sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | kma 1.4.15-1 (s390x) Tue, 15 Oct 2024 05:32:01 +0000 | +==============================================================================+ Package: kma Version: 1.4.15-1 Source Version: 1.4.15-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-89cd6810-5990-41d6-a67b-b4ac3deef16b' with '<>' I: NOTICE: Log filtering will replace 'build/kma-GouJVW/resolver-zESVFF' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [202 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-10-15-0300.55-F-2024-10-15-0300.55.pdiff [19.0 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-10-15-0300.55-F-2024-10-15-0300.55.pdiff [62.1 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-10-15-0300.55-F-2024-10-15-0300.55.pdiff [19.0 kB] Get:6 http://localhost:3142/debian sid/main s390x Packages [9598 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-10-15-0300.55-F-2024-10-15-0300.55.pdiff [62.1 kB] Fetched 10.0 MB in 2s (4857 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kma' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kma.git Please use: git clone https://salsa.debian.org/med-team/kma.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 635 kB of source archives. Get:1 http://localhost:3142/debian sid/main kma 1.4.15-1 (dsc) [2240 B] Get:2 http://localhost:3142/debian sid/main kma 1.4.15-1 (tar) [626 kB] Get:3 http://localhost:3142/debian sid/main kma 1.4.15-1 (diff) [6708 B] Fetched 635 kB in 1s (589 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kma-GouJVW/kma-1.4.15' with '<>' I: NOTICE: Log filtering will replace 'build/kma-GouJVW' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [726 B] Get:5 copy:/<>/apt_archive ./ Packages [769 B] Fetched 2104 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: login mount tzdata Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libicu72 libitm1:s390x libitm1-s390x-cross libmagic-mgc libmagic1t64 libpipeline1 libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml2 linux-libc-dev-s390x-cross m4 man-db po-debconf sensible-utils zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x libnss-nis:s390x libnss-nisplus:s390x manpages-dev:s390x libstdc++-14-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:s390x libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libicu72 libitm1:s390x libitm1-s390x-cross libmagic-mgc libmagic1t64 libpipeline1 libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml2 linux-libc-dev-s390x-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 70 newly installed, 0 to remove and 0 not upgraded. Need to get 85.9 MB of archives. After this operation, 336 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:5 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:6 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:7 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:8 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:9 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get:10 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://localhost:3142/debian sid/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:12 http://localhost:3142/debian sid/main amd64 m4 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[1448 B] Get:33 http://localhost:3142/debian sid/main amd64 linux-libc-dev-s390x-cross all 6.11.2-1cross1 [2262 kB] Get:34 http://localhost:3142/debian sid/main amd64 libc6-dev-s390x-cross all 2.40-3cross1 [1521 kB] Get:35 http://localhost:3142/debian sid/main amd64 libstdc++-14-dev-s390x-cross all 14.2.0-6cross1 [2377 kB] Get:36 http://localhost:3142/debian sid/main amd64 g++-14-s390x-linux-gnu amd64 14.2.0-6cross1 [10.4 MB] Get:37 http://localhost:3142/debian sid/main amd64 g++-s390x-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:38 http://localhost:3142/debian sid/main amd64 crossbuild-essential-s390x all 12.12 [3548 B] Get:39 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:40 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:41 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:42 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:43 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http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:55 http://localhost:3142/debian sid/main