sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kallisto 0.46.2+dfsg-2 (armel) Fri, 09 Oct 2020 05:22:58 +0000 | +==============================================================================+ Package: kallisto Version: 0.46.2+dfsg-2 Source Version: 0.46.2+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-351f8143-f5cd-4670-b973-c4a93e30283c' with '<>' I: NOTICE: Log filtering will replace 'build/kallisto-750b8i/resolver-Vl97w3' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-10-08-0809.25.pdiff [3143 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-10-08-1417.07.pdiff [9286 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-10-08-2014.53.pdiff [12.5 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-10-09-0215.41.pdiff [3639 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-10-08-0809.25.pdiff [2146 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-10-08-1417.07.pdiff [11.5 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-10-08-2014.53.pdiff [27.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-10-09-0215.41.pdiff [26.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-10-09-0215.41.pdiff [3639 B] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-10-09-0215.41.pdiff [26.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armel Packages [8068 kB] Fetched 8366 kB in 2s (5417 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: fakeroot libfakeroot 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 2048 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libfakeroot amd64 1.25.3-1 [47.0 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 fakeroot amd64 1.25.3-1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (9857 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10451 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1) over (1.25.2-1) ... Preparing to unpack .../fakeroot_1.25.3-1_amd64.deb ... Unpacking fakeroot (1.25.3-1) over (1.25.2-1) ... Setting up libfakeroot:amd64 (1.25.3-1) ... Setting up fakeroot (1.25.3-1) ... Processing triggers for libc-bin (2.31-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kallisto' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kallisto.git Please use: git clone https://salsa.debian.org/med-team/kallisto.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1085 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.2+dfsg-2 (dsc) [2111 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.2+dfsg-2 (tar) [1076 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kallisto 0.46.2+dfsg-2 (diff) [6324 B] Fetched 1085 kB in 0s (12.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kallisto-750b8i/kallisto-0.46.2+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kallisto-750b8i' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel Filtered Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64, libc-dev:armel, libstdc++-dev:armel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [413 B] Get:5 copy:/<>/apt_archive ./ Packages [501 B] Fetched 1871 B in 0s (76.6 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cmake cmake-data cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base hdf5-helpers:armel intltool-debian libaec-dev:armel libaec0:armel libarchive-zip-perl libarchive13 libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbrotli1:armel libbz2-1.0:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4 libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armel libdeflate0:armel libdpkg-perl libelf1 libexpat1 libffi7:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libgcrypt20:armel libgfortran5:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgpg-error0:armel libgssapi-krb5-2 libgssapi-krb5-2:armel libhdf5-103-1:armel libhdf5-cpp-103-1:armel libhdf5-dev:armel libhdf5-fortran-102:armel libhdf5-hl-100:armel libhdf5-hl-cpp-100:armel libhdf5-hl-fortran-100:armel libhogweed6:armel libhts-dev:armel libhts3:armel libicu67 libidn2-0:armel libio-string-perl libjpeg62-turbo:armel libjpeg62-turbo-dev:armel libjsoncpp1 libk5crypto3 libk5crypto3:armel libkeyutils1 libkeyutils1:armel libkrb5-3 libkrb5-3:armel libkrb5support0 libkrb5support0:armel libldap-2.4-2 libldap-2.4-2:armel liblocale-gettext-perl liblzma-dev:armel liblzma5:armel libmagic-mgc libmagic1 libncurses6 libnettle8:armel libnghttp2-14 libnghttp2-14:armel libp11-kit0:armel libperl5.30 libpipeline1 libprocps8 libpsl5 libpsl5:armel librhash0 librtmp1 librtmp1:armel libsasl2-2 libsasl2-2:armel libsasl2-modules-db libsasl2-modules-db:armel libsigsegv2 libssh2-1 libssh2-1:armel libssl1.1 libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libsz2:armel libtasn1-6:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.30 po-debconf procps sensible-utils ucf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc manpages-dev flex bison gdb-arm-linux-gnueabi gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:armel libc-l10n:armel locales:armel glibc-doc manpages-dev:armel libcurl4-doc:armel libgnutls28-dev:armel libidn11-dev:armel libkrb5-dev:armel libldap2-dev:armel librtmp-dev:armel libssh2-1-dev:armel pkg-config:armel gnupg git bzr rng-tools:armel gnutls-bin:armel krb5-doc krb5-user krb5-doc:armel krb5-user:armel libhdf5-doc:armel liblzma-doc:armel libstdc++-10-doc libstdc++-9-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:armel ca-certificates libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:armel krb5-locales krb5-locales:armel libldap-common libldap-common:armel libgpm2 publicsuffix publicsuffix:armel libsasl2-modules libsasl2-modules:armel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabi bsdextrautils build-essential cmake cmake-data cpp-10-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-10-arm-linux-gnueabi gcc-10-arm-linux-gnueabi-base gcc-10-base:armel gcc-10-cross-base gcc-9-base:armel gcc-arm-linux-gnueabi gettext gettext-base groff-base hdf5-helpers:armel intltool-debian libaec-dev:armel libaec0:armel libarchive-zip-perl libarchive13 libasan5:armel libasan6-armel-cross libatomic1:armel libatomic1-armel-cross libbrotli1 libbrotli1:armel libbz2-1.0:armel libc6:armel libc6-armel-cross libc6-dev libc6-dev:armel libc6-dev-armel-cross libcom-err2:armel libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:armel libcrypt1:armel libcurl3-gnutls:armel libcurl4 libcurl4-gnutls-dev:armel libdb5.3:armel libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:armel libdeflate0:armel libdpkg-perl libelf1 libexpat1 libffi7:armel libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-armel-cross libgcc-9-dev:armel libgcc-s1:armel libgcc-s1-armel-cross libgcrypt20:armel libgfortran5:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgomp1-armel-cross libgpg-error0:armel libgssapi-krb5-2 libgssapi-krb5-2:armel libhdf5-103-1:armel libhdf5-cpp-103-1:armel libhdf5-dev:armel libhdf5-fortran-102:armel libhdf5-hl-100:armel libhdf5-hl-cpp-100:armel libhdf5-hl-fortran-100:armel libhogweed6:armel libhts-dev:armel libhts3:armel libicu67 libidn2-0:armel libio-string-perl libjpeg62-turbo:armel libjpeg62-turbo-dev:armel libjsoncpp1 libk5crypto3 libk5crypto3:armel libkeyutils1 libkeyutils1:armel libkrb5-3 libkrb5-3:armel libkrb5support0 libkrb5support0:armel libldap-2.4-2 libldap-2.4-2:armel liblocale-gettext-perl liblzma-dev:armel liblzma5:armel libmagic-mgc libmagic1 libncurses6 libnettle8:armel libnghttp2-14 libnghttp2-14:armel libp11-kit0:armel libperl5.30 libpipeline1 libprocps8 libpsl5 libpsl5:armel librhash0 librtmp1 librtmp1:armel libsasl2-2 libsasl2-2:armel libsasl2-modules-db libsasl2-modules-db:armel libsigsegv2 libssh2-1 libssh2-1:armel libssl1.1 libssl1.1:armel libstdc++-10-dev libstdc++-10-dev-armel-cross libstdc++-9-dev:armel libstdc++6:armel libstdc++6-armel-cross libsub-override-perl libsz2:armel libtasn1-6:armel libtool libubsan1:armel libubsan1-armel-cross libuchardet0 libunistring2:armel libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:armel linux-libc-dev-armel-cross m4 man-db perl perl-modules-5.30 po-debconf procps sbuild-build-depends-main-dummy:armel sensible-utils ucf zlib1g:armel zlib1g-dev:armel 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. Need to get 124 MB of archives. After this operation, 482 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36-3+b1 [140 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-2 [1314 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main armel gcc-10-base armel 10.2.0-13 [199 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main armel gcc-9-base armel 9.3.0-18 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2+20200918-1 [102 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.16-5 [62.7 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.16-5 [262 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-4 [801 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.35.1-1 [2771 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.17-1 [104 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-3 [2395 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.0-13 [1738 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.0-13 [8670 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.0-1 [1644 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.5 [1473 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.5 [1909 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.18.2-1 [1725 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-4 [8624 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6 [692 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2 [342 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2 [287 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-10 [64.6 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-10 [115 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-10 [366 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-10 [156 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.53+dfsg-1 [231 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.41.0-3 [74.0 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.72.0-1 [336 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.10-1 [96.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3.1 [77.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.0-1 [124 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.39.0-1 [131 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.18.2-1 [5596 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi-base amd64 10.2.0-9cross1 [199 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [7526 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:10.2.0-1 [16.8 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.0-9cross1 [195 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.31-1cross2 [1136 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-armel-cross all 10.2.0-9cross1 [38.