 (0.8.0-1) ... Setting up libxxhash0:amd64 (0.8.0-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10444 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.14_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.1.14) over (2.1.13) ... Setting up libapt-pkg6.0:amd64 (2.1.14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10444 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.14_amd64.deb ... Unpacking apt (2.1.14) over (2.1.13) ... Setting up apt (2.1.14) ... Processing triggers for libc-bin (2.31-5) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'ivar' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ivar.git Please use: git clone https://salsa.debian.org/med-team/ivar.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 675 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main ivar 1.3+dfsg-1 (dsc) [2036 B] Get:2 http://debian.oregonstate.edu/debian unstable/main ivar 1.3+dfsg-1 (tar) [630 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main ivar 1.3+dfsg-1 (diff) [43.0 kB] Fetched 675 kB in 0s (26.6 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/ivar-IxfmW6/ivar-1.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/ivar-IxfmW6' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 13), libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [407 B] Get:5 copy:/<>/apt_archive ./ Packages [498 B] Fetched 1862 B in 0s (73.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils build-essential cpp-10-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-10-mipsel-linux-gnu gcc-10-mipsel-linux-gnu-base gcc-9-base:mipsel gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbrotli1:mipsel libbz2-1.0:mipsel libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mipsel libdeflate0:mipsel libdpkg-perl libelf1 libffi7:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-mipsel-cross libgcc-9-dev:mipsel libgcc-s1:mipsel libgcc-s1-mipsel-cross libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgomp1-mipsel-cross libgpg-error0:mipsel libgssapi-krb5-2 libgssapi-krb5-2:mipsel libhogweed6:mipsel libhts-dev:mipsel libhts3:mipsel libicu67 libidn2-0:mipsel libio-string-perl libk5crypto3 libk5crypto3:mipsel libkeyutils1 libkeyutils1:mipsel libkrb5-3 libkrb5-3:mipsel libkrb5support0 libkrb5support0:mipsel libldap-2.4-2:mipsel liblocale-gettext-perl liblzma-dev:mipsel liblzma5:mipsel libmagic-mgc libmagic1 libnettle8:mipsel libnghttp2-14:mipsel libnsl-dev libnsl-dev:mipsel libnsl2 libnsl2:mipsel libp11-kit0:mipsel libperl5.32 libpipeline1 libpsl5:mipsel librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libssh2-1:mipsel libssl1.1 libssl1.1:mipsel libstdc++-10-dev libstdc++-10-dev-mipsel-cross libstdc++-9-dev:mipsel libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtasn1-6:mipsel libtirpc-common libtirpc-dev libtirpc-dev:mipsel libtirpc3 libtirpc3:mipsel libtool libuchardet0 libunistring2:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db perl perl-modules-5.32 po-debconf sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-mipsel-linux-gnu gcc-10-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel glibc-doc manpages-dev:mipsel libcurl4-doc:mipsel libgnutls28-dev:mipsel libidn11-dev:mipsel libkrb5-dev:mipsel libldap2-dev:mipsel librtmp-dev:mipsel libssh2-1-dev:mipsel pkg-config:mipsel gnupg git bzr rng-tools:mipsel gnutls-bin:mipsel krb5-doc krb5-user krb5-doc:mipsel krb5-user:mipsel liblzma-doc:mipsel libstdc++-10-doc libstdc++-9-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libnss-nis:mipsel libnss-nisplus:mipsel ca-certificates:mipsel libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:mipsel krb5-locales krb5-locales:mipsel libldap-common:mipsel publicsuffix:mipsel libsasl2-modules:mipsel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils build-essential cpp-10-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-10-base:mipsel gcc-10-cross-base-mipsen gcc-10-mipsel-linux-gnu gcc-10-mipsel-linux-gnu-base gcc-9-base:mipsel gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libbrotli1:mipsel libbz2-1.0:mipsel libc6:mipsel libc6-dev libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mipsel libcrypt1:mipsel libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:mipsel libdeflate0:mipsel libdpkg-perl libelf1 libffi7:mipsel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-mipsel-cross libgcc-9-dev:mipsel libgcc-s1:mipsel libgcc-s1-mipsel-cross libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgomp1-mipsel-cross libgpg-error0:mipsel libgssapi-krb5-2 libgssapi-krb5-2:mipsel libhogweed6:mipsel libhts-dev:mipsel libhts3:mipsel libicu67 libidn2-0:mipsel libio-string-perl libk5crypto3 libk5crypto3:mipsel libkeyutils1 libkeyutils1:mipsel libkrb5-3 libkrb5-3:mipsel libkrb5support0 libkrb5support0:mipsel libldap-2.4-2:mipsel liblocale-gettext-perl liblzma-dev:mipsel liblzma5:mipsel libmagic-mgc libmagic1 libnettle8:mipsel libnghttp2-14:mipsel libnsl-dev libnsl-dev:mipsel libnsl2 libnsl2:mipsel libp11-kit0:mipsel libperl5.32 libpipeline1 libpsl5:mipsel librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libssh2-1:mipsel libssl1.1 libssl1.1:mipsel libstdc++-10-dev libstdc++-10-dev-mipsel-cross libstdc++-9-dev:mipsel libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtasn1-6:mipsel libtirpc-common libtirpc-dev libtirpc-dev:mipsel libtirpc3 libtirpc3:mipsel libtool libuchardet0 libunistring2:mipsel libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db perl perl-modules-5.32 po-debconf sbuild-build-depends-main-dummy:mipsel sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 146 newly installed, 0 to remove and 0 not upgraded. Need to get 143 MB of archives. After this operation, 562 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-2 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.0-6 [2820 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.0-6 [4105 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.0-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-10-base mipsel 10.2.1-1 [201 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-9-base mipsel 9.3.0-19 [198 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-12 [313 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.3-1 [814 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.35.1-4cross3 [2357 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.18.3-4 [65.1 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.18.3-4 [113 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1i-1 [1551 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.18.3-4 [362 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.18.3-4 [165 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-common all 1.2.6-3 [13.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc3 amd64 1.2.6-3 [83.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.2.6-3 [190 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-5 [2342 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.1-1 [1741 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.1-1 [44.7 MB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mipsel-linux-gnu-base amd64 10.2.1-1cross1 [201 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-mipsel-linux-gnu amd64 10.2.1-1cross1 [6985 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:10.2.0-1 [16.9 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10.2.1-1cross1 [197 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.31-2cross1 [1212 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mipsel-cross all 10.2.1-1cross1 [46.