sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | kmc 3.1.1+dfsg-3 (s390x) Tue, 17 Aug 2021 00:06:13 +0000 | +==============================================================================+ Package: kmc Version: 3.1.1+dfsg-3 Source Version: 3.1.1+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-85daf597-5271-435e-a4de-aea263846bbc' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-sqXKMa/resolver-zpoQQ4' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-08-16-2021.59-F-2021-08-16-0812.47.pdiff [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-08-16-2021.59-F-2021-08-16-0812.47.pdiff [191 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-08-16-2021.59-F-2021-08-16-0812.47.pdiff [238 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-08-16-2021.59-F-2021-08-16-0812.47.pdiff [238 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main s390x Packages [8307 kB] Fetched 9029 kB in 4s (2296 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: gcc-11-base The following packages will be upgraded: binutils binutils-common binutils-x86-64-linux-gnu libasan6 libatomic1 libaudit-common libaudit1 libbinutils libcc1-0 libctf-nobfd0 libctf0 libgcc-s1 libgomp1 libitm1 liblsan0 libquadmath0 libstdc++6 libtsan0 libubsan1 19 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After this operation, 1931 kB of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-base amd64 11.2.0-2 [204 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libaudit-common all 1:3.0.5-1 [15.7 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libaudit1 amd64 1:3.0.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1 amd64 11.2.0-2 [42.0 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6 amd64 11.2.0-2 [576 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libctf0 amd64 2.37-4 [98.0 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libctf-nobfd0 amd64 2.37-4 [155 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils amd64 2.37-4 [61.6 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.37-4 [1857 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libbinutils amd64 2.37-4 [582 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-common amd64 2.37-4 [2177 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6 amd64 11.2.0-2 [2138 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1 amd64 11.2.0-2 [9060 B] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libcc1-0 amd64 11.2.0-2 [47.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1 amd64 11.2.0-2 [106 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1 amd64 11.2.0-2 [26.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0 amd64 11.2.0-2 [888 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0 amd64 11.2.0-2 [144 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0 amd64 11.2.0-2 [2082 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1 amd64 11.2.0-2 [839 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.1 MB in 0s (115 MB/s) Selecting previously unselected package gcc-11-base:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10488 files and directories currently installed.) Preparing to unpack .../gcc-11-base_11.2.0-2_amd64.deb ... Unpacking gcc-11-base:amd64 (11.2.0-2) ... Setting up gcc-11-base:amd64 (11.2.0-2) ... (Reading database ... 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Setting up libctf0:amd64 (2.37-4) ... Setting up binutils-x86-64-linux-gnu (2.37-4) ... Setting up binutils (2.37-4) ... Processing triggers for libc-bin (2.31-13) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kmc.git Please use: git clone https://salsa.debian.org/med-team/kmc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 276 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main kmc 3.1.1+dfsg-3 (dsc) [2238 B] Get:2 http://debian.oregonstate.edu/debian unstable/main kmc 3.1.1+dfsg-3 (tar) [242 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main kmc 3.1.1+dfsg-3 (diff) [32.2 kB] Fetched 276 kB in 0s (3149 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kmc-sqXKMa/kmc-3.1.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-sqXKMa' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [447 B] Get:5 copy:/<>/apt_archive ./ Packages [533 B] Fetched 1937 B in 0s (77.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: asciidoctor autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential ca-certificates cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-11-base:s390x gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbsd0 libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libedit2 libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2:s390x libicu67 libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x liblocale-gettext-perl libmagic-mgc libmagic1 libmd0 libnsl-dev libnsl-dev:s390x libnsl2:s390x libperl5.32 libpipeline1 libruby2.7 libsigsegv2 libsimde-dev libssl1.1:s390x libstdc++-10-dev libstdc++-10-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtirpc-dev libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-0-2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db openssl perl perl-modules-5.32 po-debconf rake ruby ruby-asciidoctor ruby-minitest ruby-net-telnet ruby-power-assert ruby-rubygems ruby-test-unit ruby-xmlrpc ruby2.7 rubygems-integration sensible-utils ucf zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-s390x-linux-gnu gcc-10-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x glibc-doc manpages-dev:s390x gnupg git bzr krb5-doc:s390x krb5-user:s390x libstdc++-10-doc libstdc++-9-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl ri ruby-dev bundler Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx bzip2-doc:s390x libidn2-0:s390x libnss-nis:s390x libnss-nisplus:s390x libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:s390x libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl zip fonts-lato libjs-jquery The following NEW packages will be installed: asciidoctor autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential ca-certificates cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x d-shlibs debhelper dh-autoreconf dh-exec dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-11-base:s390x gcc-9-base:s390x gcc-s390x-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan5:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libbsd0 libbz2-1.0:s390x libbz2-dev:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libedit2 libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev-s390x-cross libgcc-9-dev:s390x libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2:s390x libicu67 libio-string-perl libitm1:s390x libitm1-s390x-cross libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x liblocale-gettext-perl libmagic-mgc libmagic1 libmd0 libnsl-dev libnsl-dev:s390x libnsl2:s390x libperl5.32 libpipeline1 libruby2.7 libsigsegv2 libsimde-dev libssl1.1:s390x libstdc++-10-dev libstdc++-10-dev-s390x-cross libstdc++-9-dev:s390x libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtirpc-dev libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-0-2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db openssl perl perl-modules-5.32 po-debconf rake ruby ruby-asciidoctor ruby-minitest ruby-net-telnet ruby-power-assert ruby-rubygems ruby-test-unit ruby-xmlrpc ruby2.7 rubygems-integration sbuild-build-depends-main-dummy:s390x sensible-utils ucf zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 137 newly installed, 0 to remove and 0 not upgraded. Need to get 211 MB of archives. After this operation, 906 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [964 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-5 [2823 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-5 [4125 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-5 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main s390x gcc-11-base s390x 11.2.0-2 [204 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main s390x gcc-9-base s390x 9.4.0-1 [199 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 1.1.1k-1 [850 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 ca-certificates all 20210119 [158 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 rubygems-integration all 1.18 [6704 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 rake all 13.0.3-1 [84.7 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-minitest all 5.13.0-1 [57.3 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-net-telnet all 0.1.1-2 [12.5 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-power-assert all 1.1.7-2 [11.5 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-test-unit all 3.3.9-1 [86.1 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-xmlrpc all 0.3.0-2 [23.7 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.11.3-1 [108 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libedit2 amd64 3.1-20210714-1 [97.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libruby2.7 amd64 2.7.4-1 [4200 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 ruby2.7 amd64 2.7.4-1 [747 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-rubygems all 3.2.5-2 [281 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 ruby amd64 1:2.7+2 [11.7 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 ruby-asciidoctor all 2.0.12-2 [206 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 asciidoctor all 2.0.12-2 [83.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-14 [313 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.4-1 [819 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.37-4 [2067 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.18-5 [104 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.1-1 [190 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-13 [2344 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.1-6 [1741 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.1-6 [9380 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu-base amd64 10.2.1-6cross1 [202 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-s390x-linux-gnu amd64 10.2.1-6cross1 [41.1 MB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:10.2.1-1 [16.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu1 [31.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.1-6cross1 [197 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.31-9cross4 [1231 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-s390x-cross all 10.2.1-6cross1 [24.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 10.2.1-6cross1 [90.5 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 10.2.1-6cross1 [24.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 10.2.1-6cross1 [7944 B] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-s390x-cross all 10.2.1-6cross1 [1863 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 10.2.1-6cross1 [442 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 10.2.1-6cross1 [747 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-s390x-cross all 10.2.1-6cross1 [663 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu amd64 10.2.1-6cross1 [46.3 MB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:10.2.1-1 [1456 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.10.13-1cross4 [1395 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.31-9cross4 [1943 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-s390x-cross all 10.2.1-6cross1 [1684 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-s390x-linux-gnu amd64 10.2.1-6cross1 [44.2 MB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:10.2.1-1 [1176 B] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.9 [6704 B] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.99 [18.0 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.185-2 [172 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.3.4 [1049 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 dh-exec amd64 0.23.4 [27.1 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 help2man amd64 1.48.4 [143 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-s1 s390x 11.2.0-2 [24.6 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt1 s390x 1:4.4.18-5 [88.0 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.31-13 [2445 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main s390x libasan5 s390x 9.4.0-1 [2557 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 11.2.0-2 [8064 B] Get:113 http://debian.oregonstate.edu/debian unstable/main s390x libbz2-1.0 s390x 1.0.8-4 [45.9 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.10.46-4 [1361 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt-dev s390x 1:4.4.18-5 [105 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main s390x libcom-err2 s390x 1.46.2-2 [74.1 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5support0 s390x 1.18.3-6 [64.3 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main s390x libk5crypto3 s390x 1.18.3-6 [112 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main s390x libkeyutils1 s390x 1.6.1-2 [15.2 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main s390x libssl1.1 s390x 1.1.1k-1 [1213 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5-3 s390x 1.18.3-6 [341 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main s390x libgssapi-krb5-2 s390x 1.18.3-6 [153 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc3 s390x 1.3.1-1 [77.8 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main s390x libnsl2 s390x 1.3.0-2 [37.3 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc-dev s390x 1.3.1-1 [185 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main s390x libnsl-dev s390x 1.3.0-2 [64.6 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.31-13 [1971 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main s390x libbz2-dev s390x 1.0.8-4 [30.2 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 11.2.0-2 [96.7 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 11.2.0-2 [25.2 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 11.2.0-2 [569 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 11.2.0-2 [807 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-9-dev s390x 9.4.0-1 [680 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main amd64 libsimde-dev all 0.7.2-4 [259 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-9-dev s390x 9.4.0-1 [1673 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g s390x 1:1.2.11.dfsg-2 [88.9 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2 [189 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 211 MB in 2s (127 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10495 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.1-5_all.deb ... Unpacking perl-modules-5.32 (5.32.1-5) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.1-5_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-5) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.1-5_amd64.deb ... Unpacking perl (5.32.1-5) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-11-base:s390x. Preparing to unpack .../009-gcc-11-base_11.2.0-2_s390x.deb ... Unpacking gcc-11-base:s390x (11.2.0-2) ... Selecting previously unselected package gcc-9-base:s390x. Preparing to unpack .../010-gcc-9-base_9.4.0-1_s390x.deb ... Unpacking gcc-9-base:s390x (9.4.0-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../012-openssl_1.1.1k-1_amd64.deb ... Unpacking openssl (1.1.1k-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../013-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../014-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../015-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../016-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../017-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../018-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package rubygems-integration. Preparing to unpack .../019-rubygems-integration_1.18_all.deb ... Unpacking rubygems-integration (1.18) ... Selecting previously unselected package rake. Preparing to unpack .../020-rake_13.0.3-1_all.deb ... Unpacking rake (13.0.3-1) ... Selecting previously unselected package ruby-minitest. Preparing to unpack .../021-ruby-minitest_5.13.0-1_all.deb ... Unpacking ruby-minitest (5.13.0-1) ... Selecting previously unselected package ruby-net-telnet. Preparing to unpack .../022-ruby-net-telnet_0.1.1-2_all.deb ... Unpacking ruby-net-telnet (0.1.1-2) ... Selecting previously unselected package ruby-power-assert. Preparing to unpack .../023-ruby-power-assert_1.1.7-2_all.deb ... Unpacking ruby-power-assert (1.1.7-2) ... Selecting previously unselected package ruby-test-unit. Preparing to unpack .../024-ruby-test-unit_3.3.9-1_all.deb ... Unpacking ruby-test-unit (3.3.9-1) ... Selecting previously unselected package ruby-xmlrpc. Preparing to unpack .../025-ruby-xmlrpc_0.3.0-2_all.deb ... Unpacking ruby-xmlrpc (0.3.0-2) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../026-libmd0_1.0.3-3_amd64.deb ... Unpacking libmd0:amd64 (1.0.3-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../027-libbsd0_0.11.3-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../028-libedit2_3.1-20210714-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20210714-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../029-libyaml-0-2_0.2.2-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Selecting previously unselected