sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kallisto 0.46.1+dfsg-1 (arm64) Sat, 09 Nov 2019 21:39:40 +0000 | +==============================================================================+ Package: kallisto Version: 0.46.1+dfsg-1 Source Version: 0.46.1+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-e8955dec-632b-4814-8d07-1397c88dda7d' with '<>' I: NOTICE: Log filtering will replace 'build/kallisto-UA2OgM/resolver-EVZvLg' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [139 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-09-0815.55.pdiff [5605 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-09-1417.14.pdiff [18.7 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-09-2015.22.pdiff [14.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-09-0815.55.pdiff [27.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-09-1417.14.pdiff [5956 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-09-2015.22.pdiff [49.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-11-09-2015.22.pdiff [14.1 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-11-09-2015.22.pdiff [49.9 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8007 kB] Fetched 8323 kB in 2s (4133 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: cpp-9 g++-9 gcc-9 gcc-9-base libasan5 libatomic1 libcc1-0 libgcc-9-dev libgcc1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++-9-dev libstdc++6 libtsan0 libubsan1 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 34.1 MB of archives. After this operation, 4096 B disk space will be freed. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libcc1-0 amd64 9.2.1-18 [47.7 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1 amd64 9.2.1-18 [88.1 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1 amd64 9.2.1-18 [27.7 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1 amd64 9.2.1-18 [9020 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5 amd64 9.2.1-18 [390 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0 amd64 9.2.1-18 [137 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0 amd64 9.2.1-18 [295 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1 amd64 9.2.1-18 [128 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0 amd64 9.2.1-18 [145 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-base amd64 9.2.1-18 [194 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6 amd64 9.2.1-18 [502 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.2.1-18 [9787 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.2.1-18 [1697 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev amd64 9.2.1-18 [2346 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9 amd64 9.2.1-18 [9377 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9 amd64 9.2.1-18 [8900 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1 amd64 1:9.2.1-18 [40.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 34.1 MB in 0s (68.5 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kallisto' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kallisto.git Please use: git clone https://salsa.debian.org/med-team/kallisto.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 855 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.1+dfsg-1 (dsc) [2112 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.1+dfsg-1 (tar) [847 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.1+dfsg-1 (diff) [5124 B] Fetched 855 kB in 0s (33.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kallisto-UA2OgM/kallisto-0.46.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kallisto-UA2OgM' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [414 B] Get:5 copy:/<>/apt_archive ./ Packages [504 B] Fetched 1875 B in 0s (96.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1 libbrotli1:arm64 libbsd0 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libelf1 libexpat1 libffi6:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc1:arm64 libgcc1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhdf5-103:arm64 libhdf5-cpp-103:arm64 libhdf5-dev:arm64 libhogweed5:arm64 libhts-dev:arm64 libhts2:arm64 libicu63 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libncurses6 libnettle7:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpipeline1 libprocps7 libpsl5 libpsl5:arm64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libssh2-1 libssh2-1:arm64 libssl1.1 libssl1.1:arm64 libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf procps sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation cmake-doc ninja-build gcc-9-locales cpp-doc dh-make binutils-multiarch gcc-9-doc libstdc++6-9-dbg-arm64-cross libgcc1-dbg-arm64-cross libgomp1-dbg-arm64-cross libitm1-dbg-arm64-cross libatomic1-dbg-arm64-cross libasan5-dbg-arm64-cross liblsan0-dbg-arm64-cross libtsan0-dbg-arm64-cross libubsan1-dbg-arm64-cross libquadmath0-dbg-arm64-cross manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:arm64 libc-l10n:arm64 locales:arm64 manpages-dev:arm64 rng-tools:arm64 gnutls-bin:arm64 krb5-doc krb5-user krb5-doc:arm64 krb5-user:arm64 libhdf5-doc:arm64 liblzma-doc:arm64 libstdc++-9-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:arm64 ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:arm64 krb5-locales krb5-locales:arm64 libgpm2 publicsuffix publicsuffix:arm64 libsasl2-modules libsasl2-modules:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdmainutils cmake cmake-data cpp-9-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-9-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-9-aarch64-linux-gnu gcc-9-aarch64-linux-gnu-base gcc-9-base:arm64 gcc-9-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base hdf5-helpers:arm64 intltool-debian libaec-dev:arm64 libaec0:arm64 libarchive-zip-perl libarchive13 libasan5:arm64 libasan5-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1 libbrotli1:arm64 libbsd0 libbz2-1.0:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcurl3-gnutls:arm64 libcurl4 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:arm64 libelf1 libexpat1 libffi6:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:arm64 libgcc-9-dev-arm64-cross libgcc1:arm64 libgcc1-arm64-cross libgcrypt20:arm64 libgfortran5:arm64 libglib2.0-0 libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgpg-error0:arm64 libgssapi-krb5-2 libgssapi-krb5-2:arm64 libhdf5-103:arm64 libhdf5-cpp-103:arm64 libhdf5-dev:arm64 