sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kmc 2.3+dfsg-7 (mips) Fri, 22 Mar 2019 00:28:53 +0000 | +==============================================================================+ Package: kmc Version: 2.3+dfsg-7 Source Version: 2.3+dfsg-7 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-a241dc05-fe98-4876-aa18-b06d109a684d' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-0210.00.pdiff [12.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-1409.56.pdiff [4068 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-2011.21.pdiff [7307 B] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-2011.21.pdiff [7307 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-0210.00.pdiff [4371 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-1409.56.pdiff [16.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-2011.21.pdiff [2657 B] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-2011.21.pdiff [2657 B] Get:10 http://debian.oregonstate.edu/debian unstable/main mips Packages [7977 kB] Fetched 8322 kB in 2s (4742 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kmc.git Please use: git clone https://salsa.debian.org/med-team/kmc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 163 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (dsc) [2158 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (tar) [129 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kmc 2.3+dfsg-7 (diff) [31.6 kB] Fetched 163 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kmc-YiZPDB/kmc-2.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-YiZPDB' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-7jqssA/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-7jqssA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7jqssA/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-7jqssA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7jqssA/apt_archive ./ Sources [360 B] Get:5 copy:/<>/resolver-7jqssA/apt_archive ./ Packages [450 B] Fetched 1767 B in 0s (95.0 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mips-linux-gnu gcc-8-doc libstdc++6-8-dbg-mips-cross gcc-8-multilib-mips-linux-gnu libgcc1-dbg-mips-cross libgomp1-dbg-mips-cross libitm1-dbg-mips-cross libatomic1-dbg-mips-cross libasan5-dbg-mips-cross liblsan0-dbg-mips-cross libtsan0-dbg-mips-cross libubsan1-dbg-mips-cross libmpx2-dbg-mips-cross libquadmath0-dbg-mips-cross manpages-dev autoconf automake libtool flex bison gdb-mips-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mips-linux-gnu cpp-8-mips-linux-gnu cpp-mips-linux-gnu cross-config crossbuild-essential-mips dpkg-cross file g++-8-mips-linux-gnu g++-mips-linux-gnu gcc-8-cross-base gcc-8-mips-linux-gnu gcc-8-mips-linux-gnu-base gcc-mips-linux-gnu libatomic1-mips-cross libc6-dev-mips-cross libc6-mips-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mips-cross libgcc1-mips-cross libgomp1-mips-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mips-cross libstdc++6-mips-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mips-cross sbuild-build-depends-core-dummy:mips sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-7jqssA/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [868 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips-linux-gnu amd64 2.31.1-15 [2489 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu-base amd64 8.3.0-2cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mips-linux-gnu amd64 8.3.0-2cross1 [6281 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-2cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips-cross all 2.28-7cross1 [1215 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips-cross all 1:8.3.0-2cross1 [45.5 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips-cross all 8.3.0-2cross1 [68.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips-cross all 8.3.0-2cross1 [6624 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mips-cross all 8.3.0-2cross1 [208 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mips-linux-gnu amd64 8.3.0-2cross1 [6689 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips-cross all 8.3.0-2cross1 [304 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips-cross all 4.19.20-1cross1 [1223 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips-cross all 2.28-7cross1 [2290 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mips-cross all 8.3.0-2cross1 [1519 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mips-linux-gnu amd64 8.3.0-2cross1 [6856 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips all 12.6 [6560 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (64.6 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11931 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-mips-linux-gnu. Preparing to unpack .../06-binutils-mips-linux-gnu_2.31.1-15_amd64.deb ... Unpacking binutils-mips-linux-gnu (2.31.1-15) ... Selecting previously unselected package gcc-8-mips-linux-gnu-base:amd64. Preparing to unpack .../07-gcc-8-mips-linux-gnu-base_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-mips-linux-gnu-base:amd64 (8.3.0-2cross1) ... Selecting previously unselected package cpp-8-mips-linux-gnu. Preparing to unpack .../08-cpp-8-mips-linux-gnu_8.3.0-2cross1_amd64.deb ... Unpacking cpp-8-mips-linux-gnu (8.3.0-2cross1) ... Selecting previously unselected package cpp-mips-linux-gnu. Preparing to unpack .../09-cpp-mips-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking cpp-mips-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... Selecting previously unselected package gcc-8-cross-base. 