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 10.2.1-1cross1 [91.1 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 10.2.1-1cross1 [6648 B] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-mipsel-cross all 10.2.1-1cross1 [244 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-mipsel-linux-gnu amd64 10.2.1-1cross1 [13.6 MB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:10.2.0-1 [1456 B] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 10.2.1-1cross1 [397 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 5.7.10-1cross1 [1237 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.31-2cross1 [2074 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-mipsel-cross all 10.2.1-1cross1 [1749 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-mipsel-linux-gnu amd64 10.2.1-1cross1 [7654 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:10.2.0-1 [1180 B] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-5 [8625 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.3+b1 [693 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.8 [6684 B] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.3 [188 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.182-1 [166 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13+20201015-2 [173 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.3-2 [1366 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.3 [1009 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-s1 mipsel 10.2.1-1 [46.3 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt1 mipsel 1:4.4.17-1 [111 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.31-5 [2416 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 10.2.1-1 [6704 B] Get:98 http://debian.oregonstate.edu/debian unstable/main mipsel libbrotli1 mipsel 1.0.9-2+b2 [282 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mipsel libbz2-1.0 mipsel 1.0.8-4 [46.1 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 5.9.11-1 [1224 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mipsel libcrypt-dev mipsel 1:4.4.17-1 [132 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mipsel libcom-err2 mipsel 1.45.6-1 [71.4 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5support0 mipsel 1.18.3-4 [64.3 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mipsel libk5crypto3 mipsel 1.18.3-4 [118 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mipsel libkeyutils1 mipsel 1.6.1-2 [14.9 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mipsel libssl1.1 mipsel 1.1.1i-1 [1190 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5-3 mipsel 1.18.3-4 [335 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mipsel libgssapi-krb5-2 mipsel 1.18.3-4 [149 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mipsel libtirpc3 mipsel 1.2.6-3 [73.7 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mipsel libnsl2 mipsel 1.3.0-2 [35.2 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mipsel libtirpc-dev mipsel 1.2.6-3 [197 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mipsel libnsl-dev mipsel 1.3.0-2 [69.1 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.31-5 [2009 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mipsel libgmp10 mipsel 2:6.2.1+dfsg-1 [537 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mipsel libnettle8 mipsel 3.6-2 [260 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mipsel libhogweed6 mipsel 3.6-2 [305 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mipsel libunistring2 mipsel 0.9.10-4 [369 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mipsel libidn2-0 mipsel 2.3.0-4 [84.4 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mipsel libffi7 mipsel 3.3-5 [20.2 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mipsel libp11-kit0 mipsel 0.23.22-1 [284 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mipsel libtasn1-6 mipsel 4.16.0-2 [53.4 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mipsel libgnutls30 mipsel 3.7.0-3 [1196 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mipsel libdb5.3 mipsel 5.3.28+dfsg1-0.6 [598 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-modules-db mipsel 2.1.27+dfsg-2 [68.2 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-2 mipsel 2.1.27+dfsg-2 [101 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mipsel libldap-2.4-2 mipsel 2.4.56+dfsg-1 [210 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mipsel libnghttp2-14 mipsel 1.42.0-1 [75.2 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mipsel libpsl5 mipsel 0.21.0-1.1 [55.0 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g mipsel 1:1.2.11.dfsg-2 [88.2 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mipsel librtmp1 mipsel 2.4+20151223.gitfa8646d.1-2+b2 [55.7 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main mipsel libgpg-error0 mipsel 1.38-2 [74.9 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main mipsel libgcrypt20 mipsel 1.8.7-2 [542 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main mipsel libssh2-1 mipsel 1.9.0-1 [150 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl3-gnutls mipsel 7.72.0-1 [315 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl4-gnutls-dev mipsel 7.72.0-1 [438 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main mipsel libdeflate0 mipsel 1.6-1 [49.3 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main mipsel libdeflate-dev mipsel 1.6-1 [44.5 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 10.2.1-1 [92.9 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-9-dev mipsel 9.3.0-19 [222 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main mipsel liblzma5 mipsel 5.2.4-1+b1 [153 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main mipsel libhts3 mipsel 1.11-2 [357 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main mipsel liblzma-dev mipsel 5.2.4-1+b1 [215 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g-dev mipsel 1:1.2.11.dfsg-2 [190 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main mipsel libhts-dev mipsel 1.11-2 [3833 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 10.2.1-1 [436 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-9-dev mipsel 9.3.0-19 [1721 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 143 MB in 1s (108 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10444 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-2_amd64.deb ... Unpacking bsdextrautils (2.36.