libhogweed5:arm64 libhts-dev:arm64 libhts2:arm64 libicu63 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libjpeg62-turbo:arm64 libjpeg62-turbo-dev:arm64 libjsoncpp1 libk5crypto3 libk5crypto3:arm64 libkeyutils1 libkeyutils1:arm64 libkrb5-3 libkrb5-3:arm64 libkrb5support0 libkrb5support0:arm64 libldap-2.4-2 libldap-2.4-2:arm64 libldap-common liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libncurses6 libnettle7:arm64 libnghttp2-14 libnghttp2-14:arm64 libp11-kit0:arm64 libpipeline1 libprocps7 libpsl5 libpsl5:arm64 librhash0 librtmp1 librtmp1:arm64 libsasl2-2 libsasl2-2:arm64 libsasl2-modules-db libsasl2-modules-db:arm64 libsigsegv2 libssh2-1 libssh2-1:arm64 libssl1.1 libssl1.1:arm64 libstdc++-9-dev:arm64 libstdc++-9-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libsz2:arm64 libtasn1-6:arm64 libtool libtsan0:arm64 libtsan0-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 162 newly installed, 0 to remove and 0 not upgraded. Need to get 89.7 MB of archives. After this operation, 351 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.0-1 [1307 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-9-base arm64 9.2.1-18 [194 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20191019-1 [102 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2+b1 [62.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2+b1 [259 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.37-6 [253 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.37-6 [119 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.37-6 [67.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.33.1-2 [2775 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.0-1+b1 [335 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.7-5 [267 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-6 [64.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-6 [116 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-2 [1540 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-6 [366 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-6 [156 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [69.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [106 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.48+dfsg-1 [90.8 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.48+dfsg-1+b2 [225 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.39.2-1 [82.4 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.66.0-1+b1 [332 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3+b1 [77.9 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.33.1-2 [125 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu-base amd64 9.2.1-15cross1 [194 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-aarch64-linux-gnu amd64 9.2.1-15cross1 [6539 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-15cross1 [189 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.29-1cross7 [1253 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-arm64-cross all 1:9.2.1-15cross1 [34.1 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 9.2.1-15cross1 [76.6 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 9.2.1-15cross1 [24.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 9.2.1-15cross1 [8640 B] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 9.2.1-15cross1 [347 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 9.2.1-15cross1 [121 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 9.2.1-15cross1 [267 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 9.2.1-15cross1 [415 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 9.2.1-15cross1 [117 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-arm64-cross all 9.2.1-15cross1 [882 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-aarch64-linux-gnu amd64 9.2.1-15cross1 [6903 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1460 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 5.2.9-2cross7 [1310 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.29-1cross7 [2273 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-arm64-cross all 9.2.1-15cross1 [1635 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-aarch64-linux-gnu amd64 9.2.1-15cross1 [7117 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:9.2.1-3.1 [1180 B] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.29-1 [67.4 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.8 [6644 B] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-11 [547 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.7.1 [173 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-1 [104 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.2-1 [23.6 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.2-1 [14.6 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-2 [145 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.2-3 [1318 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.7.1 [997 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main arm64 hdf5-helpers arm64 1.10.4+repack-10 [35.2 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc1 arm64 1:9.2.1-18 [34.1 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.29-3 [2464 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get:108 http://debian.oregonstate.edu/debian unstable/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 9.2.1-18 [354 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 9.2.1-18 [8844 B] Get:111 http://debian.oregonstate.edu/debian unstable/main arm64 libbrotli1 arm64 1.0.7-5 [260 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-2 [46.3 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 5.3.7-1 [975 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.29-3 [2286 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main arm64 libcom-err2 arm64 1.45.4-1 [70.6 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main arm64 libgmp10 arm64 2:6.1.2+dfsg-4 [226 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main arm64 libnettle7 arm64 3.5.1+really3.5.1-2 [233 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main arm64 libhogweed5 arm64 3.5.1+really3.5.1-2 [135 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main arm64 libunistring2 arm64 0.9.10-2 [381 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main arm64 libidn2-0 arm64 2.2.0-2 [81.8 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main arm64 libffi6 arm64 3.2.1-9 [19.3 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main arm64 libp11-kit0 arm64 0.23.18.1-2 [312 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main arm64 libtasn1-6 arm64 4.14-3 [52.7 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main arm64 libgnutls30 arm64 3.6.10-4 [1093 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main arm64 libkeyutils1 arm64 1.6-6 [14.9 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5support0 arm64 1.17-6 [63.8 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main arm64 libk5crypto3 arm64 1.17-6 [117 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main arm64 libssl1.1 arm64 1.1.1d-2 [1377 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main arm64 libkrb5-3 arm64 1.17-6 [350 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.17-6 [148 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.6 [622 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1 [69.2 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1 [105 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main arm64 libldap-2.4-2 arm64 2.4.48+dfsg-1+b2 [217 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main arm64 libnghttp2-14 arm64 1.39.2-1 [79.3 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main arm64 libpsl5 arm64 0.20.2-2 [53.6 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-1+b1 [88.4 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b1 [59.4 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main arm64 libgpg-error0 arm64 1.36-7 [68.8 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main arm64 libgcrypt20 arm64 1.8.5-3 [488 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main arm64 libssh2-1 arm64 1.8.0-2.1 [135 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main arm64 libcurl3-gnutls arm64 7.66.0-1+b1 [311 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main arm64 libdeflate0 arm64 1.3-3 [80.4 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 9.2.1-18 [78.5 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 9.2.1-18 [24.7 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 9.2.1-18 [122 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 9.2.1-18 [274 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 9.2.1-18 [454 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 9.2.1-18 [117 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-9-dev arm64 9.2.1-18 [885 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main arm64 libgfortran5 arm64 9.2.1-18 [322 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-103 arm64 1.10.4+repack-10 [1168 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [132 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1+b1 [208 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo arm64 1:1.5.2-2+b1 [115 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:1.5.2-2+b1 [186 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main arm64 libhdf5-dev arm64 1.10.4+repack-10 [2683 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma5 arm64 5.2.4-1+b1 [149 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main arm64 libhts2 arm64 1.9-11 [277 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main arm64 liblzma-dev arm64 5.2.4-1+b1 [209 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main arm64 libhts-dev arm64 1.9-11 [4338 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-9-dev arm64 9.2.1-18 [1655 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 89.7 MB in 1s (64.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14997 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.0-1_amd64.deb ... Unpacking man-db (2.9.0-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../006-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-9-base:arm64. Preparing to unpack .../007-gcc-9-base_9.2.1-18_arm64.deb ... Unpacking gcc-9-base:arm64 (9.2.1-18) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../008-libncurses6_6.1+20191019-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20191019-1) ... Selecting previously unselected package libprocps7:amd64. Preparing to unpack .../009-libprocps7_2%3a3.3.15-2+b1_amd64.deb ... Unpacking libprocps7:amd64 (2:3.3.15-2+b1) ... Selecting previously unselected package procps. Preparing to unpack .../010-procps_2%3a3.3.15-2+b1_amd64.deb ... Unpacking procps (2:3.3.15-2+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.37-6_amd64.deb ... Unpacking libmagic-mgc (1:5.37-6) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.37-6_amd64.deb ... Unpacking libmagic1:amd64 (1:5.37-6) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.37-6_amd64.deb ... Unpacking file (1:5.37-6) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... 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Preparing to unpack .../160-libstdc++-9-dev_9.2.1-18_arm64.deb ... Unpacking libstdc++-9-dev:arm64 (9.2.1-18) ... Selecting previously unselected package sbuild-build-depends-main-dummy:arm64. Preparing to unpack .../161-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libexpat1:amd64 (2.2.9-1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libkeyutils1:amd64 (1.6-6) ... Setting up libpsl5:amd64 (0.20.2-2) ... Setting up hdf5-helpers:arm64 (1.10.4+repack-10) ... Setting up libmagic-mgc (1:5.37-6) ... Setting up libarchive-zip-perl (1.67-1) ... Setting up libglib2.0-0:amd64 (2.62.2-3) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libprocps7:amd64 (2:3.3.15-2+b1) ... Setting up gcc-9-aarch64-linux-gnu-base:amd64 (9.2.1-15cross1) ... Setting up libdebhelper-perl (12.7.1) ... Setting up libbrotli1:amd64 (1.0.7-5) ... Setting up libnghttp2-14:amd64 (1.39.2-1) ... Setting up libmagic1:amd64 (1:5.37-6) ... Setting up linux-libc-dev:arm64 (5.3.