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Unpacking libgcc-8-dev-mips-cross (8.3.0-2cross1) ... Selecting previously unselected package gcc-8-mips-linux-gnu. Preparing to unpack .../17-gcc-8-mips-linux-gnu_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-mips-linux-gnu (8.3.0-2cross1) ... Selecting previously unselected package gcc-mips-linux-gnu. Preparing to unpack .../18-gcc-mips-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking gcc-mips-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package libstdc++6-mips-cross. Preparing to unpack .../19-libstdc++6-mips-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++6-mips-cross (8.3.0-2cross1) ... Selecting previously unselected package linux-libc-dev-mips-cross. Preparing to unpack .../20-linux-libc-dev-mips-cross_4.19.20-1cross1_all.deb ... Unpacking linux-libc-dev-mips-cross (4.19.20-1cross1) ... Selecting previously unselected package libc6-dev-mips-cross. Preparing to unpack .../21-libc6-dev-mips-cross_2.28-7cross1_all.deb ... Unpacking libc6-dev-mips-cross (2.28-7cross1) ... Selecting previously unselected package libstdc++-8-dev-mips-cross. Preparing to unpack .../22-libstdc++-8-dev-mips-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++-8-dev-mips-cross (8.3.0-2cross1) ... Selecting previously unselected package g++-8-mips-linux-gnu. Preparing to unpack .../23-g++-8-mips-linux-gnu_8.3.0-2cross1_amd64.deb ... Unpacking g++-8-mips-linux-gnu (8.3.0-2cross1) ... Selecting previously unselected package g++-mips-linux-gnu. Preparing to unpack .../24-g++-mips-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking g++-mips-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../25-libconfig-inifiles-perl_3.000001-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000001-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../26-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... 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Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../33-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../34-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../35-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../36-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../37-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../38-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../39-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-mips. Preparing to unpack .../40-crossbuild-essential-mips_12.6_all.deb ... Unpacking crossbuild-essential-mips (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:mips. Preparing to unpack .../41-sbuild-build-depends-core-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-core-dummy:mips (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up binutils-mips-linux-gnu (2.31.1-15) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-2cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up gcc-8-mips-linux-gnu-base:amd64 (8.3.0-2cross1) ... Setting up cpp-8-mips-linux-gnu (8.3.0-2cross1) ... Setting up libc6-mips-cross (2.28-7cross1) ... Setting up linux-libc-dev-mips-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-mips-linux-gnu (4:8.3.0-1) ... Setting up libc6-dev-mips-cross (2.28-7cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgomp1-mips-cross (8.3.0-2cross1) ... Setting up libgcc1-mips-cross (1:8.3.0-2cross1) ... Setting up libatomic1-mips-cross (8.3.0-2cross1) ... Setting up libgcc-8-dev-mips-cross (8.3.0-2cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up gcc-8-mips-linux-gnu (8.3.0-2cross1) ... Setting up libstdc++6-mips-cross (8.3.0-2cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mips-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-8-dev-mips-cross (8.3.0-2cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-8-mips-linux-gnu (8.3.0-2cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-mips-linux-gnu (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mips (12.6) ... Setting up sbuild-build-depends-core-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-7jqssA/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-7jqssA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7jqssA/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-7jqssA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7jqssA/apt_archive ./ Sources [480 B] Get:5 copy:/<>/resolver-7jqssA/apt_archive ./ Packages [569 B] Fetched 2012 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mips 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-7jqssA/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mips. (Reading database ... 15102 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mips (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs dpkg-deb: building package 'sbuild-build-depends-kmc-dummy' in '/<>/resolver-7jqssA/apt_archive/sbuild-build-depends-kmc-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-kmc-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-7jqssA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7jqssA/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-7jqssA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7jqssA/apt_archive ./ Sources [665 B] Get:5 copy:/<>/resolver-7jqssA/apt_archive ./ Packages [749 B] Fetched 2377 B in 0s (0 B/s) Reading package lists... Reading package lists... Install kmc build dependencies (apt-based resolver) --------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: asciidoctor autoconf automake autopoint autotools-dev bsdmainutils ca-certificates d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips libbsd0 libbz2-1.0:mips libbz2-dev:mips libc6:mips libc6-dev:mips libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libglib2.0-0 libgomp1:mips libncurses6 libpipeline1 libreadline7 libruby2.5 libsigsegv2 libssl1.1 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 libyaml-0-2 linux-libc-dev:mips m4 man-db openssl po-debconf rake readline-common ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5 rubygems-integration zlib1g:mips zlib1g-dev:mips Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips libc-l10n:mips locales:mips manpages-dev:mips libstdc++-8-doc:mips libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl readline-doc ri ruby-dev bundler Recommended packages: curl | wget | lynx bzip2-doc:mips libidn2-0:mips libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl zip fonts-lato libjs-jquery The following NEW packages will be installed: asciidoctor autoconf automake autopoint autotools-dev bsdmainutils ca-certificates d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dwz gcc-8-base:mips gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips libbsd0 libbz2-1.0:mips libbz2-dev:mips libc6:mips libc6-dev:mips libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mips libgcc1:mips libglib2.0-0 libgomp1:mips libncurses6 libpipeline1 libreadline7 libruby2.5 libsigsegv2 libssl1.1 libstdc++-8-dev:mips libstdc++6:mips libtool libuchardet0 libyaml-0-2 linux-libc-dev:mips m4 man-db openssl po-debconf rake readline-common ruby ruby-asciidoctor ruby-did-you-mean ruby-minitest ruby-net-telnet ruby-power-assert ruby-test-unit ruby-xmlrpc ruby2.5 rubygems-integration sbuild-build-depends-kmc-dummy:mips zlib1g:mips zlib1g-dev:mips 0 upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 25.6 MB of archives. After this operation, 105 MB of additional disk space will be used. Get:1 copy:/<>/resolver-7jqssA/apt_archive ./ sbuild-build-depends-kmc-dummy 0.invalid.0 [912 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 1.1.1b-1 [839 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 ca-certificates all 20190110 [157 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 rubygems-integration all 1.11 [4994 B] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 rake all 12.3.1-3 [66.