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.0-6_all.deb ... Unpacking perl-modules-5.32 (5.32.0-6) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.0-6_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.0-6) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.0-6_amd64.deb ... Unpacking perl (5.32.0-6) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-10-base:mipsel. Preparing to unpack .../009-gcc-10-base_10.2.1-1_mipsel.deb ... Unpacking gcc-10-base:mipsel (10.2.1-1) ... Selecting previously unselected package gcc-9-base:mipsel. Preparing to unpack .../010-gcc-9-base_9.3.0-19_mipsel.deb ... Unpacking gcc-9-base:mipsel (9.3.0-19) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.69-12_all.deb ... Unpacking autoconf (2.69-12) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.3-1_all.deb ... Unpacking automake (1:1.16.3-1) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-mipsel-linux-gnu. Preparing to unpack .../023-binutils-mipsel-linux-gnu_2.35.1-4cross3_amd64.deb ... Unpacking binutils-mipsel-linux-gnu (2.35.1-4cross3) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../024-libcrypt-dev_1%3a4.4.17-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.17-1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../025-libkrb5support0_1.18.3-4_amd64.deb ... Unpacking libkrb5support0:amd64 (1.18.3-4) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../026-libk5crypto3_1.18.3-4_amd64.deb ... Unpacking libk5crypto3:amd64 (1.18.3-4) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../027-libkeyutils1_1.6.1-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../028-libssl1.1_1.1.1i-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1i-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../029-libkrb5-3_1.18.3-4_amd64.deb ... Unpacking libkrb5-3:amd64 (1.18.3-4) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../030-libgssapi-krb5-2_1.18.3-4_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.18.3-4) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../031-libtirpc-common_1.2.6-3_all.deb ... Unpacking libtirpc-common (1.2.6-3) ... Selecting previously unselected package libtirpc3:amd64. Preparing to unpack .../032-libtirpc3_1.2.6-3_amd64.deb ... Unpacking libtirpc3:amd64 (1.2.6-3) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../033-libnsl2_1.3.0-2_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-2) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../034-libtirpc-dev_1.2.6-3_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.2.6-3) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../035-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../036-libc6-dev_2.31-5_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-5) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../037-libstdc++-10-dev_10.2.1-1_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.1-1) ... Selecting previously unselected package g++-10. Preparing to unpack .../038-g++-10_10.2.1-1_amd64.deb ... Unpacking g++-10 (10.2.1-1) ... Selecting previously unselected package g++. Preparing to unpack .../039-g++_4%3a10.2.0-1_amd64.deb ... Unpacking g++ (4:10.2.0-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../040-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../041-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../042-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-10-mipsel-linux-gnu-base:amd64. Preparing to unpack .../043-gcc-10-mipsel-linux-gnu-base_10.2.1-1cross1_amd64.deb ... Unpacking gcc-10-mipsel-linux-gnu-base:amd64 (10.2.1-1cross1) ... Selecting previously unselected package cpp-10-mipsel-linux-gnu. Preparing to unpack .../044-cpp-10-mipsel-linux-gnu_10.2.1-1cross1_amd64.deb ... Unpacking cpp-10-mipsel-linux-gnu (10.2.1-1cross1) ... Selecting previously unselected package cpp-mipsel-linux-gnu. Preparing to unpack .../045-cpp-mipsel-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking cpp-mipsel-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../046-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-10-cross-base-mipsen. Preparing to unpack .../047-gcc-10-cross-base-mipsen_10.2.1-1cross1_all.deb ... Unpacking gcc-10-cross-base-mipsen (10.2.1-1cross1) ... Selecting previously unselected package libc6-mipsel-cross. Preparing to unpack .../048-libc6-mipsel-cross_2.31-2cross1_all.deb ... Unpacking libc6-mipsel-cross (2.31-2cross1) ... Selecting previously unselected package libgcc-s1-mipsel-cross. Preparing to unpack .../049-libgcc-s1-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libgcc-s1-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package libgomp1-mipsel-cross. Preparing to unpack .../050-libgomp1-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libgomp1-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package libatomic1-mipsel-cross. Preparing to unpack .../051-libatomic1-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libatomic1-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package libgcc-10-dev-mipsel-cross. Preparing to unpack .../052-libgcc-10-dev-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libgcc-10-dev-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package gcc-10-mipsel-linux-gnu. Preparing to unpack .../053-gcc-10-mipsel-linux-gnu_10.2.1-1cross1_amd64.deb ... Unpacking gcc-10-mipsel-linux-gnu (10.2.1-1cross1) ... Selecting previously unselected package gcc-mipsel-linux-gnu. Preparing to unpack .../054-gcc-mipsel-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking gcc-mipsel-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package libstdc++6-mipsel-cross. Preparing to unpack .../055-libstdc++6-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libstdc++6-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package linux-libc-dev-mipsel-cross. Preparing to unpack .../056-linux-libc-dev-mipsel-cross_5.7.10-1cross1_all.deb ... Unpacking linux-libc-dev-mipsel-cross (5.7.10-1cross1) ... Selecting previously unselected package libc6-dev-mipsel-cross. Preparing to unpack .../057-libc6-dev-mipsel-cross_2.31-2cross1_all.deb ... Unpacking libc6-dev-mipsel-cross (2.31-2cross1) ... Selecting previously unselected package libstdc++-10-dev-mipsel-cross. Preparing to unpack .../058-libstdc++-10-dev-mipsel-cross_10.2.1-1cross1_all.deb ... Unpacking libstdc++-10-dev-mipsel-cross (10.2.1-1cross1) ... Selecting previously unselected package g++-10-mipsel-linux-gnu. Preparing to unpack .../059-g++-10-mipsel-linux-gnu_10.2.1-1cross1_amd64.deb ... Unpacking g++-10-mipsel-linux-gnu (10.2.1-1cross1) ... Selecting previously unselected package g++-mipsel-linux-gnu. Preparing to unpack .../060-g++-mipsel-linux-gnu_4%3a10.2.0-1_amd64.deb ... Unpacking g++-mipsel-linux-gnu (4:10.2.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../061-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../062-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../063-libicu67_67.1-5_amd64.deb ... Unpacking libicu67:amd64 (67.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../064-libxml2_2.9.10+dfsg-6.3+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.3+b1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../065-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../066-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../067-libxml-sax-perl_1.02+dfsg-1_all.deb ... 