sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kmc 2.3+dfsg-7 (armhf) Mon, 11 Feb 2019 18:43:31 +0000 | +==============================================================================+ Package: kmc Version: 2.3+dfsg-7 Source Version: 2.3+dfsg-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: armhf Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-ac6226c5-4de2-4bb1-9648-580a35e62c49' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [243 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-11-0811.25.pdiff [5433 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-11-1411.49.pdiff [15.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-11-0811.25.pdiff [57.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-11-1411.49.pdiff [66.8 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-02-11-1411.49.pdiff [15.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-02-11-1411.49.pdiff [66.8 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main armhf Packages [8132 kB] Fetched 8575 kB in 2s (5028 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg5.0 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2322 kB of archives. After this operation, 51.2 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg5.0 amd64 1.8.0~rc3 [966 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 apt amd64 1.8.0~rc3 [1356 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2322 kB in 0s (72.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11799 files and directories currently installed.) Preparing to unpack .../libapt-pkg5.0_1.8.0~rc3_amd64.deb ... Unpacking libapt-pkg5.0:amd64 (1.8.0~rc3) over (1.8.0~rc2) ... Setting up libapt-pkg5.0:amd64 (1.8.0~rc3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11799 files and directories currently installed.) Preparing to unpack .../apt_1.8.0~rc3_amd64.deb ... Unpacking apt (1.8.0~rc3) over (1.8.0~rc2) ... Setting up apt (1.8.0~rc3) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kmc.git Please use: git clone https://salsa.debian.org/med-team/kmc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 163 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (dsc) [2158 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (tar) [129 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (diff) [31.6 kB] Fetched 163 kB in 0s (1655 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kmc-RTjwU9/kmc-2.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-RTjwU9' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-ZxCWkl/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZxCWkl/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-ZxCWkl/apt_archive ./ Packages [451 B] Fetched 1771 B in 0s (93.2 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armhf-cross libgcc1-dbg-armhf-cross libgomp1-dbg-armhf-cross libitm1-dbg-armhf-cross libatomic1-dbg-armhf-cross libasan5-dbg-armhf-cross liblsan0-dbg-armhf-cross libtsan0-dbg-armhf-cross libubsan1-dbg-armhf-cross libmpx2-dbg-armhf-cross libquadmath0-dbg-armhf-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabihf gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabihf cpp-8-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cross-config crossbuild-essential-armhf dpkg-cross file g++-8-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf gcc-8-arm-linux-gnueabihf-base gcc-8-cross-base gcc-arm-linux-gnueabihf libasan5-armhf-cross libatomic1-armhf-cross libc6-armhf-cross libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armhf-cross libgcc1-armhf-cross libgomp1-armhf-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armhf-cross libstdc++6-armhf-cross libubsan1-armhf-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armhf-cross sbuild-build-depends-core-dummy:armhf sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 152 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-2 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-2 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-2 [66.1 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabihf amd64 2.31.1-12 [2832 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf-base amd64 8.2.0-20cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabihf amd64 8.2.0-20cross1 [6557 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabihf amd64 4:8.2.0-2 [16.4 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.2.0-20cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armhf-cross all 2.28-4cross1 [1170 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armhf-cross all 1:8.2.0-20cross1 [37.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armhf-cross all 8.2.0-20cross1 [63.1 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armhf-cross all 8.2.0-20cross1 [6564 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armhf-cross all 8.2.0-20cross1 [301 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armhf-cross all 8.2.0-20cross1 [330 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armhf-cross all 8.2.0-20cross1 [104 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armhf-cross all 8.2.0-20cross1 [613 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabihf amd64 8.2.0-20cross1 [6974 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabihf amd64 4:8.2.0-2 [1456 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armhf-cross all 4.19.13-1cross1 [1196 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armhf-cross all 2.28-4cross1 [2148 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armhf-cross all 8.2.0-20cross1 [1554 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabihf amd64 8.2.0-20cross1 [7133 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabihf amd64 4:8.2.0-2 [1180 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0133+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armhf all 12.5 [6544 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (68.8 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11811 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-2_amd64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-arm-linux-gnueabihf. Preparing to unpack .../06-binutils-arm-linux-gnueabihf_2.31.1-12_amd64.deb ... Unpacking binutils-arm-linux-gnueabihf (2.31.1-12) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf-base:amd64. Preparing to unpack .../07-gcc-8-arm-linux-gnueabihf-base_8.2.0-20cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf-base:amd64 (8.2.0-20cross1) ... Selecting previously unselected package cpp-8-arm-linux-gnueabihf. Preparing to unpack .../08-cpp-8-arm-linux-gnueabihf_8.2.0-20cross1_amd64.deb ... Unpacking cpp-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Selecting previously unselected package cpp-arm-linux-gnueabihf. Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. Preparing to unpack .../11-gcc-8-cross-base_8.2.0-20cross1_all.deb ... Unpacking gcc-8-cross-base (8.2.0-20cross1) ... Selecting previously unselected package libc6-armhf-cross. Preparing to unpack .../12-libc6-armhf-cross_2.28-4cross1_all.deb ... Unpacking libc6-armhf-cross (2.28-4cross1) ... Selecting previously unselected package libgcc1-armhf-cross. Preparing to unpack .../13-libgcc1-armhf-cross_1%3a8.2.0-20cross1_all.deb ... Unpacking libgcc1-armhf-cross (1:8.2.0-20cross1) ... Selecting previously unselected package libgomp1-armhf-cross. Preparing to unpack .../14-libgomp1-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libgomp1-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package libatomic1-armhf-cross. Preparing to unpack .../15-libatomic1-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libatomic1-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package libstdc++6-armhf-cross. Preparing to unpack .../16-libstdc++6-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libstdc++6-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package libasan5-armhf-cross. Preparing to unpack .../17-libasan5-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libasan5-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package libubsan1-armhf-cross. Preparing to unpack .../18-libubsan1-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libubsan1-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package libgcc-8-dev-armhf-cross. Preparing to unpack .../19-libgcc-8-dev-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libgcc-8-dev-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package gcc-8-arm-linux-gnueabihf. Preparing to unpack .../20-gcc-8-arm-linux-gnueabihf_8.2.0-20cross1_amd64.deb ... Unpacking gcc-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Selecting previously unselected package gcc-arm-linux-gnueabihf. Preparing to unpack .../21-gcc-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking gcc-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package linux-libc-dev-armhf-cross. Preparing to unpack .../22-linux-libc-dev-armhf-cross_4.19.13-1cross1_all.deb ... Unpacking linux-libc-dev-armhf-cross (4.19.13-1cross1) ... Selecting previously unselected package libc6-dev-armhf-cross. Preparing to unpack .../23-libc6-dev-armhf-cross_2.28-4cross1_all.deb ... Unpacking libc6-dev-armhf-cross (2.28-4cross1) ... Selecting previously unselected package libstdc++-8-dev-armhf-cross. Preparing to unpack .../24-libstdc++-8-dev-armhf-cross_8.2.0-20cross1_all.deb ... Unpacking libstdc++-8-dev-armhf-cross (8.2.0-20cross1) ... Selecting previously unselected package g++-8-arm-linux-gnueabihf. Preparing to unpack .../25-g++-8-arm-linux-gnueabihf_8.2.0-20cross1_amd64.deb ... Unpacking g++-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Selecting previously unselected package g++-arm-linux-gnueabihf. Preparing to unpack .../26-g++-arm-linux-gnueabihf_4%3a8.2.0-2_amd64.deb ... Unpacking g++-arm-linux-gnueabihf (4:8.2.0-2) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../27-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../28-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../29-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../30-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../31-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../32-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../33-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../34-libxml-libxml-perl_2.0133+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0133+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../35-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../36-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../37-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../38-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../39-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../40-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../41-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-armhf. Preparing to unpack .../42-crossbuild-essential-armhf_12.5_all.deb ... Unpacking crossbuild-essential-armhf (12.5) ... Selecting previously unselected package sbuild-build-depends-core-dummy:armhf. Preparing to unpack .../43-sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Setting up gcc-8-cross-base (8.2.0-20cross1) ... Setting up libc6-armhf-cross (2.28-4cross1) ... Setting up libgcc1-armhf-cross (1:8.2.0-20cross1) ... Setting up libstdc++6-armhf-cross (8.2.0-20cross1) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libfile-which-perl (1.23-1) ... Setting up libubsan1-armhf-cross (8.2.0-20cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up binutils-arm-linux-gnueabihf (2.31.1-12) ... Setting up libyaml-perl (1.27-1) ... Setting up libgomp1-armhf-cross (8.2.0-20cross1) ... Setting up linux-libc-dev-armhf-cross (4.19.13-1cross1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up libatomic1-armhf-cross (8.2.0-20cross1) ... Setting up libmagic-mgc (1:5.35-2) ... Setting up libmagic1:amd64 (1:5.35-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up sensible-utils (0.0.12) ... Setting up cross-config (2.6.15-2) ... Setting up libio-string-perl (1.08-3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up gcc-8-arm-linux-gnueabihf-base:amd64 (8.2.0-20cross1) ... Setting up libasan5-armhf-cross (8.2.0-20cross1) ... Setting up libgcc-8-dev-armhf-cross (8.2.0-20cross1) ... Setting up libc6-dev-armhf-cross (2.28-4cross1) ... Setting up file (1:5.35-2) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++-8-dev-armhf-cross (8.2.0-20cross1) ... Setting up cpp-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Setting up cpp-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up gcc-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Setting up gcc-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-8-arm-linux-gnueabihf (8.2.0-20cross1) ... Setting up libxml-libxml-perl (2.0133+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-arm-linux-gnueabihf (4:8.2.0-2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armhf (12.5) ... Setting up sbuild-build-depends-core-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-ZxCWkl/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZxCWkl/apt_archive ./ Sources [485 B] Get:5 copy:/<>/resolver-ZxCWkl/apt_archive ./ Packages [571 B] Fetched 2019 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armhf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armhf. (Reading database ... 14857 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armhf (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs dpkg-deb: building package 'sbuild-build-depends-kmc-dummy' in '/<>/resolver-ZxCWkl/apt_archive/sbuild-build-depends-kmc-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-kmc-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZxCWkl/apt_archive ./ Sources [671 B] Get:5 copy:/<>/resolver-ZxCWkl/apt_archive ./ Packages [755 B] Fetched 2389 B in 0s (0 B/s) Reading package lists... Reading package lists... Install kmc build dependencies (apt-based resolver) --------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: asciidoctor autoconf automake autopoint autotools-dev bsdmainutils ca-certificates d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libreadline7 libruby2.5 libsigsegv2 libssl1.1 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 libyaml-0-2 linux-libc-dev:armhf m4 man-db openssl po-debconf rake readline-common ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5 rubygems-integration zlib1g:armhf zlib1g-dev:armhf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf manpages-dev:armhf libstdc++-8-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl readline-doc ri ruby-dev bundler Recommended packages: curl | wget | lynx bzip2-doc:armhf libidn2-0:armhf libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl zip fonts-lato libjs-jquery The following NEW packages will be installed: asciidoctor autoconf automake autopoint autotools-dev bsdmainutils ca-certificates d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz gcc-8-base:armhf gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:armhf libatomic1:armhf libbsd0 libbz2-1.0:armhf libbz2-dev:armhf libc6:armhf libc6-dev:armhf libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:armhf libgcc1:armhf libglib2.0-0 libgomp1:armhf libncurses6 libpipeline1 libreadline7 libruby2.5 libsigsegv2 libssl1.1 libstdc++-8-dev:armhf libstdc++6:armhf libtool libubsan1:armhf libuchardet0 libyaml-0-2 linux-libc-dev:armhf m4 man-db openssl po-debconf rake readline-common ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5 rubygems-integration sbuild-build-depends-kmc-dummy:armhf zlib1g:armhf zlib1g-dev:armhf 0 upgraded, 66 newly installed, 0 to remove and 0 not upgraded. Need to get 26.2 MB of archives. After this operation, 105 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ sbuild-build-depends-kmc-dummy 0.invalid.0 [912 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-1 [99.3 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-2 [917 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1a-1 [1527 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 1.1.1a-1 [836 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 ca-certificates all 20190110 [157 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 rubygems-integration all 1.11 [4994 B] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 rake all 12.3.1-3 [66.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-did-you-mean all 1.2.1-1 [14.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-minitest all 5.11.3-1 [54.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-power-assert all 1.1.1-1 [10.9 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-test-unit all 3.2.8-1 [72.4 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-xmlrpc all 0.3.0-2 [23.7 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-1 [102 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libruby2.5 amd64 2.5.3-3 [3429 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 ruby2.5 amd64 2.5.3-3 [393 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 ruby amd64 1:2.5.1 [11.3 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-asciidoctor all 1.5.8-1 [188 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 asciidoctor all 1.5.8-1 [75.8 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-9 [547 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.0-1 [12.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.175-2 [160 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1 [1015 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 dh-exec amd64 0.23.1 [26.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main armhf gcc-8-base armhf 8.2.0-20 [189 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.8 [177 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main armhf libgcc1 armhf 1:8.2.0-20 [37.0 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main armhf libc6 armhf 2.28-7 [2388 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++6 armhf 8.2.0-20 [337 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main armhf libasan5 armhf 8.2.0-20 [337 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main armhf libatomic1 armhf 8.2.0-20 [6732 B] Get:57 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-1.0 armhf 1.0.6-9 [43.6 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main armhf linux-libc-dev armhf 4.19.16-1 [1113 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main armhf libc6-dev armhf 2.28-7 [2150 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main armhf libbz2-dev armhf 1.0.6-9 [28.9 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main armhf libgomp1 armhf 8.2.0-20 [64.