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 10.2.0-9cross1 [85.0 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 10.2.0-9cross1 [8800 B] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-armel-cross all 10.2.0-9cross1 [292 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 10.2.0-9cross1 [368 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 10.2.0-9cross1 [114 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-armel-cross all 10.2.0-9cross1 [688 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [15.0 MB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:10.2.0-1 [1456 B] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 5.7.6-1cross2 [1198 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.31-1cross2 [1936 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-armel-cross all 10.2.0-9cross1 [1746 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-arm-linux-gnueabi amd64 10.2.0-9cross1 [8190 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:10.2.0-1 [1176 B] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.8 [6640 B] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.2.1 [188 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.9.0-1 [15.2 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.181-1 [164 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.66.0-2 [1361 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.2.1 [1007 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main armel hdf5-helpers armel 1.10.6+repack-2 [40.0 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main armel libgcc-s1 armel 10.2.0-13 [38.3 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main armel libcrypt1 armel 1:4.4.17-1 [96.3 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.31-3 [2360 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main armel libaec0 armel 1.0.4-1 [19.8 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main armel libsz2 armel 1.0.4-1 [6692 B] Get:116 http://debian.oregonstate.edu/debian unstable/main armel libaec-dev armel 1.0.4-1 [17.8 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 9.3.0-18 [347 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 10.2.0-13 [9016 B] Get:119 http://debian.oregonstate.edu/debian unstable/main armel libbrotli1 armel 1.0.9-2 [280 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main armel libbz2-1.0 armel 1.0.8-4 [45.5 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 5.8.10-1 [1151 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main armel libcrypt-dev armel 1:4.4.17-1 [115 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.31-3 [1978 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main armel libcom-err2 armel 1.45.6-1 [71.0 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main armel libgmp10 armel 2:6.2.0+dfsg-6 [198 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main armel libnettle8 armel 3.6-2 [254 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main armel libhogweed6 armel 3.6-2 [300 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main armel libunistring2 armel 0.9.10-4 [359 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main armel libidn2-0 armel 2.3.0-1 [83.5 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main armel libffi7 armel 3.3-4 [19.7 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main armel libp11-kit0 armel 0.23.21-2 [314 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main armel libtasn1-6 armel 4.16.0-2 [49.8 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main armel libgnutls30 armel 3.6.15-4 [1119 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main armel libkrb5support0 armel 1.17-10 [61.6 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main armel libk5crypto3 armel 1.17-10 [113 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main armel libkeyutils1 armel 1.6.1-2 [14.5 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main armel libssl1.1 armel 1.1.1g-1 [1278 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main armel libkrb5-3 armel 1.17-10 [321 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main armel libgssapi-krb5-2 armel 1.17-10 [135 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main armel libdb5.3 armel 5.3.28+dfsg1-0.6 [572 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-modules-db armel 2.1.27+dfsg-2 [67.6 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-2 armel 2.1.27+dfsg-2 [98.7 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main armel libldap-2.4-2 armel 2.4.53+dfsg-1 [207 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main armel libnghttp2-14 armel 1.41.0-3 [63.1 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main armel libpsl5 armel 0.21.0-1.1 [54.1 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-2 [84.7 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main armel librtmp1 armel 2.4+20151223.gitfa8646d.1-2+b2 [55.1 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main armel libgpg-error0 armel 1.38-2 [67.6 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main armel libgcrypt20 armel 1.8.6-2 [486 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main armel libssh2-1 armel 1.8.0-2.1 [126 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main armel libcurl3-gnutls armel 7.72.0-1 [297 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main armel libcurl4-gnutls-dev armel 7.72.0-1 [391 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main armel libdeflate0 armel 1.6-1 [43.9 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main armel libdeflate-dev armel 1.6-1 [40.6 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 10.2.0-13 [87.0 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 10.2.0-13 [408 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 10.2.0-13 [115 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main armel libgcc-9-dev armel 9.3.0-18 [646 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main armel libgfortran5 armel 10.2.0-13 [248 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-103-1 armel 1.10.6+repack-2 [1189 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-cpp-103-1 armel 1.10.6+repack-2 [127 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-fortran-102 armel 1.10.6+repack-2 [92.3 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-100 armel 1.10.6+repack-2 [78.7 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-fortran-100 armel 1.10.6+repack-2 [49.6 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-hl-cpp-100 armel 1.10.6+repack-2 [37.0 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-2 [185 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main armel libjpeg62-turbo armel 1:2.0.5-1.1 [122 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main armel libjpeg62-turbo-dev armel 1:2.0.5-1.1 [241 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main armel libhdf5-dev armel 1.10.6+repack-2 [2451 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main armel liblzma5 armel 5.2.4-1+b1 [144 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main armel libhts3 armel 1.11-2 [322 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main armel liblzma-dev armel 5.2.4-1+b1 [204 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main armel libhts-dev armel 1.11-2 [3818 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-9-dev armel 9.3.0-18 [1746 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 124 MB in 5s (26.9 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10451 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36-3+b1_amd64.deb ... Unpacking bsdextrautils (2.36-3+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../006-libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:armel. Preparing to unpack .../009-gcc-10-base_10.2.0-13_armel.deb ... Unpacking gcc-10-base:armel (10.2.0-13) ... Selecting previously unselected package gcc-9-base:armel. Preparing to unpack .../010-gcc-9-base_9.3.0-18_armel.deb ... Unpacking gcc-9-base:armel (9.3.0-18) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../011-libncurses6_6.2+20200918-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20200918-1) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../012-libprocps8_2%3a3.3.16-5_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.16-5) ... Selecting previously unselected package procps. Preparing to unpack .../013-procps_2%3a3.3.16-5_amd64.deb ... Unpacking procps (2:3.3.16-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../014-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../015-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../016-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../017-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../018-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../019-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../020-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../021-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../022-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../023-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../024-automake_1%3a1.16.2-4_all.deb ... Unpacking automake (1:1.16.2-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../025-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-arm-linux-gnueabi. Preparing to unpack .../026-binutils-arm-linux-gnueabi_2.35.1-1_amd64.deb ... Unpacking binutils-arm-linux-gnueabi (2.35.1-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../027-libcrypt-dev_1%3a4.4.17-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.17-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../028-libc6-dev_2.31-3_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-3) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../029-libstdc++-10-dev_10.2.0-13_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.0-13) ... Selecting previously unselected package g++-10. Preparing to unpack .../030-g++-10_10.2.0-13_amd64.deb ... Unpacking g++-10 (10.2.0-13) ... Selecting previously unselected package g++. Preparing to unpack .../031-g++_4%3a10.2.0-1_amd64.deb ... Unpacking g++ (4:10.2.0-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../032-libdpkg-perl_1.20.5_all.deb ... Unpacking libdpkg-perl (1.20.5) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../033-dpkg-dev_1.20.5_all.deb ... Unpacking dpkg-dev (1.20.5) ... Selecting previously unselected package build-essential. Preparing to unpack .../034-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package cmake-data. Preparing to unpack .../035-cmake-data_3.18.2-1_all.deb ... Unpacking cmake-data (3.18.2-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../036-libicu67_67.1-4_amd64.deb ... Unpacking libicu67:amd64 (67.1-4) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../037-libxml2_2.9.10+dfsg-6_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../038-libarchive13_3.4.3-2_amd64.deb ... Unpacking libarchive13:amd64 (3.4.3-2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../039-libbrotli1_1.0.9-2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../040-libkrb5support0_1.17-10_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-10) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../041-libk5crypto3_1.17-10_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-10) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../042-libkeyutils1_1.6.1-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../043-libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../044-libkrb5-3_1.17-10_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../045-libgssapi-krb5-2_1.17-10_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-10) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../046-libsasl2-modules-db_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../047-libsasl2-2_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../048-libldap-2.4-2_2.4.53+dfsg-1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.53+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../049-libnghttp2-14_1.41.0-3_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.41.0-3) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../050-libpsl5_0.21.0-1.1_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../051-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../052-libssh2-1_1.8.0-2.1_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-2.1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../053-libcurl4_7.72.0-1_amd64.deb ... Unpacking libcurl4:amd64 (7.72.0-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../054-libexpat1_2.2.10-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-1) ... Selecting previously unselected package libjsoncpp1:amd64. Preparing to unpack .../055-libjsoncpp1_1.7.4-3.1_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3.1) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../056-librhash0_1.4.0-1_amd64.deb ... Unpacking librhash0:amd64 (1.4.0-1) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../057-libuv1_1.39.0-1_amd64.deb ... Unpacking libuv1:amd64 (1.39.0-1) ... Selecting previously unselected package cmake. Preparing to unpack .../058-cmake_3.18.2-1_amd64.deb ... Unpacking cmake (3.18.2-1) ... Selecting previously unselected package gcc-10-arm-linux-gnueabi-base:amd64. Preparing to unpack .../059-gcc-10-arm-linux-gnueabi-base_10.2.0-9cross1_amd64.deb ... Unpacking gcc-10-arm-linux-gnueabi-base:amd64 (10.2.0-9cross1) ... Selecting previously unselected package cpp-10-arm-linux-gnueabi. Preparing to unpack .../060-cpp-10-arm-linux-gnueabi_10.2.0-9cross1_amd64.deb ... Unpacking cpp-10-arm-linux-gnueabi (10.2.0-9cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabi. Preparing to unpack .../061-cpp-arm-linux-gnueabi_4%3a10.2.0-1_amd64.deb ... Unpacking cpp-arm-linux-gnueabi (4:10.