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Unpacking libstdc++6:mipsel (10.2.1-1) ... Selecting previously unselected package libstdc++-9-dev:mipsel. Preparing to unpack .../144-libstdc++-9-dev_9.3.0-19_mipsel.deb ... Unpacking libstdc++-9-dev:mipsel (9.3.0-19) ... Selecting previously unselected package sbuild-build-depends-main-dummy:mipsel. Preparing to unpack .../145-sbuild-build-depends-main-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up bsdextrautils (2.36.1-2) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-5) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libglib2.0-0:amd64 (2.66.3-2) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1i-1) ... Setting up libtirpc-common (1.2.6-3) ... Setting up perl-modules-5.32 (5.32.0-6) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:mipsel (5.9.11-1) ... Setting up libc6-mipsel-cross (2.31-2cross1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.39-3) ... Setting up libkrb5support0:amd64 (1.18.3-4) ... Setting up gcc-10-mipsel-linux-gnu-base:amd64 (10.2.1-1cross1) ... Setting up gcc-10-base:mipsel (10.2.1-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up gcc-10-cross-base-mipsen (10.2.1-1cross1) ... Setting up binutils-mipsel-linux-gnu (2.35.1-4cross3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libgomp1-mipsel-cross (10.2.1-1cross1) ... Setting up autopoint (0.19.8.1-10) ... Setting up libk5crypto3:amd64 (1.18.3-4) ... Setting up libperl5.32:amd64 (5.32.0-6) ... Setting up linux-libc-dev-mipsel-cross (5.7.10-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libkrb5-3:amd64 (1.18.3-4) ... Setting up libelf1:amd64 (0.182-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.3+b1) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gcc-9-base:mipsel (9.3.0-19) ... Setting up cpp-10-mipsel-linux-gnu (10.2.1-1cross1) ... Setting up libc6-dev-mipsel-cross (2.31-2cross1) ... Setting up libgcc-s1-mipsel-cross (10.2.1-1cross1) ... Setting up m4 (1.4.18-4) ... Setting up libatomic1-mipsel-cross (10.2.1-1cross1) ... Setting up perl (5.32.0-6) ... Setting up libgcc-10-dev-mipsel-cross (10.2.1-1cross1) ... Setting up cpp-mipsel-linux-gnu (4:10.2.0-1) ... Setting up libgssapi-krb5-2:amd64 (1.18.3-4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-12) ... Setting up dwz (0.13+20201015-2) ... Setting up groff-base (1.22.4-5) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.3-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libtirpc3:amd64 (1.2.6-3) ... Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up gcc-10-mipsel-linux-gnu (10.2.1-1cross1) ... Setting up libstdc++6-mipsel-cross (10.2.1-1cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libstdc++-10-dev-mipsel-cross (10.2.1-1cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-mipsel-linux-gnu (4:10.2.0-1) ... Setting up libtirpc-dev:amd64 (1.2.6-3) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up g++-10-mipsel-linux-gnu (10.2.1-1cross1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-mipsel-linux-gnu (4:10.2.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.31-5) ... Setting up libstdc++-10-dev:amd64 (10.2.1-1) ... Setting up g++-10 (10.2.1-1) ... Setting up libtool (2.4.6-14) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up build-essential (12.8) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-mipsel (12.8) ... Setting up libcrypt1:mipsel (1:4.4.17-1) ... Setting up libgcc-s1:mipsel (10.2.1-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:mipsel (2.31-5) ... Setting up libcrypt-dev:mipsel (1:4.4.17-1) ... Setting up libtasn1-6:mipsel (4.16.0-2) ... Setting up libbz2-1.0:mipsel (1.0.8-4) ... Setting up libdb5.3:mipsel (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:mipsel (10.2.1-1) ... Setting up libkeyutils1:mipsel (1.6.1-2) ... Setting up liblzma5:mipsel (5.2.4-1+b1) ... Setting up libgpg-error0:mipsel (1.38-2) ... Setting up libssl1.1:mipsel (1.1.1i-1) ... Setting up libbrotli1:mipsel (1.0.9-2+b2) ... Setting up libffi7:mipsel (3.3-5) ... Setting up libnghttp2-14:mipsel (1.42.0-1) ... Setting up libunistring2:mipsel (0.9.10-4) ... Setting up libdeflate0:mipsel (1.6-1) ... Setting up libgcrypt20:mipsel (1.8.7-2) ... Setting up debhelper (13.3) ... Setting up zlib1g:mipsel (1:1.2.11.dfsg-2) ... Setting up libidn2-0:mipsel (2.3.0-4) ... Setting up libcom-err2:mipsel (1.45.6-1) ... Setting up libgomp1:mipsel (10.2.1-1) ... Setting up libkrb5support0:mipsel (1.18.3-4) ... Setting up libsasl2-modules-db:mipsel (2.1.27+dfsg-2) ... Setting up libnettle8:mipsel (3.6-2) ... Setting up libgmp10:mipsel (2:6.2.1+dfsg-1) ... Setting up libp11-kit0:mipsel (0.23.22-1) ... Setting up libatomic1:mipsel (10.2.1-1) ... Setting up libk5crypto3:mipsel (1.18.3-4) ... Setting up libsasl2-2:mipsel (2.1.27+dfsg-2) ... Setting up liblzma-dev:mipsel (5.2.4-1+b1) ... Setting up libssh2-1:mipsel (1.9.0-1) ... Setting up libkrb5-3:mipsel (1.18.3-4) ... Setting up libdeflate-dev:mipsel (1.6-1) ... Setting up libpsl5:mipsel (0.21.0-1.1) ... Setting up libhogweed6:mipsel (3.6-2) ... Setting up libgcc-9-dev:mipsel (9.3.0-19) ... Setting up libgnutls30:mipsel (3.7.0-3) ... Setting up librtmp1:mipsel (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:mipsel (1.18.3-4) ... Setting up libtirpc3:mipsel (1.2.6-3) ... Setting up libldap-2.4-2:mipsel (2.4.56+dfsg-1) ... Setting up libcurl3-gnutls:mipsel (7.72.0-1) ... Setting up libcurl4-gnutls-dev:mipsel (7.72.0-1) ... Setting up libtirpc-dev:mipsel (1.2.6-3) ... Setting up libnsl2:mipsel (1.3.0-2) ... Setting up libhts3:mipsel (1.11-2) ... Setting up libnsl-dev:mipsel (1.3.0-2) ... Setting up libc6-dev:mipsel (2.31-5) ... Setting up libstdc++-9-dev:mipsel (9.3.0-19) ... Setting up zlib1g-dev:mipsel (1:1.2.11.dfsg-2) ... Setting up libhts-dev:mipsel (1.11-2) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.31-5) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-4 dpkg-dev_1.20.5 g++-10_10.2.1-1 gcc-10_10.2.1-1 libc6-dev_2.31-5 libstdc++-10-dev_10.2.1-1 libstdc++-10-dev-mipsel-cross_10.2.1-1cross1 libstdc++-9-dev_9.3.0-19 libstdc++6_10.2.1-1 libstdc++6-mipsel-cross_10.2.1-1cross1 linux-libc-dev_5.9.11-1 Package versions: adduser_3.118 apt_2.1.14 autoconf_2.69-12 automake_1:1.16.3-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.48 bash_5.1-1 binutils_2.35.1-4 binutils-common_2.35.1-4 binutils-mipsel-linux-gnu_2.35.1-4cross3 binutils-x86-64-linux-gnu_2.35.1-4 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.1-1 cpp-10-mipsel-linux-gnu_10.2.1-1cross1 cpp-8_8.4.0-5 cpp-mipsel-linux-gnu_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-mipsel_12.8 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.74 debhelper_13.3 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1 g++-10_10.2.1-1 g++-10-mipsel-linux-gnu_10.2.1-1cross1 g++-mipsel-linux-gnu_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.1-1 gcc-10-base_10.2.1-1 gcc-10-cross-base-mipsen_10.2.1-1cross1 gcc-10-mipsel-linux-gnu_10.2.1-1cross1 gcc-10-mipsel-linux-gnu-base_10.2.1-1cross1 gcc-8-base_8.4.0-5 gcc-9-base_9.3.0-19 gcc-mipsel-linux-gnu_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.14 libarchive-zip-perl_1.68-1 libasan5_9.3.0-19 libasan6_10.2.1-1 libatomic1_10.2.1-1 libatomic1-mipsel-cross_10.2.1-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-4 libblkid1_2.36.1-2 libbrotli1_1.0.9-2+b2 libbz2-1.0_1.0.8-4 libc-bin_2.31-5 libc-dev-bin_2.31-5 libc6_2.31-5 libc6-dev_2.31-5 libc6-dev-mipsel-cross_2.31-2cross1 libc6-mipsel-cross_2.31-2cross1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-4 libctf0_2.35.1-4 libcurl3-gnutls_7.72.0-1 libcurl4-gnutls-dev_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.3 libdebian-dpkgcross-perl_2.6.15-3.1 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdpkg-perl_1.20.5 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi6_3.2.1-9 libffi7_3.3-5 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-1 libgcc-10-dev-mipsel-cross_10.2.1-1cross1 libgcc-9-dev_9.3.0-19 libgcc-s1_10.2.1-1 libgcc-s1-mipsel-cross_10.2.1-1cross1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.0-3 libgomp1_10.2.1-1 libgomp1-mipsel-cross_10.2.1-1cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libhts-dev_1.11-2 libhts3_1.11-2 libicu67_67.1-5 libidn2-0_2.3.0-4 libio-string-perl_1.08-3 