s390x gcc-14-base s390x 14.2.0-6 [46.7 kB] Get:56 http://localhost:3142/debian sid/main s390x libgcc-s1 s390x 14.2.0-6 [31.9 kB] Get:57 http://localhost:3142/debian sid/main s390x libc6 s390x 2.40-3 [2410 kB] Get:58 http://localhost:3142/debian sid/main s390x libasan8 s390x 14.2.0-6 [2572 kB] Get:59 http://localhost:3142/debian sid/main s390x libatomic1 s390x 14.2.0-6 [8580 B] Get:60 http://localhost:3142/debian sid/main s390x libcrypt1 s390x 1:4.4.36-5 [93.9 kB] Get:61 http://localhost:3142/debian sid/main s390x libcrypt-dev s390x 1:4.4.36-5 [122 kB] Get:62 http://localhost:3142/debian sid/main s390x libc6-dev s390x 2.40-3 [1526 kB] Get:63 http://localhost:3142/debian sid/main s390x libgomp1 s390x 14.2.0-6 [132 kB] Get:64 http://localhost:3142/debian sid/main s390x libitm1 s390x 14.2.0-6 [26.9 kB] Get:65 http://localhost:3142/debian sid/main s390x libstdc++6 s390x 14.2.0-6 [763 kB] Get:66 http://localhost:3142/debian sid/main s390x libubsan1 s390x 14.2.0-6 [1056 kB] Get:67 http://localhost:3142/debian sid/main s390x libgcc-14-dev s390x 14.2.0-6 [877 kB] Get:68 http://localhost:3142/debian sid/main s390x libstdc++-14-dev s390x 14.2.0-6 [2399 kB] Get:69 http://localhost:3142/debian sid/main s390x zlib1g s390x 1:1.3.dfsg+really1.3.1-1 [86.1 kB] Get:70 http://localhost:3142/debian sid/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1 [917 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 85.9 MB in 0s (187 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 12969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... 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Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../69-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5) ... Setting up binutils-s390x-linux-gnu (2.43.1-5) ... Setting up gcc-14-s390x-linux-gnu-base:amd64 (14.2.0-6cross1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:s390x (14.2.0-6) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libc6-s390x-cross (2.40-3cross1) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14.2.0-6cross1) ... Setting up file (1:5.45-3) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up linux-libc-dev-s390x-cross (6.11.2-1cross1) ... Setting up autopoint (0.22.5-2) ... Setting up libgcc-s1-s390x-cross (14.2.0-6cross1) ... Setting up cpp-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up autoconf (2.72-3) ... Setting up libitm1-s390x-cross (14.2.0-6cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libc6-dev-s390x-cross (2.40-3cross1) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libgomp1-s390x-cross (14.2.0-6cross1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up cpp-s390x-linux-gnu (4:14.2.0-1) ... Setting up libtool (2.4.7-7) ... Setting up libstdc++6-s390x-cross (14.2.0-6cross1) ... Setting up libatomic1-s390x-cross (14.2.0-6cross1) ... Setting up libasan8-s390x-cross (14.2.0-6cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libubsan1-s390x-cross (14.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-s390x-cross (14.2.0-6cross1) ... Setting up debhelper (13.20) ... Setting up gcc-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up gcc-s390x-linux-gnu (4:14.2.0-1) ... Setting up libstdc++-14-dev-s390x-cross (14.2.0-6cross1) ... Setting up g++-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up g++-s390x-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-s390x (12.12) ... Setting up libgcc-s1:s390x (14.2.0-6) ... Setting up libc6:s390x (2.40-3) ... Setting up libasan8:s390x (14.2.0-6) ... Setting up libstdc++6:s390x (14.2.0-6) ... Setting up libitm1:s390x (14.2.0-6) ... Setting up zlib1g:s390x (1:1.3.dfsg+really1.3.1-1) ... Setting up libcrypt1:s390x (1:4.4.36-5) ... Setting up libgomp1:s390x (14.2.0-6) ... Setting up libatomic1:s390x (14.2.0-6) ... Setting up libubsan1:s390x (14.2.0-6) ... Setting up libcrypt-dev:s390x (1:4.4.36-5) ... Setting up libc6-dev:s390x (2.40-3) ... Setting up libgcc-14-dev:s390x (14.2.0-6) ... Setting up libstdc++-14-dev:s390x (14.2.0-6) ... Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any-amd64 arm64 loong64 mips64el ppc64el s390x alpha ia64 ppc64 riscv64 sparc64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-6 gcc-14_14.2.0-6 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-6 libstdc++-14-dev-s390x-cross_14.2.0-6cross1 libstdc++6_14.2.0-6 libstdc++6-s390x-cross_14.2.0-6cross1 linux-libc-dev_6.11.2-1 Package versions: adduser_3.137 apt_2.9.8 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.32-1+b1 binutils_2.43.1-5 binutils-common_2.43.1-5 binutils-s390x-linux-gnu_2.43.1-5 binutils-x86-64-linux-gnu_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.4-3.1 cpp_4:14.2.0-1 cpp-14_14.2.0-6 cpp-14-s390x-linux-gnu_14.2.0-6cross1 cpp-14-x86-64-linux-gnu_14.2.0-6 cpp-s390x-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-s390x_12.12 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-6 g++-14-s390x-linux-gnu_14.2.0-6cross1 g++-14-x86-64-linux-gnu_14.2.0-6 g++-s390x-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-6 gcc-14-base_14.2.0-6 gcc-14-cross-base_14.2.0-6cross1 gcc-14-s390x-linux-gnu_14.2.0-6cross1 gcc-14-s390x-linux-gnu-base_14.2.0-6cross1 gcc-14-x86-64-linux-gnu_14.2.0-6 gcc-s390x-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 gpgv_2.2.44-1 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.8 libarchive-zip-perl_1.68-1 libasan8_14.2.0-6 libasan8-s390x-cross_14.2.0-6cross1 libatomic1_14.2.0-6 libatomic1-s390x-cross_14.2.0-6cross1 libattr1_1:2.5.2-2 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libbinutils_2.43.1-5 libblkid1_2.40.2-9 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libc6-dev-s390x-cross_2.40-3cross1 libc6-s390x-cross_2.40-3cross1 libcap-ng0_0.8.5-2 libcap2_1:2.66-5 libcc1-0_14.2.0-6 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libdb5.3t64_5.3.28+dfsg2-8 libdebconfclient0_0.272 libdebhelper-perl_13.20 libdpkg-perl_1.22.11 libelf1t64_0.191-2 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-14-dev_14.2.0-6 libgcc-14-dev-s390x-cross_14.2.0-6cross1 libgcc-s1_14.2.0-6 libgcc-s1-s390x-cross_14.2.0-6cross1 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-6 libgomp1-s390x-cross_14.2.0-6cross1 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libhogweed6t64_3.10-1 libhwasan0_14.2.0-6 libicu72_72.1-5 libidn2-0_2.3.7-2 libisl23_0.27-1 libitm1_14.2.0-6 libitm1-s390x-cross_14.2.0-6cross1 libjansson4_2.14-2+b2 liblsan0_14.2.0-6 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.2-9 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnettle8t64_3.10-1 libp11-kit0_0.25.5-2 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.40_5.40.0-6 libpipeline1_1.5.8-1 libquadmath0_14.2.0-6 libseccomp2_2.5.5-1+b1 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsframe1_2.43.1-5 libsmartcols1_2.40.2-9 libssl3t64_3.3.2-1 libstdc++-14-dev_14.2.0-6 libstdc++-14-dev-s390x-cross_14.2.0-6cross1 libstdc++6_14.2.0-6 libstdc++6-s390x-cross_14.2.0-6cross1 libsystemd0_256.7-1 libtasn1-6_4.19.0-3+b2 libtinfo6_6.5-2 libtool_2.4.7-7 libtsan2_14.2.0-6 libubsan1_14.2.0-6 libubsan1-s390x-cross_14.2.0-6cross1 libuchardet0_0.0.8-1+b1 libudev1_256.7-1 libunistring5_1.2-1 libuuid1_2.40.2-9 libxml2_2.12.7+dfsg+really2.9.14-0.1 libxxhash0_0.8.2-2+b1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.11.2-1 linux-libc-dev-s390x-cross_6.11.2-1cross1 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 mount_2.40.2-9 ncurses-base_6.5-2 ncurses-bin_6.5-2 openssl-provider-legacy_3.3.2-1 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.40.0-6 perl-base_5.40.0-6 perl-modules-5.40_5.40.0-6 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.10-2 tar_1.35+dfsg-3 tzdata_2024b-3 usr-is-merged_39 util-linux_2.40.2-9 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: kma Binary: kma Architecture: any-amd64 arm64 loong64 mips64el ppc64el s390x alpha ia64 ppc64 riscv64 sparc64 Version: 1.4.15-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://bitbucket.org/genomicepidemiology/kma Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/kma Vcs-Git: https://salsa.debian.org/med-team/kma.