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../062-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../063-gcc-10-cross-base_10.2.0-9cross1_all.deb ... Unpacking gcc-10-cross-base (10.2.0-9cross1) ... Selecting previously unselected package libc6-armel-cross. Preparing to unpack .../064-libc6-armel-cross_2.31-1cross2_all.deb ... Unpacking libc6-armel-cross (2.31-1cross2) ... Selecting previously unselected package libgcc-s1-armel-cross. Preparing to unpack .../065-libgcc-s1-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libgcc-s1-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libgomp1-armel-cross. Preparing to unpack .../066-libgomp1-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libgomp1-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libatomic1-armel-cross. Preparing to unpack .../067-libatomic1-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libatomic1-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libasan6-armel-cross. Preparing to unpack .../068-libasan6-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libasan6-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libstdc++6-armel-cross. Preparing to unpack .../069-libstdc++6-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libstdc++6-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libubsan1-armel-cross. Preparing to unpack .../070-libubsan1-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libubsan1-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package libgcc-10-dev-armel-cross. Preparing to unpack .../071-libgcc-10-dev-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libgcc-10-dev-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package gcc-10-arm-linux-gnueabi. Preparing to unpack .../072-gcc-10-arm-linux-gnueabi_10.2.0-9cross1_amd64.deb ... Unpacking gcc-10-arm-linux-gnueabi (10.2.0-9cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabi. Preparing to unpack .../073-gcc-arm-linux-gnueabi_4%3a10.2.0-1_amd64.deb ... Unpacking gcc-arm-linux-gnueabi (4:10.2.0-1) ... Selecting previously unselected package linux-libc-dev-armel-cross. Preparing to unpack .../074-linux-libc-dev-armel-cross_5.7.6-1cross2_all.deb ... Unpacking linux-libc-dev-armel-cross (5.7.6-1cross2) ... Selecting previously unselected package libc6-dev-armel-cross. Preparing to unpack .../075-libc6-dev-armel-cross_2.31-1cross2_all.deb ... Unpacking libc6-dev-armel-cross (2.31-1cross2) ... Selecting previously unselected package libstdc++-10-dev-armel-cross. Preparing to unpack .../076-libstdc++-10-dev-armel-cross_10.2.0-9cross1_all.deb ... Unpacking libstdc++-10-dev-armel-cross (10.2.0-9cross1) ... Selecting previously unselected package g++-10-arm-linux-gnueabi. Preparing to unpack .../077-g++-10-arm-linux-gnueabi_10.2.0-9cross1_amd64.deb ... Unpacking g++-10-arm-linux-gnueabi (10.2.0-9cross1) ... Selecting previously unselected package g++-arm-linux-gnueabi. Preparing to unpack .../078-g++-arm-linux-gnueabi_4%3a10.2.0-1_amd64.deb ... Unpacking g++-arm-linux-gnueabi (4:10.2.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../079-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../080-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../081-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../082-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../083-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../084-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../085-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../086-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../087-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../088-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../089-libfile-homedir-perl_1.006-1_all.deb ... Unpacking libfile-homedir-perl (1.006-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../090-libdebian-dpkgcross-perl_2.6.15-3.1_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3.1) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../091-dpkg-cross_2.6.15-3.1_all.deb ... Unpacking dpkg-cross (2.6.15-3.1) ... Selecting previously unselected package crossbuild-essential-armel. Preparing to unpack .../092-crossbuild-essential-armel_12.8_all.deb ... Unpacking crossbuild-essential-armel (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../093-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../094-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../095-libdebhelper-perl_13.2.1_all.deb ... Unpacking libdebhelper-perl (13.2.1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../096-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../097-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../098-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../099-dh-strip-nondeterminism_1.9.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.9.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../100-libelf1_0.181-1_amd64.deb ... Unpacking libelf1:amd64 (0.181-1) ... Selecting previously unselected package dwz. Preparing to unpack .../101-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../102-libglib2.0-0_2.66.0-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.66.0-2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../103-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../104-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../105-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../106-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../107-debhelper_13.2.1_all.deb ... Unpacking debhelper (13.2.1) ... Selecting previously unselected package hdf5-helpers:armel. Preparing to unpack .../108-hdf5-helpers_1.10.6+repack-2_armel.deb ... Unpacking hdf5-helpers:armel (1.10.6+repack-2) ... Selecting previously unselected package libgcc-s1:armel. Preparing to unpack .../109-libgcc-s1_10.2.0-13_armel.deb ... Unpacking libgcc-s1:armel (10.2.0-13) ... Selecting previously unselected package libcrypt1:armel. Preparing to unpack .../110-libcrypt1_1%3a4.4.17-1_armel.deb ... Unpacking libcrypt1:armel (1:4.4.17-1) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../111-libc6_2.31-3_armel.deb ... Unpacking libc6:armel (2.31-3) ... Selecting previously unselected package libaec0:armel. Preparing to unpack .../112-libaec0_1.0.4-1_armel.deb ... Unpacking libaec0:armel (1.0.4-1) ... Selecting previously unselected package libsz2:armel. Preparing to unpack .../113-libsz2_1.0.4-1_armel.deb ... Unpacking libsz2:armel (1.0.4-1) ... Selecting previously unselected package libaec-dev:armel. Preparing to unpack .../114-libaec-dev_1.0.4-1_armel.deb ... Unpacking libaec-dev:armel (1.0.4-1) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../115-libasan5_9.3.0-18_armel.deb ... Unpacking libasan5:armel (9.3.0-18) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../116-libatomic1_10.2.0-13_armel.deb ... Unpacking libatomic1:armel (10.2.0-13) ... Selecting previously unselected package libbrotli1:armel. Preparing to unpack .../117-libbrotli1_1.0.9-2_armel.deb ... Unpacking libbrotli1:armel (1.0.9-2) ... Selecting previously unselected package libbz2-1.0:armel. Preparing to unpack .../118-libbz2-1.0_1.0.8-4_armel.deb ... Unpacking libbz2-1.0:armel (1.0.8-4) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../119-linux-libc-dev_5.8.10-1_armel.deb ... Unpacking linux-libc-dev:armel (5.8.10-1) ... Selecting previously unselected package libcrypt-dev:armel. Preparing to unpack .../120-libcrypt-dev_1%3a4.4.17-1_armel.deb ... Unpacking libcrypt-dev:armel (1:4.4.17-1) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../121-libc6-dev_2.31-3_armel.deb ... Unpacking libc6-dev:armel (2.31-3) ... Selecting previously unselected package libcom-err2:armel. Preparing to unpack .../122-libcom-err2_1.45.6-1_armel.deb ... Unpacking libcom-err2:armel (1.45.6-1) ... Selecting previously unselected package libgmp10:armel. Preparing to unpack .../123-libgmp10_2%3a6.2.0+dfsg-6_armel.deb ... Unpacking libgmp10:armel (2:6.2.0+dfsg-6) ... Selecting previously unselected package libnettle8:armel. Preparing to unpack .../124-libnettle8_3.6-2_armel.deb ... Unpacking libnettle8:armel (3.6-2) ... Selecting previously unselected package libhogweed6:armel. Preparing to unpack .../125-libhogweed6_3.6-2_armel.deb ... Unpacking libhogweed6:armel (3.6-2) ... Selecting previously unselected package libunistring2:armel. Preparing to unpack .../126-libunistring2_0.9.10-4_armel.deb ... Unpacking libunistring2:armel (0.9.10-4) ... Selecting previously unselected package libidn2-0:armel. Preparing to unpack .../127-libidn2-0_2.3.0-1_armel.deb ... Unpacking libidn2-0:armel (2.3.0-1) ... Selecting previously unselected package libffi7:armel. Preparing to unpack .../128-libffi7_3.3-4_armel.deb ... Unpacking libffi7:armel (3.3-4) ... Selecting previously unselected package libp11-kit0:armel. Preparing to unpack .../129-libp11-kit0_0.23.21-2_armel.deb ... Unpacking libp11-kit0:armel (0.23.21-2) ... Selecting previously unselected package libtasn1-6:armel. Preparing to unpack .../130-libtasn1-6_4.16.0-2_armel.deb ... Unpacking libtasn1-6:armel (4.16.0-2) ... Selecting previously unselected package libgnutls30:armel. Preparing to unpack .../131-libgnutls30_3.6.15-4_armel.deb ... Unpacking libgnutls30:armel (3.6.15-4) ... Selecting previously unselected package libkrb5support0:armel. Preparing to unpack .../132-libkrb5support0_1.17-10_armel.deb ... Unpacking libkrb5support0:armel (1.17-10) ... Selecting previously unselected package libk5crypto3:armel. Preparing to unpack .../133-libk5crypto3_1.17-10_armel.deb ... Unpacking libk5crypto3:armel (1.17-10) ... Selecting previously unselected package libkeyutils1:armel. Preparing to unpack .../134-libkeyutils1_1.6.1-2_armel.deb ... Unpacking libkeyutils1:armel (1.6.1-2) ... Selecting previously unselected package libssl1.1:armel. Preparing to unpack .../135-libssl1.1_1.1.1g-1_armel.deb ... Unpacking libssl1.1:armel (1.1.1g-1) ... Selecting previously unselected package libkrb5-3:armel. Preparing to unpack .../136-libkrb5-3_1.17-10_armel.deb ... Unpacking libkrb5-3:armel (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:armel. Preparing to unpack .../137-libgssapi-krb5-2_1.17-10_armel.deb ... Unpacking libgssapi-krb5-2:armel (1.17-10) ... Selecting previously unselected package libdb5.3:armel. Preparing to unpack .../138-libdb5.3_5.3.28+dfsg1-0.6_armel.deb ... Unpacking libdb5.3:armel (5.3.28+dfsg1-0.6) ... Selecting previously unselected package libsasl2-modules-db:armel. Preparing to unpack .../139-libsasl2-modules-db_2.1.27+dfsg-2_armel.deb ... Unpacking libsasl2-modules-db:armel (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:armel. Preparing to unpack .../140-libsasl2-2_2.1.27+dfsg-2_armel.deb ... Unpacking libsasl2-2:armel (2.1.27+dfsg-2) ... Selecting previously unselected package libldap-2.4-2:armel. Preparing to unpack .../141-libldap-2.4-2_2.4.53+dfsg-1_armel.deb ... Unpacking libldap-2.4-2:armel (2.4.53+dfsg-1) ... Selecting previously unselected package libnghttp2-14:armel. Preparing to unpack .../142-libnghttp2-14_1.41.0-3_armel.deb ... Unpacking libnghttp2-14:armel (1.41.0-3) ... Selecting previously unselected package libpsl5:armel. Preparing to unpack .../143-libpsl5_0.21.0-1.1_armel.deb ... Unpacking libpsl5:armel (0.21.0-1.1) ... Selecting previously unselected package zlib1g:armel. Preparing to unpack .../144-zlib1g_1%3a1.2.11.dfsg-2_armel.deb ... Unpacking zlib1g:armel (1:1.2.11.dfsg-2) ... Selecting previously unselected package librtmp1:armel. Preparing to unpack .../145-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armel.deb ... Unpacking librtmp1:armel (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libgpg-error0:armel. Preparing to unpack .../146-libgpg-error0_1.38-2_armel.deb ... Unpacking libgpg-error0:armel (1.38-2) ... Selecting previously unselected package libgcrypt20:armel. Preparing to unpack .../147-libgcrypt20_1.8.6-2_armel.deb ... Unpacking libgcrypt20:armel (1.8.6-2) ... Selecting previously unselected package libssh2-1:armel. Preparing to unpack .../148-libssh2-1_1.8.0-2.1_armel.deb ... Unpacking libssh2-1:armel (1.8.0-2.1) ... Selecting previously unselected package libcurl3-gnutls:armel. Preparing to unpack .../149-libcurl3-gnutls_7.72.0-1_armel.deb ... Unpacking libcurl3-gnutls:armel (7.72.0-1) ... Selecting