package libruby2.7:amd64. Preparing to unpack .../030-libruby2.7_2.7.4-1_amd64.deb ... Unpacking libruby2.7:amd64 (2.7.4-1) ... Selecting previously unselected package ruby2.7. Preparing to unpack .../031-ruby2.7_2.7.4-1_amd64.deb ... Unpacking ruby2.7 (2.7.4-1) ... Selecting previously unselected package ruby-rubygems. Preparing to unpack .../032-ruby-rubygems_3.2.5-2_all.deb ... Unpacking ruby-rubygems (3.2.5-2) ... Selecting previously unselected package ruby. Preparing to unpack .../033-ruby_1%3a2.7+2_amd64.deb ... Unpacking ruby (1:2.7+2) ... Selecting previously unselected package ruby-asciidoctor. Preparing to unpack .../034-ruby-asciidoctor_2.0.12-2_all.deb ... Unpacking ruby-asciidoctor (2.0.12-2) ... Selecting previously unselected package asciidoctor. Preparing to unpack .../035-asciidoctor_2.0.12-2_all.deb ... Unpacking asciidoctor (2.0.12-2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../036-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../037-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../038-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../039-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../040-automake_1%3a1.16.4-1_all.deb ... Unpacking automake (1:1.16.4-1) ... Selecting previously unselected package autopoint. Preparing to unpack .../041-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package binutils-s390x-linux-gnu. Preparing to unpack .../042-binutils-s390x-linux-gnu_2.37-4_amd64.deb ... Unpacking binutils-s390x-linux-gnu (2.37-4) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../043-libcrypt-dev_1%3a4.4.18-5_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.18-5) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../044-libtirpc-dev_1.3.1-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.1-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../045-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../046-libc6-dev_2.31-13_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-13) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../047-libstdc++-10-dev_10.2.1-6_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.1-6) ... Selecting previously unselected package g++-10. Preparing to unpack .../048-g++-10_10.2.1-6_amd64.deb ... Unpacking g++-10 (10.2.1-6) ... 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Setting up libc6-s390x-cross (2.31-9cross4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:s390x (5.10.46-4) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up ruby-minitest (5.13.0-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up linux-libc-dev-s390x-cross (5.10.13-1cross4) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libtirpc-dev:amd64 (1.3.1-1) ... Setting up ruby-test-unit (3.3.9-1) ... Setting up ruby-net-telnet (0.1.1-2) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up d-shlibs (0.99) ... Setting up libperl5.32:amd64 (5.32.1-5) ... Setting up gcc-10-cross-base (10.2.1-6cross1) ... Setting up libitm1-s390x-cross (10.2.1-6cross1) ... Setting up libmd0:amd64 (1.0.3-3) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.14) ... Setting up libc6-dev-s390x-cross (2.31-9cross4) ... Setting up libcrypt-dev:amd64 (1:4.4.18-5) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-13) ... Setting up openssl (1.1.1k-1) ... Setting up libbsd0:amd64 (0.11.3-1) ... Setting up libelf1:amd64 (0.185-2) ... Setting up ruby-xmlrpc (0.3.0-2) ... Setting up libgomp1-s390x-cross (10.2.1-6cross1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up gcc-10-s390x-linux-gnu-base:amd64 (10.2.1-6cross1) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up gcc-9-base:s390x (9.4.0-1) ... Setting up gettext (0.21-4) ... Setting up libstdc++-10-dev:amd64 (10.2.1-6) ... Setting up g++-10 (10.2.1-6) ... Setting up libtool (2.4.6-15) ... Setting up libedit2:amd64 (3.1-20210714-1) ... Setting up libatomic1-s390x-cross (10.2.1-6cross1) ... Setting up m4 (1.4.18-5) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up perl (5.32.1-5) ... Setting up libgcc-s1-s390x-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.69-14) ... Setting up g++ (4:10.2.1-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-6) ... Setting up cpp-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.4-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up cpp-s390x-linux-gnu (4:10.2.1-1) ... Setting up libstdc++6-s390x-cross (10.2.1-6cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up rubygems-integration (1.18) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up libasan6-s390x-cross (10.2.1-6cross1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.48.4) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libubsan1-s390x-cross (10.2.1-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-10-dev-s390x-cross (10.2.1-6cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libstdc++-10-dev-s390x-cross (10.2.1-6cross1) ... Setting up debhelper (13.3.4) ... Setting up dh-exec (0.23.4) ... Setting up gcc-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up gcc-s390x-linux-gnu (4:10.2.1-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up g++-s390x-linux-gnu (4:10.2.1-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-s390x (12.9) ... Setting up libcrypt1:s390x (1:4.4.18-5) ... Setting up libgcc-s1:s390x (11.2.0-2) ... Setting up ruby (1:2.7+2) ... Setting up ruby-asciidoctor (2.0.12-2) ... Setting up rake (13.0.3-1) ... Setting up libc6:s390x (2.31-13) ... Setting up asciidoctor (2.0.12-2) ... Setting up libcrypt-dev:s390x (1:4.4.18-5) ... Setting up libbz2-1.0:s390x (1.0.8-4) ... Setting up libstdc++6:s390x (11.2.0-2) ... Setting up libitm1:s390x (11.2.0-2) ... Setting up libkeyutils1:s390x (1.6.1-2) ... Setting up libssl1.1:s390x (1.1.1k-1) ... Setting up