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-did-you-mean all 1.2.1-1 [14.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-minitest all 5.11.3-1 [54.8 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-power-assert all 1.1.1-1 [10.9 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-test-unit all 3.2.8-1 [72.4 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-xmlrpc all 0.3.0-2 [23.7 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libruby2.5 amd64 2.5.3-4 [3431 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 ruby2.5 amd64 2.5.3-4 [393 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 ruby amd64 1:2.5.1 [11.3 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-asciidoctor all 1.5.8-1 [188 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 asciidoctor all 1.5.8-1 [75.8 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 dh-exec amd64 0.23.1 [26.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main mips gcc-8-base mips 8.3.0-3 [190 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.47.8 [177 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main mips libgcc1 mips 1:8.3.0-3 [45.3 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main mips libc6 mips 2.28-8 [2391 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main mips libatomic1 mips 8.3.0-3 [6628 B] Get:55 http://debian.oregonstate.edu/debian unstable/main mips libbz2-1.0 mips 1.0.6-9 [45.1 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main mips linux-libc-dev mips 4.19.28-2 [1152 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main mips libc6-dev mips 2.28-8 [2291 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main mips libbz2-dev mips 1.0.6-9 [31.4 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main mips libgomp1 mips 8.3.0-3 [70.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main mips libgcc-8-dev mips 8.3.0-3 [207 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main mips libstdc++6 mips 8.3.0-3 [342 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main mips libstdc++-8-dev mips 8.3.0-3 [1516 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main mips zlib1g mips 1:1.2.11.dfsg-1 [89.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main mips zlib1g-dev mips 1:1.2.11.dfsg-1 [212 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.6 MB in 0s (59.9 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15102 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../08-libssl1.1_1.1.1b-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1b-1) ... Selecting previously unselected package openssl. Preparing to unpack .../09-openssl_1.1.1b-1_amd64.deb ... Unpacking openssl (1.1.1b-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../10-ca-certificates_20190110_all.deb ... Unpacking ca-certificates (20190110) ... Selecting previously unselected package rubygems-integration. Preparing to unpack .../11-rubygems-integration_1.11_all.deb ... Unpacking rubygems-integration (1.11) ... Selecting previously unselected package rake. Preparing to unpack .../12-rake_12.3.1-3_all.deb ... Unpacking rake (12.3.1-3) ... Selecting previously unselected package ruby-did-you-mean. Preparing to unpack .../13-ruby-did-you-mean_1.2.1-1_all.deb ... Unpacking ruby-did-you-mean (1.2.1-1) ... Selecting previously unselected package ruby-minitest. Preparing to unpack .../14-ruby-minitest_5.11.3-1_all.deb ... Unpacking ruby-minitest (5.11.3-1) ... Selecting previously unselected package ruby-net-telnet. Preparing to unpack .../15-ruby-net-telnet_0.1.1-2_all.deb ... Unpacking ruby-net-telnet (0.1.1-2) ... Selecting previously unselected package ruby-power-assert. Preparing to unpack .../16-ruby-power-assert_1.1.1-1_all.deb ... Unpacking ruby-power-assert (1.1.1-1) ... Selecting previously unselected package ruby-test-unit. Preparing to unpack .../17-ruby-test-unit_3.2.8-1_all.deb ... Unpacking ruby-test-unit (3.2.8-1) ... Selecting previously unselected package ruby-xmlrpc. Preparing to unpack .../18-ruby-xmlrpc_0.3.0-2_all.deb ... Unpacking ruby-xmlrpc (0.3.0-2) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../19-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../20-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../21-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libruby2.5:amd64. Preparing to unpack .../22-libruby2.5_2.5.3-4_amd64.deb ... Unpacking libruby2.5:amd64 (2.5.3-4) ... Selecting previously unselected package ruby2.5. Preparing to unpack .../23-ruby2.5_2.5.3-4_amd64.deb ... Unpacking ruby2.5 (2.5.3-4) ... Selecting previously unselected package ruby. Preparing to unpack .../24-ruby_1%3a2.5.1_amd64.deb ... Unpacking ruby (1:2.5.1) ... Selecting previously unselected package ruby-asciidoctor. 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Selecting previously unselected package autopoint. Preparing to unpack .../32-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../33-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../34-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../35-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../36-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../37-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../38-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../39-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../40-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../41-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../42-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../43-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../44-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../45-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../46-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package dh-exec. Preparing to unpack .../47-dh-exec_0.23.1_amd64.deb ... Unpacking dh-exec (0.23.1) ... Selecting previously unselected package gcc-8-base:mips. Preparing to unpack .../48-gcc-8-base_8.3.0-3_mips.deb ... Unpacking gcc-8-base:mips (8.3.0-3) ... Selecting previously unselected package help2man. Preparing to unpack .../49-help2man_1.47.8_amd64.deb ... Unpacking help2man (1.47.8) ... Selecting previously unselected package libgcc1:mips. Preparing to unpack .../50-libgcc1_1%3a8.3.0-3_mips.deb ... Unpacking libgcc1:mips (1:8.3.0-3) ... 