sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kma 1.2.22-1 (ppc64el) Wed, 06 May 2020 06:22:37 +0000 | +==============================================================================+ Package: kma Version: 1.2.22-1 Source Version: 1.2.22-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-460c18ef-18f6-4bd9-8385-baba5d424a9e' with '<>' I: NOTICE: Log filtering will replace 'build/kma-fygdOE/resolver-Oup1gk' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-05-0801.56.pdiff [5813 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-05-1407.01.pdiff [16.7 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-05-2009.33.pdiff [14.0 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-06-0207.26.pdiff [16.6 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-05-0801.56.pdiff [3086 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-05-1407.01.pdiff [27.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-05-2009.33.pdiff [26.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main Sources 2020-05-06-0207.26.pdiff [16.6 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-06-0207.26.pdiff [5287 B] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-05-06-0207.26.pdiff [5287 B] Get:12 http://debian.oregonstate.edu/debian unstable/main ppc64el Packages [8018 kB] Fetched 8335 kB in 1s (5570 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libc-bin libc-dev-bin libc6 make 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4249 kB of archives. After this operation, 1024 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libc6 amd64 2.30-7 [2823 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libc-bin amd64 2.30-7 [805 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libc-dev-bin amd64 2.30-7 [280 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 make amd64 4.2.1-2 [340 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4249 kB in 0s (94.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12638 files and directories currently installed.) Preparing to unpack .../libc6_2.30-7_amd64.deb ... Unpacking libc6:amd64 (2.30-7) over (2.30-5) ... Setting up libc6:amd64 (2.30-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12638 files and directories currently installed.) Preparing to unpack .../libc-bin_2.30-7_amd64.deb ... Unpacking libc-bin (2.30-7) over (2.30-5) ... Setting up libc-bin (2.30-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12638 files and directories currently installed.) Preparing to unpack .../libc-dev-bin_2.30-7_amd64.deb ... Unpacking libc-dev-bin (2.30-7) over (2.30-5) ... Preparing to unpack .../make_4.2.1-2_amd64.deb ... Unpacking make (4.2.1-2) over (4.2.1-1.3) ... Setting up make (4.2.1-2) ... Setting up libc-dev-bin (2.30-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kma' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kam.git Please use: git clone https://salsa.debian.org/med-team/kam.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 731 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kma 1.2.22-1 (dsc) [1918 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kma 1.2.22-1 (tar) [724 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kma 1.2.22-1 (diff) [4680 B] Fetched 731 kB in 0s (13.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kma-fygdOE/kma-1.2.22' with '<>' I: NOTICE: Log filtering will replace 'build/kma-fygdOE' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 12), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [409 B] Get:5 copy:/<>/apt_archive ./ Packages [501 B] Fetched 1867 B in 0s (71.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdmainutils build-essential cpp-9-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-9-base:ppc64el gcc-9-cross-base gcc-9-powerpc64le-linux-gnu gcc-9-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan5-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbsd0 libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:ppc64el libgcc-9-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libglib2.0-0 libgomp1:ppc64el libgomp1-ppc64el-cross libicu63 libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsigsegv2 libstdc++-9-dev libstdc++-9-dev:ppc64el libstdc++-9-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el glibc-doc manpages-dev:ppc64el libstdc++-9-doc libstdc++-9-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:ppc64el libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdmainutils build-essential cpp-9-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-9-base:ppc64el gcc-9-cross-base gcc-9-powerpc64le-linux-gnu gcc-9-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan5-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbsd0 libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:ppc64el libgcc-9-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libglib2.0-0 libgomp1:ppc64el libgomp1-ppc64el-cross libicu63 libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsigsegv2 libstdc++-9-dev libstdc++-9-dev:ppc64el libstdc++-9-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. Need to get 82.0 MB of archives. After this operation, 362 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-10-base ppc64el 10-20200502-1 [197 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-9-base ppc64el 9.3.0-11 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.34-6 [2253 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-7 [2634 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-11 [1701 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-11 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-powerpc64le-linux-gnu-base amd64 9.3.0-8cross1 [196 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-powerpc64le-linux-gnu amd64 9.3.0-8cross1 [6744 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.3.0-8cross1 [192 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10-20200418-1cross1 [192 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-ppc64el-cross all 2.30-2cross1 [1524 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 10-20200418-1cross1 [30.