zlib1g:s390x (1:1.2.11.dfsg-2) ... Setting up ruby-rubygems (3.2.5-2) ... Setting up libcom-err2:s390x (1.46.2-2) ... Setting up libruby2.7:amd64 (2.7.4-1) ... Setting up libgomp1:s390x (11.2.0-2) ... Setting up libkrb5support0:s390x (1.18.3-6) ... Setting up libasan5:s390x (9.4.0-1) ... Setting up libatomic1:s390x (11.2.0-2) ... Setting up libk5crypto3:s390x (1.18.3-6) ... Setting up libubsan1:s390x (11.2.0-2) ... Setting up libkrb5-3:s390x (1.18.3-6) ... Setting up ruby2.7 (2.7.4-1) ... Setting up libgcc-9-dev:s390x (9.4.0-1) ... Setting up libgssapi-krb5-2:s390x (1.18.3-6) ... Setting up libtirpc3:s390x (1.3.1-1) ... Setting up libtirpc-dev:s390x (1.3.1-1) ... Setting up libnsl2:s390x (1.3.0-2) ... Setting up libnsl-dev:s390x (1.3.0-2) ... Setting up libc6-dev:s390x (2.31-13) ... Setting up libbz2-dev:s390x (1.0.8-4) ... Setting up libstdc++-9-dev:s390x (9.4.0-1) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.31-13) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-4 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-13 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-s390x-cross_10.2.1-6cross1 libstdc++-9-dev_9.4.0-1 libstdc++6_11.2.0-2 libstdc++6-s390x-cross_10.2.1-6cross1 linux-libc-dev_5.10.46-4 Package versions: adduser_3.118 apt_2.3.8 asciidoctor_2.0.12-2 autoconf_2.69-14 automake_1:1.16.4-1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.51 bash_5.1-3+b1 binutils_2.37-4 binutils-common_2.37-4 binutils-s390x-linux-gnu_2.37-4 binutils-x86-64-linux-gnu_2.37-4 bsdextrautils_2.36.1-8 bsdutils_1:2.36.1-8 build-essential_12.9 bzip2_1.0.8-4 ca-certificates_20210119 coreutils_8.32-4+b1 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-s390x-linux-gnu_10.2.1-6cross1 cpp-8_8.4.0-7 cpp-s390x-linux-gnu_4:10.2.1-1 cross-config_2.6.18+nmu1 crossbuild-essential-s390x_12.9 d-shlibs_0.99 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-exec_0.23.4 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.2-2 fakeroot_1.25.3-1.1 fdisk_2.36.1-8 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-s390x-linux-gnu_10.2.1-6cross1 g++-s390x-linux-gnu_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-base_10.2.1-6 gcc-10-cross-base_10.2.1-6cross1 gcc-10-s390x-linux-gnu_10.2.1-6cross1 gcc-10-s390x-linux-gnu-base_10.2.1-6cross1 gcc-11-base_11.2.0-2 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-1 gcc-s390x-linux-gnu_4:10.2.1-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 help2man_1.48.4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.3.8 libarchive-zip-perl_1.68-1 libasan5_9.4.0-1 libasan6_11.2.0-2 libasan6-s390x-cross_10.2.1-6cross1 libatomic1_11.2.0-2 libatomic1-s390x-cross_10.2.1-6cross1 libattr1_1:2.4.48-6 libaudit-common_1:3.0.5-1 libaudit1_1:3.0.5-1 libbinutils_2.37-4 libblkid1_2.36.1-8 libbsd0_0.11.3-1 libbz2-1.0_1.0.8-4 libbz2-dev_1.0.8-4 libc-bin_2.31-13 libc-dev-bin_2.31-13 libc6_2.31-13 libc6-dev_2.31-13 libc6-dev-s390x-cross_2.31-9cross4 libc6-s390x-cross_2.31-9cross4 libcap-ng0_0.7.9-2.2+b1 libcc1-0_11.2.0-2 libcom-err2_1.46.2-2 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.18-5 libcrypt1_1:4.4.18-5 libctf-nobfd0_2.37-4 libctf0_2.37-4 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.3.4 libdebian-dpkgcross-perl_2.6.18+nmu1 libdpkg-perl_1.20.9 libedit2_3.1-20210714-1 libelf1_0.185-2 libext2fs2_1.46.2-2 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-8 libffi6_3.2.1-9 libffi7_3.3-6 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-6 libgcc-10-dev-s390x-cross_10.2.1-6cross1 libgcc-9-dev_9.4.0-1 libgcc-s1_11.2.0-2 libgcc-s1-s390x-cross_10.2.1-6cross1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_11.2.0-2 libgomp1-s390x-cross_10.2.1-6cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.23-1 libitm1_11.2.0-2 libitm1-s390x-cross_10.2.1-6cross1 libk5crypto3_1.18.3-6 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-6 libkrb5support0_1.18.3-6 liblocale-gettext-perl_1.07-4+b1 liblsan0_11.2.0-2 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmd0_1.0.3-3 libmount1_2.36.1-8 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncursesw6_6.2+20201114-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-9 libpam-modules-bin_1.4.0-9 libpam-runtime_1.4.0-9 libpam0g_1.4.0-9 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-5 libpipeline1_1.5.3-1 libquadmath0_11.2.0-2 libruby2.7_2.7.4-1 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.13-1 libsimde-dev_0.7.2-4 libsmartcols1_2.36.1-8 libss2_1.46.2-2 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-s390x-cross_10.2.1-6cross1 libstdc++-9-dev_9.4.0-1 libstdc++6_11.2.0-2 libstdc++6-s390x-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.9-1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtsan0_11.2.0-2 libubsan1_11.2.0-2 libubsan1-s390x-cross_10.2.1-6cross1 libuchardet0_0.0.7-1 libudev1_247.9-1 libunistring2_0.9.10-4 libuuid1_2.36.1-8 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2 libyaml-0-2_0.2.2-1 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 linux-libc-dev_5.10.46-4 linux-libc-dev-s390x-cross_5.10.13-1cross4 login_1:4.8.1-1 logsave_1.46.2-2 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-8 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 openssl_1.1.1k-1 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-5 perl-base_5.32.1-5 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-5 po-debconf_1.0.21+nmu1 rake_13.0.3-1 ruby_1:2.7+2 ruby-asciidoctor_2.0.12-2 ruby-minitest_5.13.0-1 ruby-net-telnet_0.1.1-2 ruby-power-assert_1.1.7-2 ruby-rubygems_3.2.5-2 ruby-test-unit_3.3.9-1 ruby-xmlrpc_0.3.0-2 ruby2.7_2.7.4-1 rubygems-integration_1.18 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 util-linux_2.36.1-8 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: kmc Binary: kmc, libkmc-dev Architecture: any Version: 3.1.1+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Jorge Soares , Sascha Steinbiss , Kevin Murray , Étienne Mollier Homepage: http://sun.aei.polsl.pl/kmc Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/kmc Vcs-Git: https://salsa.debian.org/med-team/kmc.