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Preparing to unpack .../63-sbuild-build-depends-kmc-dummy_0.invalid.0_mips.deb ... Unpacking sbuild-build-depends-kmc-dummy:mips (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up ruby-power-assert (1.1.1-1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1b-1) ... Setting up linux-libc-dev:mips (4.19.28-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up help2man (1.47.8) ... Setting up ruby-minitest (5.11.3-1) ... Setting up autotools-dev (20180224.1) ... Setting up ruby-test-unit (3.2.8-1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mips (8.3.0-3) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up ruby-did-you-mean (1.2.1-1) ... Setting up openssl (1.1.1b-1) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up readline-common (7.0-5) ... Setting up ruby-xmlrpc (0.3.0-2) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up rubygems-integration (1.11) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up rake (12.3.1-3) ... Setting up libc6:mips (2.28-8) ... Setting up libc6-dev:mips (2.28-8) ... Setting up libbz2-1.0:mips (1.0.6-9) ... Setting up libbz2-dev:mips (1.0.6-9) ... Setting up libgcc1:mips (1:8.3.0-3) ... Setting up libruby2.5:amd64 (2.5.3-4) ... Setting up zlib1g:mips (1:1.2.11.dfsg-1) ... Setting up libgomp1:mips (8.3.0-3) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:mips (8.3.0-3) ... Setting up libgcc-8-dev:mips (8.3.0-3) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up zlib1g-dev:mips (1:1.2.11.dfsg-1) ... Setting up libstdc++6:mips (8.3.0-3) ... Setting up libstdc++-8-dev:mips (8.3.0-3) ... Setting up ruby2.5 (2.5.3-4) ... Setting up debhelper (12.1.1) ... Setting up dh-exec (0.23.1) ... Setting up ruby (1:2.5.1) ... Setting up ruby-asciidoctor (1.5.8-1) ... Setting up asciidoctor (1.5.8-1) ... Setting up sbuild-build-depends-kmc-dummy:mips (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-15 dpkg-dev_1.19.5 g++-8_8.3.0-3 gcc-8_8.3.0-3 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-mips-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-mips-cross_8.3.0-2cross1 linux-libc-dev_4.19.28-2 Package versions: adduser_3.118 apt_1.8.0 asciidoctor_1.5.8-1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-15 binutils-common_2.31.1-15 binutils-mips-linux-gnu_2.31.1-15 binutils-x86-64-linux-gnu_2.31.1-15 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 ca-certificates_20190110 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-3 cpp-8-mips-linux-gnu_8.3.0-2cross1 cpp-mips-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mips_12.6 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-exec_0.23.1 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dpkg_1.19.5 dpkg-cross_2.6.15-2 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.45.0-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-3 g++-8-mips-linux-gnu_8.3.0-2cross1 g++-mips-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-3 gcc-8-base_8.3.0-3 gcc-8-cross-base_8.3.0-2cross1 gcc-8-mips-linux-gnu_8.3.0-2cross1 gcc-8-mips-linux-gnu-base_8.3.0-2cross1 gcc-mips-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 help2man_1.47.8 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libasan5_8.3.0-3 libatomic1_8.3.0-3 libatomic1-mips-cross_8.3.0-2cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-15 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-8 libc-dev-bin_2.28-8 libc6_2.28-8 libc6-dev_2.28-8 libc6-dev-mips-cross_2.28-7cross1 libc6-mips-cross_2.28-7cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-3 libcom-err2_1.45.0-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.248 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.45.0-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-3 libgcc-8-dev-mips-cross_8.3.0-2cross1 libgcc1_1:8.3.0-3 libgcc1-mips-cross_1:8.3.0-2cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-3 libgomp1_8.3.0-3 libgomp1-mips-cross_8.3.0-2cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-3 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-5 libpipeline1_1.5.1-2 libquadmath0_8.3.0-3 libreadline7_7.0-5 libruby2.5_2.5.3-4 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.0-1 libssl1.1_1.1.1b-1 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-mips-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-mips-cross_8.3.0-2cross1 libsystemd0_241-2 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-3 libubsan1_8.3.0-3 libuchardet0_0.0.6-3 libudev1_241-2 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-0-2_0.2.1-1 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.28-2 linux-libc-dev-mips-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 openssl_1.1.1b-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-5 perl-base_5.28.1-5 perl-modules-5.28_5.28.1-5 po-debconf_1.0.21 rake_12.3.1-3 readline-common_7.0-5 ruby_1:2.5.1 ruby-asciidoctor_1.5.8-1 ruby-did-you-mean_1.2.1-1 ruby-minitest_5.11.3-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.1-1 ruby-test-unit_3.2.8-1 ruby-xmlrpc_0.3.0-2 ruby2.5_2.5.3-4 rubygems-integration_1.11 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-kmc-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-2 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 26 20:37:02 2018 UTC gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kmc_2.3+dfsg-7.dsc dpkg-source: info: extracting kmc in /<>/kmc-2.3+dfsg dpkg-source: info: unpacking kmc_2.3+dfsg.orig.tar.gz dpkg-source: info: unpacking kmc_2.3+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying disable-asmlib dpkg-source: info: applying use-shared-libs dpkg-source: info: applying hardening dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch dpkg-source: info: applying 0007-Use-standard-compiler-environment-variables.patch dpkg-source: info: applying spelling dpkg-source: info: applying newish_gcc_build_fix.