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main armhf libubsan1 armhf 8.2.0-20 [104 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main armhf libgcc-8-dev armhf 8.2.0-20 [614 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main armhf libstdc++-8-dev armhf 8.2.0-20 [1581 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g armhf 1:1.2.11.dfsg-1 [87.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 26.2 MB in 0s (60.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14857 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-2_amd64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../08-libssl1.1_1.1.1a-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1a-1) ... Selecting previously unselected package openssl. Preparing to unpack .../09-openssl_1.1.1a-1_amd64.deb ... Unpacking openssl (1.1.1a-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../10-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) ... Selecting previously unselected package rubygems-integration. Preparing to unpack .../11-rubygems-integration_1.11_all.deb ... Unpacking rubygems-integration (1.11) ... Selecting previously unselected package rake. Preparing to unpack .../12-rake_12.3.1-3_all.deb ... Unpacking rake (12.3.1-3) ... Selecting previously unselected package ruby-did-you-mean. Preparing to unpack .../13-ruby-did-you-mean_1.2.1-1_all.deb ... Unpacking ruby-did-you-mean (1.2.1-1) ... Selecting previously unselected package ruby-minitest. Preparing to unpack .../14-ruby-minitest_5.11.3-1_all.deb ... Unpacking ruby-minitest (5.11.3-1) ... Selecting previously unselected package ruby-net-telnet. Preparing to unpack .../15-ruby-net-telnet_0.1.1-2_all.deb ... Unpacking ruby-net-telnet (0.1.1-2) ... Selecting previously unselected package ruby-power-assert. Preparing to unpack .../16-ruby-power-assert_1.1.1-1_all.deb ... Unpacking ruby-power-assert (1.1.1-1) ... Selecting previously unselected package ruby-test-unit. Preparing to unpack .../17-ruby-test-unit_3.2.8-1_all.deb ... Unpacking ruby-test-unit (3.2.8-1) ... Selecting previously unselected package ruby-xmlrpc. Preparing to unpack .../18-ruby-xmlrpc_0.3.0-2_all.deb ... Unpacking ruby-xmlrpc (0.3.0-2) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../19-libncurses6_6.1+20181013-1_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../20-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../21-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libruby2.5:amd64. Preparing to unpack .../22-libruby2.5_2.5.3-3_amd64.deb ... Unpacking libruby2.5:amd64 (2.5.3-3) ... Selecting previously unselected package ruby2.5. Preparing to unpack .../23-ruby2.5_2.5.3-3_amd64.deb ... Unpacking ruby2.5 (2.5.3-3) ... Selecting previously unselected package ruby. Preparing to unpack .../24-ruby_1%3a2.5.1_amd64.deb ... Unpacking ruby (1:2.5.1) ... Selecting previously unselected package ruby-asciidoctor. Preparing to unpack .../25-ruby-asciidoctor_1.5.8-1_all.deb ... Unpacking ruby-asciidoctor (1.5.8-1) ... Selecting previously unselected package asciidoctor. Preparing to unpack .../26-asciidoctor_1.5.8-1_all.deb ... Unpacking asciidoctor (1.5.8-1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../27-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../28-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../29-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../30-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../31-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../32-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../33-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../34-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../35-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../36-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../37-libfile-stripnondeterminism-perl_1.1.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../38-dh-strip-nondeterminism_1.1.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../39-libelf1_0.175-2_amd64.deb ... Unpacking libelf1:amd64 (0.175-2) ... Selecting previously unselected package dwz. Preparing to unpack .../40-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../41-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../42-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../43-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../44-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../45-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../46-debhelper_12.1_all.deb ... Unpacking debhelper (12.1) ... Selecting previously unselected package dh-exec. Preparing to unpack .../47-dh-exec_0.23.1_amd64.deb ... Unpacking dh-exec (0.23.1) ... Selecting previously unselected package gcc-8-base:armhf. Preparing to unpack .../48-gcc-8-base_8.2.0-20_armhf.deb ... Unpacking gcc-8-base:armhf (8.2.0-20) ... Selecting previously unselected package help2man. Preparing to unpack .../49-help2man_1.47.8_amd64.deb ... Unpacking help2man (1.47.8) ... Selecting previously unselected package libgcc1:armhf. Preparing to unpack .../50-libgcc1_1%3a8.2.0-20_armhf.deb ... Unpacking libgcc1:armhf (1:8.2.0-20) ... Selecting previously unselected package libc6:armhf. Preparing to unpack .../51-libc6_2.28-7_armhf.deb ... Unpacking libc6:armhf (2.28-7) ... Selecting previously unselected package libstdc++6:armhf. Preparing to unpack .../52-libstdc++6_8.2.0-20_armhf.deb ... Unpacking libstdc++6:armhf (8.2.0-20) ... Selecting previously unselected package libasan5:armhf. Preparing to unpack .../53-libasan5_8.2.0-20_armhf.deb ... Unpacking libasan5:armhf (8.2.0-20) ... Selecting previously unselected package libatomic1:armhf. Preparing to unpack .../54-libatomic1_8.2.0-20_armhf.deb ... Unpacking libatomic1:armhf (8.2.0-20) ... Selecting previously unselected package libbz2-1.0:armhf. Preparing to unpack .../55-libbz2-1.0_1.0.6-9_armhf.deb ... Unpacking libbz2-1.0:armhf (1.0.6-9) ... Selecting previously unselected package linux-libc-dev:armhf. Preparing to unpack .../56-linux-libc-dev_4.19.16-1_armhf.deb ... Unpacking linux-libc-dev:armhf (4.19.16-1) ... Selecting previously unselected package libc6-dev:armhf. Preparing to unpack .../57-libc6-dev_2.28-7_armhf.deb ... Unpacking libc6-dev:armhf (2.28-7) ... Selecting previously unselected package libbz2-dev:armhf. Preparing to unpack .../58-libbz2-dev_1.0.6-9_armhf.deb ... Unpacking libbz2-dev:armhf (1.0.6-9) ... Selecting previously unselected package libgomp1:armhf. Preparing to unpack .../59-libgomp1_8.2.0-20_armhf.deb ... Unpacking libgomp1:armhf (8.2.0-20) ... Selecting previously unselected package libubsan1:armhf. Preparing to unpack .../60-libubsan1_8.2.0-20_armhf.deb ... Unpacking libubsan1:armhf (8.2.0-20) ... Selecting previously unselected package libgcc-8-dev:armhf. Preparing to unpack .../61-libgcc-8-dev_8.2.0-20_armhf.deb ... Unpacking libgcc-8-dev:armhf (8.2.0-20) ... Selecting previously unselected package libstdc++-8-dev:armhf. Preparing to unpack .../62-libstdc++-8-dev_8.2.0-20_armhf.deb ... Unpacking libstdc++-8-dev:armhf (8.2.0-20) ... Selecting previously unselected package zlib1g:armhf. Preparing to unpack .../63-zlib1g_1%3a1.2.11.dfsg-1_armhf.deb ... Unpacking zlib1g:armhf (1:1.2.11.dfsg-1) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../64-zlib1g-dev_1%3a1.2.11.dfsg-1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Selecting previously unselected package sbuild-build-depends-kmc-dummy:armhf. Preparing to unpack .../65-sbuild-build-depends-kmc-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-kmc-dummy:armhf (0.invalid.0) ... Setting up readline-common (7.0-5) ... Setting up ruby-xmlrpc (0.3.0-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libelf1:amd64 (0.175-2) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armhf (4.19.16-1) ... Setting up d-shlibs (0.84) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up ruby-did-you-mean (1.2.1-1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libssl1.1:amd64 (1.1.1a-1) ... Setting up gcc-8-base:armhf (8.2.0-20) ... Setting up help2man (1.47.8) ... Setting up openssl (1.1.1a-1) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up ruby-minitest (5.11.3-1) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up libncurses6:amd64 (6.1+20181013-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up ruby-power-assert (1.1.1-1) ... Setting up libfile-stripnondeterminism-perl (1.1.0-1) ... Setting up libtool (2.4.6-9) ... Setting up ruby-test-unit (3.2.8-1) ... Setting up gettext (0.19.8.1-9) ... Setting up groff-base (1.22.4-2) ... Setting up autoconf (2.69-11) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up rubygems-integration (1.11) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up po-debconf (1.0.21) ... Setting up libc6:armhf (2.28-7) ... Setting up libbz2-1.0:armhf (1.0.6-9) ... Setting up libc6-dev:armhf (2.28-7) ... Setting up libgcc1:armhf (1:8.2.0-20) ... Setting up libgomp1:armhf (8.2.0-20) ... Setting up libatomic1:armhf (8.2.0-20) ... Setting up libruby2.5:amd64 (2.5.3-3) ... Setting up libbz2-dev:armhf (1.0.6-9) ... Setting up dh-autoreconf (19) ... Setting up zlib1g:armhf (1:1.2.11.dfsg-1) ... Setting up libstdc++6:armhf (8.2.0-20) ... Setting up libasan5:armhf (8.2.0-20) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Setting up libubsan1:armhf (8.2.0-20) ... Setting up debhelper (12.1) ... Setting up ruby2.5 (2.5.3-3) ... Setting up dh-strip-nondeterminism (1.1.0-1) ... Setting up dh-exec (0.23.1) ... Setting up libgcc-8-dev:armhf (8.2.0-20) ... Setting up ruby (1:2.5.1) ... Setting up libstdc++-8-dev:armhf (8.2.0-20) ... Setting up rake (12.3.1-3) ... Setting up ruby-asciidoctor (1.5.8-1) ... Setting up asciidoctor (1.5.8-1) ... Setting up sbuild-build-depends-kmc-dummy:armhf (0.invalid.0) ... Processing triggers for libc-bin (2.28-7) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-12 dpkg-dev_1.19.4 g++-8_8.2.0-20 gcc-8_8.2.0-20 libc6-dev_2.28-7 libstdc++-8-dev_8.2.0-20 libstdc++-8-dev-armhf-cross_8.2.0-20cross1 libstdc++6_8.2.0-20 libstdc++6-armhf-cross_8.2.0-20cross1 linux-libc-dev_4.19.16-1 Package versions: adduser_3.118 apt_1.8.0~rc3 asciidoctor_1.5.8-1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-12 binutils-arm-linux-gnueabihf_2.31.1-12 binutils-common_2.31.1-12 binutils-x86-64-linux-gnu_2.31.1-12 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20190110 coreutils_8.30-1 cpp_4:8.2.0-2 cpp-8_8.2.0-20 cpp-8-arm-linux-gnueabihf_8.2.0-20cross1 cpp-arm-linux-gnueabihf_4:8.2.0-2 cross-config_2.6.15-2 crossbuild-essential-armhf_12.5 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.70 debhelper_12.