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up binutils-aarch64-linux-gnu (2.33.1-2) ... Setting up cpp-9-aarch64-linux-gnu (9.2.1-15cross1) ... Setting up file (1:5.37-6) ... Setting up libldap-common (2.4.48+dfsg-1) ... Setting up libyaml-perl (1.29-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libkrb5support0:amd64 (1.17-6) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libuv1:amd64 (1.33.1-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libncurses6:amd64 (6.1+20191019-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libc6-arm64-cross (2.29-1cross7) ... Setting up autopoint (0.19.8.1-9) ... Setting up gcc-9-cross-base (9.2.1-15cross1) ... Setting up libk5crypto3:amd64 (1.17-6) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1) ... Setting up linux-libc-dev-arm64-cross (5.2.9-2cross7) ... Setting up sensible-utils (0.0.12) ... Setting up librhash0:amd64 (1.3.8-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up procps (2:3.3.15-2+b1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:amd64 (1.17-6) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libjsoncpp1:amd64 (1.7.4-3+b1) ... Setting up gcc-9-base:arm64 (9.2.1-18) ... Setting up libatomic1-arm64-cross (9.2.1-15cross1) ... Setting up libgcc1-arm64-cross (1:9.2.1-15cross1) ... Setting up libfile-stripnondeterminism-perl (1.6.2-1) ... Setting up liblsan0-arm64-cross (9.2.1-15cross1) ... Setting up libgomp1-arm64-cross (9.2.1-15cross1) ... Setting up libtool (2.4.6-11) ... Setting up libarchive13:amd64 (3.4.0-1+b1) ... Setting up libtsan0-arm64-cross (9.2.1-15cross1) ... Setting up libldap-2.4-2:amd64 (2.4.48+dfsg-1+b2) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-arm64-cross (2.29-1cross7) ... Setting up libasan5-arm64-cross (9.2.1-15cross1) ... Setting up libstdc++6-arm64-cross (9.2.1-15cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libitm1-arm64-cross (9.2.1-15cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dh-strip-nondeterminism (1.6.2-1) ... Setting up dwz (0.13-2) ... Setting up groff-base (1.22.4-3) ... Setting up libcurl4:amd64 (7.66.0-1+b1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up libubsan1-arm64-cross (9.2.1-15cross1) ... Setting up libgcc-9-dev-arm64-cross (9.2.1-15cross1) ... Setting up man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-9-aarch64-linux-gnu (9.2.1-15cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up cmake (3.13.4-1) ... Setting up libstdc++-9-dev-arm64-cross (9.2.1-15cross1) ... Setting up gcc-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up po-debconf (1.0.21) ... Setting up g++-9-aarch64-linux-gnu (9.2.1-15cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-aarch64-linux-gnu (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-arm64 (12.8) ... Setting up libc6:arm64 (2.29-3) ... Setting up libnettle7:arm64 (3.5.1+really3.5.1-2) ... Setting up libtasn1-6:arm64 (4.14-3) ... Setting up libc6-dev:arm64 (2.29-3) ... Setting up libbz2-1.0:arm64 (1.0.8-2) ... Setting up libdb5.3:arm64 (5.3.28+dfsg1-0.6) ... Setting up libitm1:arm64 (9.2.1-18) ... Setting up libkeyutils1:arm64 (1.6-6) ... Setting up liblzma5:arm64 (5.2.4-1+b1) ... Setting up libgpg-error0:arm64 (1.36-7) ... Setting up libgcc1:arm64 (1:9.2.1-18) ... Setting up libssl1.1:arm64 (1.1.1d-2) ... Setting up libbrotli1:arm64 (1.0.7-5) ... Setting up libnghttp2-14:arm64 (1.39.2-1) ... Setting up libunistring2:arm64 (0.9.10-2) ... Setting up libdeflate0:arm64 (1.3-3) ... Setting up libgcrypt20:arm64 (1.8.5-3) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-1+b1) ... Setting up libffi6:arm64 (3.2.1-9) ... Setting up libidn2-0:arm64 (2.2.0-2) ... Setting up libcom-err2:arm64 (1.45.4-1) ... Setting up libgomp1:arm64 (9.2.1-18) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libkrb5support0:arm64 (1.17-6) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1) ... Setting up dh-autoreconf (19) ... Setting up libasan5:arm64 (9.2.1-18) ... Setting up libjpeg62-turbo:arm64 (1:1.5.2-2+b1) ... Setting up libjpeg62-turbo-dev:arm64 (1:1.5.2-2+b1) ... Setting up libgmp10:arm64 (2:6.1.2+dfsg-4) ... Setting up libp11-kit0:arm64 (0.23.18.1-2) ... Setting up libatomic1:arm64 (9.2.1-18) ... Setting up libk5crypto3:arm64 (1.17-6) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1) ... Setting up libgfortran5:arm64 (9.2.1-18) ... Setting up liblzma-dev:arm64 (5.2.4-1+b1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1+b1) ... Setting up libssh2-1:arm64 (1.8.0-2.1) ... Setting up libkrb5-3:arm64 (1.17-6) ... Setting up libstdc++6:arm64 (9.2.1-18) ... Setting up liblsan0:arm64 (9.2.1-18) ... Setting up libsz2:arm64 (1.0.4-1) ... Setting up libtsan0:arm64 (9.2.1-18) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up libhogweed5:arm64 (3.5.1+really3.5.1-2) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up debhelper (12.7.1) ... Setting up libgnutls30:arm64 (3.6.10-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up libgssapi-krb5-2:arm64 (1.17-6) ... Setting up libubsan1:arm64 (9.2.1-18) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up libldap-2.4-2:arm64 (2.4.48+dfsg-1+b2) ... Setting up libcurl3-gnutls:arm64 (7.66.0-1+b1) ... Setting up libgcc-9-dev:arm64 (9.2.1-18) ... Setting up libhdf5-dev:arm64 (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libstdc++-9-dev:arm64 (9.2.1-18) ... Setting up libhts2:arm64 (1.9-11) ... Setting up libhts-dev:arm64 (1.9-11) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.29-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) amd64 (x86_64) Toolchain package versions: binutils_2.33.1-2 dpkg-dev_1.19.7 g++-8_8.3.0-24 g++-9_9.2.1-18 gcc-8_8.3.0-24 gcc-9_9.2.1-18 libc6-dev_2.29-3 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-18 libstdc++-9-dev-arm64-cross_9.2.1-15cross1 libstdc++6_9.2.1-18 libstdc++6-arm64-cross_9.2.1-15cross1 linux-libc-dev_5.3.7-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.46 bash_5.0-4 binutils_2.33.1-2 binutils-aarch64-linux-gnu_2.33.1-2 binutils-common_2.33.1-2 binutils-x86-64-linux-gnu_2.33.1-2 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-24 cpp-9_9.2.1-18 cpp-9-aarch64-linux-gnu_9.2.1-15cross1 cpp-aarch64-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-arm64_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.7.1 debian-archive-keyring_2019.1 debianutils_4.9 dh-autoreconf_19 dh-strip-nondeterminism_1.6.2-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-2 e2fsprogs_1.45.4-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.37-6 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-8_8.3.0-24 g++-9_9.2.1-18 g++-9-aarch64-linux-gnu_9.2.1-15cross1 g++-aarch64-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-8_8.3.0-24 gcc-8-base_8.3.0-24 gcc-9_9.2.1-18 gcc-9-aarch64-linux-gnu_9.2.1-15cross1 gcc-9-aarch64-linux-gnu-base_9.2.1-15cross1 gcc-9-base_9.2.1-18 gcc-9-cross-base_9.2.1-15cross1 gcc-aarch64-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.17-3 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3+b1 