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-a241dc05-fe98-4876-aa18-b06d109a684d SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package kmc dpkg-buildpackage: info: source version 2.3+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-architecture: warning: specified GNU system type mips-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/kmc-2.3+dfsg' rm -rf /<>/kmc-2.3+dfsg/debian/man_src/*.html /<>/kmc-2.3+dfsg/debian/man_src/*.? rm -rf /<>/kmc-2.3+dfsg/debian/man dh_auto_clean -- make -j1 clean make[2]: Entering directory '/<>/kmc-2.3+dfsg' makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule rm kmer_counter/*.o rm: cannot remove 'kmer_counter/*.o': No such file or directory make[2]: [makefile:80: clean] Error 1 (ignored) rm kmc_api/*.o rm: cannot remove 'kmc_api/*.o': No such file or directory make[2]: [makefile:81: clean] Error 1 (ignored) rm kmc_dump/*.o rm: cannot remove 'kmc_dump/*.o': No such file or directory make[2]: [makefile:82: clean] Error 1 (ignored) rm kmc_tools/*.o rm: cannot remove 'kmc_tools/*.o': No such file or directory make[2]: [makefile:83: clean] Error 1 (ignored) rm -rf bin rm -f libkmc.a make[2]: Leaving directory '/<>/kmc-2.3+dfsg' make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars debian/files rm -fr -- debian/kmc/ debian/tmp/ debian/libkmc-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips-linux-gnu-pkg-config CXX=mips-linux-gnu-g\+\+ CC=mips-linux-gnu-gcc make[1]: Entering directory '/<>/kmc-2.3+dfsg' makefile:56: target 'kmc_api/mmer.o' given more than once in the same rule mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer_counter.cpp -o kmer_counter/kmer_counter.o kmer_counter/kmer_counter.cpp: In function 'int main(int, char**)': kmer_counter/kmer_counter.cpp:473:1: warning: this 'else' clause does not guard... [-Wmisleading-indentation] else ^~~~ kmer_counter/kmer_counter.cpp:475:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' cout << " Total no. of super-k-mers : " << setw(12) << n_total_super_kmers << "\n"; ^~~~ mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mmer.cpp -o kmer_counter/mmer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/mem_disk_file.cpp -o kmer_counter/mem_disk_file.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/rev_byte.cpp -o kmer_counter/rev_byte.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_writer.cpp -o kmer_counter/bkb_writer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/bkb_reader.cpp -o kmer_counter/bkb_reader.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/fastq_reader.cpp -o kmer_counter/fastq_reader.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/timer.cpp -o kmer_counter/timer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/radix.cpp -o kmer_counter/radix.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_completer.cpp -o kmer_counter/kb_completer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kb_storer.cpp -o kmer_counter/kb_storer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/kmer.cpp -o kmer_counter/kmer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmer_counter/prob_qual.cpp -o kmer_counter/prob_qual.o mkdir -p bin mips-linux-gnu-g++ -o bin/kmc kmer_counter/kmer_counter.o kmer_counter/mmer.o kmer_counter/mem_disk_file.o kmer_counter/rev_byte.o kmer_counter/bkb_writer.o kmer_counter/bkb_reader.o kmer_counter/fastq_reader.o kmer_counter/timer.o kmer_counter/radix.o kmer_counter/kb_completer.o kmer_counter/kb_storer.o kmer_counter/kmer.o kmer_counter/prob_qual.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/mmer.cpp -o kmc_api/mmer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::BinarySearch(int64, int64, const CKmerAPI&, uint64&, uint32)': kmc_api/kmc_file.cpp:1360:18: warning: comparison of integer expressions of different signedness: 'int64' {aka 'long long int'} and 'uint64' {aka 'long long unsigned int'} [-Wsign-compare] if (index_start >= total_kmers) ~~~~~~~~~~~~^~~~~~~~~~~~~~ kmc_api/kmc_file.cpp: In member function 'void CKMCFile::Reload_sufix_file_buf()': kmc_api/kmc_file.cpp:607:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (sufix_file_buf, 1, (size_t) part_size, file_suf); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_api/kmc_file.cpp: In member function 'bool CKMCFile::RestartListing()': kmc_api/kmc_file.cpp:653:9: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result] fread (sufix_file_buf, 1, (size_t) part_size, file_suf); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o mkdir -p bin mips-linux-gnu-g++ -o bin/kmc_dump kmc_dump/nc_utils.o kmc_api/mmer.o kmc_dump/kmc_dump.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_header.cpp -o kmc_tools/kmc_header.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/parser.cpp -o kmc_tools/parser.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o mips-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -DDISABLE_ASMLIB -g -O2 -fdebug-prefix-map=/<>/kmc-2.3+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -fopenmp -std=c++11 -Wall -O3 -fopenmp -std=c++14 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o mkdir -p bin mips-linux-gnu-g++ -o bin/kmc_tools kmc_tools/kmc_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -lz -lbz2 -fopenmp -lpthread ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o ranlib libkmc.a make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars rm -fr -- debian/.debhelper/generated/kmc/ debian/kmc/ debian/tmp/ debian/.debhelper/generated/libkmc-dev/ debian/libkmc-dev/ dh_auto_install -a install -d /<>/kmc-2.3\+dfsg/debian/tmp debian/rules override_dh_install make[1]: Entering directory '/<>/kmc-2.3+dfsg' dh_install install -d debian/kmc/usr/bin cp --reflink=auto -a ./bin/kmc ./bin/kmc_dump ./bin/kmc_tools debian/kmc/usr/bin/ install -d debian/.debhelper/generated/kmc install -d debian/libkmc-dev/usr/include/kmc cp --reflink=auto -a ./kmc_api/kmc_file.h ./kmc_api/kmer_api.h ./kmc_api/kmer_defs.h ./kmc_api/mmer.h ./kmc_api/stdafx.h debian/libkmc-dev/usr/include/kmc/ install -d debian/libkmc-dev/usr/lib/mips-linux-gnu cp --reflink=auto -a ./libkmc.a debian/libkmc-dev/usr/lib/mips-linux-gnu/ install -d debian/.debhelper/generated/libkmc-dev make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_installdocs -a install -d debian/kmc/usr/share/doc/kmc install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright install -d debian/libkmc-dev/usr/share/doc/libkmc-dev install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/kmc/usr/share/doc/kmc/changelog.Debian install -p -m0644 debian/changelog debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>/kmc-2.3+dfsg' mkdir -p /<>/kmc-2.3+dfsg/debian/man /<>/kmc-2.3+dfsg/debian/usage_to_man Can't exec "1": No such file or directory at /<>/kmc-2.3+dfsg/debian/usage_to_man