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-ppc64el-cross all 10-20200418-1cross1 [106 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-ppc64el-cross all 10-20200418-1cross1 [28.4 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-ppc64el-cross all 10-20200418-1cross1 [9700 B] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-ppc64el-cross all 9.3.0-8cross1 [401 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-ppc64el-cross all 10-20200418-1cross1 [155 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-ppc64el-cross all 10-20200418-1cross1 [317 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-ppc64el-cross all 10-20200418-1cross1 [504 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-ppc64el-cross all 10-20200418-1cross1 [147 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0-ppc64el-cross all 10-20200418-1cross1 [152 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-ppc64el-cross all 9.3.0-8cross1 [1261 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-powerpc64le-linux-gnu amd64 9.3.0-8cross1 [7130 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [1480 B] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 5.4.19-1cross1 [1167 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.30-2cross1 [2651 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-ppc64el-cross all 9.3.0-8cross1 [1729 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-powerpc64le-linux-gnu amd64 9.3.0-8cross1 [7335 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [1188 B] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5 [709 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.8 [6652 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13 [184 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.0-1 [24.2 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.0-1 [14.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.2-1 [1343 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13 [1002 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-s1 ppc64el 10-20200502-1 [30.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.16-1 [97.9 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6 ppc64el 2.30-7 [2817 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main ppc64el libasan5 ppc64el 9.3.0-11 [408 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main ppc64el libatomic1 ppc64el 10-20200502-1 [9904 B] Get:91 http://debian.oregonstate.edu/debian unstable/main ppc64el linux-libc-dev ppc64el 5.6.7-1 [1093 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.16-1 [121 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6-dev ppc64el 2.30-7 [2658 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main ppc64el libgomp1 ppc64el 10-20200502-1 [107 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main ppc64el libitm1 ppc64el 10-20200502-1 [28.8 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main ppc64el liblsan0 ppc64el 10-20200502-1 [155 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main ppc64el libtsan0 ppc64el 10-20200502-1 [325 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++6 ppc64el 10-20200502-1 [545 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main ppc64el libubsan1 ppc64el 10-20200502-1 [147 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main ppc64el libquadmath0 ppc64el 10-20200502-1 [153 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-9-dev ppc64el 9.3.0-11 [1258 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++-9-dev ppc64el 9.3.0-11 [1751 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-2 [94.7 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2 [195 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 82.0 MB in 1s (112 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12638 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... 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Preparing to unpack .../094-liblsan0_10-20200502-1_ppc64el.deb ... Unpacking liblsan0:ppc64el (10-20200502-1) ... Selecting previously unselected package libtsan0:ppc64el. Preparing to unpack .../095-libtsan0_10-20200502-1_ppc64el.deb ... Unpacking libtsan0:ppc64el (10-20200502-1) ... Selecting previously unselected package libstdc++6:ppc64el. Preparing to unpack .../096-libstdc++6_10-20200502-1_ppc64el.deb ... Unpacking libstdc++6:ppc64el (10-20200502-1) ... Selecting previously unselected package libubsan1:ppc64el. Preparing to unpack .../097-libubsan1_10-20200502-1_ppc64el.deb ... Unpacking libubsan1:ppc64el (10-20200502-1) ... Selecting previously unselected package libquadmath0:ppc64el. Preparing to unpack .../098-libquadmath0_10-20200502-1_ppc64el.deb ... Unpacking libquadmath0:ppc64el (10-20200502-1) ... Selecting previously unselected package libgcc-9-dev:ppc64el. Preparing to unpack .../099-libgcc-9-dev_9.3.0-11_ppc64el.deb ... Unpacking libgcc-9-dev:ppc64el (9.3.0-11) ... Selecting previously unselected package libstdc++-9-dev:ppc64el. Preparing to unpack .../100-libstdc++-9-dev_9.3.0-11_ppc64el.deb ... Unpacking libstdc++-9-dev:ppc64el (9.3.0-11) ... Selecting previously unselected package zlib1g:ppc64el. Preparing to unpack .../101-zlib1g_1%3a1.2.11.dfsg-2_ppc64el.deb ... Unpacking zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Selecting previously unselected package zlib1g-dev:ppc64el. Preparing to unpack .../102-zlib1g-dev_1%3a1.2.11.dfsg-2_ppc64el.deb ... Unpacking zlib1g-dev:ppc64el (1:1.2.11.dfsg-2) ... Selecting previously unselected package sbuild-build-depends-main-dummy:ppc64el. Preparing to unpack .../103-sbuild-build-depends-main-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000002-1) ... Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.64.2-1) ... No schema files found: doing nothing. Setting up libc6-ppc64el-cross (2.30-2cross1) ... Setting up libdebhelper-perl (13) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:ppc64el (5.6.7-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-powerpc64le-linux-gnu-base:amd64 (9.3.0-8cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-9-powerpc64le-linux-gnu (9.3.0-8cross1) ... Setting up gcc-10-base:ppc64el (10-20200502-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up gcc-9-cross-base (9.3.0-8cross1) ... Setting up gcc-10-cross-base (10-20200418-1cross1) ... Setting up libitm1-ppc64el-cross (10-20200418-1cross1) ... Setting up libatomic1-ppc64el-cross (10-20200418-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up linux-libc-dev-ppc64el-cross (5.4.19-1cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-7) ... Setting up libgcc-s1-ppc64el-cross (10-20200418-1cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.34-6) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up cpp-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up gcc-9-base:ppc64el (9.3.0-11) ... Setting up libfile-stripnondeterminism-perl (1.8.0-1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-11) ... Setting up libc6-dev-ppc64el-cross (2.30-2cross1) ... Setting up libtool (2.4.6-14) ... Setting up libquadmath0-ppc64el-cross (10-20200418-1cross1) ... Setting up libasan5-ppc64el-cross (9.3.0-8cross1) ... Setting up m4 (1.4.18-4) ... Setting up libgomp1-ppc64el-cross (10-20200418-1cross1) ... Setting up liblsan0-ppc64el-cross (10-20200418-1cross1) ... Setting up libtsan0-ppc64el-cross (10-20200418-1cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-11) ... Setting up libstdc++6-ppc64el-cross (10-20200418-1cross1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.8.0-1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-ppc64el-cross (10-20200418-1cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-ppc64el-cross (9.3.0-8cross1) ... Setting up gcc-9-powerpc64le-linux-gnu (9.3.0-8cross1) ... Setting up po-debconf (1.0.21) ... Setting up libstdc++-9-dev-ppc64el-cross (9.3.0-8cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-9-powerpc64le-linux-gnu (9.3.0-8cross1) ... Setting up g++-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-ppc64el (12.8) ... Setting up libcrypt1:ppc64el (1:4.4.16-1) ... Setting up libgcc-s1:ppc64el (10-20200502-1) ... Setting up libc6:ppc64el (2.30-7) ... Setting up libcrypt-dev:ppc64el (1:4.4.16-1) ... Setting up libc6-dev:ppc64el (2.30-7) ... Setting up libstdc++6:ppc64el (10-20200502-1) ... Setting up liblsan0:ppc64el (10-20200502-1) ... Setting up libitm1:ppc64el (10-20200502-1) ... Setting up libtsan0:ppc64el (10-20200502-1) ... Setting up debhelper (13) ... Setting up zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Setting up libgomp1:ppc64el (10-20200502-1) ... Setting up dh-autoreconf (19) ... Setting up libasan5:ppc64el (9.3.0-11) ... Setting up libquadmath0:ppc64el (10-20200502-1) ... Setting up libatomic1:ppc64el (10-20200502-1) ... Setting up libubsan1:ppc64el (10-20200502-1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2) ... Setting up libgcc-9-dev:ppc64el (9.3.0-11) ... Setting up libstdc++-9-dev:ppc64el (9.3.0-11) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.30-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-6 dpkg-dev_1.19.7 g++-9_9.3.0-11 gcc-9_9.3.0-11 libc6-dev_2.30-7 libstdc++-9-dev_9.3.0-11 libstdc++-9-dev-ppc64el-cross_9.3.0-8cross1 libstdc++6_10-20200502-1 libstdc++6-ppc64el-cross_10-20200418-1cross1 linux-libc-dev_5.6.7-1 Package versions: adduser_3.118 apt_2.1.0 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-6 binutils-common_2.34-6 binutils-powerpc64le-linux-gnu_2.34-6 binutils-x86-64-linux-gnu_2.34-6 bsdmainutils_11.1.2+b1 bsdutils_1:2.35.1-1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-3 cpp-9_9.3.0-11 cpp-9-powerpc64le-linux-gnu_9.3.0-8cross1 cpp-powerpc64le-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-ppc64el_12.8 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-11 g++-9-powerpc64le-linux-gnu_9.3.0-8cross1 g++-powerpc64le-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200502-1 gcc-10-cross-base_10-20200418-1cross1 gcc-8-base_8.4.0-3 gcc-9_9.3.0-11 gcc-9-base_9.3.0-11 gcc-9-cross-base_9.3.0-8cross1 gcc-9-powerpc64le-linux-gnu_9.3.0-8cross1 gcc-9-powerpc64le-linux-gnu-base_9.3.0-8cross1 gcc-powerpc64le-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.0 libarchive-zip-perl_1.68-1 libasan5_9.3.0-11 libasan5-ppc64el-cross_9.3.0-8cross1 libatomic1_10-20200502-1 libatomic1-ppc64el-cross_10-20200418-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-6 libblkid1_2.35.1-1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-7 libc-dev-bin_2.30-7 libc6_2.30-7 libc6-dev_2.30-7 libc6-dev-ppc64el-cross_2.30-2cross1 libc6-ppc64el-cross_2.30-2cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200502-1 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-6 libctf0_2.34-6 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_13 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-1 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.0-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-11 libgcc-9-dev-ppc64el-cross_9.3.0-8cross1 libgcc-s1_10-20200502-1 libgcc-s1-ppc64el-cross_10-20200418-1cross1 libgcc1_1:10-20200502-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10-20200502-1 libgomp1-ppc64el-cross_10-20200418-1cross1 libgpg-error0_1.37-1 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200502-1 libitm1-ppc64el-cross_10-20200418-1cross1 liblocale-gettext-perl_1.07-4 liblsan0_10-20200502-1 liblsan0-ppc64el-cross_10-20200418-1cross1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.35.1-1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-3 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libquadmath0_10-20200502-1 libquadmath0-ppc64el-cross_10-20200418-1cross1 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.1-1 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-11 libstdc++-9-dev-ppc64el-cross_9.3.0-8cross1 libstdc++6_10-20200502-1 libstdc++6-ppc64el-cross_10-20200418-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.5-2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200502-1 libtsan0-ppc64el-cross_10-20200418-1cross1 libubsan1_10-20200502-1 libubsan1-ppc64el-cross_10-20200418-1cross1 libuchardet0_0.0.6-3 libudev1_245.5-2 libunistring2_0.9.10-2 libuuid1_2.35.1-1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.6.7-1 linux-libc-dev-ppc64el-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.35.1-1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-10 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0038+nmu1 util-linux_2.35.1-1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: kma Binary: kma Architecture: any Version: 1.2.22-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://bitbucket.org/genomicepidemiology/kma Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/kma Vcs-Git: https://salsa.debian.org/med-team/kam.git Build-Depends: debhelper-compat (= 12), zlib1g-dev Package-List: kma deb science optional arch=any Checksums-Sha1: d67e8749fe5db374bec4f775fd8ee410924c4d8e 724212 kma_1.2.22.orig.tar.bz2 992f457c7a730f9e0822572e4a65cd276b75f110 4680 kma_1.2.22-1.debian.tar.xz Checksums-Sha256: 776e17a870c6b1aa0d89352f81b0af4cf00627111bf31ebaa7a97a5066190397 724212 kma_1.2.22.orig.tar.bz2 dfcba432587fe4a5a998c806724ecde20489ffdaffc17cf043f2fec72e474850 4680 kma_1.2.22-1.debian.tar.xz Files: 949777048c88bf982cac257c3207b3a3 724212 kma_1.2.22.orig.tar.bz2 3cd6196686659ce6abc4dc45572a637b 4680 kma_1.2.22-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEhMGXeonn7+0+XKYuL9i+2sAg7tEFAl6kyOMTHG1vZWxsZXJA ZGViaWFuLm9yZwAKCRAv2L7awCDu0c87EAC5UBHacaQ5i87lLmrvX28png3Y9KX7 uGst6ELQ+L+ZHRIvnHIq9s7wk5QxXAoD0WSxESdkYHsFq4C6U0dTv9VSM1MuvqEP pReOO4V23kaBVIrngOJMUrt2gc+X2KkLydGWiAHnIbHNu6bCunBXDKPOuzocI84p XRrpY2C1zOA+H9u0197ViOjDY3fj/vl6r6MKiVvnc10WoRN+cN5IM7dzVBrLiK/K NwrsSAth+QufWQl6AbVkLA9/piIKWAp0w9jUZU2sK6rSQI3iBuQawQj3Ay1C9QCh J8P45/ProKnqKyJB0oBM7Pvw6bhNwmVlCTsqCJi5pcHhgOzc/o8kSY4YQY0l+fTr PkQcDaXmKTjKT+SjW784BnVDsqjRLWW5i78woBwItqiC+zA/aA2X9MhzdEMHOTT1 OR6On+cxdcaMPXd+Fbla3H+WNmvhiuYaILiqhXcHFQQBTyMoUccagwXJdvA8JUsD BRPbiETikUQuMFE+i/aOvo87+PI9UFsSv/lhlp/12Mg+XePlHiykUDT79ckinkf0 GmZisMkDLvFXZbeSTy/Fu8Id/6Zn+J539nTsYSd8k2F/DahMA43Nw4YaRwOGGPo/ yK50te6VNdQhkCbrOjd5LhsmGpy6ZXhVv4s57cdgAP+uupEC7+C+jzvQohKJRedL DGXGOaIlISO/rQ== =IwKS -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sat Apr 25 23:33:55 2020 UTC gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: issuer "moeller@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kma_1.2.22-1.dsc dpkg-source: info: extracting kma in /<> dpkg-source: info: unpacking kma_1.2.22.orig.tar.bz2 dpkg-source: info: unpacking kma_1.2.22-1.