hdf5-helpers_1.10.4+repack-10 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libarchive13_3.4.0-1+b1 libasan5_9.2.1-18 libasan5-arm64-cross_9.2.1-15cross1 libatomic1_9.2.1-18 libatomic1-arm64-cross_9.2.1-15cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2 libbinutils_2.33.1-2 libblkid1_2.34-0.1 libbrotli1_1.0.7-5 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-3 libc-dev-bin_2.29-3 libc6_2.29-3 libc6-arm64-cross_2.29-1cross7 libc6-dev_2.29-3 libc6-dev-arm64-cross_2.29-1cross7 libcap-ng0_0.7.9-2.1 libcc1-0_9.2.1-18 libcom-err2_1.45.4-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.13-1 libcurl3-gnutls_7.66.0-1+b1 libcurl4_7.66.0-1+b1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.7.1 libdebian-dpkgcross-perl_2.6.15-3 libdeflate0_1.3-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.4-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-24 libgcc-9-dev_9.2.1-18 libgcc-9-dev-arm64-cross_9.2.1-15cross1 libgcc1_1:9.2.1-18 libgcc1-arm64-cross_1:9.2.1-15cross1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_9.2.1-18 libglib2.0-0_2.62.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.10-4 libgomp1_9.2.1-18 libgomp1-arm64-cross_9.2.1-15cross1 libgpg-error0_1.36-7 libgssapi-krb5-2_1.17-6 libhdf5-103_1.10.4+repack-10 libhdf5-cpp-103_1.10.4+repack-10 libhdf5-dev_1.10.4+repack-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.9-11 libhts2_1.9-11 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl21_0.21-2 libitm1_9.2.1-18 libitm1-arm64-cross_9.2.1-15cross1 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjsoncpp1_1.7.4-3+b1 libk5crypto3_1.17-6 libkeyutils1_1.6-6 libkrb5-3_1.17-6 libkrb5support0_1.17-6 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_9.2.1-18 liblsan0-arm64-cross_9.2.1-15cross1 liblz4-1_1.9.2-1 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.37-6 libmagic1_1:5.37-6 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-24 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.39.2-1 libp11-kit0_0.23.18.1-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.32-5+b1 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.1-2 libprocps7_2:3.3.15-2+b1 libpsl5_0.20.2-2 libquadmath0_9.2.1-18 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.4.1-2 libselinux1_2.9-2+b2 libsemanage-common_2.9-3 libsemanage1_2.9-3 libsepol1_2.9-2+b2 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.4-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-8-dev_8.3.0-24 libstdc++-9-dev_9.2.1-18 libstdc++-9-dev-arm64-cross_9.2.1-15cross1 libstdc++6_9.2.1-18 libstdc++6-arm64-cross_9.2.1-15cross1 libsub-override-perl_0.09-2 libsystemd0_242-8 libsz2_1.0.4-1 libtasn1-6_4.14-3 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libtsan0_9.2.1-18 libtsan0-arm64-cross_9.2.1-15cross1 libubsan1_9.2.1-18 libubsan1-arm64-cross_9.2.1-15cross1 libuchardet0_0.0.6-3 libudev1_242-8 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libuv1_1.33.1-2 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 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Source: kallisto Binary: kallisto, kallisto-examples Architecture: any all Version: 0.46.1+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://pachterlab.github.io/kallisto Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/kallisto Vcs-Git: https://salsa.debian.org/med-team/kallisto.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev Package-List: kallisto deb science optional arch=any kallisto-examples deb science optional arch=all Checksums-Sha1: 585c325fc92d9a83fc86c928c3c41e8ce369b85f 847436 kallisto_0.46.1+dfsg.orig.tar.xz 67f67d58cdc3a15dd70986e4dc47a75ab2ebaec0 5124 kallisto_0.46.1+dfsg-1.debian.tar.xz Checksums-Sha256: 4d8b0bd6bac52eb714df53e81f4a5248c65ba46b70f0edf61a1dfe3dfde62f52 847436 kallisto_0.46.1+dfsg.orig.tar.xz 4bd3dd23fc930a00dc74897e5d963210754ebf5cf008db2614b3c7c3ce647045 5124 kallisto_0.46.1+dfsg-1.debian.tar.xz Files: 55f7580183f5bc63f4efcef116b6d91d 847436 kallisto_0.46.1+dfsg.orig.tar.xz b6a40219e1b794e92aad0ab0303ae159 5124 kallisto_0.46.1+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEhMGXeonn7+0+XKYuL9i+2sAg7tEFAl3F6lUTHG1vZWxsZXJA ZGViaWFuLm9yZwAKCRAv2L7awCDu0YnYD/4j/zo8I4eg4GaI5hKvLNY2z+sW9Xy8 zAfKXPDld8vZ1fiNAFX0+VB3lNAt6Xrav/IVGmXmsQ1GHByc03HQ3vtFiHFLvbJG 39iiNMjRSdj4NcOZfQZS5OAb8t6Z8brnaoE+hUcDm96u2JOCH4IiYYga1z8X4bnh qwYQ9eW1YHDTeDCozXTBo1ezrewd/Z5PHAvkWy+c9Dv0GFEDQ62V4B2w6EaN+pKQ Jb7JyPwMJCGkHZ2aAkR6C51fQrw5EBy+i/Lz8CEhAnAPcFy8vbfHDUT/a/QGfOMp tdbHOw1NwM+XZI9mJ6bVjDrVg2YAwH2T+1xGgtPTqSA6CqxDopp0VprSUyuqr/QD v10V6lLzdqfiNlyyso2fYyRh/BzX53cuEvQZ7P3y1Gm0dn7Jl/rFiVRSbi4rV+6k Gq4VydUuyfUB119pi+nFq5Nrsuo22FKrgWwYvQDcear7l4vsLcs3zOo0/+6wYq6r BB0fqhMcRNlPMiFHjd0VH16sXm7QW4fqRrDtFhXkyR4R2VTzwbbjjF0jcR41xocG JOYTEUGLI/Ylz2AtgaC0gV0mN7u5aOfREr9KDCR2psEoUmRmyI2+zFcUDUiBMdaD oK/Gn8e4yj+Ml75hWcvCk/5ZT6DIRUSxqKc1hnPTPjZCXbc84x2W7eIYIMamoD0a zNYZe8jx0f3xbg== =xb+H -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Nov 8 22:21:09 2019 UTC gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: issuer "moeller@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kallisto_0.46.1+dfsg-1.dsc dpkg-source: info: extracting kallisto in /<> dpkg-source: info: unpacking kallisto_0.46.1+dfsg.orig.tar.xz dpkg-source: info: unpacking kallisto_0.46.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_htslib.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-e8955dec-632b-4814-8d07-1397c88dda7d SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kallisto dpkg-buildpackage: info: source version 0.46.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DDEBIAN_BUILD=1 -DLINK=shared cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DDEBIAN_BUILD=1 -DLINK=shared .. -- The C compiler identification is GNU 9.2.1 -- The CXX compiler identification is GNU 9.2.1 -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- Check for working C compiler: /usr/bin/aarch64-linux-gnu-gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done shared build -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/aarch64-linux-gnu/libpthread.so;/usr/lib/aarch64-linux-gnu/libsz.so;/usr/lib/aarch64-linux-gnu/libz.so;/usr/lib/aarch64-linux-gnu/libdl.so;/usr/lib/aarch64-linux-gnu/libm.so (found version "1.10.4") -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.2.11") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-aarch64-linux-gnu make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-aarch64-linux-gnu && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles /<>/obj-aarch64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/kallisto_core.dir/DependInfo.cmake --color= Scanning dependencies of target kallisto_core make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 4%] Building CXX object src/CMakeFiles/kallisto_core.dir/BUSData.