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: kma deb science optional arch=any-amd64,arm64,loong64,mips64el,ppc64el,s390x,alpha,ia64,ppc64,riscv64,sparc64 Checksums-Sha1: f7841bd9251936a9f853609b9e6c9454ad9b35ef 625932 kma_1.4.15.orig.tar.xz a14aefa48f49d8c4b982e49d0d4d54b2a644cbfa 6708 kma_1.4.15-1.debian.tar.xz Checksums-Sha256: 9accc598bbd1ccd797cf6e4eac761c3ff5b4a823d0769a5f096f08eed7b957aa 625932 kma_1.4.15.orig.tar.xz 563688ced79c7ae0067430f496d75cfc789b354e7adeb48f6dcd6a18f5f0160e 6708 kma_1.4.15-1.debian.tar.xz Files: eb0bfcb6880ce056692cfd9948b9a840 625932 kma_1.4.15.orig.tar.xz 7d2142f54e921f5d1de479a56a857355 6708 kma_1.4.15-1.debian.tar.xz Dgit: ea2b20a272a656c86820df3d223a05d0cff8130e debian archive/debian/1.4.15-1 https://git.dgit.debian.org/kma -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmbHoz8UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdr0ahAAup0ZrO3jni5T45yLQ/twqBGov1ZF 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dpkg-source: info: extracting kma in /<> dpkg-source: info: unpacking kma_1.4.15.orig.tar.xz dpkg-source: info: unpacking kma_1.4.15-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying blhc.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.Kici9tCss6/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-89cd6810-5990-41d6-a67b-b4ac3deef16b SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kma dpkg-buildpackage: info: source version 1.4.15-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f align.o alnfrags.o ankers.o assembly.o chain.o compdna.o compkmers.o compress.o conclave.o db.o decon.o dist.o ef.o filebuff.o frags.o hashmap.o hashmapcci.o hashmapkma.o hashmapkmers.o hashtable.o index.o kma.o kmapipe.o kmeranker.o kmers.o kmmap.o loadupdate.o makeindex.o matrix.o mt1.o nw.o pherror.o printconsensus.o qseqs.o qualcheck.o runinput.o runkma.o sam.o savekmers.o seq2fasta.o seqmenttree.o seqparse.o shm.o sparse.o spltdb.o stdnuc.o stdstat.o trim.o tmp.o tsv.o update.o updateindex.o updatescores.o valueshash.o vcf.o xml.o kma kma_index kma_shm kma_update libkma.a make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc make[1]: Entering directory '/<>' s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o align.o align.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o alnfrags.o alnfrags.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ankers.o ankers.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o assembly.o assembly.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o chain.o chain.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compdna.o compdna.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compkmers.o compkmers.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compress.o compress.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o conclave.o conclave.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o db.o db.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o decon.o decon.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dist.o dist.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ef.o ef.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o filebuff.o filebuff.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o frags.o frags.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmap.o hashmap.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapcci.o hashmapcci.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapkma.o hashmapkma.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashmapkmers.o hashmapkmers.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o hashtable.o hashtable.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o index.o index.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kma.o kma.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmapipe.o kmapipe.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmeranker.o kmeranker.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmers.o kmers.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kmmap.o kmmap.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadupdate.o loadupdate.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o makeindex.o makeindex.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o matrix.o matrix.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mt1.o mt1.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o nw.o nw.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pherror.o pherror.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o printconsensus.o printconsensus.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qseqs.o qseqs.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qualcheck.o qualcheck.