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-460c18ef-18f6-4bd9-8385-baba5d424a9e SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kma dpkg-buildpackage: info: source version 1.2.22-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f align.o alnfrags.o ankers.o assembly.o chain.o compdna.o compkmers.o compress.o decon.o ef.o filebuff.o frags.o hashmap.o hashmapindex.o hashmapkma.o hashmapkmers.o hashtable.o index.o kma.o kmapipe.o kmeranker.o kmers.o kmmap.o loadupdate.o makeindex.o mt1.o nw.o pherror.o printconsensus.o qseqs.o qualcheck.o runinput.o runkma.o sam.o savekmers.o seq2fasta.o seqmenttree.o seqparse.o shm.o sparse.o spltdb.o stdnuc.o stdstat.o tmp.o update.o updateindex.o updatescores.o valueshash.o vcf.o kma kma_index kma_shm kma_update libkma.a make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=powerpc64le-linux-gnu-pkg-config CXX=powerpc64le-linux-gnu-g\+\+ CC=powerpc64le-linux-gnu-gcc make[1]: Entering directory '/<>' powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o align.o align.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o alnfrags.o alnfrags.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ankers.o ankers.c ankers.c: In function ‘get_ankers’: ankers.c:202:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 202 | fread(qseq->seq, sizeof(long unsigned), qseq->complen, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ankers.c:203:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 203 | fread(qseq->N + 1, sizeof(int), qseq->N[0], inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ankers.c:204:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 204 | fread(out_Tem + 1, sizeof(int), *out_Tem, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ankers.c:205:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 205 | fread(header->seq, 1, header->len, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o assembly.o assembly.c assembly.c: In function ‘assemble_KMA_threaded’: assembly.c:389:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 389 | fread(buffer, sizeof(int), 8, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:416:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 416 | fread(qseq->seq, 1, qseq->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:417:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 417 | fread(header->seq, 1, header->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c: In function ‘assemble_KMA_dense_threaded’: assembly.c:875:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 875 | fread(buffer, sizeof(int), 8, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:902:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 902 | fread(qseq->seq, 1, qseq->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:903:6: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 903 | fread(header->seq, 1, header->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c: In function ‘skip_assemble_KMA’: assembly.c:1176:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1176 | fread(buffer, sizeof(int), 8, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:1196:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1196 | fread(qseq->seq, 1, qseq->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ assembly.c:1197:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1197 | fread(header->seq, 1, header->len, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o chain.o chain.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compdna.o compdna.c compdna.c: In function ‘getComp’: compdna.c:289:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 289 | fread(&compressor->seqlen, sizeof(int), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compkmers.o compkmers.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compress.o compress.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o decon.o decon.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ef.o ef.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o filebuff.o filebuff.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o frags.o frags.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmap.o hashmap.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapindex.o hashmapindex.c hashmapindex.c: In function ‘hashMap_index_load’: hashmapindex.c:267:2: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 267 | read(seq, src->seq, ((src->len >> 5) + 1) * sizeof(long unsigned)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ hashmapindex.c:268:2: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 268 | read(index, src->index, src->size * sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ hashmapindex.c: In function ‘hashMap_index_build’: hashmapindex.c:293:2: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 293 | read(seq, src->seq, ((src->len >> 5) + 1) * sizeof(long unsigned)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ hashmapindex.c: In function ‘alignLoad_shm_initial’: hashmapindex.c:374:2: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 374 | read(index_in, &kmersize, sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapkma.o hashmapkma.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapkmers.o hashmapkmers.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashtable.o hashtable.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o index.o index.c index.c: In function ‘index_main’: index.c:344:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 344 | fread(inputfiles[filecount - 1], 1, size - 1, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ index.c:397:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 397 | fread(deconfiles[deconcount - 1], 1, size - 1, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kma.o kma.c kma.c: In function ‘kma_main’: kma.c:1092:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1092 | fread(&qseq.len, sizeof(int), 1, templatefile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmapipe.o kmapipe.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmeranker.o kmeranker.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmers.o kmers.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmmap.o kmmap.