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/BUSData.cpp.o -c /<>/src/BUSData.cpp [ 9%] Building CXX object src/CMakeFiles/kallisto_core.dir/BUSTools.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/BUSTools.cpp.o -c /<>/src/BUSTools.cpp [ 14%] Building CXX object src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o -c /<>/src/Bootstrap.cpp [ 19%] Building CXX object src/CMakeFiles/kallisto_core.dir/GeneModel.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/GeneModel.cpp.o -c /<>/src/GeneModel.cpp [ 23%] Building CXX object src/CMakeFiles/kallisto_core.dir/H5Writer.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/H5Writer.cpp.o -c /<>/src/H5Writer.cpp [ 28%] Building CXX object src/CMakeFiles/kallisto_core.dir/Kmer.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Kmer.cpp.o -c /<>/src/Kmer.cpp [ 33%] Building CXX object src/CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o -c /<>/src/KmerIndex.cpp [ 38%] Building CXX object src/CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o -c /<>/src/KmerIterator.cpp [ 42%] Building CXX object src/CMakeFiles/kallisto_core.dir/Merge.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Merge.cpp.o -c /<>/src/Merge.cpp [ 47%] Building CXX object src/CMakeFiles/kallisto_core.dir/MinCollector.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/MinCollector.cpp.o -c /<>/src/MinCollector.cpp [ 52%] Building CXX object src/CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o -c /<>/src/PlaintextWriter.cpp [ 57%] Building CXX object src/CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o -c /<>/src/ProcessReads.cpp [ 61%] Building CXX object src/CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o -c /<>/src/PseudoBam.cpp [ 66%] Building CXX object src/CMakeFiles/kallisto_core.dir/common.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/common.cpp.o -c /<>/src/common.cpp [ 71%] Building CXX object src/CMakeFiles/kallisto_core.dir/h5utils.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/h5utils.cpp.o -c /<>/src/h5utils.cpp [ 76%] Building CXX object src/CMakeFiles/kallisto_core.dir/hash.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/hash.cpp.o -c /<>/src/hash.cpp [ 80%] Building CXX object src/CMakeFiles/kallisto_core.dir/main.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/main.cpp.o -c /<>/src/main.cpp [ 85%] Building CXX object src/CMakeFiles/kallisto_core.dir/weights.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/<>/src -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/weights.cpp.o -c /<>/src/weights.cpp [ 90%] Linking CXX static library libkallisto_core.a cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/kallisto_core.dir/cmake_clean_target.cmake cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/kallisto_core.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-ar qc libkallisto_core.a CMakeFiles/kallisto_core.dir/BUSData.cpp.o CMakeFiles/kallisto_core.dir/BUSTools.cpp.o CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o CMakeFiles/kallisto_core.dir/GeneModel.cpp.o CMakeFiles/kallisto_core.dir/H5Writer.cpp.o CMakeFiles/kallisto_core.dir/Kmer.cpp.o CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o CMakeFiles/kallisto_core.dir/Merge.cpp.o CMakeFiles/kallisto_core.dir/MinCollector.cpp.o CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o CMakeFiles/kallisto_core.dir/common.cpp.o CMakeFiles/kallisto_core.dir/h5utils.cpp.o CMakeFiles/kallisto_core.dir/hash.cpp.o CMakeFiles/kallisto_core.dir/main.cpp.o CMakeFiles/kallisto_core.dir/weights.cpp.o /usr/bin/aarch64-linux-gnu-ranlib libkallisto_core.a make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' [ 90%] Built target kallisto_core make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/kallisto.dir/DependInfo.cmake --color= Scanning dependencies of target kallisto make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' [ 95%] Building CXX object src/CMakeFiles/kallisto.dir/main.cpp.o cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/aarch64-linux-gnu-g++ -I/usr/include/hdf5/serial -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto.dir/main.cpp.o -c /<>/src/main.cpp [100%] Linking CXX executable kallisto cd /<>/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/kallisto.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/kallisto.dir/main.cpp.o -o kallisto -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial: libkallisto_core.a -lpthread -lhts /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lrt make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' [100%] Built target kallisto make[2]: Leaving directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-aarch64-linux-gnu' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_auto_install -a cd obj-aarch64-linux-gnu && make -j1 install DESTDIR=/<>/kallisto-0.46.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles /<>/obj-aarch64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/kallisto_core.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'src/CMakeFiles/kallisto_core.dir/build'. make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' [ 90%] Built target kallisto_core make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/depend make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' cd /<>/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-aarch64-linux-gnu /<>/obj-aarch64-linux-gnu/src /<>/obj-aarch64-linux-gnu/src/CMakeFiles/kallisto.