line 19. Creating manpages Manpage creation complete Manpage creation complete asciidoctor -a docdate='' -b manpage /<>/kmc-2.3+dfsg/debian/man_src/*.adoc cp /<>/kmc-2.3+dfsg/debian/man_src/*.? /<>/kmc-2.3+dfsg/debian/man dh_installman -- install -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1 install -p -m0644 ./man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1 install -p -m0644 ./debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 install -p -m0644 ./debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 install -p -m0644 ./debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 install -p -m0644 ./debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 install -p -m0644 ./debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 install -p -m0644 ./debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 install -p -m0644 ./debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 install -p -m0644 ./debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 install -p -m0644 ./debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 install -p -m0644 ./debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 install -p -m0644 ./debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools.1 > debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-union.1 > debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-union.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-sort.1 > debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-sort.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 > debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 > debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-filter.1 > debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-filter.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-dump.1 > debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-dump.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 > debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-complex.1 > debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-complex.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_tools-compact.1 > debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-compact.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc_dump.1 > debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new mv debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_dump.1 man -l --recode UTF-8 ./debian/kmc/usr/share/man/man1/kmc.1 > debian/kmc/usr/share/man/man1/kmc.1.dh-new mv debian/kmc/usr/share/man/man1/kmc.1.dh-new debian/kmc/usr/share/man/man1/kmc.1 chmod 0644 -- debian/kmc/usr/share/man/man1/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc.1 make[1]: Leaving directory '/<>/kmc-2.3+dfsg' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/kmc chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 cd '/<>/kmc-2.3+dfsg' cd debian/libkmc-dev chmod a-x usr/share/doc/libkmc-dev/changelog.Debian gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian cd '/<>/kmc-2.3+dfsg' dh_fixperms -a find debian/kmc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/kmc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/kmc/usr/share/doc -type f -a -true -a ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/kmc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libkmc-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libkmc-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libkmc-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libkmc-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_strip -a install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/35 mips-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_tools debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/35/0dad5f6a5bdb89f9422a9848ca0ff879f34443.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/35/0dad5f6a5bdb89f9422a9848ca0ff879f34443.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/35/0dad5f6a5bdb89f9422a9848ca0ff879f34443.debug mips-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_tools mips-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/35/0dad5f6a5bdb89f9422a9848ca0ff879f34443.debug debian/kmc/usr/bin/kmc_tools install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/24 mips-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_dump debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/24/0ea3c773d220111617a97648da032f8ba498c8.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/24/0ea3c773d220111617a97648da032f8ba498c8.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/24/0ea3c773d220111617a97648da032f8ba498c8.debug mips-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_dump mips-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/24/0ea3c773d220111617a97648da032f8ba498c8.debug debian/kmc/usr/bin/kmc_dump install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/7e mips-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/7e/3d5bb4ee484e7c4d8a5d9012dc308705c1007e.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/7e/3d5bb4ee484e7c4d8a5d9012dc308705c1007e.debug chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/7e/3d5bb4ee484e7c4d8a5d9012dc308705c1007e.debug mips-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc mips-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/7e/3d5bb4ee484e7c4d8a5d9012dc308705c1007e.debug debian/kmc/usr/bin/kmc install -d debian/.debhelper/kmc/dbgsym-root/usr/share/doc ln -s kmc debian/.debhelper/kmc/dbgsym-root/usr/share/doc/kmc-dbgsym mips-linux-gnu-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libkmc-dev/usr/lib/mips-linux-gnu/libkmc.a dh_makeshlibs -a rm -f debian/kmc/DEBIAN/shlibs rm -f debian/libkmc-dev/DEBIAN/shlibs dh_shlibdeps -a install -d debian/kmc/DEBIAN dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/usr/bin/kmc debian/kmc/usr/bin/kmc_dump debian/kmc/usr/bin/kmc_tools dh_installdeb -a install -d debian/libkmc-dev/DEBIAN dh_gencontrol -a echo misc:Depends= >> debian/kmc.substvars echo misc:Pre-Depends= >> debian/kmc.substvars install -d debian/.debhelper/kmc/dbgsym-root/DEBIAN dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=debug symbols for kmc" "-DBuild-Ids=240ea3c773d220111617a97648da032f8ba498c8 350dad5f6a5bdb89f9422a9848ca0ff879f34443 7e3d5bb4ee484e7c4d8a5d9012dc308705c1007e" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc -UMulti-Arch chmod 0644 -- debian/kmc/DEBIAN/control chown 0:0 -- debian/kmc/DEBIAN/control echo