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadupdate.o loadupdate.c loadupdate.c: In function ‘load_DBs’: loadupdate.c:178:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 178 | fread(&DB_size, sizeof(unsigned), 1, infile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ loadupdate.c:183:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 183 | fread(*template_lengths, sizeof(unsigned), DB_size, infile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ loadupdate.c:184:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 184 | fread(*template_slengths, sizeof(unsigned), DB_size, infile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ loadupdate.c:185:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 185 | fread(*template_ulengths, sizeof(unsigned), DB_size, infile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ loadupdate.c:193:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 193 | fread(*template_lengths, sizeof(unsigned), DB_size, infile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o makeindex.o makeindex.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mt1.o mt1.c mt1.c: In function ‘runKMA_Mt1’: mt1.c:166:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 166 | fread(&DB_size, sizeof(int), 1, DB_file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o nw.o nw.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pherror.o pherror.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o printconsensus.o printconsensus.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qseqs.o qseqs.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qualcheck.o qualcheck.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o runinput.o runinput.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o runkma.o runkma.c runkma.c: In function ‘runKMA’: runkma.c:216:3: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 216 | read(index_in_no, &kmersize, sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:576:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 576 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:577:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 577 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:578:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 578 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:579:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 579 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:580:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 580 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:675:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 675 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:679:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 679 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:680:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 680 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:724:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 724 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:777:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 777 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:820:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 820 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:844:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 844 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:860:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 860 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:861:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 861 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:862:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 862 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:863:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 863 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:864:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 864 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1010:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1010 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1014:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1014 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1015:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1015 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c: In function ‘runKMA_MEM’: runkma.c:1359:3: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 1359 | read(index_in_no, &kmersize, sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1604:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1604 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1605:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1605 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1606:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1606 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1607:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1607 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1608:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1608 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1703:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1703 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1707:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1707 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1708:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1708 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1752:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1752 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1805:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1805 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1848:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1848 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1872:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1872 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1888:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1888 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1889:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1889 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1890:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1890 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1891:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1891 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:1892:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1892 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:2035:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 2035 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:2039:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 2039 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ runkma.c:2040:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 2040 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o savekmers.o savekmers.c savekmers.c: In function ‘loadFsa’: savekmers.c:83:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 83 | fread(qseq->seq, sizeof(long unsigned), qseq->complen, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ savekmers.c:84:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 84 | fread(qseq->N + 1, sizeof(int), qseq->N[0], inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ savekmers.c:85:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 85 | fread(header->seq, 1, header->len, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seq2fasta.o seq2fasta.c seq2fasta.c: In function ‘printFastas’: seq2fasta.c:84:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 84 | fread(compseq, sizeof(long unsigned), (template_lengths[i] >> 5) + 1, seqfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seq2fasta.c: In function ‘printFastaList’: seq2fasta.c:146:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 146 | fread(compseq, sizeof(long unsigned), (template_lengths[i] >> 5) + 1, seqfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seqmenttree.o seqmenttree.