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 13), dh-exec, zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev Package-List: kmc deb science optional arch=any libkmc-dev deb libdevel optional arch=any Checksums-Sha1: 8a25991be0903612638d1db6b843577170fea19a 241704 kmc_3.1.1+dfsg.orig.tar.xz 8ca957e42ceae9076e08ff0a5aadd51798fcc2b2 32156 kmc_3.1.1+dfsg-3.debian.tar.xz Checksums-Sha256: e23ca6920b1532cd0941a54f1205d647874a0f1de384b20bdde906a069143b89 241704 kmc_3.1.1+dfsg.orig.tar.xz c4bb1e70c0806c9d250b728ad94afff67dfc01125ad1b3afaeea2c0262a84fcb 32156 kmc_3.1.1+dfsg-3.debian.tar.xz Files: ad22eea17f7a0f833b3190bba5d982fd 241704 kmc_3.1.1+dfsg.orig.tar.xz 866d2674c9ca1aa6b84346a5db31c44d 32156 kmc_3.1.1+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- 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using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kmc_3.1.1+dfsg-3.dsc dpkg-source: info: extracting kmc in /<> dpkg-source: info: unpacking kmc_3.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking kmc_3.1.1+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use-shared-libs dpkg-source: info: applying makefile.patch dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch dpkg-source: info: applying newish_gcc_build_fix.patch dpkg-source: info: applying disable-python-bindings.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying simde Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-85daf597-5271-435e-a4de-aea263846bbc SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kmc dpkg-buildpackage: info: source version 3.1.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -rf /<>/debian/man_src/*.html /<>/debian/man_src/*.? rm -rf /<>/debian/man dh_auto_clean -- install -d /<>/kmc-3.1.1\+dfsg/debian/.debhelper/generated/_source/home make -j1 clean make[2]: Entering directory '/<>' rm -f kmer_counter/*.o rm -f kmc_api/*.o rm -f kmc_dump/*.o rm -f kmc_tools/*.o rm -f py_kmc_api/*.o rm -f py_kmc_api/*.so rm -rf bin rm -f libkmc.a make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars debian/files rm -fr -- debian/kmc/ debian/tmp/ debian/libkmc-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a install -d /<>/kmc-3.1.1\+dfsg/debian/.debhelper/generated/_source/home debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc make[2]: Entering directory '/<>' s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/kmer_counter.cpp -o kmer_counter/kmer_counter.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/mmer.cpp -o kmer_counter/mmer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/mem_disk_file.cpp -o kmer_counter/mem_disk_file.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/rev_byte.cpp -o kmer_counter/rev_byte.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/bkb_writer.cpp -o kmer_counter/bkb_writer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/cpu_info.cpp -o kmer_counter/cpu_info.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/bkb_reader.cpp -o kmer_counter/bkb_reader.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/fastq_reader.cpp -o kmer_counter/fastq_reader.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/timer.cpp -o kmer_counter/timer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/develop.cpp -o kmer_counter/develop.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/kb_completer.cpp -o kmer_counter/kb_completer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/kb_storer.cpp -o kmer_counter/kb_storer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/kmer.cpp -o kmer_counter/kmer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/splitter.cpp -o kmer_counter/splitter.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/kb_collector.cpp -o kmer_counter/kb_collector.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmer_counter/raduls_sse2.cpp -o kmer_counter/raduls_sse2.o mkdir -p bin s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -o bin/kmc kmer_counter/kmer_counter.o kmer_counter/mmer.o kmer_counter/mem_disk_file.o kmer_counter/rev_byte.o kmer_counter/bkb_writer.o kmer_counter/cpu_info.o kmer_counter/bkb_reader.o kmer_counter/fastq_reader.o kmer_counter/timer.o kmer_counter/develop.o kmer_counter/kb_completer.o kmer_counter/kb_storer.o kmer_counter/kmer.o kmer_counter/splitter.o kmer_counter/kb_collector.o kmer_counter/raduls_sse2.o -Wl,-z,relro -Wl,-z,now -lm -O3 -lpthread -std=c++11 -lz -lbz2 s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_api/mmer.cpp -o kmc_api/mmer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o mkdir -p bin s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -o bin/kmc_dump kmc_dump/nc_utils.o kmc_dump/kmc_dump.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -O3 -lpthread -std=c++11 -lz -lbz2 s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/kmc_header.cpp -o kmc_tools/kmc_header.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o In file included from kmc_tools/kmc_tools.cpp:17: kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 8]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 7]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 6]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 5]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 4]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 3]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 2]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 1]’: kmc_tools/check_kmer.h:97:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/parser.cpp -o kmc_tools/parser.