previously unselected package libcurl4-gnutls-dev:armel. Preparing to unpack .../150-libcurl4-gnutls-dev_7.72.0-1_armel.deb ... Unpacking libcurl4-gnutls-dev:armel (7.72.0-1) ... Selecting previously unselected package libdeflate0:armel. Preparing to unpack .../151-libdeflate0_1.6-1_armel.deb ... Unpacking libdeflate0:armel (1.6-1) ... Selecting previously unselected package libdeflate-dev:armel. Preparing to unpack .../152-libdeflate-dev_1.6-1_armel.deb ... Unpacking libdeflate-dev:armel (1.6-1) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../153-libgomp1_10.2.0-13_armel.deb ... Unpacking libgomp1:armel (10.2.0-13) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../154-libstdc++6_10.2.0-13_armel.deb ... Unpacking libstdc++6:armel (10.2.0-13) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../155-libubsan1_10.2.0-13_armel.deb ... Unpacking libubsan1:armel (10.2.0-13) ... Selecting previously unselected package libgcc-9-dev:armel. Preparing to unpack .../156-libgcc-9-dev_9.3.0-18_armel.deb ... Unpacking libgcc-9-dev:armel (9.3.0-18) ... Selecting previously unselected package libgfortran5:armel. Preparing to unpack .../157-libgfortran5_10.2.0-13_armel.deb ... Unpacking libgfortran5:armel (10.2.0-13) ... Selecting previously unselected package libhdf5-103-1:armel. Preparing to unpack .../158-libhdf5-103-1_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-103-1:armel (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-cpp-103-1:armel. Preparing to unpack .../159-libhdf5-cpp-103-1_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-cpp-103-1:armel (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-fortran-102:armel. Preparing to unpack .../160-libhdf5-fortran-102_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-fortran-102:armel (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-100:armel. Preparing to unpack .../161-libhdf5-hl-100_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-hl-100:armel (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-fortran-100:armel. Preparing to unpack .../162-libhdf5-hl-fortran-100_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-hl-fortran-100:armel (1.10.6+repack-2) ... Selecting previously unselected package libhdf5-hl-cpp-100:armel. Preparing to unpack .../163-libhdf5-hl-cpp-100_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-hl-cpp-100:armel (1.10.6+repack-2) ... Selecting previously unselected package zlib1g-dev:armel. Preparing to unpack .../164-zlib1g-dev_1%3a1.2.11.dfsg-2_armel.deb ... Unpacking zlib1g-dev:armel (1:1.2.11.dfsg-2) ... Selecting previously unselected package libjpeg62-turbo:armel. Preparing to unpack .../165-libjpeg62-turbo_1%3a2.0.5-1.1_armel.deb ... Unpacking libjpeg62-turbo:armel (1:2.0.5-1.1) ... Selecting previously unselected package libjpeg62-turbo-dev:armel. Preparing to unpack .../166-libjpeg62-turbo-dev_1%3a2.0.5-1.1_armel.deb ... Unpacking libjpeg62-turbo-dev:armel (1:2.0.5-1.1) ... Selecting previously unselected package libhdf5-dev:armel. Preparing to unpack .../167-libhdf5-dev_1.10.6+repack-2_armel.deb ... Unpacking libhdf5-dev:armel (1.10.6+repack-2) ... Selecting previously unselected package liblzma5:armel. Preparing to unpack .../168-liblzma5_5.2.4-1+b1_armel.deb ... Unpacking liblzma5:armel (5.2.4-1+b1) ... Selecting previously unselected package libhts3:armel. Preparing to unpack .../169-libhts3_1.11-2_armel.deb ... Unpacking libhts3:armel (1.11-2) ... Selecting previously unselected package liblzma-dev:armel. Preparing to unpack .../170-liblzma-dev_5.2.4-1+b1_armel.deb ... Unpacking liblzma-dev:armel (5.2.4-1+b1) ... Selecting previously unselected package libhts-dev:armel. Preparing to unpack .../171-libhts-dev_1.11-2_armel.deb ... Unpacking libhts-dev:armel (1.11-2) ... Selecting previously unselected package libstdc++-9-dev:armel. Preparing to unpack .../172-libstdc++-9-dev_9.3.0-18_armel.deb ... Unpacking libstdc++-9-dev:armel (9.3.0-18) ... Selecting previously unselected package sbuild-build-depends-main-dummy:armel. Preparing to unpack .../173-sbuild-build-depends-main-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libexpat1:amd64 (2.2.10-1) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libkeyutils1:amd64 (1.6.1-2) ... Setting up libpsl5:amd64 (0.21.0-1.1) ... Setting up binutils-arm-linux-gnueabi (2.35.1-1) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up bsdextrautils (2.36-3+b1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers:armel (1.10.6+repack-2) ... Setting up libicu67:amd64 (67.1-4) ... Setting up libmagic-mgc (1:5.38-5) ... Setting up libglib2.0-0:amd64 (2.66.0-2) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1g-1) ... Setting up libbrotli1:amd64 (1.0.9-2) ... Setting up libnghttp2-14:amd64 (1.41.0-3) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up linux-libc-dev:armel (5.8.10-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-5) ... Setting up gcc-10-arm-linux-gnueabi-base:amd64 (10.2.0-9cross1) ... Setting up libkrb5support0:amd64 (1.17-10) ... Setting up linux-libc-dev-armel-cross (5.7.6-1cross2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up gcc-10-base:armel (10.2.0-13) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up libuv1:amd64 (1.39.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:amd64 (6.2+20200918-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libk5crypto3:amd64 (1.17-10) ... Setting up gcc-10-cross-base (10.2.0-9cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libc6-armel-cross (2.31-1cross2) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up librhash0:amd64 (1.4.0-1) ... Setting up libcrypt-dev:amd64 (1:4.4.17-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.31-3) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.18.2-1) ... Setting up libkrb5-3:amd64 (1.17-10) ... Setting up libc6-dev-armel-cross (2.31-1cross2) ... Setting up libelf1:amd64 (0.181-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libprocps8:amd64 (2:3.3.16-5) ... Setting up libjsoncpp1:amd64 (1.7.4-3.1) ... Setting up cpp-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up gcc-9-base:armel (9.3.0-18) ... Setting up libstdc++-10-dev:amd64 (10.2.0-13) ... Setting up g++-10 (10.2.0-13) ... Setting up libgomp1-armel-cross (10.2.0-9cross1) ... Setting up libtool (2.4.6-14) ... Setting up libarchive13:amd64 (3.4.3-2) ... Setting up libgcc-s1-armel-cross (10.2.0-9cross1) ... Setting up libldap-2.4-2:amd64 (2.4.53+dfsg-1) ... Setting up m4 (1.4.18-4) ... Setting up libstdc++6-armel-cross (10.2.0-9cross1) ... Setting up libatomic1-armel-cross (10.2.0-9cross1) ... Setting up perl (5.30.3-4) ... Setting up cpp-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libubsan1-armel-cross (10.2.0-9cross1) ... Setting up libgssapi-krb5-2:amd64 (1.17-10) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.5) ... Setting up autoconf (2.69-11.1) ... Setting up g++ (4:10.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up procps (2:3.3.16-5) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libcurl4:amd64 (7.72.0-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libasan6-armel-cross (10.2.0-9cross1) ... Setting up automake (1:1.16.2-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgcc-10-dev-armel-cross (10.2.0-9cross1) ... Setting up libdebhelper-perl (13.2.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cmake (3.18.2-1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up gcc-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libstdc++-10-dev-armel-cross (10.2.0-9cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up gcc-arm-linux-gnueabi (4:10.2.0-1) ... Setting up g++-10-arm-linux-gnueabi (10.2.0-9cross1) ... Setting up g++-arm-linux-gnueabi (4:10.2.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-armel (12.8) ... Setting up libcrypt1:armel (1:4.4.17-1) ... Setting up libgcc-s1:armel (10.2.0-13) ... Setting up dh-autoreconf (19) ... Setting up libc6:armel (2.31-3) ... Setting up libcrypt-dev:armel (1:4.4.17-1) ... Setting up libtasn1-6:armel (4.16.0-2) ... Setting up libc6-dev:armel (2.31-3) ... Setting up libbz2-1.0:armel (1.0.8-4) ... Setting up libdb5.3:armel (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:armel (10.2.0-13) ... Setting up libkeyutils1:armel (1.6.1-2) ... Setting up liblzma5:armel (5.2.4-1+b1) ... Setting up libgpg-error0:armel (1.38-2) ... Setting up libssl1.1:armel (1.1.1g-1) ... Setting up libbrotli1:armel (1.0.9-2) ... Setting up libffi7:armel (3.3-4) ... Setting up libnghttp2-14:armel (1.41.0-3) ... Setting up libunistring2:armel (0.9.10-4) ... Setting up libdeflate0:armel (1.6-1) ... Setting up libgcrypt20:armel (1.8.6-2) ... Setting up debhelper (13.2.1) ... Setting up zlib1g:armel (1:1.2.11.dfsg-2) ... Setting up libidn2-0:armel (2.3.0-1) ... Setting up libcom-err2:armel (1.45.6-1) ... Setting up libgomp1:armel (10.2.0-13) ... Setting up libaec0:armel (1.0.4-1) ... Setting up libkrb5support0:armel (1.17-10) ... Setting up libsasl2-modules-db:armel (2.1.27+dfsg-2) ... Setting up libasan5:armel (9.3.0-18) ... Setting up libjpeg62-turbo:armel (1:2.0.5-1.1) ... Setting up libnettle8:armel (3.6-2) ... Setting up libjpeg62-turbo-dev:armel (1:2.0.5-1.1) ... Setting up libgmp10:armel (2:6.2.0+dfsg-6) ... Setting up libp11-kit0:armel (0.23.21-2) ... Setting up libatomic1:armel (10.2.0-13) ... Setting up libk5crypto3:armel (1.17-10) ... Setting up libsasl2-2:armel (2.1.27+dfsg-2) ... Setting up libgfortran5:armel (10.2.0-13) ... Setting up liblzma-dev:armel (5.2.4-1+b1) ... Setting up libubsan1:armel (10.2.0-13) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-2) ... Setting up libssh2-1:armel (1.8.0-2.1) ... Setting up libkrb5-3:armel (1.17-10) ... Setting up libdeflate-dev:armel (1.6-1) ... Setting up libsz2:armel (1.0.4-1) ... Setting up libpsl5:armel (0.21.0-1.1) ... Setting up libhogweed6:armel (3.6-2) ... Setting up libaec-dev:armel (1.0.4-1) ... Setting up libgcc-9-dev:armel (9.3.0-18) ... Setting up libgnutls30:armel (3.6.15-4) ... Setting up librtmp1:armel (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:armel (1.17-10) ... Setting up libhdf5-103-1:armel (1.10.6+repack-2) ... Setting up libhdf5-cpp-103-1:armel (1.10.6+repack-2) ... Setting up libhdf5-hl-100:armel (1.10.6+repack-2) ... Setting up libstdc++-9-dev:armel (9.3.0-18) ... Setting up libldap-2.4-2:armel (2.4.53+dfsg-1) ... Setting up libcurl3-gnutls:armel (7.72.0-1) ... Setting up libcurl4-gnutls-dev:armel (7.72.0-1) ... Setting up libhdf5-hl-cpp-100:armel (1.10.6+repack-2) ... Setting up libhdf5-fortran-102:armel (1.10.6+repack-2) ... Setting up libhdf5-hl-fortran-100:armel (1.10.6+repack-2) ... Setting up libhts3:armel (1.11-2) ... Setting up libhts-dev:armel (1.11-2) ... Setting up libhdf5-dev:armel (1.10.6+repack-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabi/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabi/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up sbuild-build-depends-main-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.31-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-11-amd64 #1 SMP Debian 4.19.146-1 (2020-09-17) amd64 (x86_64) Toolchain package versions: binutils_2.35.1-1 dpkg-dev_1.20.5 g++-10_10.2.0-13 gcc-10_10.2.0-13 libc6-dev_2.31-3 libstdc++-10-dev_10.2.0-13 libstdc++-10-dev-armel-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-13 libstdc++6-armel-cross_10.2.0-9cross1 linux-libc-dev_5.8.10-1 Package versions: adduser_3.118 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-7 binutils_2.35.1-1 binutils-arm-linux-gnueabi_2.35.1-1 binutils-common_2.35.1-1 binutils-x86-64-linux-gnu_2.35.1-1 bsdextrautils_2.36-3+b1 bsdutils_1:2.36-3+b1 build-essential_12.8 bzip2_1.0.8-4 cmake_3.18.2-1 cmake-data_3.18.2-1 coreutils_8.32-4+b1 cpp_4:10.2.0-1 cpp-10_10.2.0-13 cpp-10-arm-linux-gnueabi_10.2.0-9cross1 cpp-8_8.4.0-4 cpp-arm-linux-gnueabi_4:10.2.0-1 cross-config_2.6.15-3.1 crossbuild-essential-armel_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debian-archive-keyring_2019.