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/build make[3]: Entering directory '/<>/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'src/CMakeFiles/kallisto.dir/build'. make[3]: Leaving directory '/<>/obj-aarch64-linux-gnu' [100%] Built target kallisto make[2]: Leaving directory '/<>/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-aarch64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/bin/kallisto -- Set runtime path of "/<>/debian/tmp/usr/bin/kallisto" to "" make[1]: Leaving directory '/<>/obj-aarch64-linux-gnu' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_perl: /usr/lib/aarch64-linux-gnu/perl/cross-config-5.30.0/Config.pm does not exist (missing build dependency on perl-xs-dev?) dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'kallisto' in '../kallisto_0.46.1+dfsg-1_arm64.deb'. dpkg-deb: building package 'kallisto-dbgsym' in '../kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kallisto_0.46.1+dfsg-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-11-09T21:41:57Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kallisto_0.46.1+dfsg-1_arm64.changes: ------------------------------------- Format: 1.8 Date: Fri, 08 Nov 2019 23:14:36 +0100 Source: kallisto Binary: kallisto kallisto-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 0.46.1+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steffen Moeller Description: kallisto - near-optimal RNA-Seq quantification Changes: kallisto (0.46.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version Checksums-Sha1: 37441a3e19fd93d9db701dc4bf348beb540125c6 3842588 kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb cc8663f0b2cd2077b557bb5d656d1aaaabb609c5 6135 kallisto_0.46.1+dfsg-1_arm64.buildinfo e87075d3bfd908e37c38708d0747e6997174b127 220256 kallisto_0.46.1+dfsg-1_arm64.deb Checksums-Sha256: aec114969d149e125ea3df5b7ad445699abf8dd124f047dfe83618b15b935a06 3842588 kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb 0dff6eb3794e1aebb23c46f8d620bbb29802b1f11fc84d8e88b85c76b79a3f8a 6135 kallisto_0.46.1+dfsg-1_arm64.buildinfo 4116556398e0ff9d1721a6a264ac818a43593b0e1df129ef622a17ccdabd2d76 220256 kallisto_0.46.1+dfsg-1_arm64.deb Files: 386c163ab655e893a57d56eb41f85e18 3842588 debug optional kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb 2b594ad37fd6a3753a939a79e16a7b79 6135 science optional kallisto_0.46.1+dfsg-1_arm64.buildinfo b9cf20e936326e35ee94ffe79c4a56c0 220256 science optional kallisto_0.46.1+dfsg-1_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kallisto Binary: kallisto kallisto-examples Architecture: arm64 Version: 0.46.1+dfsg-1 Checksums-Md5: 386c163ab655e893a57d56eb41f85e18 3842588 kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb b9cf20e936326e35ee94ffe79c4a56c0 220256 kallisto_0.46.1+dfsg-1_arm64.deb Checksums-Sha1: 37441a3e19fd93d9db701dc4bf348beb540125c6 3842588 kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb e87075d3bfd908e37c38708d0747e6997174b127 220256 kallisto_0.46.1+dfsg-1_arm64.deb Checksums-Sha256: aec114969d149e125ea3df5b7ad445699abf8dd124f047dfe83618b15b935a06 3842588 kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb 4116556398e0ff9d1721a6a264ac818a43593b0e1df129ef622a17ccdabd2d76 220256 kallisto_0.46.1+dfsg-1_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 09 Nov 2019 21:41:56 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.33.1-2), binutils-common (= 2.33.1-2), binutils-x86-64-linux-gnu (= 2.33.1-2), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), cmake (= 3.13.4-1), cmake-data (= 3.13.4-1), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-24), cpp-9 (= 9.2.1-18), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.7.1), debianutils (= 4.9), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-2), fdisk (= 2.34-0.1), file (= 1:5.37-6), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-18), gcc (= 4:9.2.1-3.1), gcc-8 (= 8.3.0-24), gcc-8-base (= 8.3.0-24), gcc-9 (= 9.2.1-18), gcc-9-base (= 9.2.1-18), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3+b1), hdf5-helpers (= 1.10.4+repack-10), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.67-1), libarchive13 (= 3.4.0-1+b1), libasan5 (= 9.2.1-18), libatomic1 (= 9.2.1-18), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2), libbinutils (= 2.33.1-2), libblkid1 (= 2.34-0.1), libbrotli1 (= 1.0.7-5), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-3), libc-dev-bin (= 2.29-3), libc6 (= 2.29-3), libc6-dev (= 2.29-3), libcap-ng0 (= 0.7.9-2.1), libcc1-0 (= 9.2.1-18), libcom-err2 (= 1.45.4-1), libcroco3 (= 0.6.13-1), libcurl3-gnutls (= 7.66.0-1+b1), libcurl4 (= 7.66.0-1+b1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.250), libdebhelper-perl (= 12.7.1), libdeflate0 (= 1.3-3), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libexpat1 (= 2.2.9-1), libfdisk1 (= 2.34-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.6.2-1), libgcc-8-dev (= 8.3.0-24), libgcc-9-dev (= 9.2.1-18), libgcc1 (= 1:9.2.1-18), libgcrypt20 (= 1.8.5-3), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libgfortran5 (= 9.2.1-18), libglib2.0-0 (= 2.62.2-3), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.10-4), libgomp1 (= 9.2.1-18), libgpg-error0 (= 1.36-7), libgssapi-krb5-2 (= 1.17-6), libhdf5-103 (= 1.10.4+repack-10), libhdf5-cpp-103 (= 1.10.4+repack-10), libhdf5-dev (= 1.10.4+repack-10), libhogweed5 (= 3.5.1+really3.5.1-2), libhts-dev (= 1.9-11), libhts2 (= 1.9-11), libicu63 (= 63.2-2), libidn2-0 (= 2.2.0-2), libisl21 (= 0.21-2), libitm1 (= 9.2.1-18), libjpeg62-turbo (= 1:1.5.2-2+b1), libjpeg62-turbo-dev (= 1:1.5.2-2+b1), libjsoncpp1 (= 1.7.4-3+b1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), libldap-2.4-2 (= 2.4.48+dfsg-1+b2), libldap-common (= 2.4.48+dfsg-1), liblsan0 (= 9.2.1-18), liblz4-1 (= 1.9.2-1), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.37-6), libmagic1 (= 1:5.37-6), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-24), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.39.2-1), libp11-kit0 (= 0.23.18.1-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.32-5+b1), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.1-2), libprocps7 (= 2:3.3.15-2+b1), libpsl5 (= 0.20.2-2), libquadmath0 (= 9.2.1-18), librhash0 (= 1.3.8-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-1), libsasl2-modules-db (= 2.1.27+dfsg-1), libseccomp2 (= 2.4.1-2), libselinux1 (= 2.9-2+b2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1d-2), libstdc++-9-dev (= 9.2.1-18), libstdc++6 (= 9.2.1-18), libsub-override-perl (= 0.09-2), libsystemd0 (= 242-8), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.14-3), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-11), libtsan0 (= 9.2.1-18), libubsan1 (= 9.2.1-18), libuchardet0 (= 0.0.6-3), libudev1 (= 242-8), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libuv1 (= 1.33.1-2), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.4.3+dfsg-1), linux-libc-dev (= 5.3.7-1), login (= 1:4.7-2), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.0-1), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), procps (= 2:3.3.15-2+b1), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.96-1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-1+b1), zlib1g-dev (= 1:1.2.11.dfsg-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1573251276" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kallisto-dbgsym_0.46.1+dfsg-1_arm64.deb --------------------------------------- new Debian package, version 2.0. size 3842588 bytes: control archive=544 bytes. 