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o runinput.o runinput.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o runkma.o runkma.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam.o sam.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o savekmers.o savekmers.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seq2fasta.o seq2fasta.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seqmenttree.o seqmenttree.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seqparse.o seqparse.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o shm.o shm.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sparse.o sparse.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o spltdb.o spltdb.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdnuc.o stdnuc.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdstat.o stdstat.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o trim.o trim.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tmp.o tmp.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tsv.o tsv.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o update.o update.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o updateindex.o updateindex.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o updatescores.o updatescores.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o valueshash.o valueshash.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vcf.o vcf.c s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xml.o xml.c ar -csr libkma.a align.o alnfrags.o ankers.o assembly.o chain.o compdna.o compkmers.o compress.o conclave.o db.o decon.o dist.o ef.o filebuff.o frags.o hashmap.o hashmapcci.o hashmapkma.o hashmapkmers.o hashtable.o index.o kma.o kmapipe.o kmeranker.o kmers.o kmmap.o loadupdate.o makeindex.o matrix.o mt1.o nw.o pherror.o printconsensus.o qseqs.o qualcheck.o runinput.o runkma.o sam.o savekmers.o seq2fasta.o seqmenttree.o seqparse.o shm.o sparse.o spltdb.o stdnuc.o stdstat.o trim.o tmp.o tsv.o update.o updateindex.o updatescores.o valueshash.o vcf.o xml.o s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -o kma main.c libkma.a -lm -lpthread -lz -Wl,-z,relro -Wl,-z,now s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -o kma_index kma_index.c libkma.a -lm -lz -Wl,-z,relro -Wl,-z,now s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -o kma_shm kma_shm.c libkma.a -Wl,-z,relro -Wl,-z,now s390x-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -o kma_update kma_update.c libkma.a -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/kma/ -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'kma' in '../kma_1.4.15-1_s390x.deb'. dpkg-deb: building package 'kma-dbgsym' in '../kma-dbgsym_1.4.15-1_s390x.deb'. dpkg-genbuildinfo --build=any -O../kma_1.4.15-1_s390x.buildinfo dpkg-genchanges --build=any -O../kma_1.4.15-1_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-10-15T05:32:42Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kma_1.4.15-1_s390x.changes: --------------------------- Format: 1.8 Date: Thu, 22 Aug 2024 21:33:34 +0200 Source: kma Binary: kma kma-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 1.4.15-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: kma - mapping genomic sequences to raw reads directly against redundant Changes: kma (1.4.15-1) unstable; urgency=medium . * New upstream version 1.4.15 * blhc.patch: change forwarding status to not-needed. * d/control: add myself to uploaders. * d/control: declare compliance to standards version 4.7.0. 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lines control 397 bytes, 4 lines md5sums Package: kma-dbgsym Source: kma Version: 1.4.15-1 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 739 Depends: kma (= 1.4.15-1) Section: debug Priority: optional Description: debug symbols for kma Build-Ids: 06d5ec34bf7b154d85b3079c017e0120aa58d263 43e1ad9237cfedb185bee5988da58a5ee498e1e0 dffa4d03e69f076b9dbcee33d72d701ba93e913e drwxr-xr-x root/root 0 2024-08-22 19:33 ./ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.build-id/06/ -rw-r--r-- root/root 586568 2024-08-22 19:33 ./usr/lib/debug/.build-id/06/d5ec34bf7b154d85b3079c017e0120aa58d263.debug drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.build-id/43/ -rw-r--r-- root/root 113576 2024-08-22 19:33 ./usr/lib/debug/.build-id/43/e1ad9237cfedb185bee5988da58a5ee498e1e0.debug drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.build-id/df/ -rw-r--r-- root/root 31888 2024-08-22 19:33 ./usr/lib/debug/.build-id/df/fa4d03e69f076b9dbcee33d72d701ba93e913e.debug drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 8960 2024-08-22 19:33 ./usr/lib/debug/.dwz/s390x-linux-gnu/kma.debug drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-08-22 19:33 ./usr/share/doc/kma-dbgsym -> kma kma_1.4.15-1_s390x.deb ---------------------- new Debian package, version 2.0. size 242180 bytes: control archive=1064 bytes. 