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dpkg_1.20.5 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.5 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3+b1 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.2.0-1 g++-10_10.2.0-13 g++-10-arm-linux-gnueabi_10.2.0-9cross1 g++-arm-linux-gnueabi_4:10.2.0-1 gcc_4:10.2.0-1 gcc-10_10.2.0-13 gcc-10-arm-linux-gnueabi_10.2.0-9cross1 gcc-10-arm-linux-gnueabi-base_10.2.0-9cross1 gcc-10-base_10.2.0-13 gcc-10-cross-base_10.2.0-9cross1 gcc-8-base_8.4.0-4 gcc-9-base_9.3.0-18 gcc-arm-linux-gnueabi_4:10.2.0-1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hdf5-helpers_1.10.6+repack-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan5_9.3.0-18 libasan6_10.2.0-13 libasan6-armel-cross_10.2.0-9cross1 libatomic1_10.2.0-13 libatomic1-armel-cross_10.2.0-9cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.35.1-1 libblkid1_2.36-3+b1 libbrotli1_1.0.9-2 libbz2-1.0_1.0.8-4 libc-bin_2.31-3 libc-dev-bin_2.31-3 libc6_2.31-3 libc6-armel-cross_2.31-1cross2 libc6-dev_2.31-3 libc6-dev-armel-cross_2.31-1cross2 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-13 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-1 libctf0_2.35.1-1 libcurl3-gnutls_7.72.0-1 libcurl4_7.72.0-1 libcurl4-gnutls-dev_7.72.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.254 libdebhelper-perl_13.2.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdeflate-dev_1.6-1 libdeflate0_1.6-1 libdpkg-perl_1.20.5 libelf1_0.181-1 libexpat1_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3+b1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.9.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.0-13 libgcc-10-dev-armel-cross_10.2.0-9cross1 libgcc-9-dev_9.3.0-18 libgcc-s1_10.2.0-13 libgcc-s1-armel-cross_10.2.0-9cross1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-13 libglib2.0-0_2.66.0-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-13 libgomp1-armel-cross_10.2.0-9cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhdf5-103-1_1.10.6+repack-2 libhdf5-cpp-103-1_1.10.6+repack-2 libhdf5-dev_1.10.6+repack-2 libhdf5-fortran-102_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhdf5-hl-cpp-100_1.10.6+repack-2 libhdf5-hl-fortran-100_1.10.6+repack-2 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.6-2 libhts-dev_1.11-2 libhts3_1.11-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.2.0-13 libjpeg62-turbo_1:2.0.5-1.1 libjpeg62-turbo-dev_1:2.0.5-1.1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.53+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10.2.0-13 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3+b1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-4 libncurses6_6.2+20200918-1 libncursesw6_6.2+20200918-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.6-2 libnghttp2-14_1.41.0-3 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libquadmath0_10.2.0-13 librhash0_1.4.0-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.4-1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3+b1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-13 libstdc++-10-dev-armel-cross_10.2.0-9cross1 libstdc++-9-dev_9.3.0-18 libstdc++6_10.2.0-13 libstdc++6-armel-cross_10.2.0-9cross1 libsub-override-perl_0.09-2 libsystemd0_246.6-1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20200918-1 libtool_2.4.6-14 libtsan0_10.2.0-13 libubsan1_10.2.0-13 libubsan1-armel-cross_10.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_246.6-1 libunistring2_0.9.10-4 libuuid1_2.36-3+b1 libuv1_1.39.0-1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.10-1 linux-libc-dev-armel-cross_5.7.6-1cross2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3+b1 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 po-debconf_1.0.21 procps_2:3.3.16-5 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.36-3+b1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: kallisto Binary: kallisto, kallisto-examples Architecture: any all Version: 0.46.2+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://pachterlab.github.io/kallisto Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/kallisto Vcs-Git: https://salsa.debian.org/med-team/kallisto.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), cmake, libhdf5-dev, libhts-dev Package-List: kallisto deb science optional arch=any kallisto-examples deb science optional arch=all Checksums-Sha1: 9cd6f32f91c9b65e54f0d86de9f67ce1c988d1ae 1076104 kallisto_0.46.2+dfsg.orig.tar.xz d9eabef16e3666afa5b07d9f96c25c575869bf81 6324 kallisto_0.46.2+dfsg-2.debian.tar.xz Checksums-Sha256: b92d212294147e371fc9e77190e6384b3101045af1f832d144101285791b29db 1076104 kallisto_0.46.2+dfsg.orig.tar.xz 536a062673108723ebd7158464448fbd996af60e7764b64977a19ba4108b39af 6324 kallisto_0.46.2+dfsg-2.debian.tar.xz Files: 0e8ff786acae328e36281ad930529f98 1076104 kallisto_0.46.2+dfsg.orig.tar.xz 0829a5b73df3c7816698e4d6b32bce93 6324 kallisto_0.46.2+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6/eWoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFprQ//WF28hxL9KqPfL3r8KtA80yr6oTjxdnnT io51YJaKS1tSb70+oi7ZIy6RSZlwnvRhJAFlsn7GnfualVsle1ycyB/2YLYOKEhQ Ew1x1DGUdLqg8t8R7Cna+l2/iy5TINzyiA2OKF+MFlQ4B8o6+i3rhhmgnPkCOorJ rGBTt9b4LOcIpJhvS8PIN05Msbf2AhcOLZJwqA9wEBbOONDXWMls21AkjRIRzyXf 3RJ/PqAhizlj3tuexpAkfbTHUvOahH802JDpG49X8zy9c4i4A7cusp6MRjEDubud smV77fc+geayNRpUvsLBmgR92PmjYvfbUqFTC7KC+gpL7AXoi7ACttNMianGMluO Y/UEv98iKTAgUr7ml0NplAXBkveS5ZooyzBERSkGDhYifElpc6woQ1V1LSFHbPGN pYCTsM7KuZUT5ezcrqS0kWmLMTnNU3duhuKTsLshMaZ7ix4e8S75BS/8NODWQasq 1spJ1r0TS06AAeqkVllubpaWMUuQOT23xQnjaEOl+II7YBGUeynmducWxgiCjHCf sOCUZL0HqVUuWe7l6hoXMeM1maDO2eSI2OeOfyLoCxmP/xMgJ+341x5N/gojI+LN MOzBz+91SSYDptkYKqNrFLOu8uJtQx0L/SIj2wz5h2kArybR6g2/HjSgEvSvrlGd jmZbokRFzls= =PcMa -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.ar6xbLZc/trustedkeys.kbx': General error gpgv: Signature made Sat May 16 05:26:02 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kallisto_0.46.2+dfsg-2.dsc dpkg-source: info: extracting kallisto in /<> dpkg-source: info: unpacking kallisto_0.46.2+dfsg.orig.tar.xz dpkg-source: info: unpacking kallisto_0.46.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_htslib.patch dpkg-source: info: applying spelling dpkg-source: info: applying htslib1.3 dpkg-source: info: applying Check_busOptions.seq_length_before_accessing.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-351f8143-f5cd-4670-b973-c4a93e30283c SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -aarmel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kallisto dpkg-buildpackage: info: source version 0.46.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pranav Ballaney dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DDEBIAN_BUILD=1 -DLINK=shared cd obj-arm-linux-gnueabi && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=armv7l -DCMAKE_C_COMPILER=arm-linux-gnueabi-gcc -DCMAKE_CXX_COMPILER=arm-linux-gnueabi-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/arm-linux-gnueabi-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/arm-linux-gnueabi-qmake -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabi -DDEBIAN_BUILD=1 -DLINK=shared .. -- The C compiler identification is GNU 10.2.0 -- The CXX compiler identification is GNU 10.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/arm-linux-gnueabi-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabi-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done shared build -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found ZLIB: /usr/lib/arm-linux-gnueabi/libz.so (found version "1.2.11") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-arm-linux-gnueabi make[1]: Leaving directory '/<>' dh_auto_build -a cd obj-arm-linux-gnueabi && make -j1 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles /<>/obj-arm-linux-gnueabi//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/src /<>/obj-arm-linux-gnueabi/src/CMakeFiles/kallisto_core.dir/DependInfo.cmake --color= Scanning dependencies of target kallisto_core make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 4%] Building CXX object src/CMakeFiles/kallisto_core.dir/BUSData.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/BUSData.cpp.o -c /<>/src/BUSData.cpp [ 9%] Building CXX object src/CMakeFiles/kallisto_core.dir/BUSTools.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/BUSTools.cpp.o -c /<>/src/BUSTools.cpp [ 14%] Building CXX object src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o -c /<>/src/Bootstrap.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/Bootstrap.h:7, from /<>/src/Bootstrap.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PlaintextWriter.h:13, from /<>/src/Bootstrap.cpp:2: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/Bootstrap.h:7, from /<>/src/Bootstrap.cpp:1: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/Bootstrap.h:7, from /<>/src/Bootstrap.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/KmerIndex.h:7, from /<>/src/Bootstrap.h:7, from /<>/src/Bootstrap.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void std::discrete_distribution<_IntType>::param_type::_M_initialize() [with _IntType = int]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 19%] Building CXX object src/CMakeFiles/kallisto_core.dir/GeneModel.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/GeneModel.cpp.o -c /<>/src/GeneModel.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/GeneModel.h:10, from /<>/src/GeneModel.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/GeneModel.cpp:1: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/GeneModel.h:10, from /<>/src/GeneModel.cpp:1: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ [ 23%] Building CXX object src/CMakeFiles/kallisto_core.dir/H5Writer.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/H5Writer.cpp.o -c /<>/src/H5Writer.cpp [ 28%] Building CXX object src/CMakeFiles/kallisto_core.dir/Kmer.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Kmer.cpp.o -c /<>/src/Kmer.cpp [ 33%] Building CXX object src/CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o -c /<>/src/KmerIndex.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/KmerIndex.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:218:13: required from ‘void KmerHashTable::reserve(size_t, bool) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerIndex.cpp:848:32: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/KmerIndex.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Kmer&}; _Tp = Kmer; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Kmer}; _Tp = Kmer; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/KmerIndex.h:7, from /<>/src/KmerIndex.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void KmerIndex::BuildDeBruijnGraph(const ProgramOptions&, const std::vector >&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/KmerIndex.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/KmerIndex.h:7, from /<>/src/KmerIndex.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o -c /<>/src/KmerIterator.cpp [ 42%] Building CXX object src/CMakeFiles/kallisto_core.dir/Merge.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/Merge.cpp.o -c /<>/src/Merge.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/Merge.cpp:11: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/Merge.cpp:5: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/Merge.cpp:5: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘bool MergeBatchDirectories(const ProgramOptions&, int&, int64_t&, int64_t&, int64_t&, int&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/kallisto_core.dir/MinCollector.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/MinCollector.cpp.o -c /<>/src/MinCollector.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/MinCollector.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] [ 52%] Building CXX object src/CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o -c /<>/src/PlaintextWriter.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/PlaintextWriter.h:12, from /<>/src/PlaintextWriter.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PlaintextWriter.h:13, from /<>/src/PlaintextWriter.cpp:1: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/PlaintextWriter.h:12, from /<>/src/PlaintextWriter.cpp:1: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ [ 57%] Building CXX object src/CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o -c /<>/src/ProcessReads.