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-exec_0.23.1 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dpkg_1.19.4 dpkg-cross_2.6.15-2 dpkg-dev_1.19.4 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 g++_4:8.2.0-2 g++-8_8.2.0-20 g++-8-arm-linux-gnueabihf_8.2.0-20cross1 g++-arm-linux-gnueabihf_4:8.2.0-2 gcc_4:8.2.0-2 gcc-8_8.2.0-20 gcc-8-arm-linux-gnueabihf_8.2.0-20cross1 gcc-8-arm-linux-gnueabihf-base_8.2.0-20cross1 gcc-8-base_8.2.0-20 gcc-8-cross-base_8.2.0-20cross1 gcc-arm-linux-gnueabihf_4:8.2.0-2 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.12-1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 help2man_1.47.8 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-3+b1 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libasan5_8.2.0-20 libasan5-armhf-cross_8.2.0-20cross1 libatomic1_8.2.0-20 libatomic1-armhf-cross_8.2.0-20cross1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-12 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-7 libc-dev-bin_2.28-7 libc6_2.28-7 libc6-armhf-cross_2.28-4cross1 libc6-dev_2.28-7 libc6-dev-armhf-cross_2.28-4cross1 libcap-ng0_0.7.9-2 libcc1-0_8.2.0-20 libcom-err2_1.44.5-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.3 libdebconfclient0_0.247 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.4 libelf1_0.175-2 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.0-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.2.0-20 libgcc-8-dev-armhf-cross_8.2.0-20cross1 libgcc1_1:8.2.0-20 libgcc1-armhf-cross_1:8.2.0-20cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-2 libgdbm6_1.18.1-2 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-20 libgomp1-armhf-cross_8.2.0-20cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.2.0-20 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.2.0-20 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.2.0-20 libncurses6_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam0g_1.1.8-4 libpcre3_2:8.39-11 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libquadmath0_8.2.0-20 libreadline7_7.0-5 libruby2.5_2.5.3-3 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.44.5-1 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-20 libstdc++-8-dev-armhf-cross_8.2.0-20cross1 libstdc++6_8.2.0-20 libstdc++6-armhf-cross_8.2.0-20cross1 libsystemd0_240-5 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-1 libtool_2.4.6-9 libtsan0_8.2.0-20 libubsan1_8.2.0-20 libubsan1-armhf-cross_8.2.0-20cross1 libuchardet0_0.0.6-3 libudev1_240-5 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0133+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-0-2_0.2.1-1 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.16-1 linux-libc-dev-armhf-cross_4.19.13-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 po-debconf_1.0.21 rake_12.3.1-3 readline-common_7.0-5 ruby_1:2.5.1 ruby-asciidoctor_1.5.8-1 ruby-did-you-mean_1.2.1-1 ruby-minitest_5.11.3-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.1-1 ruby-test-unit_3.2.8-1 ruby-xmlrpc_0.3.0-2 ruby2.5_2.5.3-3 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-kmc-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-6 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 26 20:37:02 2018 UTC gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kmc_2.3+dfsg-7.dsc dpkg-source: info: extracting kmc in /<>/kmc-2.3+dfsg dpkg-source: info: unpacking kmc_2.3+dfsg.orig.tar.gz dpkg-source: info: unpacking kmc_2.3+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying disable-asmlib dpkg-source: info: applying use-shared-libs dpkg-source: info: applying hardening dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch dpkg-source: info: applying 0007-Use-standard-compiler-environment-variables.patch dpkg-source: info: applying spelling dpkg-source: info: applying newish_gcc_build_fix.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-ac6226c5-4de2-4bb1-9648-580a35e62c49 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package kmc dpkg-buildpackage: info: source version 2.3+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/kmc-2.3+dfsg' rm -rf /<>/kmc-2.3+dfsg/debian/man_src/*.html /<>/kmc-2.3+dfsg/debian/man_src/*.? rm -rf /<>/kmc-2.3+dfsg/debian/man dh_auto_clean -- make -j1 clean make[2]: Entering directory '/<>/kmc-2.3+dfsg' makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule rm kmer_counter/*.o rm: cannot remove 'kmer_counter/*.o': No such file or directory make[2]: [makefile:80: clean] Error 1 (ignored) rm kmc_api/*.o rm: cannot remove 'kmc_api/*.o': No such file or directory make[2]: [makefile:81: clean] Error 1 (ignored) rm kmc_dump/*.o rm: cannot remove 'kmc_dump/*.o': No such file or directory make[2]: [makefile:82: clean] Error 1 (ignored) rm kmc_tools/*.o rm: cannot remove 'kmc_tools/*.o': No such file or directory make[2]: [makefile:83: clean] Error 1 (ignored) rm -rf bin rm -f libkmc.a make[2]: Leaving directory '/<>/kmc-2.3+dfsg' make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars debian/files rm -fr -- debian/kmc/ debian/tmp/ debian/libkmc-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc make[1]: Entering directory '/<>/kmc-2.3+dfsg' makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer_counter.cpp -o kmer_counter/kmer_counter.o kmer_counter/kmer_counter.cpp: In function 'int main(int, char**)': kmer_counter/kmer_counter.cpp:473:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ kmer_counter/kmer_counter.cpp:475:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' cout << " Total no. of super-k-mers : " << setw(12) << n_total_super_kmers << "\n"; ^~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)> >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:61, from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Distance = int; _Tp = std::pair; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)> >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:60, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kmc.h:15, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair, std::allocator >, long long unsigned int> >; _KeyOfValue = std::_Select1st, std::allocator >, long long unsigned int> > >; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:61, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kmc.h:15, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CBinDesc::read(int32, CMemDiskFile*&, std::__cxx11::string&, uint64&, uint64&, uint64&, uint32&, uint32&)': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CBinDesc::read(int32, CMemDiskFile*&, std::__cxx11::string&, uint64&, uint64&, uint64&, uint64&)': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = std::tuple, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int>; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CBinDesc::insert(int32, CMemDiskFile*, std::__cxx11::string, int64, uint64, uint64, uint64, uint32, uint32)': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, std::vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter&, const std::pair&)> >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinDesc::init_random()': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<5>; unsigned int SIZE = 5; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<6>; unsigned int SIZE = 6; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<7>; unsigned int SIZE = 7; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<8>; unsigned int SIZE = 8; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<6>; unsigned int SIZE = 6; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<7>; unsigned int SIZE = 7; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<8>; unsigned int SIZE = 8; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<5>; unsigned int SIZE = 5; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<4>; unsigned int SIZE = 4; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<4>; unsigned int SIZE = 4; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<8>; unsigned int SIZE = 8; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<7>; unsigned int SIZE = 7; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<6>; unsigned int SIZE = 6; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<5>; unsigned int SIZE = 5; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<8>; unsigned int SIZE = 8; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<7>; unsigned int SIZE = 7; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<6>; unsigned int SIZE = 6; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<5>; unsigned int SIZE = 5; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:61, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kmc.h:15, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CBigBinDesc::push(int32, int32, uint32, uint32, FILE*, std::__cxx11::string, uint64)': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<3>; unsigned int SIZE = 3; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<4>; unsigned int SIZE = 4; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<3>; unsigned int SIZE = 3; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<4>; unsigned int SIZE = 4; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<2>; unsigned int SIZE = 2; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<3>; unsigned int SIZE = 3; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<2>; unsigned int SIZE = 2; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<3>; unsigned int SIZE = 3; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmerQuake<1>; unsigned int SIZE = 1; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<2>; unsigned int SIZE = 2; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmer_counter/kmer_counter.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CKMC::SetThreads1Stage() [with KMER_T = CKmer<1>; unsigned int SIZE = 1; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/ext/algorithm:61, from kmer_counter/defs.h:125, from kmer_counter/kmc.h:14, from kmer_counter/kmer_counter.cpp:18: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<2>; unsigned int SIZE = 2; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmerQuake<1>; unsigned int SIZE = 1; bool QUAKE_MODE = true]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In member function 'bool CKMC::Process() [with KMER_T = CKmer<1>; unsigned int SIZE = 1; bool QUAKE_MODE = false]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mmer.cpp -o kmer_counter/mmer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mem_disk_file.cpp -o kmer_counter/mem_disk_file.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/rev_byte.cpp -o kmer_counter/rev_byte.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_writer.cpp -o kmer_counter/bkb_writer.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:60, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/bkb_writer.h:14, from kmer_counter/bkb_writer.cpp:12: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair, std::allocator >, long long unsigned int> >; _KeyOfValue = std::_Select1st, std::allocator >, long long unsigned int> > >; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:61, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/bkb_writer.h:14, from kmer_counter/bkb_writer.cpp:12: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CBigKmerBinWriter::Process()': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long unsigned int> >, std::_Select1st, std::allocator >, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_reader.cpp -o kmer_counter/bkb_reader.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/fastq_reader.cpp -o kmer_counter/fastq_reader.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/timer.cpp -o kmer_counter/timer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/radix.cpp -o kmer_counter/radix.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_completer.cpp -o kmer_counter/kb_completer.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:60, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kb_completer.h:14, from kmer_counter/kb_completer.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:61, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kb_completer.h:14, from kmer_counter/kb_completer.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'void CKmerBinCompleter::ProcessBinsFirstStage()': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_storer.cpp -o kmer_counter/kb_storer.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:60, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kb_storer.h:15, from kmer_counter/kb_storer.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >; _KeyOfValue = std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >; _Compare = std::less; _Alloc = std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/map:61, from kmer_counter/queues.h:20, from kmer_counter/params.h:15, from kmer_counter/kb_storer.h:15, from kmer_counter/kb_storer.cpp:14: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h: In member function 'bool CKmerBinStorer::OpenFiles()': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> >, std::_Select1st, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >, std::less, std::allocator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, std::allocator >, long long int, long long unsigned int, unsigned int, unsigned int, CMemDiskFile*, long long unsigned int, long long unsigned int> > >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer.cpp -o kmer_counter/kmer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/prob_qual.cpp -o kmer_counter/prob_qual.o mkdir -p bin arm-linux-gnueabihf-g++ -o bin/kmc kmer_counter/kmer_counter.o kmer_counter/mmer.o kmer_counter/mem_disk_file.o kmer_counter/rev_byte.o kmer_counter/bkb_writer.o kmer_counter/bkb_reader.o kmer_counter/fastq_reader.o kmer_counter/timer.o kmer_counter/radix.o kmer_counter/kb_completer.o kmer_counter/kb_storer.o kmer_counter/kmer.o kmer_counter/prob_qual.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/mmer.cpp -o kmc_api/mmer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::BinarySearch(int64, int64, const CKmerAPI&, uint64&, uint32)': kmc_api/kmc_file.cpp:1360:18: warning: comparison of integer expressions of different signedness: 'int64' {aka 'long long int'} and 'uint64' {aka 'long long unsigned int'} [-Wsign-compare] if (index_start >= total_kmers) ~~~~~~~~~~~~^~~~~~~~~~~~~~ kmc_api/kmc_file.cpp: In member function 'void CKMCFile::Reload_sufix_file_buf()': kmc_api/kmc_file.cpp:607:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (sufix_file_buf, 1, (size_t) part_size, file_suf); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::RestartListing()': kmc_api/kmc_file.cpp:653:9: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (sufix_file_buf, 1, (size_t) part_size, file_suf); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o mkdir -p bin arm-linux-gnueabihf-g++ -o bin/kmc_dump kmc_dump/nc_utils.o kmc_api/mmer.o kmc_dump/kmc_dump.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_header.cpp -o kmc_tools/kmc_header.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/queue:62, from kmc_tools/queues.h:20, from kmc_tools/config.h:20, from kmc_tools/kmc_tools.cpp:15: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 7]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 1]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 8]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 6]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 5]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 4]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator*, std::vector > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 1]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 8]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 7]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 6]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 3]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 5]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CTools::filter() [with unsigned int SIZE = 2]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/algorithm:62, from /usr/arm-linux-gnueabihf/include/c++/8/regex:38, from kmc_tools/tokenizer.h:16, from kmc_tools/parser.h:15, from kmc_tools/kmc_tools.cpp:16: /usr/arm-linux-gnueabihf/include/c++/8/bits/stl_algo.h:4866:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_comp_iter(__comp)); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/kmc_tools.cpp:13: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 4]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 3]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void CBinBufProvider::init(std::vector >&) [with unsigned int SIZE = 2]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/config.h:16, from kmc_tools/kmc1_db_reader.h:15, from kmc_tools/expression_node.h:19, from kmc_tools/parser.h:14, from kmc_tools/parameters_parser.h:15, from kmc_tools/parameters_parser.cpp:12: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {CKMC_header}; _Tp = CKMC_header; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'bool CParametersParser::validate_input_dbs()': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parser.cpp -o kmc_tools/parser.