883 bytes, 17 lines control 543 bytes, 9 lines md5sums Package: kma Version: 1.4.15-1 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 684 Depends: libc6 (>= 2.34), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://bitbucket.org/genomicepidemiology/kma Description: mapping genomic sequences to raw reads directly against redundant databases KMA is mapping a method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particularly good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non- unique matches are resolved using the "ConClave" sorting scheme, and a consensus sequence are outputtet in addition to other common attributes. drwxr-xr-x root/root 0 2024-08-22 19:33 ./ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/bin/ -rwxr-xr-x root/root 551624 2024-08-22 19:33 ./usr/bin/kma -rwxr-xr-x root/root 100616 2024-08-22 19:33 ./usr/bin/kma_index -rwxr-xr-x root/root 26824 2024-08-22 19:33 ./usr/bin/kma_shm drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/doc/kma/ -rw-r--r-- root/root 3057 2024-05-29 06:09 ./usr/share/doc/kma/README.md.gz -rw-r--r-- root/root 1548 2024-08-22 19:33 ./usr/share/doc/kma/changelog.Debian.gz -rw-r--r-- root/root 957 2024-08-22 19:33 ./usr/share/doc/kma/copyright drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/man/ drwxr-xr-x root/root 0 2024-08-22 19:33 ./usr/share/man/man1/ -rw-r--r-- root/root 1620 2024-08-22 19:33 ./usr/share/man/man1/kma.1.gz -rw-r--r-- root/root 732 2024-08-22 19:33 ./usr/share/man/man1/kma_index.1.gz -rw-r--r-- root/root 454 2024-08-22 19:33 ./usr/share/man/man1/kma_shm.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1308 B] Get:5 copy:/<>/apt_archive ./ Packages [1387 B] Fetched 3310 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The solver encountered an error of type: ERR_UNSOLVABLE The following information might help you to understand what is wrong: Unsatisfied dependencies: libnetaddr-ip-perl : Depends: perlapi-5.38.2 but it is not installable libsyntax-keyword-try-perl : Depends: perlapi-5.38.2 but it is not installable libsereal-encoder-perl : Depends: perlapi-5.38.2 but it is not installable libtext-xslate-perl : Depends: perlapi-5.38.2 but it is not installable Depends: libdata-messagepack-perl but it is not going to be installed Depends: libmouse-perl but it is not going to be installed libparams-classify-perl : Depends: libdevel-callchecker-perl but it is not going to be installed Depends: perlapi-5.38.2 but it is not installable libhtml-parser-perl : Depends: perlapi-5.38.2 but it is not installable libberkeleydb-perl : Depends: perlapi-5.38.2 but it is not installable libunicode-utf8-perl : Depends: perlapi-5.38.2 but it is not installable libparams-util-perl : Depends: perlapi-5.38.2 but it is not installable libtime-moment-perl : Depends: perlapi-5.38.2 but it is not installable libclone-perl : Depends: perlapi-5.38.2 but it is not installable libcpanel-json-xs-perl : Depends: perlapi-5.38.2 but it is not installable Execute external solver... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: sbuild-build-depends-lintian-dummy:s390x : Depends: lintian:amd64 E: External solver failed with: Unsatisfied dependencies: apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 13968 Build-Time: 22 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 8 Job: kma_1.4.15-1 Lintian: error Machine Architecture: amd64 Package: kma Package-Time: 41 Source-Version: 1.4.15-1 Space: 13968 Status: successful Version: 1.4.15-1 -------------------------------------------------------------------------------- Finished at 2024-10-15T05:32:42Z Build needed 00:00:41, 13968k disk space