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/ProcessReads.cpp:22: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PseudoBam.h:13, from /<>/src/ProcessReads.h:21, from /<>/src/ProcessReads.cpp:22: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/ProcessReads.cpp:22: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:61, from /usr/arm-linux-gnueabi/include/c++/10/algorithm:62, from /<>/src/ProcessReads.h:9, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::pair)> >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/algorithm:62, from /<>/src/ProcessReads.h:9, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter, std::pair)> >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1819 | __unguarded_linear_insert(_RandomAccessIterator __last, | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::pair)> >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1839 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter, std::pair)> >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1945 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/ProcessReads.h:7, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const bam1_t&}; _Tp = bam1_t; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BUSData&}; _Tp = BUSData; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {PseudoAlignmentInfo}; _Tp = PseudoAlignmentInfo; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {PseudoAlignmentInfo}; _Tp = PseudoAlignmentInfo; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/ProcessReads.h:7, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void MasterProcessor::processAln(const EMAlgorithm&, bool)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/ProcessReads.h:7, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/algorithm:62, from /<>/src/ProcessReads.h:9, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1974 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1975 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1976 | __comp); | ~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1891 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/ProcessReads.h:7, from /<>/src/ProcessReads.cpp:22: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void BUSProcessor::processBuffer()’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void AlnProcessor::processBufferTrans()’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void MasterProcessor::update(const std::vector&, const std::vector >&, std::vector > >&, std::vector, std::__cxx11::basic_string > >&, int, std::vector&, std::vector&, const PseudoAlignmentBatch&, std::vector&, std::vector > >, int*, int*, int, int)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void AlnProcessor::processBufferGenome()’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 61%] Building CXX object src/CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o -c /<>/src/PseudoBam.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/PseudoBam.h:12, from /<>/src/PseudoBam.cpp:3: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PseudoBam.h:13, from /<>/src/PseudoBam.cpp:3: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/PseudoBam.h:12, from /<>/src/PseudoBam.cpp:3: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/PseudoBam.h:5, from /<>/src/PseudoBam.cpp:3: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {PseudoAlignmentInfo}; _Tp = PseudoAlignmentInfo; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In function ‘void readPseudoAlignmentBatch(std::ifstream&, PseudoAlignmentBatch&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/kallisto_core.dir/common.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/common.cpp.o -c /<>/src/common.cpp [ 71%] Building CXX object src/CMakeFiles/kallisto_core.dir/h5utils.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/h5utils.cpp.o -c /<>/src/h5utils.cpp [ 76%] Building CXX object src/CMakeFiles/kallisto_core.dir/hash.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/hash.cpp.o -c /<>/src/hash.cpp [ 80%] Building CXX object src/CMakeFiles/kallisto_core.dir/main.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/main.cpp.o -c /<>/src/main.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/main.cpp:17: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PseudoBam.h:13, from /<>/src/ProcessReads.h:21, from /<>/src/main.cpp:17: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/main.cpp:17: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /usr/arm-linux-gnueabi/include/c++/10/bits/random.h:34, from /usr/arm-linux-gnueabi/include/c++/10/random:49, from /<>/src/main.cpp:3: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /usr/arm-linux-gnueabi/include/c++/10/bits/random.h:34, from /usr/arm-linux-gnueabi/include/c++/10/random:49, from /<>/src/main.cpp:3: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void std::discrete_distribution<_IntType>::param_type::_M_initialize() [with _IntType = int]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object src/CMakeFiles/kallisto_core.dir/weights.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto_core.dir/weights.cpp.o -c /<>/src/weights.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/KmerIndex.h:7, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘std::vector calc_eff_lens(const std::vector&, double)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘std::vector calc_eff_lens(const std::vector&, const std::vector&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘std::vector get_frag_len_means(const std::vector&, const std::vector&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /<>/src/KmerIndex.h:7, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘std::vector update_eff_lens(const std::vector&, const MinCollector&, const KmerIndex&, const std::vector&, const std::vector&, std::vector&, const ProgramOptions&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /<>/src/KmerIndex.h:7, from /<>/src/weights.h:4, from /<>/src/weights.cpp:1: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In function ‘WeightMap calc_weights(const std::vector&, const EcMap&, const std::vector&)’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 90%] Linking CXX static library libkallisto_core.a cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/cmake -P CMakeFiles/kallisto_core.dir/cmake_clean_target.cmake cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/kallisto_core.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-ar qc libkallisto_core.a CMakeFiles/kallisto_core.dir/BUSData.cpp.o CMakeFiles/kallisto_core.dir/BUSTools.cpp.o CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o CMakeFiles/kallisto_core.dir/GeneModel.cpp.o CMakeFiles/kallisto_core.dir/H5Writer.cpp.o CMakeFiles/kallisto_core.dir/Kmer.cpp.o CMakeFiles/kallisto_core.dir/KmerIndex.cpp.o CMakeFiles/kallisto_core.dir/KmerIterator.cpp.o CMakeFiles/kallisto_core.dir/Merge.cpp.o CMakeFiles/kallisto_core.dir/MinCollector.cpp.o CMakeFiles/kallisto_core.dir/PlaintextWriter.cpp.o CMakeFiles/kallisto_core.dir/ProcessReads.cpp.o CMakeFiles/kallisto_core.dir/PseudoBam.cpp.o CMakeFiles/kallisto_core.dir/common.cpp.o CMakeFiles/kallisto_core.dir/h5utils.cpp.o CMakeFiles/kallisto_core.dir/hash.cpp.o CMakeFiles/kallisto_core.dir/main.cpp.o CMakeFiles/kallisto_core.dir/weights.cpp.o /usr/bin/arm-linux-gnueabi-ranlib libkallisto_core.a make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 90%] Built target kallisto_core make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/src /<>/obj-arm-linux-gnueabi/src/CMakeFiles/kallisto.dir/DependInfo.cmake --color= Scanning dependencies of target kallisto make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' [ 95%] Building CXX object src/CMakeFiles/kallisto.dir/main.cpp.o cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/arm-linux-gnueabi-g++ -I/<>/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -o CMakeFiles/kallisto.dir/main.cpp.o -c /<>/src/main.cpp In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/main.cpp:17: /<>/src/KmerHashTable.h: In member function ‘size_t KmerHashTable::rndup(size_t)’: /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /<>/src/PseudoBam.h:13, from /<>/src/ProcessReads.h:21, from /<>/src/main.cpp:17: /<>/src/GeneModel.h: In member function ‘std::size_t std::hash >::operator()(const std::pair&) const’: /<>/src/GeneModel.h:66:105: warning: left shift count >= width of type [-Wshift-count-overflow] 66 | return std::hash()(x.first) ^ (std::hash()(x.second)<<32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /<>/src/KmerIndex.h:18, from /<>/src/MinCollector.h:11, from /<>/src/ProcessReads.h:18, from /<>/src/main.cpp:17: /<>/src/KmerHashTable.h: In instantiation of ‘size_t KmerHashTable::rndup(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’: /<>/src/KmerHashTable.h:125:13: required from ‘void KmerHashTable::init_table(size_t) [with T = KmerEntry; Hash = KmerHash; size_t = unsigned int]’ /<>/src/KmerHashTable.h:92:5: required from ‘KmerHashTable::KmerHashTable(const Hash&) [with T = KmerEntry; Hash = KmerHash]’ /<>/src/KmerIndex.h:96:106: required from here /<>/src/KmerHashTable.h:240:12: warning: right shift count >= width of type [-Wshift-count-overflow] 240 | v |= v >> 32; | ~~^~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:72, from /usr/arm-linux-gnueabi/include/c++/10/bits/random.h:34, from /usr/arm-linux-gnueabi/include/c++/10/random:49, from /<>/src/main.cpp:3: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 509 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/arm-linux-gnueabi/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabi/include/c++/10/vector:67, from /usr/arm-linux-gnueabi/include/c++/10/bits/random.h:34, from /usr/arm-linux-gnueabi/include/c++/10/random:49, from /<>/src/main.cpp:3: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In member function ‘void std::discrete_distribution<_IntType>::param_type::_M_initialize() [with _IntType = int]’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’: /usr/arm-linux-gnueabi/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 960 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable kallisto cd /<>/obj-arm-linux-gnueabi/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/kallisto.dir/link.txt --verbose=1 /usr/bin/arm-linux-gnueabi-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/kallisto.dir/main.cpp.o -o kallisto libkallisto_core.a -lpthread -lhts libkallisto_core.a -lz -lrt make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [100%] Built target kallisto make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-arm-linux-gnueabi' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a cd obj-arm-linux-gnueabi && make -j1 install DESTDIR=/<>/kallisto-0.46.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -S/<> -B/<>/obj-arm-linux-gnueabi --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles /<>/obj-arm-linux-gnueabi//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/src /<>/obj-arm-linux-gnueabi/src/CMakeFiles/kallisto_core.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto_core.dir/build.make src/CMakeFiles/kallisto_core.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' make[3]: Nothing to be done for 'src/CMakeFiles/kallisto_core.dir/build'. make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [ 90%] Built target kallisto_core make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/depend make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' cd /<>/obj-arm-linux-gnueabi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/obj-arm-linux-gnueabi /<>/obj-arm-linux-gnueabi/src /<>/obj-arm-linux-gnueabi/src/CMakeFiles/kallisto.