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o arm-linux-gnueabihf-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o In file included from /usr/arm-linux-gnueabihf/include/c++/8/vector:69, from kmc_tools/percent_progress.h:15, from kmc_tools/percent_progress.cpp:12: /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&, long long unsigned int&}; _Tp = CPercentProgress::CDisplayItem; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'uint32 CPercentProgress::RegisterItem(const string&, uint64)': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, long long unsigned int&}; _Tp = CPercentProgress::CDisplayItem; _Alloc = std::allocator]': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc: In member function 'uint32 CPercentProgress::RegisterItem(uint64)': /usr/arm-linux-gnueabihf/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ mkdir -p bin arm-linux-gnueabihf-g++ -o bin/kmc_tools kmc_tools/kmc_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o ranlib libkmc.a make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars rm -fr -- debian/.debhelper/generated/kmc/ debian/kmc/ debian/tmp/ debian/.debhelper/generated/libkmc-dev/ debian/libkmc-dev/ dh_auto_install -a install -d /<>/kmc-2.3\+dfsg/debian/tmp debian/rules override_dh_install make[1]: Entering directory '/<>/kmc-2.3+dfsg' dh_install install -d debian/kmc/usr/bin cp --reflink=auto -a ./bin/kmc ./bin/kmc_dump ./bin/kmc_tools debian/kmc/usr/bin/ install -d debian/.debhelper/generated/kmc install -d debian/libkmc-dev/usr/include/kmc cp --reflink=auto -a ./kmc_api/kmc_file.h ./kmc_api/kmer_api.h ./kmc_api/kmer_defs.h ./kmc_api/mmer.h ./kmc_api/stdafx.h debian/libkmc-dev/usr/include/kmc/ install -d debian/libkmc-dev/usr/lib/arm-linux-gnueabihf cp --reflink=auto -a ./libkmc.a debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/ install -d debian/.debhelper/generated/libkmc-dev make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_installdocs -a install -d debian/kmc/usr/share/doc/kmc install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright install -d debian/libkmc-dev/usr/share/doc/libkmc-dev install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/kmc/usr/share/doc/kmc/changelog.Debian install -p -m0644 debian/changelog debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>/kmc-2.3+dfsg' mkdir -p /<>/kmc-2.3+dfsg/debian/man /<>/kmc-2.3+dfsg/debian/usage_to_man Can't exec "1": No such file or directory at /<>/kmc-2.3+dfsg/debian/usage_to_man line 19. Creating manpages Manpage creation complete Manpage creation complete asciidoctor -a docdate='' -b manpage /<>/kmc-2.3+dfsg/debian/man_src/*.adoc cp /<>/kmc-2.3+dfsg/debian/man_src/*.? /<>/kmc-2.3+dfsg/debian/man dh_installman -- install -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1 install -p -m0644 ./man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1 install -p -m0644 ./debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 install -p -m0644 ./debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 install -p -m0644 ./debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 install -p -m0644 ./debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 install -p -m0644 ./debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 install -p -m0644 ./debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 install -p -m0644 ./debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 install -p -m0644 ./debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 install -p -m0644 ./debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 install -p -m0644 ./debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 install -p -m0644 ./debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools.1 > debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-union.1 > debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-union.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-sort.1 > debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-sort.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 > debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 > debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-filter.1 > debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-filter.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-dump.1 > debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-dump.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-complex.1 > debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-complex.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-compact.1 > debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-compact.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_dump.1 > debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_dump.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc.1 > debian/kmc/usr/share/man/man1/kmc.1.dh-new mv debian/kmc/usr/share/man/man1/kmc.1.dh-new debian/kmc/usr/share/man/man1/kmc.1 chmod 0644 -- debian/kmc/usr/share/man/man1/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc.1 make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/kmc chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 cd '/<>/kmc-2.3+dfsg' cd debian/libkmc-dev chmod a-x usr/share/doc/libkmc-dev/changelog.Debian gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian cd '/<>/kmc-2.3+dfsg' dh_fixperms -a find debian/kmc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/kmc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/kmc/usr/share/doc -type f -a -true -a ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/kmc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libkmc-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libkmc-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libkmc-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libkmc-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_strip -a install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/2d arm-linux-gnueabihf-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_tools debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/2d/fa793565b5a54db35b10c9e63787f749c5e263.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/2d/fa793565b5a54db35b10c9e63787f749c5e263.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/2d/fa793565b5a54db35b10c9e63787f749c5e263.debug arm-linux-gnueabihf-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_tools arm-linux-gnueabihf-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/2d/fa793565b5a54db35b10c9e63787f749c5e263.debug debian/kmc/usr/bin/kmc_tools install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/fc arm-linux-gnueabihf-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_dump debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/fc/fdb19322e5055328db4a8a272d02b2fed0f2bc.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/fc/fdb19322e5055328db4a8a272d02b2fed0f2bc.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/fc/fdb19322e5055328db4a8a272d02b2fed0f2bc.debug arm-linux-gnueabihf-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_dump arm-linux-gnueabihf-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/fc/fdb19322e5055328db4a8a272d02b2fed0f2bc.debug debian/kmc/usr/bin/kmc_dump install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/40 arm-linux-gnueabihf-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/40/526e776e522a1187fd8dbf5901a4d299d2ce23.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/40/526e776e522a1187fd8dbf5901a4d299d2ce23.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/40/526e776e522a1187fd8dbf5901a4d299d2ce23.debug arm-linux-gnueabihf-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc arm-linux-gnueabihf-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/40/526e776e522a1187fd8dbf5901a4d299d2ce23.debug debian/kmc/usr/bin/kmc install -d debian/.debhelper/kmc/dbgsym-root/usr/share/doc ln -s kmc debian/.debhelper/kmc/dbgsym-root/usr/share/doc/kmc-dbgsym arm-linux-gnueabihf-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libkmc-dev/usr/lib/arm-linux-gnueabihf/libkmc.a dh_makeshlibs -a rm -f debian/kmc/DEBIAN/shlibs rm -f debian/libkmc-dev/DEBIAN/shlibs dh_shlibdeps -a install -d debian/kmc/DEBIAN dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/usr/bin/kmc debian/kmc/usr/bin/kmc_dump debian/kmc/usr/bin/kmc_tools dpkg-shlibdeps: warning: debian/kmc/usr/bin/kmc contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/kmc/usr/bin/kmc_dump contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/kmc/usr/bin/kmc_tools contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -a install -d debian/libkmc-dev/DEBIAN dh_gencontrol -a echo misc:Depends= >> debian/kmc.substvars echo misc:Pre-Depends= >> debian/kmc.substvars install -d debian/.debhelper/kmc/dbgsym-root/DEBIAN dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=debug symbols for kmc" "-DBuild-Ids=2dfa793565b5a54db35b10c9e63787f749c5e263 40526e776e522a1187fd8dbf5901a4d299d2ce23 fcfdb19322e5055328db4a8a272d02b2fed0f2bc" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc -UMulti-Arch chmod 0644 -- debian/kmc/DEBIAN/control chown 0:0 -- debian/kmc/DEBIAN/control echo misc:Depends= >> debian/libkmc-dev.substvars echo misc:Pre-Depends= >> debian/libkmc-dev.substvars dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev -UMulti-Arch dpkg-gencontrol: warning: Depends field of package libkmc-dev: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libkmc-dev/DEBIAN/control chown 0:0 -- debian/libkmc-dev/DEBIAN/control dh_md5sums -a cd debian/kmc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/kmc/DEBIAN/md5sums chown 0:0 -- debian/kmc/DEBIAN/md5sums cd debian/.debhelper/kmc/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums cd debian/libkmc-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libkmc-dev/DEBIAN/md5sums chown 0:0 -- debian/libkmc-dev/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/kmc .. dpkg-deb: building package 'kmc' in '../kmc_2.3+dfsg-7_armhf.deb'. dpkg-deb --build debian/.debhelper/kmc/dbgsym-root .. dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_2.3+dfsg-7_armhf.deb'. dpkg-deb --build debian/libkmc-dev .. dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_2.3+dfsg-7_armhf.