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seqparse.o seqparse.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o shm.o shm.c shm.c: In function ‘hashMapKMA_setupSHM’: shm.c:95:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 95 | fread(dest->exist, 1, size, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c:115:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 115 | fread(dest->values, 1, size, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c:138:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 138 | fread(dest->key_index, 1, size, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c:158:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 158 | fread(dest->value_index, 1, size, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c: In function ‘length_setupSHM’: shm.c:263:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 263 | fread(template_lengths, sizeof(unsigned), size / sizeof(unsigned), file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c: In function ‘index_setupSHM’: shm.c:305:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 305 | fread(index, sizeof(int), size / sizeof(int), file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c: In function ‘seq_setupSHM’: shm.c:346:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 346 | fread(seq, sizeof(long unsigned), size / sizeof(long unsigned), file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ shm.c: In function ‘name_setupSHM’: shm.c:388:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 388 | fread(template_names, 1, size, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sparse.o sparse.c sparse.c: In function ‘load_DBs_Sparse’: sparse.c:156:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 156 | fread(*template_lengths, sizeof(int), DB_size, DB_file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sparse.c:157:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 157 | fread(*template_ulengths, sizeof(int), DB_size, DB_file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sparse.c:197:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 197 | fread(template_names[0], 1, file_size, DB_file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o spltdb.o spltdb.c spltdb.c: In function ‘runKMA_spltDB’: spltdb.c:460:3: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 460 | fread(template_lengths + dbBiases[i], sizeof(int), bias, inputfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:849:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 849 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:850:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 850 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:851:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 851 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:852:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 852 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:853:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 853 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:948:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 948 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:952:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 952 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:953:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 953 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:997:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 997 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1050:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1050 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1093:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1093 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1117:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1117 | fread(stats, sizeof(int), 2, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1133:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1133 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1134:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1134 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1135:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1135 | fread(best_start_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1136:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1136 | fread(best_end_pos, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1137:4: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1137 | fread(bestTemplates, sizeof(int), bestHits, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1281:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1281 | fread(stats, sizeof(int), 3, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1285:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1285 | fread(qseq->seq, 1, qseq->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1286:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 1286 | fread(header->seq, 1, header->len, frag_in_raw); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1525:3: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 1525 | read(index_in_no, &kmersize, sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spltdb.c:1573:5: warning: ignoring return value of ‘read’, declared with attribute warn_unused_result [-Wunused-result] 1573 | read(index_in_no, &kmersize, sizeof(int)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdnuc.o stdnuc.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdstat.o stdstat.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tmp.o tmp.