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' make -f src/CMakeFiles/kallisto.dir/build.make src/CMakeFiles/kallisto.dir/build make[3]: Entering directory '/<>/obj-arm-linux-gnueabi' make[3]: Nothing to be done for 'src/CMakeFiles/kallisto.dir/build'. make[3]: Leaving directory '/<>/obj-arm-linux-gnueabi' [100%] Built target kallisto make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' /usr/bin/cmake -E cmake_progress_start /<>/obj-arm-linux-gnueabi/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-arm-linux-gnueabi' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-arm-linux-gnueabi' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tmp/usr/bin/kallisto make[1]: Leaving directory '/<>/obj-arm-linux-gnueabi' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/kallisto/usr/bin/kallisto contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'kallisto' in '../kallisto_0.46.2+dfsg-2_armel.deb'. dpkg-deb: building package 'kallisto-dbgsym' in '../kallisto-dbgsym_0.46.2+dfsg-2_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kallisto_0.46.2+dfsg-2_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-10-09T05:24:52Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kallisto_0.46.2+dfsg-2_armel.changes: ------------------------------------- Format: 1.8 Date: Sat, 16 May 2020 04:47:12 +0530 Source: kallisto Binary: kallisto kallisto-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 0.46.2+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pranav Ballaney Description: kallisto - near-optimal RNA-Seq quantification Closes: 960368 Changes: kallisto (0.46.2+dfsg-2) unstable; urgency=medium . * Team upload * Patch to avoid segfault (Closes: #960368) Checksums-Sha1: 0cae3ce37033c373cdb694baf13c8c776fa5350b 3705592 kallisto-dbgsym_0.46.2+dfsg-2_armel.deb 47c722b97721d9bcc9b4cec41e56cb33506251b7 6237 kallisto_0.46.2+dfsg-2_armel.buildinfo 2a7487f9685170e814e8e1031ed0c290b045efc5 207356 kallisto_0.46.2+dfsg-2_armel.deb Checksums-Sha256: 7f749a27c8b8829e3d66e8b1c8c0e22296741de87503a793f63ed60777f0f1c3 3705592 kallisto-dbgsym_0.46.2+dfsg-2_armel.deb af04af39d53e3d4d64a35cb8fe851b055343c3c3782413943ecb8a17922d8a14 6237 kallisto_0.46.2+dfsg-2_armel.buildinfo 3fad63ef4d699d1b517d3f382b9ae85849a0073b8fd79cb2eb65cb9f094bb476 207356 kallisto_0.46.2+dfsg-2_armel.deb Files: 1efef15d6dc5a1f144b6957e4e1c35d8 3705592 debug optional kallisto-dbgsym_0.46.2+dfsg-2_armel.deb 7dadb4293617f9e8394923c333667221 6237 science optional kallisto_0.46.2+dfsg-2_armel.buildinfo 821e7f3978bd3057916920ab8b93cf95 207356 science optional kallisto_0.46.2+dfsg-2_armel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kallisto Binary: kallisto kallisto-dbgsym Architecture: armel Version: 0.46.2+dfsg-2 Checksums-Md5: 1efef15d6dc5a1f144b6957e4e1c35d8 3705592 kallisto-dbgsym_0.46.2+dfsg-2_armel.deb 821e7f3978bd3057916920ab8b93cf95 207356 kallisto_0.46.2+dfsg-2_armel.deb Checksums-Sha1: 0cae3ce37033c373cdb694baf13c8c776fa5350b 3705592 kallisto-dbgsym_0.46.2+dfsg-2_armel.deb 2a7487f9685170e814e8e1031ed0c290b045efc5 207356 kallisto_0.46.2+dfsg-2_armel.deb Checksums-Sha256: 7f749a27c8b8829e3d66e8b1c8c0e22296741de87503a793f63ed60777f0f1c3 3705592 kallisto-dbgsym_0.46.2+dfsg-2_armel.deb 3fad63ef4d699d1b517d3f382b9ae85849a0073b8fd79cb2eb65cb9f094bb476 207356 kallisto_0.46.2+dfsg-2_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 09 Oct 2020 05:24:51 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-7), binutils (= 2.35.1-1), binutils-common (= 2.35.1-1), binutils-x86-64-linux-gnu (= 2.35.1-1), bsdextrautils (= 2.36-3+b1), bsdutils (= 1:2.36-3+b1), build-essential (= 12.8), bzip2 (= 1.0.8-4), cmake (= 3.18.2-1), cmake-data (= 3.18.2-1), coreutils (= 8.32-4+b1), cpp (= 4:10.2.0-1), cpp-10 (= 10.2.0-13), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2.1), debianutils (= 4.11.2), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3), dpkg (= 1.20.5), dpkg-dev (= 1.20.5), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:10.2.0-1), g++-10 (= 10.2.0-13), gcc (= 4:10.2.0-1), gcc-10 (= 10.2.0-13), gcc-10-base (= 10.2.0-13), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hdf5-helpers (= 1.10.6+repack-2), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libaec-dev (= 1.0.4-1), libaec0 (= 1.0.4-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2), libasan6 (= 10.2.0-13), libatomic1 (= 10.2.0-13), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.35.1-1), libblkid1 (= 2.36-3+b1), libbrotli1 (= 1.0.9-2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-3), libc-dev-bin (= 2.31-3), libc6 (= 2.31-3), libc6-dev (= 2.31-3), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-13), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.17-1), libcrypt1 (= 1:4.4.17-1), libctf-nobfd0 (= 2.35.1-1), libctf0 (= 2.35.1-1), libcurl3-gnutls (= 7.72.0-1), libcurl4 (= 7.72.0-1), libcurl4-gnutls-dev (= 7.72.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.254), libdebhelper-perl (= 13.2.1), libdeflate-dev (= 1.6-1), libdeflate0 (= 1.6-1), libdpkg-perl (= 1.20.5), libelf1 (= 0.181-1), libexpat1 (= 2.2.10-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-13), libgcc-s1 (= 10.2.0-13), libgcrypt20 (= 1.8.6-2), libgdbm-compat4 (= 1.18.1-5.1), libgdbm6 (= 1.18.1-5.1), libgfortran5 (= 10.2.0-13), libglib2.0-0 (= 2.66.0-2), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.15-4), libgomp1 (= 10.2.0-13), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhdf5-103-1 (= 1.10.6+repack-2), libhdf5-cpp-103-1 (= 1.10.6+repack-2), libhdf5-dev (= 1.10.6+repack-2), libhdf5-fortran-102 (= 1.10.6+repack-2), libhdf5-hl-100 (= 1.10.6+repack-2), libhdf5-hl-cpp-100 (= 1.10.6+repack-2), libhdf5-hl-fortran-100 (= 1.10.6+repack-2), libhogweed6 (= 3.6-2), libhts-dev (= 1.11-2), libhts3 (= 1.11-2), libicu67 (= 67.1-4), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-13), libjpeg62-turbo (= 1:2.0.5-1.1), libjpeg62-turbo-dev (= 1:2.0.5-1.1), libjsoncpp1 (= 1.7.4-3.1), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.53+dfsg-1), liblsan0 (= 10.2.0-13), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-3+b1), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.2+20200918-1), libncursesw6 (= 6.2+20200918-1), libnettle8 (= 3.6-2), libnghttp2-14 (= 1.41.0-3), libp11-kit0 (= 0.23.21-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libprocps8 (= 2:3.3.16-5), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.2.0-13), librhash0 (= 1.4.0-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.4-1), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.36-3+b1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1g-1), libstdc++-10-dev (= 10.2.0-13), libstdc++6 (= 10.2.0-13), libsub-override-perl (= 0.09-2), libsystemd0 (= 246.6-1), libsz2 (= 1.0.4-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20200918-1), libtool (= 2.4.6-14), libtsan0 (= 10.2.0-13), libubsan1 (= 10.2.0-13), libuchardet0 (= 0.0.7-1), libudev1 (= 246.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-3+b1), libuv1 (= 1.39.0-1), libxml2 (= 2.9.10+dfsg-6), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.10-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20200918-1), ncurses-bin (= 6.2+20200918-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), procps (= 2:3.3.16-5), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-5), tar (= 1.30+dfsg-7), util-linux (= 2.36-3+b1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1589584632" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kallisto-dbgsym_0.46.2+dfsg-2_armel.deb --------------------------------------- new Debian package, version 2.0. size 3705592 bytes: control archive=540 bytes. 387 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: kallisto-dbgsym Source: kallisto Version: 0.46.2+dfsg-2 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 3758 Depends: kallisto (= 0.46.2+dfsg-2) Section: debug Priority: optional Description: debug symbols for kallisto Build-Ids: 8e4b5dba232c7bac43871a7cf0fdaa83929be4b0 drwxr-xr-x root/root 0 2020-05-15 23:17 ./ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/lib/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/lib/debug/.build-id/8e/ -rw-r--r-- root/root 3837392 2020-05-15 23:17 ./usr/lib/debug/.build-id/8e/4b5dba232c7bac43871a7cf0fdaa83929be4b0.debug drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/share/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-05-15 23:17 ./usr/share/doc/kallisto-dbgsym -> kallisto kallisto_0.46.2+dfsg-2_armel.deb -------------------------------- new Debian package, version 2.0. size 207356 bytes: control archive=1116 bytes. 1295 bytes, 23 lines control 264 bytes, 4 lines md5sums Package: kallisto Version: 0.46.2+dfsg-2 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 596 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libhts3 (>= 1.10), libstdc++6 (>= 6), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://pachterlab.github.io/kallisto Description: near-optimal RNA-Seq quantification Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment. On benchmarks with standard RNA-Seq data, kallisto can quantify 30 million human reads in less than 3 minutes on a Mac desktop computer using only the read sequences and a transcriptome index that itself takes less than 10 minutes to build. Pseudoalignment of reads preserves the key information needed for quantification, and kallisto is therefore not only fast, but also as accurate than existing quantification tools. In fact, because the pseudoalignment procedure is robust to errors in the reads, in many benchmarks kallisto significantly outperforms existing tools. drwxr-xr-x root/root 0 2020-05-15 23:17 ./ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/bin/ -rwxr-xr-x root/root 597172 2020-05-15 23:17 ./usr/bin/kallisto drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/share/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-15 23:17 ./usr/share/doc/kallisto/ -rw-r--r-- root/root 323 2020-05-15 23:17 ./usr/share/doc/kallisto/README.test -rw-r--r-- root/root 684 2020-05-15 23:17 ./usr/share/doc/kallisto/changelog.Debian.gz -rw-r--r-- root/root 2910 2020-05-15 23:17 ./usr/share/doc/kallisto/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [543 B] Get:5 copy:/<>/apt_archive ./ Packages [632 B] Fetched 2138 B in 0s (82.0 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:armel t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 7513 kB of archives. After this operation, 21.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7.1 [50.5 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.33.0-1 [790 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1 [13.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b5 [38.4 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.24-1 [16.2 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.24-1 [128 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1 [18.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1 [14.2 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.07-3+b5 [22.9 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1 [11.4 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.110-1 [10.6 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.00-4 [38.3 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1 [12.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b2 [28.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-1 [8888 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1 [21.8 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004002-1 [13.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.6-1 [36.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1 [173 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.114-1 [53.6 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b6 [17.4 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2 [45.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1 [98.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1 [103 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b7 [8696 B] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1 [12.7 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1 [198 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b2 [75.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-1 [39.2 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010006-1 [339 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.21-8 [84.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-1 [83.4 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.97.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7513 kB in 0s (27.3 MB/s) Selecting previously unselected package readline-common. (Reading database ... 24439 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.33.