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o s390x-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o mkdir -p bin s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -o bin/kmc_tools kmc_tools/kmc_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o -Wl,-z,relro -Wl,-z,now -lm -O3 -lpthread -std=c++14 -lz -lbz2 ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o ranlib libkmc.a make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars rm -fr -- debian/.debhelper/generated/kmc/ debian/kmc/ debian/tmp/ debian/.debhelper/generated/libkmc-dev/ debian/libkmc-dev/ dh_auto_install -a install -d /<>/kmc-3.1.1\+dfsg/debian/tmp rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -d debian/kmc/usr/bin cp --reflink=auto -a ./bin/kmc ./bin/kmc_dump ./bin/kmc_tools debian/kmc/usr/bin/ install -d debian/.debhelper/generated/kmc install -d debian/libkmc-dev/usr/include/kmc cp --reflink=auto -a ./kmc_api/kmc_file.h ./kmc_api/kmer_api.h ./kmc_api/kmer_defs.h ./kmc_api/mmer.h ./kmc_api/stdafx.h debian/libkmc-dev/usr/include/kmc/ install -d debian/libkmc-dev/usr/lib/s390x-linux-gnu cp --reflink=auto -a ./libkmc.a debian/libkmc-dev/usr/lib/s390x-linux-gnu/ install -d debian/.debhelper/generated/libkmc-dev make[1]: Leaving directory '/<>' dh_installdocs -a install -d debian/kmc/usr/share/doc/kmc install -p -m0644 debian/TODO debian/kmc/usr/share/doc/kmc/TODO.Debian install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright install -d debian/libkmc-dev/usr/share/doc/libkmc-dev install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/kmc/usr/share/doc/kmc/changelog.Debian install -p -m0644 debian/changelog debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/man /<>/debian/usage_to_man Can't exec "1": No such file or directory at /<>/debian/usage_to_man line 19. Creating manpages Manpage creation complete Manpage creation complete asciidoctor -a docdate='' -b manpage /<>/debian/man_src/*.adoc cp /<>/debian/man_src/*.? /<>/debian/man dh_installman -- install -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1 install -p -m0644 ./man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1 install -p -m0644 ./debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 install -p -m0644 ./debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 install -p -m0644 ./debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 install -p -m0644 ./debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 install -p -m0644 ./debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 install -p -m0644 ./debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 install -p -m0644 ./debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 install -p -m0644 ./debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 install -p -m0644 ./debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 install -p -m0644 ./debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 install -p -m0644 ./debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1 man-recode --to-code UTF-8 --suffix .dh-new debian/kmc/usr/share/man/man1/kmc.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools.1 mv debian/kmc/usr/share/man/man1/kmc.1.dh-new debian/kmc/usr/share/man/man1/kmc.1 mv debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_dump.1 mv debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-compact.1 mv debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-complex.1 mv debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 mv debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-dump.1 mv debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-filter.1 mv debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 mv debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 mv debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 mv debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-sort.1 mv debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-union.1 mv debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools.1 chmod 0644 -- debian/kmc/usr/share/man/man1/kmc.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools.1 make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/kmc chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 cd '/<>' cd debian/libkmc-dev chmod a-x usr/share/doc/libkmc-dev/changelog.Debian gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian cd '/<>' dh_fixperms -a find debian/kmc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/kmc/usr/share/doc -type f -a -true -a ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/kmc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libkmc-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libkmc-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libkmc-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_dwz -a -a install -d debian/kmc/usr/lib/debug/.dwz/s390x-linux-gnu dwz -mdebian/kmc/usr/lib/debug/.dwz/s390x-linux-gnu/kmc.debug -M/usr/lib/debug/.dwz/s390x-linux-gnu/kmc.debug -- debian/kmc/usr/bin/kmc debian/kmc/usr/bin/kmc_dump debian/kmc/usr/bin/kmc_tools s390x-linux-gnu-objcopy --compress-debug-sections debian/kmc/usr/lib/debug/.dwz/s390x-linux-gnu/kmc.debug dh_strip -a -a install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/37 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_tools debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/37/f97e7fe5ee8bae96d2303b7accb33508072091.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/37/f97e7fe5ee8bae96d2303b7accb33508072091.