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kmc_2.3+dfsg-7_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-02-11T18:47:44Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-ZxCWkl/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-kmc-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-ZxCWkl/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ZxCWkl/apt_archive ./ Sources [789 B] Get:5 copy:/<>/resolver-ZxCWkl/apt_archive ./ Packages [869 B] Fetched 2621 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl liburi-perl libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults t1utils Suggested packages: libdata-dump-perl libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl liburi-perl libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:armhf t1utils 0 upgraded, 41 newly installed, 0 to remove and 0 not upgraded. Need to get 5866 kB of archives. After this operation, 15.6 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ZxCWkl/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.12-1 [509 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.26.0+fossilbc891ac6b-2 [635 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.12-1 [862 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.6.0 [1193 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5866 kB in 0s (33.3 MB/s) Selecting previously unselected package netbase. (Reading database ... 19427 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../02-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../03-gpgconf_2.2.12-1_amd64.deb ... Unpacking gpgconf (2.2.12-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../04-libsqlite3-0_3.26.0+fossilbc891ac6b-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-2) ... Selecting previously unselected package gpg. Preparing to unpack .../05-gpg_2.2.12-1_amd64.deb ... Unpacking gpg (2.2.12-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../06-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../07-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../08-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../09-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../10-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../11-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../12-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../13-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../14-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../15-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../16-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../17-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../18-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../19-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../20-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../21-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../22-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../23-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../24-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../25-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../26-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../27-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../28-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../29-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../30-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../31-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../32-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../33-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../34-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../35-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../36-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../37-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../38-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../39-lintian_2.6.0_all.deb ... Unpacking lintian (2.6.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armhf. Preparing to unpack .../40-sbuild-build-depends-lintian-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libnet-ip-perl (1.26-2) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up libfuture-perl (0.39-1) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up patchutils (0.3.4-2) ... Setting up liburi-perl (1.76-1) ... Setting up t1utils (1.41-3) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libsqlite3-0:amd64 (3.26.0+fossilbc891ac6b-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libio-async-perl (0.72-1) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up diffstat (1.62-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up netbase (5.6) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up gpgconf (2.2.12-1) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up gpg (2.2.12-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.6.0) ... Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-7) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kmc_2.3+dfsg-7_armhf.changes: ----------------------------- Format: 1.8 Date: Mon, 26 Nov 2018 21:22:30 +0100 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Built-For-Profiles: cross nocheck Architecture: armhf Version: 2.3+dfsg-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: kmc - count kmers in genomic sequences libkmc-dev - library to access KMC k-mer count files Closes: 914376 Changes: kmc (2.3+dfsg-7) unstable; urgency=medium . [ Jelmer Vernooij ] * Trim trailing whitespace. * Use secure copyright file specification URI. . [ Sascha Steinbiss ] * Fix install paths. Closes: #914376 * Update my email address in Uploaders. Checksums-Sha1: a02d7038359979772db53ece7a533c812daa4836 9447636 kmc-dbgsym_2.3+dfsg-7_armhf.deb ef6fda0c72ae826149f1d4c991eab8052e16574e 5764 kmc_2.3+dfsg-7_armhf.buildinfo 5bf793be5d62f9349795d07982a9a1b1dd73a86d 469296 kmc_2.3+dfsg-7_armhf.deb c0dd9d1bd7d6819b4d72ed41a10e4a38e2896be9 26256 libkmc-dev_2.3+dfsg-7_armhf.deb Checksums-Sha256: 8434a93a2a3dca6adf5a7c19ce6a61ddf82254a90fe0a7c719161f40c3f26828 9447636 kmc-dbgsym_2.3+dfsg-7_armhf.deb 00e6ddc5113f6642b4cd40d49dd00ea06285fc3a32be570138eb65a17516116d 5764 kmc_2.3+dfsg-7_armhf.buildinfo c23820ba1b5794b70452b05a79f93c9463270ffdea20f99e95c1a1b32e74dfdf 469296 kmc_2.3+dfsg-7_armhf.deb 18d3e0cf5fe6b2ae918a60af3932142b3b1f23c67606e483ecd372c1756f6554 26256 libkmc-dev_2.3+dfsg-7_armhf.deb Files: 9312d119eeea9cd175f8503c1af0e44d 9447636 debug optional kmc-dbgsym_2.3+dfsg-7_armhf.deb 7f71f9fa37d0ddde73483ec648084ce0 5764 science optional kmc_2.3+dfsg-7_armhf.buildinfo 8686a590230ef57ad5a8b6ff6cff635a 469296 science optional kmc_2.3+dfsg-7_armhf.deb a811d28be67aed777002274c1e41ddcd 26256 libdevel optional libkmc-dev_2.3+dfsg-7_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kmc Binary: kmc libkmc-dev Architecture: armhf Version: 2.3+dfsg-7 Checksums-Md5: 9312d119eeea9cd175f8503c1af0e44d 9447636 kmc-dbgsym_2.3+dfsg-7_armhf.deb 8686a590230ef57ad5a8b6ff6cff635a 469296 kmc_2.3+dfsg-7_armhf.deb a811d28be67aed777002274c1e41ddcd 26256 libkmc-dev_2.3+dfsg-7_armhf.deb Checksums-Sha1: a02d7038359979772db53ece7a533c812daa4836 9447636 kmc-dbgsym_2.3+dfsg-7_armhf.deb 5bf793be5d62f9349795d07982a9a1b1dd73a86d 469296 kmc_2.3+dfsg-7_armhf.deb c0dd9d1bd7d6819b4d72ed41a10e4a38e2896be9 26256 libkmc-dev_2.3+dfsg-7_armhf.deb Checksums-Sha256: 8434a93a2a3dca6adf5a7c19ce6a61ddf82254a90fe0a7c719161f40c3f26828 9447636 kmc-dbgsym_2.3+dfsg-7_armhf.deb c23820ba1b5794b70452b05a79f93c9463270ffdea20f99e95c1a1b32e74dfdf 469296 kmc_2.3+dfsg-7_armhf.deb 18d3e0cf5fe6b2ae918a60af3932142b3b1f23c67606e483ecd372c1756f6554 26256 libkmc-dev_2.3+dfsg-7_armhf.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 11 Feb 2019 18:47:44 +0000 Build-Path: /<>/kmc-2.3+dfsg Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.0~rc3), asciidoctor (= 1.5.8-1), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-12), binutils-common (= 2.31.1-12), binutils-x86-64-linux-gnu (= 2.31.1-12), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.5), bzip2 (= 1.0.6-9), ca-certificates (= 20190110), coreutils (= 8.30-1), cpp (= 4:8.2.0-2), cpp-8 (= 8.2.0-20), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.70), debhelper (= 12.1), debian-archive-keyring (= 2018.