libisl19_0.20-2 libisl23_0.23-1 libitm1_10.2.1-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libldap-2.4-2_2.4.56+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.1-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-5 libncursesw6_6.2+20201114-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.0-6 libpipeline1_1.5.3-1 libpsl5_0.21.0-1.1 libquadmath0_10.2.1-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+b1 libselinux1_3.1-2+b2 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36.1-2 libss2_1.45.6-1 libssh2-1_1.9.0-1 libssl1.1_1.1.1i-1 libstdc++-10-dev_10.2.1-1 libstdc++-10-dev-mipsel-cross_10.2.1-1cross1 libstdc++-9-dev_9.3.0-19 libstdc++6_10.2.1-1 libstdc++6-mipsel-cross_10.2.1-1cross1 libsub-override-perl_0.09-2 libsystemd0_247.1-4 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libtsan0_10.2.1-1 libubsan1_10.2.1-1 libuchardet0_0.0.7-1 libudev1_247.1-4 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.3+b1 libxxhash0_0.8.0-1 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.9.11-1 linux-libc-dev-mipsel-cross_5.7.10-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-6 perl-base_5.32.0-6 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.0-6 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1 tzdata_2020d-1 ucf_3.0043 util-linux_2.36.1-2 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ivar Binary: ivar, ivar-doc Architecture: any all Version: 1.3+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/andersen-lab/ivar Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/ivar Vcs-Git: https://salsa.debian.org/med-team/ivar.git Testsuite: autopkgtest Testsuite-Triggers: samtools Build-Depends: debhelper-compat (= 13), libhts-dev Package-List: ivar deb science optional arch=any ivar-doc deb doc optional arch=all Checksums-Sha1: 743fcaeac5b42311cb0d7d180932c8caeb0fcb6d 630292 ivar_1.3+dfsg.orig.tar.xz 4ed491f61b0494756f4c9494f6e529a3c271449f 42988 ivar_1.3+dfsg-1.debian.tar.xz Checksums-Sha256: 2d206795c0c3b94e41ea3d9b94d8ac1b8f3d2bbc1fd62b2c8c510475bad81ecc 630292 ivar_1.3+dfsg.orig.tar.xz deff74cce3a60d44b99dc7d1e6d784c42b1c9c78a02496562cab29ef093b12f6 42988 ivar_1.3+dfsg-1.debian.tar.xz Files: c54b862be202ef61b52d8dd7a69908ce 630292 ivar_1.3+dfsg.orig.tar.xz 9a75e6c5f1a30d33bea62971f4e3d017 42988 ivar_1.3+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEE5Qr9Va3SequXFjqLIdIFiZdLPpYFAl/WmVUUHHRtYW5jaWxs QGRlYmlhbi5vcmcACgkQIdIFiZdLPpZ93xAApnVT5YH1slrGuJPlLRScIHq05uyb iyU5SExb3ykxPECG0iBoCX3mfG+HF4ZGTOjdYR0ZfTlroXQmxuyB80dZl3Kkmx1F S4mfL9vMa98EK35Uj80k7U3VUXXIxKugUHBGO4vmWLly0q7VIUEUhDOHi4oKPz2B yWBjjU+8jDLVutGmVxbBUBTX/uMf6A9d9+iXOLYL//GYL00PddDyKFeMYil43Zjg 4kpyMa/37+dfUrarrjLYASn+LPU5ZspnFsT+hCmv4CAr8IVOGa1LLaVCm/RpozDb qpEcrp6JqI+CoqjclQdE4xOF+Q1puqz+2hCrAOvcS6V7zof1OCj7a73wSguT45xY MXDqMMUAj7RIVB+ZAHcQ0v7Bpwirba0htz/UIlEyNvZl0PRwoUkS7j7c2UgJD/e9 rDQHsP9El9Odg7hofQpPEZn9ZVIutWQeGTMOGN3aQHc4jf3OsNFA/1Y86XTQQRNb IXp05no/rcqIZyJUcudZkj/N4VkO+KOg5zuoBJmMj+CD3V84Mnm97gM/805Gp04D bqK4kD9WUt6M1s6qQ3VnZteDI9YELinxbkL5foXLU8AdTa9df/lzlmccIfjHqM0t ExpalhaBLCtOBzNaPvHlVn0h+jdBcw/oW7OjT95rI3tYkD80oHPQs5le+J3tIKZk 3mYXIwXfXGeeu84= =7GaV -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.n9jrxoz3/trustedkeys.kbx': General error gpgv: Signature made Sun Dec 13 22:44:37 2020 UTC gpgv: using RSA key E50AFD55ADD27AAB97163A8B21D20589974B3E96 gpgv: issuer "tmancill@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ivar_1.3+dfsg-1.dsc dpkg-source: info: extracting ivar in /<> dpkg-source: info: unpacking ivar_1.3+dfsg.orig.tar.xz dpkg-source: info: unpacking ivar_1.3+dfsg-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-4089c675-0f28-4116-93d1-29ced02d9181 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package ivar dpkg-buildpackage: info: source version 1.3+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f data/db/test_ref.fa.fai data/test.gap.fa data/test.gap.qual.txt data/test.indel.tsv data/test.masked_primer_indices.txt data/test.trimmed.masked.bam data/test.trimmed.masked.bam.bai data/test.trimmed.sorted.bam.bai data/test.unmapped.sorted.bam.bai make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:12: installing './compile' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mipsel-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mipsel-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.mipsel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mipsel-linux-gnu-strip... mipsel-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gawk... (cached) mawk checking for mipsel-linux-gnu-g++... mipsel-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether mipsel-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mipsel-linux-gnu-g++... none checking for mipsel-linux-gnu-gcc... mipsel-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether mipsel-linux-gnu-gcc accepts -g... yes checking for mipsel-linux-gnu-gcc option to accept ISO C89... none needed checking whether mipsel-linux-gnu-gcc understands -c and -o together... yes checking dependency style of mipsel-linux-gnu-gcc... none checking how to run the C preprocessor... mipsel-linux-gnu-gcc -E checking for main in -lhts... no checking for main in -lpthread... no checking for main in -lz... no checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for int16_t... yes checking for int32_t... yes checking for int8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for memmove... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in src make[3]: Entering directory '/<>/src' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o ivar.o ivar.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ivar.cpp -mel -quiet -dumpbase ivar.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip ivar.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccZUTdOF.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o ivar.o /tmp/ccZUTdOF.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o call_consensus_pileup.o call_consensus_pileup.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 call_consensus_pileup.cpp -mel -quiet -dumpbase call_consensus_pileup.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip call_consensus_pileup.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccL6EkvT.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o call_consensus_pileup.o /tmp/ccL6EkvT.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o alignment.o alignment.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 alignment.cpp -mel -quiet -dumpbase alignment.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip alignment.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cclytSS7.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o alignment.o /tmp/cclytSS7.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o suffix_tree.o suffix_tree.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 suffix_tree.cpp -mel -quiet -dumpbase suffix_tree.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip suffix_tree.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cc9KgSfk.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o suffix_tree.o /tmp/cc9KgSfk.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o trim_primer_quality.o trim_primer_quality.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 trim_primer_quality.cpp -mel -quiet -dumpbase trim_primer_quality.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip trim_primer_quality.