387 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: kallisto-dbgsym Source: kallisto Version: 0.46.1+dfsg-1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3885 Depends: kallisto (= 0.46.1+dfsg-1) Section: debug Priority: optional Description: debug symbols for kallisto Build-Ids: 80e5dc1922d3eea9337df00dc8e7ebe8c4679563 drwxr-xr-x root/root 0 2019-11-08 22:14 ./ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/lib/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/lib/debug/.build-id/80/ -rw-r--r-- root/root 3967600 2019-11-08 22:14 ./usr/lib/debug/.build-id/80/e5dc1922d3eea9337df00dc8e7ebe8c4679563.debug drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/share/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-11-08 22:14 ./usr/share/doc/kallisto-dbgsym -> kallisto kallisto_0.46.1+dfsg-1_arm64.deb -------------------------------- new Debian package, version 2.0. size 220256 bytes: control archive=1128 bytes. 1309 bytes, 23 lines control 264 bytes, 4 lines md5sums Package: kallisto Version: 0.46.1+dfsg-1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 643 Depends: libc6 (>= 2.29), libgcc1 (>= 1:3.0), libhdf5-103, libhts2 (>= 1.4.1), libstdc++6 (>= 6), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://pachterlab.github.io/kallisto Description: near-optimal RNA-Seq quantification Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment. On benchmarks with standard RNA-Seq data, kallisto can quantify 30 million human reads in less than 3 minutes on a Mac desktop computer using only the read sequences and a transcriptome index that itself takes less than 10 minutes to build. Pseudoalignment of reads preserves the key information needed for quantification, and kallisto is therefore not only fast, but also as accurate than existing quantification tools. In fact, because the pseudoalignment procedure is robust to errors in the reads, in many benchmarks kallisto significantly outperforms existing tools. drwxr-xr-x root/root 0 2019-11-08 22:14 ./ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/bin/ -rwxr-xr-x root/root 644424 2019-11-08 22:14 ./usr/bin/kallisto drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/share/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-11-08 22:14 ./usr/share/doc/kallisto/ -rw-r--r-- root/root 323 2019-11-08 22:14 ./usr/share/doc/kallisto/README.test -rw-r--r-- root/root 297 2019-11-08 22:14 ./usr/share/doc/kallisto/changelog.Debian.gz -rw-r--r-- root/root 4059 2019-11-08 22:14 ./usr/share/doc/kallisto/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [544 B] Get:5 copy:/<>/apt_archive ./ Packages [631 B] Fetched 2138 B in 0s (96.8 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. Need to get 7314 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-3 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-3 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1+b1 [33.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.17-3 [524 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.30.1-1 [649 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.17-3 [881 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b2 [71.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libberkeleydb-perl amd64 0.62-1+b1 [124 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b4 [105 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.44-1 [223 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:29 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http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.20-1 [367 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.41-1 [79.0 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.74-1 [268 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.016-1+b2 [16.9 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b6 [33.6 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.004004-1 [266 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.80+repack-2+b1 [34.8 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.34.0 [1276 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7314 kB in 0s (35.0 MB/s) Selecting previously unselected package readline-common. 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Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up libio-async-perl (0.74-1) ... Setting up patchutils (0.3.4-2+b1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up liblinux-epoll-perl (0.016-1+b2) ... Setting up diffstat (1.62-1+b1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libipc-run-perl (20180523.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (5.6) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-3) ... Setting up liburi-perl (1.76-1) ... Setting up libnet-ssleay-perl (1.88-1+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-3) ... Setting up libtype-tiny-perl (1.004004-1) ... Setting up libnet-dns-perl (1.20-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-3+b4) ... Setting up gpgconf (2.2.17-3) ... Setting up libio-socket-ssl-perl (2.066-1) ... Setting up gpg (2.2.17-3) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.44-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.34.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for man-db (2.9.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 139588 Build-Time: 95 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 23 Job: kallisto_0.46.1+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: kallisto Package-Time: 137 Source-Version: 0.46.1+dfsg-1 Space: 139588 Status: successful Version: 0.46.1+dfsg-1 -------------------------------------------------------------------------------- Finished at 2019-11-09T21:41:57Z Build needed 00:02:17, 139588k disk space