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o update.o update.c update.c: In function ‘convertLength_014to015’: update.c:40:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 40 | fread(&size, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c: In function ‘hashMapKMA_014to015’: update.c:88:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 88 | fread(&DB_size, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:89:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 89 | fread(&dest->kmersize, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:90:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 90 | fread(&dest->prefix_len, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:91:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 91 | fread(&dest->prefix, sizeof(long unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:92:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 92 | fread(&dest->size, sizeof(long unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:100:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 100 | fread(&tmp, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:102:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 102 | fread(&seqsize, sizeof(unsigned), 1, file); //seq size | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:103:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 103 | fread(&tmp, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ update.c:105:2: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] 105 | fread(&tmp, sizeof(unsigned), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o updateindex.o updateindex.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o updatescores.o updatescores.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o valueshash.o valueshash.c powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcf.o vcf.c ar -csru libkma.a align.o alnfrags.o ankers.o assembly.o chain.o compdna.o compkmers.o compress.o decon.o ef.o filebuff.o frags.o hashmap.o hashmapindex.o hashmapkma.o hashmapkmers.o hashtable.o index.o kma.o kmapipe.o kmeranker.o kmers.o kmmap.o loadupdate.o makeindex.o mt1.o nw.o pherror.o printconsensus.o qseqs.o qualcheck.o runinput.o runkma.o sam.o savekmers.o seq2fasta.o seqmenttree.o seqparse.o shm.o sparse.o spltdb.o stdnuc.o stdstat.o tmp.o update.o updateindex.o updatescores.o valueshash.o vcf.o ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -o kma main.c libkma.a -lm -lpthread -lz -Wl,-z,relro -Wl,-z,now powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -o kma_index kma_index.c libkma.a -lm -lz -Wl,-z,relro -Wl,-z,now powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -o kma_shm kma_shm.c libkma.a -Wl,-z,relro -Wl,-z,now powerpc64le-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -o kma_update kma_update.c libkma.a -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'kma' in '../kma_1.2.22-1_ppc64el.deb'. dpkg-deb: building package 'kma-dbgsym' in '../kma-dbgsym_1.2.22-1_ppc64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kma_1.2.22-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-05-06T06:23:28Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kma_1.2.22-1_ppc64el.changes: ----------------------------- Format: 1.8 Date: Sun, 26 Apr 2020 01:31:11 +0200 Source: kma Binary: kma kma-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 1.2.22-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steffen Moeller Description: kma - mapping genomic sequences to raw reads directly against redundant Changes: kma (1.2.22-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * d/u/metadata: yamllint clean Checksums-Sha1: ed52bd22b04c2c5df9c0c12a736ed08418769cf0 526120 kma-dbgsym_1.2.22-1_ppc64el.deb 310117e74ea4e8aa9afbf36fa1721002152659d7 4675 kma_1.2.22-1_ppc64el.buildinfo cb9b7887dc1e25533e98c2430a741b38526b0ff3 175256 kma_1.2.22-1_ppc64el.deb Checksums-Sha256: e02511c128b4002d54602169ddde8d26faf6b79c92c8d7795865c59a781f587d 526120 kma-dbgsym_1.2.22-1_ppc64el.deb 3d5de5efd97a21eed3bda79778fea0c9d6ffa9dbef957457161e1931b4e0a256 4675 kma_1.2.22-1_ppc64el.buildinfo fe55462494064ff9ee4d15bc1d84459d5cabb3ff3ea415b33a7c39e84004bc62 175256 kma_1.2.22-1_ppc64el.deb Files: 9eeb3c7543637dccc2a3f3fee1e8a1d1 526120 debug optional kma-dbgsym_1.2.22-1_ppc64el.deb fc37dd203e14f8b91bb723af985f19d3 4675 science optional kma_1.2.22-1_ppc64el.buildinfo faec3975de03d0c2baa3dc6f824c1fbf 175256 science optional kma_1.2.22-1_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kma Binary: kma Architecture: ppc64el Version: 1.2.22-1 Checksums-Md5: 9eeb3c7543637dccc2a3f3fee1e8a1d1 526120 kma-dbgsym_1.2.22-1_ppc64el.deb faec3975de03d0c2baa3dc6f824c1fbf 175256 kma_1.2.22-1_ppc64el.deb Checksums-Sha1: ed52bd22b04c2c5df9c0c12a736ed08418769cf0 526120 kma-dbgsym_1.2.22-1_ppc64el.deb cb9b7887dc1e25533e98c2430a741b38526b0ff3 175256 kma_1.2.22-1_ppc64el.deb Checksums-Sha256: e02511c128b4002d54602169ddde8d26faf6b79c92c8d7795865c59a781f587d 526120 kma-dbgsym_1.2.22-1_ppc64el.deb fe55462494064ff9ee4d15bc1d84459d5cabb3ff3ea415b33a7c39e84004bc62 175256 kma_1.2.22-1_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 06 May 2020 06:23:28 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-6), binutils-common (= 2.34-6), binutils-x86-64-linux-gnu (= 2.34-6), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.35.1-1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-11), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.0-1), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.35.1-1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-11), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200502-1), gcc-9 (= 9.3.0-11), gcc-9-base (= 9.3.0-11), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan5 (= 9.3.0-11), libatomic1 (= 10-20200502-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-6), libblkid1 (= 2.35.1-1), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.30-7), libc-dev-bin (= 2.30-7), libc6 (= 2.30-7), libc6-dev (= 2.30-7), libcap-ng0 (= 0.7.9-2.1+b2), libcc1-0 (= 10-20200502-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libctf-nobfd0 (= 2.34-6), libctf0 (= 2.34-6), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 13), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.35.1-1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.0-1), libgcc-9-dev (= 9.3.0-11), libgcc-s1 (= 10-20200502-1), libgcc1 (= 1:10-20200502-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.2-1), libgmp10 (= 2:6.2.0+dfsg-4), libgomp1 (= 10-20200502-1), libgpg-error0 (= 1.37-1), libicu63 (= 63.2-3), libisl22 (= 0.22.1-1), libitm1 (= 10-20200502-1), liblsan0 (= 10-20200502-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.35.1-1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libncursesw6 (= 6.2-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-10), libpipeline1 (= 1.5.2-2), libquadmath0 (= 10-20200502-1), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.1-1), libstdc++-9-dev (= 9.3.0-11), libstdc++6 (= 10-20200502-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.5-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10-20200502-1), libubsan1 (= 10-20200502-1), libuchardet0 (= 0.0.6-3), libudev1 (= 245.5-2), libunistring2 (= 0.9.10-2), libuuid1 (= 2.35.1-1), libxml2 (= 2.9.10+dfsg-5), linux-libc-dev (= 5.6.7-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), patch (= 2.7.6-6), perl (= 5.30.0-10), perl-base (= 5.30.0-10), perl-modules-5.30 (= 5.30.0-10), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.1-1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587857471" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kma-dbgsym_1.2.22-1_ppc64el.deb ------------------------------- new Debian package, version 2.0. size 526120 bytes: control archive=700 bytes. 