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cckcL29v.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o trim_primer_quality.o /tmp/cckcL29v.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o remove_reads_from_amplicon.o remove_reads_from_amplicon.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 remove_reads_from_amplicon.cpp -mel -quiet -dumpbase remove_reads_from_amplicon.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip remove_reads_from_amplicon.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccqwjugM.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o remove_reads_from_amplicon.o /tmp/ccqwjugM.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o call_variants.o call_variants.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 call_variants.cpp -mel -quiet -dumpbase call_variants.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip call_variants.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccLm25c0.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o call_variants.o /tmp/ccLm25c0.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o primer_bed.o primer_bed.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 primer_bed.cpp -mel -quiet -dumpbase primer_bed.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip primer_bed.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccu9Kpvf.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o primer_bed.o /tmp/ccu9Kpvf.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o allele_functions.o allele_functions.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 allele_functions.cpp -mel -quiet -dumpbase allele_functions.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip allele_functions.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cctLkdTp.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o allele_functions.o /tmp/cctLkdTp.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o get_masked_amplicons.o get_masked_amplicons.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 get_masked_amplicons.cpp -mel -quiet -dumpbase get_masked_amplicons.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip get_masked_amplicons.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccCfCHgH.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o get_masked_amplicons.o /tmp/ccCfCHgH.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o get_common_variants.o get_common_variants.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 get_common_variants.cpp -mel -quiet -dumpbase get_common_variants.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip get_common_variants.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccfOiP8V.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o get_common_variants.o /tmp/ccfOiP8V.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o parse_gff.o parse_gff.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 parse_gff.cpp -mel -quiet -dumpbase parse_gff.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip parse_gff.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cc713Oh7.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o parse_gff.o /tmp/cc713Oh7.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o ref_seq.o ref_seq.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ref_seq.cpp -mel -quiet -dumpbase ref_seq.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip ref_seq.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/ccOzeBHm.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o ref_seq.o /tmp/ccOzeBHm.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -v -g -std=c++11 -Wall -Wextra -Werror -c -o interval_tree.o interval_tree.cpp Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/cc1plus -quiet -v -I . -I .. -imultiarch mipsel-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 interval_tree.cpp -mel -quiet -dumpbase interval_tree.cpp -march=mips32r2 -mfpxx -mllsc -mno-lxc1-sxc1 -mno-madd4 -mips32r2 -mabi=32 -auxbase-strip interval_tree.o -g -Wdate-time -Wall -Wextra -Werror -std=c++11 -version -o /tmp/cckx4czz.s GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/include/mipsel-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc-cross/mipsel-linux-gnu/10/include-fixed" #include "..." search starts here: #include <...> search starts here: . .. /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10 /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/mipsel-linux-gnu /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include/c++/10/backward /usr/lib/gcc-cross/mipsel-linux-gnu/10/include /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/include /usr/include/mipsel-linux-gnu /usr/include End of search list. GNU C++11 (Debian 10.2.1-1) version 10.2.1 20201207 (mipsel-linux-gnu) compiled by GNU C version 10.2.1 20201207, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.0, isl version isl-0.23-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 0b3ad12158fb783d9e41ed76af3658fb COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/as -v -I . -I .. -EL -mips32r2 -O1 -g -mabi=32 -march=mips32r2 -mfpxx -KPIC -o interval_tree.o /tmp/cckx4czz.s GNU assembler version 2.35.1 (mipsel-linux-gnu) using BFD version (GNU Binutils for Debian) 2.35.1 COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' mipsel-linux-gnu-g++ -v -g -std=c++11 -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread Using built-in specs. COLLECT_GCC=mipsel-linux-gnu-g++ COLLECT_LTO_WRAPPER=/usr/lib/gcc-cross/mipsel-linux-gnu/10/lto-wrapper Target: mipsel-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 10.2.1-1' --with-bugurl=file:///usr/share/doc/gcc-10/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-10 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-libitm --disable-libsanitizer --disable-libquadmath --disable-libquadmath-support --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --without-target-system-zlib --enable-multiarch --disable-werror --enable-multilib --with-arch-32=mips32r2 --with-fp-32=xx --with-madd4=no --with-lxc1-sxc1=no --enable-targets=all --with-arch-64=mips64r2 --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=mipsel-linux-gnu --program-prefix=mipsel-linux-gnu- --includedir=/usr/mipsel-linux-gnu/include --with-build-config=bootstrap-lto-lean --enable-link-mutex Thread model: posix Supported LTO compression algorithms: zlib gcc version 10.2.1 20201207 (Debian 10.2.1-1) COMPILER_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/bin/ LIBRARY_PATH=/usr/lib/gcc-cross/mipsel-linux-gnu/10/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/:/lib/mipsel-linux-gnu/:/lib/../lib/:/usr/lib/mipsel-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' /usr/lib/gcc-cross/mipsel-linux-gnu/10/collect2 -plugin /usr/lib/gcc-cross/mipsel-linux-gnu/10/liblto_plugin.so -plugin-opt=/usr/lib/gcc-cross/mipsel-linux-gnu/10/lto-wrapper -plugin-opt=-fresolution=/tmp/ccqZY3CR.