misc:Depends= >> debian/libkmc-dev.substvars echo misc:Pre-Depends= >> debian/libkmc-dev.substvars dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev -UMulti-Arch dpkg-gencontrol: warning: Depends field of package libkmc-dev: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libkmc-dev/DEBIAN/control chown 0:0 -- debian/libkmc-dev/DEBIAN/control dh_md5sums -a cd debian/kmc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/kmc/DEBIAN/md5sums chown 0:0 -- debian/kmc/DEBIAN/md5sums cd debian/.debhelper/kmc/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums cd debian/libkmc-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libkmc-dev/DEBIAN/md5sums chown 0:0 -- debian/libkmc-dev/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/kmc .. dpkg-deb: building package 'kmc' in '../kmc_2.3+dfsg-7_mips.deb'. dpkg-deb --build debian/.debhelper/kmc/dbgsym-root .. dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_2.3+dfsg-7_mips.deb'. dpkg-deb --build debian/libkmc-dev .. dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_2.3+dfsg-7_mips.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kmc_2.3+dfsg-7_mips.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-03-22T00:33:22Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-7jqssA/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-kmc-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-7jqssA/apt_archive ./ InRelease Get:2 copy:/<>/resolver-7jqssA/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-7jqssA/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-7jqssA/apt_archive ./ Sources [785 B] Get:5 copy:/<>/resolver-7jqssA/apt_archive ./ Packages [864 B] Fetched 2612 B in 0s (154 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults t1utils Suggested packages: libdata-dump-perl libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults sbuild-build-depends-lintian-dummy:mips t1utils 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 5975 kB of archives. After this operation, 15.9 MB of additional disk space will be used. Get:1 copy:/<>/resolver-7jqssA/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.11.0 [1187 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 5975 kB in 0s (50.9 MB/s) Selecting previously unselected package netbase. (Reading database ... 19662 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package diffstat. Preparing to unpack .../01-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../02-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../03-gpgconf_2.2.13-1_amd64.deb ... Unpacking gpgconf (2.2.13-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../04-libsqlite3-0_3.27.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../05-gpg_2.2.13-1_amd64.deb ... Unpacking gpg (2.2.13-1) ... Selecting previously unselected package libapt-pkg-perl. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kmc_2.3+dfsg-7_mips.changes: ---------------------------- Format: 1.8 Date: Mon, 26 Nov 2018 21:22:30 +0100 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Built-For-Profiles: cross nocheck Architecture: mips Version: 2.3+dfsg-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: kmc - count kmers in genomic sequences libkmc-dev - library to access KMC k-mer count files Closes: 914376 Changes: kmc (2.3+dfsg-7) unstable; urgency=medium . [ Jelmer Vernooij ] * Trim trailing whitespace. * Use secure copyright file specification URI. . [ Sascha Steinbiss ] * Fix install paths. Closes: #914376 * Update my email address in Uploaders. 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34d4866cdb496e1242b6964dfbf740bd8d47448d50bb137f172b1e6f899a6f11 531764 kmc_2.3+dfsg-7_mips.deb 46353dcb040d8e9320986535bd8c6b51daa69ae597e47536b8abdbc446a33774 29484 libkmc-dev_2.3+dfsg-7_mips.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 22 Mar 2019 00:33:21 +0000 Build-Path: /<>/kmc-2.3+dfsg Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.0), asciidoctor (= 1.5.8-1), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-15), binutils-common (= 2.31.1-15), binutils-x86-64-linux-gnu (= 2.31.1-15), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), ca-certificates (= 20190110), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-3), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debian-archive-keyring (= 2018.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-exec (= 0.23.1), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-3), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-3), gcc-8-base (= 8.3.0-3), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.13-1), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), help2man (= 1.47.8), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libapt-pkg5.0 (= 1.8.0), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-3), libatomic1 (= 8.3.0-3), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-15), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libbz2-dev (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-3), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.248), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-3), libgcc1 (= 1:8.3.0-3), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.6-3), libgomp1 (= 8.3.0-3), libgpg-error0 (= 1.35-1), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-3), liblocale-gettext-perl (= 1.07-3+b4), liblsan0 (= 8.3.0-3), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-3), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-5), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-3), libreadline7 (= 7.0-5), libruby2.5 (= 2.5.3-4), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssl1.1 (= 1.1.1b-1), libstdc++-8-dev (= 8.3.0-3), libstdc++6 (= 8.3.0-3), libsystemd0 (= 241-2), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-3), libubsan1 (= 8.3.0-3), libuchardet0 (= 0.0.6-3), libudev1 (= 241-2), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libyaml-0-2 (= 0.2.1-1), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.28-2), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), openssl (= 1.1.1b-1), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-5), perl-base (= 5.28.1-5), perl-modules-5.28 (= 5.28.1-5), po-debconf (= 1.0.21), rake (= 12.3.1-3), readline-common (= 7.0-5), ruby (= 1:2.5.1), ruby-asciidoctor (= 1.5.8-1), ruby-did-you-mean (= 1.2.1-1), ruby-minitest (= 5.11.3-1), ruby-net-telnet (= 0.1.1-2), ruby-power-assert (= 1.1.1-1), ruby-test-unit (= 3.2.8-1), ruby-xmlrpc (= 0.3.0-2), ruby2.5 (= 2.5.3-4), rubygems-integration (= 1.11), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1543263750" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kmc-dbgsym_2.3+dfsg-7_mips.deb ------------------------------ new Debian package, version 2.0. size 10070592 bytes: control archive=652 bytes. 