440 bytes, 12 lines control 403 bytes, 4 lines md5sums Package: kma-dbgsym Source: kma Version: 1.2.22-1 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 577 Depends: kma (= 1.2.22-1) Section: debug Priority: optional Description: debug symbols for kma Build-Ids: 2b85e02a5cf55efc394d06cd222d5915ee1dede5 dc895889beab0bb3c5c55975faefd8a297bce065 f05c19cf4b0e769a92a6a7977cb86fb47e1cc766 drwxr-xr-x root/root 0 2020-04-25 23:31 ./ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.build-id/2b/ -rw-r--r-- root/root 22328 2020-04-25 23:31 ./usr/lib/debug/.build-id/2b/85e02a5cf55efc394d06cd222d5915ee1dede5.debug drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.build-id/dc/ -rw-r--r-- root/root 105856 2020-04-25 23:31 ./usr/lib/debug/.build-id/dc/895889beab0bb3c5c55975faefd8a297bce065.debug drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.build-id/f0/ -rw-r--r-- root/root 439640 2020-04-25 23:31 ./usr/lib/debug/.build-id/f0/5c19cf4b0e769a92a6a7977cb86fb47e1cc766.debug drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 7136 2020-04-25 23:31 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/kma.debug drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-25 23:31 ./usr/share/doc/kma-dbgsym -> kma kma_1.2.22-1_ppc64el.deb ------------------------ new Debian package, version 2.0. size 175256 bytes: control archive=1072 bytes. 885 bytes, 17 lines control 543 bytes, 9 lines md5sums Package: kma Version: 1.2.22-1 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 667 Depends: libc6 (>= 2.29), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://bitbucket.org/genomicepidemiology/kma Description: mapping genomic sequences to raw reads directly against redundant databases KMA is mapping a method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particularly good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non- unique matches are resolved using the "ConClave" sorting scheme, and a consensus sequence are outputtet in addition to other common attributes. drwxr-xr-x root/root 0 2020-04-25 23:31 ./ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/bin/ -rwxr-xr-x root/root 461400 2020-04-25 23:31 ./usr/bin/kma -rwxr-xr-x root/root 133416 2020-04-25 23:31 ./usr/bin/kma_index -rwxr-xr-x root/root 67736 2020-04-25 23:31 ./usr/bin/kma_shm drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/doc/kma/ -rw-r--r-- root/root 3037 2020-03-25 17:20 ./usr/share/doc/kma/README.md.gz -rw-r--r-- root/root 544 2020-04-25 23:31 ./usr/share/doc/kma/changelog.Debian.gz -rw-r--r-- root/root 952 2020-04-25 23:31 ./usr/share/doc/kma/copyright drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-25 23:31 ./usr/share/man/man1/ -rw-r--r-- root/root 1312 2020-04-25 23:31 ./usr/share/man/man1/kma.1.gz -rw-r--r-- root/root 697 2020-04-25 23:31 ./usr/share/man/man1/kma_index.1.gz -rw-r--r-- root/root 426 2020-04-25 23:31 ./usr/share/man/man1/kma_shm.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [540 B] Get:5 copy:/<>/apt_archive ./ Packages [630 B] Fetched 2133 B in 0s (93.1 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcpanel-json-xs-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-socket-ssl-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils 0 upgraded, 78 newly installed, 0 to remove and 0 not upgraded. Need to get 9224 kB of archives. After this operation, 26.3 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.20-1 [532 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-5 [661 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.20-1 [894 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b3 [71.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b3 [38.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1 [15.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.19-1 [126 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 4 [7148 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-3 [320 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.067-1 [212 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3200-1 [39.1 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.23-1 [369 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.45-1 [84.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.12-1 [12.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004001-1 [13.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.004000-1 [59.4 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.112-1 [53.5 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.011+ds-1 [106 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.011+ds-1 [108 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.010001-1 [338 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b1 [20.2 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-writer-perl all 0.625-1 [29.7 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1 [35.6 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.71.0 [1287 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9224 kB in 0s (61.0 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20263 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Setting up libjson-maybexs-perl (1.004001-1) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up libxml-writer-perl (0.625-1) ... Setting up t1utils (1.41-4) ... Setting up liblinux-epoll-perl (0.017-1) ... Setting up diffstat (1.63-1) ... Setting up libvariable-magic-perl (0.62-1+b2) ... Setting up libb-hooks-op-check-perl (0.22-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3200-1) ... Setting up libsub-name-perl (0.26-1) ... Setting up libpath-tiny-perl (0.112-1) ... Setting up librole-tiny-perl (2.001004-1) ... Setting up netbase (6.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.011+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010001-1) ... Setting up libnet-dns-perl (1.23-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.71.0) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 12532 Build-Time: 23 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 18 Job: kma_1.2.22-1 Lintian: pass Machine Architecture: amd64 Package: kma Package-Time: 51 Source-Version: 1.2.22-1 Space: 12532 Status: successful Version: 1.2.22-1 -------------------------------------------------------------------------------- Finished at 2020-05-06T06:23:28Z Build needed 00:00:51, 12532k disk space