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ --build-id --eh-frame-hdr -EL -mips32r2 -as-needed -dynamic-linker /lib/ld.so.1 -melf32ltsmip -pie -o ivar /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/Scrt1.o /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/crti.o /usr/lib/gcc-cross/mipsel-linux-gnu/10/crtbeginS.o -L/usr/lib/gcc-cross/mipsel-linux-gnu/10 -L/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib -L/lib/mipsel-linux-gnu -L/lib/../lib -L/usr/lib/mipsel-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib -z relro -z now ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc-cross/mipsel-linux-gnu/10/crtendS.o /usr/lib/gcc-cross/mipsel-linux-gnu/10/../../../../mipsel-linux-gnu/lib/../lib/crtn.o COLLECT_GCC_OPTIONS='-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-march=mips32r2' '-mfpxx' '-mllsc' '-mno-lxc1-sxc1' '-mno-madd4' '-mips32r2' '-EL' '-mabi=32' make[3]: Leaving directory '/<>/src' Making all in tests make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "debian/rules override_dh_auto_test" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/ivar-1.3\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in src make[2]: Entering directory '/<>/src' make[3]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c ivar '/<>/debian/tmp/usr/bin' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a -a dh_strip -a -a dh_makeshlibs -a -a dh_shlibdeps -a -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'ivar' in '../ivar_1.3+dfsg-1_mipsel.deb'. dpkg-deb: building package 'ivar-dbgsym' in '../ivar-dbgsym_1.3+dfsg-1_mipsel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../ivar_1.3+dfsg-1_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-12-15T16:36:18Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ ivar_1.3+dfsg-1_mipsel.changes: ------------------------------- Format: 1.8 Date: Sun, 13 Dec 2020 22:18:59 +0100 Source: ivar Binary: ivar ivar-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 1.3+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: ivar - functions broadly useful for viral amplicon-based sequencing Closes: 977312 Changes: ivar (1.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.1 (routine-update) * Run test suite in a single thread. (Closes: #977312) Checksums-Sha1: 8d3dc0f426f29db0b2a3e7fe9899dfd3257cf201 589492 ivar-dbgsym_1.3+dfsg-1_mipsel.deb 50b5c9c958d3a9fc550e20dc65f7e2b0587dae09 5535 ivar_1.3+dfsg-1_mipsel.buildinfo 5cc3535686ad435154623bc691f893538bf94962 254980 ivar_1.3+dfsg-1_mipsel.deb Checksums-Sha256: f089d485bd849fd065cc1f4628680b502a6de9e13a34b153398536a03436bcb0 589492 ivar-dbgsym_1.3+dfsg-1_mipsel.deb 13449083a35b005d334141c0aac0357963061dc03158091fe3a247b406883e3d 5535 ivar_1.3+dfsg-1_mipsel.buildinfo c17ed759184c0c74ca5b53a12f59410a0c63cd470af383cceb62b724b59abe89 254980 ivar_1.3+dfsg-1_mipsel.deb Files: f6c577e7a5ca5014ce3c43527b821c18 589492 debug optional ivar-dbgsym_1.3+dfsg-1_mipsel.deb 9c60df180862bf527841340ea0e0257d 5535 science optional ivar_1.3+dfsg-1_mipsel.buildinfo 86fd0c6aeea4e44bdb25294699d51993 254980 science optional ivar_1.3+dfsg-1_mipsel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: ivar Binary: ivar ivar-dbgsym Architecture: mipsel Version: 1.3+dfsg-1 Checksums-Md5: f6c577e7a5ca5014ce3c43527b821c18 589492 ivar-dbgsym_1.3+dfsg-1_mipsel.deb 86fd0c6aeea4e44bdb25294699d51993 254980 ivar_1.3+dfsg-1_mipsel.deb Checksums-Sha1: 8d3dc0f426f29db0b2a3e7fe9899dfd3257cf201 589492 ivar-dbgsym_1.3+dfsg-1_mipsel.deb 5cc3535686ad435154623bc691f893538bf94962 254980 ivar_1.3+dfsg-1_mipsel.deb Checksums-Sha256: f089d485bd849fd065cc1f4628680b502a6de9e13a34b153398536a03436bcb0 589492 ivar-dbgsym_1.3+dfsg-1_mipsel.deb c17ed759184c0c74ca5b53a12f59410a0c63cd470af383cceb62b724b59abe89 254980 ivar_1.3+dfsg-1_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 15 Dec 2020 16:36:18 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-12), automake (= 1:1.16.3-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.48), bash (= 5.1-1), binutils (= 2.35.1-4), binutils-common (= 2.35.1-4), binutils-x86-64-linux-gnu (= 2.35.1-4), bsdextrautils (= 2.36.1-2), bsdutils (= 1:2.36.1-2), build-essential (= 12.8), bzip2 (= 1.0.8-4), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.1-1), dash (= 0.5.11+git20200708+dd9ef66-5), debconf (= 1.5.74), debhelper (= 13.3), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13+20201015-2), file (= 1:5.39-3), findutils (= 4.7.0+git20201010-2), g++ (= 4:10.2.0-1), g++-10 (= 10.2.1-1), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.1-1), gcc-10-base (= 10.2.1-1), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.6-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.1-1), libatomic1 (= 10.2.1-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3.1), libaudit1 (= 1:2.8.5-3.1+b1), libbinutils (= 2.35.1-4), libblkid1 (= 2.36.1-2), libbrotli1 (= 1.0.9-2+b2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-5), libc-dev-bin (= 2.31-5), libc6 (= 2.31-5), libc6-dev (= 2.31-5), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.1-1), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-4), libctf0 (= 2.35.1-4), libcurl3-gnutls (= 7.72.0-1), libcurl4-gnutls-dev (= 7.72.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.255), libdebhelper-perl (= 13.3), libdeflate-dev (= 1.6-1), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.20.5), libelf1 (= 0.182-1), libffi7 (= 3.3-5), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.1-1), libgcc-s1 (= 10.2.1-1), libgcrypt20 (= 1.8.7-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libglib2.0-0 (= 2.66.3-2), libgmp10 (= 2:6.2.1+dfsg-1), libgnutls30 (= 3.7.0-3), libgomp1 (= 10.2.1-1), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-4), libhogweed6 (= 3.6-2), libhts-dev (= 1.11-2), libhts3 (= 1.11-2), libicu67 (= 67.1-5), libidn2-0 (= 2.3.0-4), libisl23 (= 0.23-1), libitm1 (= 10.2.1-1), libk5crypto3 (= 1.18.3-4), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-4), libkrb5support0 (= 1.18.3-4), libldap-2.4-2 (= 2.4.56+dfsg-1), liblsan0 (= 10.2.1-1), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-2), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.42.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.0-6), libpipeline1 (= 1.5.3-1), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.2.1-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.5.0-3+b1), libselinux1 (= 3.1-2+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36.1-2), libssh2-1 (= 1.9.0-1), libssl1.1 (= 1.1.1i-1), libstdc++-10-dev (= 10.2.1-1), libstdc++6 (= 10.2.1-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.1-4), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20201114-1), libtirpc-common (= 1.2.6-3), libtirpc-dev (= 1.2.6-3), libtirpc3 (= 1.2.6-3), libtool (= 2.4.6-14), libtsan0 (= 10.2.1-1), libubsan1 (= 10.2.1-1), libuchardet0 (= 0.0.7-1), libudev1 (= 247.1-4), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-2), libxml2 (= 2.9.10+dfsg-6.3+b1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.9.11-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-1), ncurses-bin (= 6.2+20201114-1), patch (= 2.7.6-6), perl (= 5.32.0-6), perl-base (= 5.32.0-6), perl-modules-5.32 (= 5.32.0-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.32+dfsg-1), util-linux (= 2.36.1-2), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607894339" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ ivar-dbgsym_1.3+dfsg-1_mipsel.deb --------------------------------- new Debian package, version 2.0. size 589492 bytes: control archive=536 bytes. 