443 bytes, 12 lines control 318 bytes, 3 lines md5sums Package: kmc-dbgsym Source: kmc Version: 2.3+dfsg-7 Auto-Built-Package: debug-symbols Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 10368 Depends: kmc (= 2.3+dfsg-7) Section: debug Priority: optional Description: debug symbols for kmc Build-Ids: 240ea3c773d220111617a97648da032f8ba498c8 350dad5f6a5bdb89f9422a9848ca0ff879f34443 7e3d5bb4ee484e7c4d8a5d9012dc308705c1007e drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/24/ -rw-r--r-- root/root 214664 2018-11-26 20:22 ./usr/lib/debug/.build-id/24/0ea3c773d220111617a97648da032f8ba498c8.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/35/ -rw-r--r-- root/root 4535140 2018-11-26 20:22 ./usr/lib/debug/.build-id/35/0dad5f6a5bdb89f9422a9848ca0ff879f34443.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/debug/.build-id/7e/ -rw-r--r-- root/root 5854000 2018-11-26 20:22 ./usr/lib/debug/.build-id/7e/3d5bb4ee484e7c4d8a5d9012dc308705c1007e.debug drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-11-26 20:22 ./usr/share/doc/kmc-dbgsym -> kmc kmc_2.3+dfsg-7_mips.deb ----------------------- new Debian package, version 2.0. size 531764 bytes: control archive=1696 bytes. 1607 bytes, 31 lines control 1252 bytes, 18 lines md5sums Package: kmc Version: 2.3+dfsg-7 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 2983 Depends: libbz2-1.0, libc6 (>= 2.4), libgcc1 (>= 1:4.2), libgomp1 (>= 4.9), libstdc++6 (>= 6), zlib1g (>= 1:1.2.6) Section: science Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: count kmers in genomic sequences The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . Building de Bruijn graphs is a commonly used approach for genome assembly with data from second-generation sequencing. Unfortunately, sequencing errors (frequent in practice) result in huge memory requirements for de Bruijn graphs, as well as long build time. One of the popular approaches to handle this problem is filtering the input reads in such a way that unique k-mers (very likely obtained as a result of an error) are discarded. . Thus, KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows one to use KMC even on rather typical personal computers. When run on high-end servers (what is necessary for KMC competitors) it outperforms them in both memory requirements and speed of computation. The disk space necessary for computation is in order of the size of input data (usually it is smaller). drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/bin/ -rwxr-xr-x root/root 1911080 2018-11-26 20:22 ./usr/bin/kmc -rwxr-xr-x root/root 57636 2018-11-26 20:22 ./usr/bin/kmc_dump -rwxr-xr-x root/root 1054496 2018-11-26 20:22 ./usr/bin/kmc_tools drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/kmc/ -rw-r--r-- root/root 1084 2018-11-26 20:22 ./usr/share/doc/kmc/changelog.Debian.gz -rw-r--r-- root/root 1211 2018-11-26 20:21 ./usr/share/doc/kmc/copyright drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/man/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/man/man1/ -rw-r--r-- root/root 375 2018-11-26 20:22 ./usr/share/man/man1/kmc.1.gz -rw-r--r-- root/root 387 2018-11-26 20:22 ./usr/share/man/man1/kmc_dump.1.gz -rw-r--r-- root/root 832 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-compact.1.gz -rw-r--r-- root/root 1313 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-complex.1.gz -rw-r--r-- root/root 1009 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz -rw-r--r-- root/root 858 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-dump.1.gz -rw-r--r-- root/root 1025 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-filter.1.gz -rw-r--r-- root/root 822 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-histogram.1.gz -rw-r--r-- root/root 966 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-intersect.1.gz -rw-r--r-- root/root 970 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz -rw-r--r-- root/root 877 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-sort.1.gz -rw-r--r-- root/root 951 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools-union.1.gz -rw-r--r-- root/root 1206 2018-11-26 20:22 ./usr/share/man/man1/kmc_tools.1.gz libkmc-dev_2.3+dfsg-7_mips.deb ------------------------------ new Debian package, version 2.0. size 29484 bytes: control archive=940 bytes. 614 bytes, 17 lines control 514 bytes, 8 lines md5sums Package: libkmc-dev Source: kmc Version: 2.3+dfsg-7 Architecture: mips Maintainer: Debian Med Packaging Team Installed-Size: 104 Section: libdevel Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: library to access KMC k-mer count files The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . This package contains the C++ library headers for accessing kmc's output file format. drwxr-xr-x root/root 0 2018-11-26 20:22 ./ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/include/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/include/kmc/ -rw-r--r-- root/root 5781 2015-09-10 15:25 ./usr/include/kmc/kmc_file.h -rw-r--r-- root/root 18341 2015-09-10 15:25 ./usr/include/kmc/kmer_api.h -rw-r--r-- root/root 1022 2015-09-10 15:25 ./usr/include/kmc/kmer_defs.h -rw-r--r-- root/root 4163 2015-09-10 15:25 ./usr/include/kmc/mmer.h -rw-r--r-- root/root 85 2015-09-10 15:25 ./usr/include/kmc/stdafx.h drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/lib/mips-linux-gnu/ -rw-r--r-- root/root 59654 2018-11-26 20:22 ./usr/lib/mips-linux-gnu/libkmc.a drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-11-26 20:22 ./usr/share/doc/libkmc-dev/ -rw-r--r-- root/root 1084 2018-11-26 20:22 ./usr/share/doc/libkmc-dev/changelog.Debian.gz -rw-r--r-- root/root 1211 2018-11-26 20:21 ./usr/share/doc/libkmc-dev/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 115804 Build-Time: 236 Distribution: unstable Foreign Architectures: mips Host Architecture: mips Install-Time: 24 Job: kmc_2.3+dfsg-7 Lintian: pass Machine Architecture: amd64 Package: kmc Package-Time: 269 Source-Version: 2.3+dfsg-7 Space: 115804 Status: successful Version: 2.3+dfsg-7 -------------------------------------------------------------------------------- Finished at 2019-03-22T00:33:22Z Build needed 00:04:29, 115804k disk space