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-exec (= 0.23.1), dh-strip-nondeterminism (= 1.1.0-1), diffutils (= 1:3.6-1), dpkg (= 1.19.4), dpkg-dev (= 1.19.4), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-2), findutils (= 4.6.0+git+20190105-2), g++ (= 4:8.2.0-2), g++-8 (= 8.2.0-20), gcc (= 4:8.2.0-2), gcc-8 (= 8.2.0-20), gcc-8-base (= 8.2.0-20), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.12-1), grep (= 3.3-1), groff-base (= 1.22.4-2), gzip (= 1.9-3), help2man (= 1.47.8), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.52-3+b1), libapt-pkg5.0 (= 1.8.0~rc3), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.2.0-20), libatomic1 (= 8.2.0-20), libattr1 (= 1:2.4.47-2+b2), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-12), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-1), libbz2-1.0 (= 1.0.6-9), libbz2-dev (= 1.0.6-9), libc-bin (= 2.28-7), libc-dev-bin (= 2.28-7), libc6 (= 2.28-7), libc6-dev (= 2.28-7), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.2.0-20), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.3), libdebconfclient0 (= 0.247), libdpkg-perl (= 1.19.4), libelf1 (= 0.175-2), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.0-1), libgcc-8-dev (= 8.2.0-20), libgcc1 (= 1:8.2.0-20), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-2), libgdbm6 (= 1.18.1-2), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.6-2), libgomp1 (= 8.2.0-20), libgpg-error0 (= 1.35-1), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.2.0-20), liblocale-gettext-perl (= 1.07-3+b4), liblsan0 (= 8.2.0-20), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-2), libmagic1 (= 1:5.35-2), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.2.0-20), libncurses6 (= 6.1+20181013-1), libncursesw6 (= 6.1+20181013-1), libnettle6 (= 3.4.1-1), libp11-kit0 (= 0.23.14-2), libpam-modules (= 1.1.8-4), libpam-modules-bin (= 1.1.8-4), libpam-runtime (= 1.1.8-4), libpam0g (= 1.1.8-4), libpcre3 (= 2:8.39-11), libperl5.28 (= 5.28.1-4), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.2.0-20), libreadline7 (= 7.0-5), libruby2.5 (= 2.5.3-3), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssl1.1 (= 1.1.1a-1), libstdc++-8-dev (= 8.2.0-20), libstdc++6 (= 8.2.0-20), libsystemd0 (= 240-5), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-1), libtool (= 2.4.6-9), libtsan0 (= 8.2.0-20), libubsan1 (= 8.2.0-20), libuchardet0 (= 0.0.6-3), libudev1 (= 240-5), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libyaml-0-2 (= 0.2.1-1), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.16-1), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-1), ncurses-bin (= 6.1+20181013-1), openssl (= 1.1.1a-1), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-4), perl-base (= 5.28.1-4), perl-modules-5.28 (= 5.28.1-4), po-debconf (= 1.0.21), rake (= 12.3.1-3), readline-common (= 7.0-5), ruby (= 1:2.5.1), ruby-asciidoctor (= 1.5.8-1), ruby-did-you-mean (= 1.2.1-1), ruby-minitest (= 5.11.3-1), ruby-net-telnet (= 0.1.1-2), ruby-power-assert (= 1.1.1-1), ruby-test-unit (= 3.2.8-1), ruby-xmlrpc (= 0.3.0-2), ruby2.5 (= 2.5.3-3), rubygems-integration (= 1.11), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-6), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1543263750" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kmc-dbgsym_2.3+dfsg-7_armhf.deb ------------------------------- new Debian package, version 2.0. size 9447636 bytes: control archive=652 bytes. 443 bytes, 12 lines control 318 bytes, 3 lines md5sums Package: kmc-dbgsym Source: kmc Version: 2.3+dfsg-7 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 9828 Depends: kmc (= 2.3+dfsg-7) Section: debug Priority: optional Description: debug symbols for kmc Build-Ids: 2dfa793565b5a54db35b10c9e63787f749c5e263 40526e776e522a1187fd8dbf5901a4d299d2ce23 fcfdb19322e5055328db4a8a272d02b2fed0f2bc drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/2d/ -rw-r--r-- root/root 4333836 2018-11-26 20:22 ./usr/lib/debug/.build-id/2d/fa793565b5a54db35b10c9e63787f749c5e263.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/40/ -rw-r--r-- root/root 5510840 2018-11-26 20:22 ./usr/lib/debug/.build-id/40/526e776e522a1187fd8dbf5901a4d299d2ce23.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/fc/ -rw-r--r-- root/root 205008 2018-11-26 20:22 ./usr/lib/debug/.build-id/fc/fdb19322e5055328db4a8a272d02b2fed0f2bc.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-11-26 20:22 ./usr/share/doc/kmc-dbgsym -> kmc kmc_2.3+dfsg-7_armhf.deb ------------------------ new Debian package, version 2.0. size 469296 bytes: control archive=1692 bytes. 1608 bytes, 31 lines control 1252 bytes, 18 lines md5sums Package: kmc Version: 2.3+dfsg-7 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 1466 Depends: libbz2-1.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libgomp1 (>= 4.9), libstdc++6 (>= 6), zlib1g (>= 1:1.2.6) Section: science Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: count kmers in genomic sequences The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . Building de Bruijn graphs is a commonly used approach for genome assembly with data from second-generation sequencing. Unfortunately, sequencing errors (frequent in practice) result in huge memory requirements for de Bruijn graphs, as well as long build time. One of the popular approaches to handle this problem is filtering the input reads in such a way that unique k-mers (very likely obtained as a result of an error) are discarded. . Thus, KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows one to use KMC even on rather typical personal computers. When run on high-end servers (what is necessary for KMC competitors) it outperforms them in both memory requirements and speed of computation. The disk space necessary for computation is in order of the size of input data (usually it is smaller). drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/bin/ -rwxr-xr-x root/root 961636 2018-11-26 20:22 ./usr/bin/kmc -rwxr-xr-x root/root 34568 2018-11-26 20:22 ./usr/bin/kmc_dump -rwxr-xr-x root/root 473412 2018-11-26 20:22 ./usr/bin/kmc_tools drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/kmc/ -rw-r--r-- root/root 1084 2018-11-26 20:22 ./usr/share/doc/kmc/changelog.Debian.gz -rw-r--r-- root/root 1211 2018-11-26 20:21 ./usr/share/doc/kmc/copyright drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/man/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/man/man1/ -rw-r--r-- root/root 386 2018-11-26 20:22 ./usr/share/man/man1/kmc.1.gz -rw-r--r-- root/root 397 2018-11-26 20:22 ./usr/share/man/man1/kmc_dump.1.gz -rw-r--r-- root/root 832 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-compact.1.gz -rw-r--r-- root/root 1313 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-complex.1.gz -rw-r--r-- root/root 1009 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz -rw-r--r-- root/root 858 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-dump.1.gz -rw-r--r-- root/root 1025 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-filter.1.gz -rw-r--r-- root/root 822 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-histogram.1.gz -rw-r--r-- root/root 966 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-intersect.1.gz -rw-r--r-- root/root 970 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz -rw-r--r-- root/root 877 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-sort.1.gz -rw-r--r-- root/root 951 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-union.1.gz -rw-r--r-- root/root 1206 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools.1.gz libkmc-dev_2.3+dfsg-7_armhf.deb ------------------------------- new Debian package, version 2.0. size 26256 bytes: control archive=944 bytes. 614 bytes, 17 lines control 519 bytes, 8 lines md5sums Package: libkmc-dev Source: kmc Version: 2.3+dfsg-7 Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 84 Section: libdevel Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: library to access KMC k-mer count files The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . This package contains the C++ library headers for accessing kmc's output file format. drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/include/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/include/kmc/ -rw-r--r-- root/root 5781 2015-09-10 15:25 ./usr/include/kmc/kmc_file.h -rw-r--r-- root/root 18341 2015-09-10 15:25 ./usr/include/kmc/kmer_api.h -rw-r--r-- root/root 1022 2015-09-10 15:25 ./usr/include/kmc/kmer_defs.h -rw-r--r-- root/root 4163 2015-09-10 15:25 ./usr/include/kmc/mmer.h -rw-r--r-- root/root 85 2015-09-10 15:25 ./usr/include/kmc/stdafx.h drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/arm-linux-gnueabihf/ -rw-r--r-- root/root 39922 2018-11-26 20:22 ./usr/lib/arm-linux-gnueabihf/libkmc.a drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/libkmc-dev/ -rw-r--r-- root/root 1084 2018-11-26 20:22 ./usr/share/doc/libkmc-dev/changelog.Debian.gz -rw-r--r-- root/root 1211 2018-11-26 20:21 ./usr/share/doc/libkmc-dev/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 107296 Build-Time: 217 Distribution: unstable Foreign Architectures: armhf Host Architecture: armhf Install-Time: 25 Job: kmc_2.3+dfsg-7 Lintian: pass Machine Architecture: amd64 Package: kmc Package-Time: 253 Source-Version: 2.3+dfsg-7 Space: 107296 Status: successful Version: 2.3+dfsg-7 -------------------------------------------------------------------------------- Finished at 2019-02-11T18:47:44Z Build needed 00:04:13, 107296k disk space