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.33.0-1) ... Selecting previously unselected package gpg. Preparing to unpack .../06-gpg_2.2.20-1_amd64.deb ... Unpacking gpg (2.2.20-1) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../07-libaliased-perl_0.34-1_all.deb ... Unpacking libaliased-perl (0.34-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b3_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b3) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../17-libvariable-magic-perl_0.62-1+b2_amd64.deb ... Unpacking libvariable-magic-perl (0.62-1+b2) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../18-libb-hooks-endofscope-perl_0.24-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.24-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../19-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../20-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libclass-method-modifiers-perl. Preparing to unpack .../21-libclass-method-modifiers-perl_2.13-1_all.deb ... Unpacking libclass-method-modifiers-perl (2.13-1) ... Selecting previously unselected package libclass-xsaccessor-perl. Preparing to unpack .../22-libclass-xsaccessor-perl_1.19-3+b5_amd64.deb ... Unpacking libclass-xsaccessor-perl (1.19-3+b5) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../23-libclone-perl_0.45-1_amd64.deb ... Unpacking libclone-perl (0.45-1) ... Selecting previously unselected package libconfig-tiny-perl. Preparing to unpack .../24-libconfig-tiny-perl_2.24-1_all.deb ... Unpacking libconfig-tiny-perl (2.24-1) ... Selecting previously unselected package libcpanel-json-xs-perl. Preparing to unpack .../25-libcpanel-json-xs-perl_4.24-1_amd64.deb ... Unpacking libcpanel-json-xs-perl (4.24-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../26-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../27-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../28-libiterator-perl_0.03+ds1-1_all.deb ... Unpacking libiterator-perl (0.03+ds1-1) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../29-libiterator-util-perl_0.02+ds1-1_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../30-libexporter-tiny-perl_1.002002-1_all.deb ... Unpacking libexporter-tiny-perl (1.002002-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../31-liblist-moreutils-perl_0.416-1+b5_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b5) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../32-libparams-util-perl_1.07-3+b5_amd64.deb ... Unpacking libparams-util-perl (1.07-3+b5) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../33-libsub-install-perl_0.928-1_all.deb ... Unpacking libsub-install-perl (0.928-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../34-libdata-optlist-perl_0.110-1_all.deb ... Unpacking libdata-optlist-perl (0.110-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../35-libsub-exporter-perl_0.987-1_all.deb ... Unpacking libsub-exporter-perl (0.987-1) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../36-libdata-dpath-perl_0.58-1_all.deb ... Unpacking libdata-dpath-perl (0.58-1) ... Selecting previously unselected package libdata-messagepack-perl. Preparing to unpack .../37-libdata-messagepack-perl_1.00-4_amd64.deb ... Unpacking libdata-messagepack-perl (1.00-4) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../38-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libdata-validate-domain-perl. Preparing to unpack .../39-libdata-validate-domain-perl_0.10-1_all.deb ... Unpacking libdata-validate-domain-perl (0.10-1) ... Selecting previously unselected package libdevel-size-perl. Preparing to unpack .../40-libdevel-size-perl_0.83-1+b1_amd64.deb ... Unpacking libdevel-size-perl (0.83-1+b1) ... Selecting previously unselected package libemail-address-xs-perl. Preparing to unpack .../41-libemail-address-xs-perl_1.04-1+b2_amd64.deb ... Unpacking libemail-address-xs-perl (1.04-1+b2) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../42-libipc-system-simple-perl_1.30-1_all.deb ... Unpacking libipc-system-simple-perl (1.30-1) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../43-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libnumber-compare-perl. Preparing to unpack .../44-libnumber-compare-perl_0.03-1_all.deb ... Unpacking libnumber-compare-perl (0.03-1) ... Selecting previously unselected package libtext-glob-perl. Preparing to unpack .../45-libtext-glob-perl_0.11-1_all.deb ... Unpacking libtext-glob-perl (0.11-1) ... Selecting previously unselected package libfile-find-rule-perl. Preparing to unpack .../46-libfile-find-rule-perl_0.34-1_all.deb ... Unpacking libfile-find-rule-perl (0.34-1) ... Selecting previously unselected package libfont-ttf-perl. Preparing to unpack .../47-libfont-ttf-perl_1.06-1_all.deb ... Unpacking libfont-ttf-perl (1.06-1) ... Selecting previously unselected package libhtml-html5-entities-perl. Preparing to unpack .../48-libhtml-html5-entities-perl_0.004-1_all.deb ... Unpacking libhtml-html5-entities-perl (0.004-1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../49-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../50-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../51-libjson-maybexs-perl_1.004002-1_all.deb ... Unpacking libjson-maybexs-perl (1.004002-1) ... Selecting previously unselected package liblist-compare-perl. Preparing to unpack .../52-liblist-compare-perl_0.55-1_all.deb ... Unpacking liblist-compare-perl (0.55-1) ... Selecting previously unselected package liblist-utilsby-perl. Preparing to unpack .../53-liblist-utilsby-perl_0.11-1_all.deb ... Unpacking liblist-utilsby-perl (0.11-1) ... Selecting previously unselected package liblzo2-2:amd64. Preparing to unpack .../54-liblzo2-2_2.10-2_amd64.deb ... Unpacking liblzo2-2:amd64 (2.10-2) ... Selecting previously unselected package libmarkdown2:amd64. Preparing to unpack .../55-libmarkdown2_2.2.6-1_amd64.deb ... Unpacking libmarkdown2:amd64 (2.2.6-1) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../56-librole-tiny-perl_2.001004-1_all.deb ... Unpacking librole-tiny-perl (2.001004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../57-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../58-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../59-libmoo-perl_2.004000-1_all.deb ... Unpacking libmoo-perl (2.004000-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../60-libmoox-aliases-perl_0.001006-1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../61-libmouse-perl_2.5.10-1_amd64.deb ... Unpacking libmouse-perl (2.5.10-1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../62-libpackage-stash-perl_0.38-1_all.deb ... Unpacking libpackage-stash-perl (0.38-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../63-libsub-identify-perl_0.14-1+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b2) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../64-libsub-name-perl_0.26-1_amd64.deb ... Unpacking libsub-name-perl (0.26-1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../65-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../66-libpath-tiny-perl_0.114-1_all.deb ... Unpacking libpath-tiny-perl (0.114-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../67-libperlio-gzip-perl_0.19-1+b6_amd64.deb ... Unpacking libperlio-gzip-perl (0.19-1+b6) ... Selecting previously unselected package libproc-processtable-perl. Preparing to unpack .../68-libproc-processtable-perl_0.59-2_amd64.deb ... Unpacking libproc-processtable-perl (0.59-2) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../69-libsereal-decoder-perl_4.018+ds-1_amd64.deb ... Unpacking libsereal-decoder-perl (4.018+ds-1) ... Selecting previously unselected package libsereal-encoder-perl. Preparing to unpack .../70-libsereal-encoder-perl_4.018+ds-1_amd64.deb ... Unpacking libsereal-encoder-perl (4.018+ds-1) ... Selecting previously unselected package libtext-levenshteinxs-perl. Preparing to unpack .../71-libtext-levenshteinxs-perl_0.03-4+b7_amd64.deb ... Unpacking libtext-levenshteinxs-perl (0.03-4+b7) ... Selecting previously unselected package libtext-markdown-discount-perl:amd64. Preparing to unpack .../72-libtext-markdown-discount-perl_0.12-1_amd64.deb ... Unpacking libtext-markdown-discount-perl:amd64 (0.12-1) ... Selecting previously unselected package libtext-xslate-perl. Preparing to unpack .../73-libtext-xslate-perl_3.5.8-1_amd64.deb ... Unpacking libtext-xslate-perl (3.5.8-1) ... Selecting previously unselected package libtime-duration-perl. Preparing to unpack .../74-libtime-duration-perl_1.21-1_all.deb ... Unpacking libtime-duration-perl (1.21-1) ... Selecting previously unselected package libtime-moment-perl. Preparing to unpack .../75-libtime-moment-perl_0.44-1+b2_amd64.deb ... Unpacking libtime-moment-perl (0.44-1+b2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../76-libtimedate-perl_2.3300-1_all.deb ... Unpacking libtimedate-perl (2.3300-1) ... Selecting previously unselected package libtype-tiny-perl. Preparing to unpack .../77-libtype-tiny-perl_1.010006-1_all.deb ... Unpacking libtype-tiny-perl (1.010006-1) ... Selecting previously unselected package libunicode-utf8-perl. Preparing to unpack .../78-libunicode-utf8-perl_0.62-1+b1_amd64.deb ... Unpacking libunicode-utf8-perl (0.62-1+b1) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../79-liburi-perl_1.76-2_all.deb ... Unpacking liburi-perl (1.76-2) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../80-libyaml-0-2_0.2.2-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../81-libyaml-libyaml-perl_0.82+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.82+repack-1) ... Selecting previously unselected package lzip. Preparing to unpack .../82-lzip_1.21-8_amd64.deb ... Unpacking lzip (1.21-8) ... Selecting previously unselected package lzop. Preparing to unpack .../83-lzop_1.04-1_amd64.deb ... Unpacking lzop (1.04-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../84-patchutils_0.4.2-1_amd64.deb ... Unpacking patchutils (0.4.2-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../85-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package unzip. Preparing to unpack .../86-unzip_6.0-25_amd64.deb ... Unpacking unzip (6.0-25) ... Selecting previously unselected package lintian. Preparing to unpack .../87-lintian_2.97.0_all.deb ... Unpacking lintian (2.97.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armel. Preparing to unpack .../88-sbuild-build-depends-lintian-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.36+b3) ... Setting up libunicode-utf8-perl (0.62-1+b1) ... Setting up libmouse-perl (2.5.10-1) ... Setting up libdata-messagepack-perl (1.00-4) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libcpanel-json-xs-perl (4.24-1) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up unzip (6.0-25) ... Setting up libsqlite3-0:amd64 (3.33.0-1) ... Setting up libyaml-libyaml-perl (0.82+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b2) ... Setting up libassuan0:amd64 (2.5.3-7.1) ... Setting up libconfig-tiny-perl (2.24-1) ... Setting up libsereal-encoder-perl (4.018+ds-1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libsub-install-perl (0.928-1) ... Setting up libnumber-compare-perl (0.03-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004002-1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up lzip (1.21-8) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libparams-util-perl (1.07-3+b5) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libdata-validate-domain-perl (0.10-1) ... Setting up libproc-processtable-perl (0.59-2) ... Setting up libpath-tiny-perl (0.114-1) ... Setting up lzop (1.04-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b7) ... Setting up libperlio-gzip-perl (0.19-1+b6) ... Setting up readline-common (8.0-4) ... Setting up libhtml-html5-entities-perl (0.004-1) ... Setting up libsereal-decoder-perl (4.018+ds-1) ... Setting up libmarkdown2:amd64 (2.2.6-1) ... Setting up liburi-perl (1.76-2) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010006-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libdata-optlist-perl (0.110-1) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1) ... Setting up libiterator-util-perl (0.02+ds1-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.97.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-3) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 89524 Build-Time: 76 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 28 Job: kallisto_0.46.2+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: kallisto Package-Time: 114 Source-Version: 0.46.2+dfsg-2 Space: 89524 Status: successful Version: 0.46.2+dfsg-2 -------------------------------------------------------------------------------- Finished at 2020-10-09T05:24:52Z Build needed 00:01:54, 89524k disk space