366 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: ivar-dbgsym Source: ivar Version: 1.3+dfsg-1 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 1016 Depends: ivar (= 1.3+dfsg-1) Section: debug Priority: optional Description: debug symbols for ivar Build-Ids: 3fd16b6c46ec0ef331174d585cc9965c6daa7f6a drwxr-xr-x root/root 0 2020-12-13 21:18 ./ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/lib/debug/.build-id/3f/ -rw-r--r-- root/root 1030100 2020-12-13 21:18 ./usr/lib/debug/.build-id/3f/d16b6c46ec0ef331174d585cc9965c6daa7f6a.debug drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-12-13 21:18 ./usr/share/doc/ivar-dbgsym -> ivar ivar_1.3+dfsg-1_mipsel.deb -------------------------- new Debian package, version 2.0. size 254980 bytes: control archive=2036 bytes. 1165 bytes, 24 lines control 3397 bytes, 42 lines md5sums Package: ivar Version: 1.3+dfsg-1 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 2366 Depends: libc6 (>= 2.29), libgcc-s1 (>= 4.2), libhts3 (>= 1.10), libstdc++6 (>= 9) Recommends: samtools Section: science Priority: optional Homepage: https://github.com/andersen-lab/ivar Description: functions broadly useful for viral amplicon-based sequencing iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. Additional tools for metagenomic sequencing are actively being incorporated into iVar. While each of these functions can be accomplished using existing tools, iVar contains an intersection of functionality from multiple tools that are required to call iSNVs and consensus sequences from viral sequencing data across multiple replicates. iVar provided the following functions: . 1. trimming of primers and low-quality bases, 2. consensus calling, 3. variant calling - both iSNVs and insertions/deletions, and 4. identifying mismatches to primer sequences and excluding the corresponding reads from alignment files. drwxr-xr-x root/root 0 2020-12-13 21:18 ./ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/bin/ -rwxr-xr-x root/root 1283768 2020-12-13 21:18 ./usr/bin/ivar drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/doc/ivar/ -rw-r--r-- root/root 1592 2020-11-06 22:17 ./usr/share/doc/ivar/COOKBOOK.md -rw-r--r-- root/root 6621 2020-11-06 22:17 ./usr/share/doc/ivar/MANUAL.md.gz -rw-r--r-- root/root 3456 2020-11-06 22:17 ./usr/share/doc/ivar/README -rw-r--r-- root/root 2697 2020-11-06 22:17 ./usr/share/doc/ivar/README.md.gz -rw-r--r-- root/root 278 2020-12-13 21:18 ./usr/share/doc/ivar/README.test -rw-r--r-- root/root 141 2020-12-13 21:18 ./usr/share/doc/ivar/README.test_data -rw-r--r-- root/root 560 2020-12-13 21:18 ./usr/share/doc/ivar/changelog.Debian.gz -rw-r--r-- root/root 1851 2020-12-13 21:18 ./usr/share/doc/ivar/copyright drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ drwxr-xr-x root/root 0 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/ drwxr-xr-x root/root 0 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/db/ -rw-r--r-- root/root 407 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/db/test_ref.fa -rw-r--r-- root/root 4133 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/pair_info_2.tsv -rw-r--r-- root/root 93 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/pair_information.tsv drwxr-xr-x root/root 0 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/primer_only/ -rw-r--r-- root/root 495 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/primer_only/primer_edge_cases.bam -rw-r--r-- root/root 96 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/primer_only/primer_edge_cases.bam.bai -rw-r--r-- root/root 441 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.bed -rw-r--r-- root/root 314 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.filtered.tsv -rw-r--r-- root/root 984 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.gap.sorted.bam -rw-r--r-- root/root 96 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.gap.sorted.bam.bai -rw-r--r-- root/root 6002 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.gap.sorted.mpileup -rw-r--r-- root/root 481 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.gff -rw-r--r-- root/root 27 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.indel.mpileup -rw-r--r-- root/root 822 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.sim.merged.sorted.bam -rw-r--r-- root/root 96 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.sim.merged.sorted.bam.bai -rw-r--r-- root/root 1210 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.sorted.bam -rw-r--r-- root/root 96 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.sorted.bam.bai -rw-r--r-- root/root 15617 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.trimmed.sorted.bam -rw-r--r-- root/root 1500 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test.unmapped.sorted.bam -rw-r--r-- root/root 1000 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test_amplicon.sorted.bam -rw-r--r-- root/root 10275 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test_isize.bed -rw-r--r-- root/root 1316 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test_isize.sorted.bam -rw-r--r-- root/root 447 2020-11-06 22:17 ./usr/share/doc/ivar/examples/data/test_merged.bed drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/ -rw-r--r-- root/root 141 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/README.test_data -rw-r--r-- root/root 405 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-consensus.fa -rw-r--r-- root/root 357 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-consensus.qual.txt -rw-r--r-- root/root 515910 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-filtered.tsv -rw-r--r-- root/root 82 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-getmasked.txt -rw-r--r-- root/root 828 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-removereads.sam -rw-r--r-- root/root 828 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-trim.sam -rw-r--r-- root/root 828 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-trim2.sam -rw-r--r-- root/root 515739 2020-12-13 21:18 ./usr/share/doc/ivar/examples/ref/out-variants.tsv -rw-r--r-- root/root 2040 2020-12-13 21:18 ./usr/share/doc/ivar/run-unit-test drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-13 21:18 ./usr/share/man/man1/ -rw-r--r-- root/root 741 2020-12-13 21:18 ./usr/share/man/man1/ivar.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [537 B] Get:5 copy:/<>/apt_archive ./ Packages [626 B] Fetched 2126 B in 0s (91.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg liblist-moreutils-xs-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:mipsel t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 7529 kB of archives. After this operation, 21.8 MB of additional disk space will be used. 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amd64 0.12-1+b1 [13.0 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012000-1 [348 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.05-1 [90.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7529 kB in 0s (26.1 MB/s) Selecting previously unselected package readline-common. 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Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-5) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 22916 Build-Time: 30 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 26 Job: ivar_1.3+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: ivar Package-Time: 71 Source-Version: 1.3+dfsg-1 Space: 22916 Status: successful Version: 1.3+dfsg-1 -------------------------------------------------------------------------------- Finished at 2020-12-15T16:36:18Z Build needed 00:01:11, 22916k disk space