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_tools s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/37/f97e7fe5ee8bae96d2303b7accb33508072091.debug debian/kmc/usr/bin/kmc_tools install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/95 s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_dump debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/95/e3c8138d535cc8aa4d7e0f31dcfe0100183304.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/95/e3c8138d535cc8aa4d7e0f31dcfe0100183304.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_dump s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/95/e3c8138d535cc8aa4d7e0f31dcfe0100183304.debug debian/kmc/usr/bin/kmc_dump install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/ed s390x-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/ed/a5e7d09c3ed58f83afd68fbeab25e0034a79ee.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/ed/a5e7d09c3ed58f83afd68fbeab25e0034a79ee.debug s390x-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc s390x-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/ed/a5e7d09c3ed58f83afd68fbeab25e0034a79ee.debug debian/kmc/usr/bin/kmc install -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/kmc/usr/lib/debug/.dwz/s390x-linux-gnu debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/kmc/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/kmc/usr/lib/debug install -d debian/.debhelper/kmc/dbgsym-root/usr/share/doc ln -s kmc debian/.debhelper/kmc/dbgsym-root/usr/share/doc/kmc-dbgsym s390x-linux-gnu-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libkmc-dev/usr/lib/s390x-linux-gnu/libkmc.a dh_makeshlibs -a -a rm -f debian/kmc/DEBIAN/shlibs rm -f debian/libkmc-dev/DEBIAN/shlibs dh_shlibdeps -a -a install -d debian/kmc/DEBIAN dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/usr/bin/kmc_tools debian/kmc/usr/bin/kmc_dump debian/kmc/usr/bin/kmc dh_installdeb -a install -d debian/libkmc-dev/DEBIAN rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.7.2-4), " echo misc:Depends= >> debian/kmc.substvars echo misc:Pre-Depends= >> debian/kmc.substvars install -d debian/.debhelper/kmc/dbgsym-root/DEBIAN dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/dbgsym-root "-Vsimde:Built-Using=simde (= 0.7.2-4), " -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=debug symbols for kmc" "-DBuild-Ids=37f97e7fe5ee8bae96d2303b7accb33508072091 95e3c8138d535cc8aa4d7e0f31dcfe0100183304 eda5e7d09c3ed58f83afd68fbeab25e0034a79ee" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc "-Vsimde:Built-Using=simde (= 0.7.2-4), " chmod 0644 -- debian/kmc/DEBIAN/control echo misc:Depends= >> debian/libkmc-dev.substvars echo misc:Pre-Depends= >> debian/libkmc-dev.substvars dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev "-Vsimde:Built-Using=simde (= 0.7.2-4), " dpkg-gencontrol: warning: Depends field of package libkmc-dev: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libkmc-dev/DEBIAN/control make[1]: Leaving directory '/<>' dh_md5sums -a cd debian/kmc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/kmc/DEBIAN/md5sums cd debian/.debhelper/kmc/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums cd debian/libkmc-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libkmc-dev/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/kmc .. dpkg-deb: building package 'kmc' in '../kmc_3.1.1+dfsg-3_s390x.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/kmc/dbgsym-root .. dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_3.1.1+dfsg-3_s390x.deb'. dpkg-deb --root-owner-group --build debian/libkmc-dev .. dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_3.1.1+dfsg-3_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../kmc_3.1.1+dfsg-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-08-17T00:12:07Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kmc_3.1.1+dfsg-3_s390x.changes: ------------------------------- Format: 1.8 Date: Fri, 22 Jan 2021 13:43:22 +0100 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Built-For-Profiles: cross nocheck Architecture: s390x Version: 3.1.1+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: kmc - count kmers in genomic sequences libkmc-dev - library to access KMC k-mer count files Changes: kmc (3.1.1+dfsg-3) unstable; urgency=medium . * Team upload. * Adjust simde patch to fix i386 FTFBS. Checksums-Sha1: 05c917da2349ea4092f0b3b6958742b6052db760 14413432 kmc-dbgsym_3.1.1+dfsg-3_s390x.deb cc679222c5fa28aef0d6aaa258400b32f9b46914 6198 kmc_3.1.1+dfsg-3_s390x.buildinfo 2e0120db7fe4a40ac5142934d967c02343177789 663648 kmc_3.1.1+dfsg-3_s390x.deb 2d96c022925739afe0450079a1a0dc9279da7587 27412 libkmc-dev_3.1.1+dfsg-3_s390x.deb Checksums-Sha256: c7ba0e9e58ca91c33f784c2fefddb5756b1afad17d061499f5eb70ff54af647d 14413432 kmc-dbgsym_3.1.1+dfsg-3_s390x.deb 6a576e4d08c76fab5110a5b238ac7802303f635c7258394ff65a627e059b17ad 6198 kmc_3.1.1+dfsg-3_s390x.buildinfo 9ef01a68d36c166dbbb3126856746723eb1c9335d8852d30e0f99344428845e1 663648 kmc_3.1.1+dfsg-3_s390x.deb b96f1cfcf89080301f5ce6d0e29058a4095acf24fdedda1ea723115f3224a8df 27412 libkmc-dev_3.1.1+dfsg-3_s390x.deb Files: 2fe00babc082c4a13cc9903cede5dc6b 14413432 debug optional kmc-dbgsym_3.1.1+dfsg-3_s390x.deb 2dcdc35cc474ef5f32d14117cb937d2e 6198 science optional kmc_3.1.1+dfsg-3_s390x.buildinfo beae71421f5f457daf66cccc48378a96 663648 science optional kmc_3.1.1+dfsg-3_s390x.deb 7c8d8d2c2cd1216bf70c87370b2181ed 27412 libdevel optional libkmc-dev_3.1.1+dfsg-3_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Architecture: s390x Version: 3.1.1+dfsg-3 Checksums-Md5: 2fe00babc082c4a13cc9903cede5dc6b 14413432 kmc-dbgsym_3.1.1+dfsg-3_s390x.deb beae71421f5f457daf66cccc48378a96 663648 kmc_3.1.1+dfsg-3_s390x.deb 7c8d8d2c2cd1216bf70c87370b2181ed 27412 libkmc-dev_3.1.1+dfsg-3_s390x.deb Checksums-Sha1: 05c917da2349ea4092f0b3b6958742b6052db760 14413432 kmc-dbgsym_3.1.1+dfsg-3_s390x.deb 2e0120db7fe4a40ac5142934d967c02343177789 663648 kmc_3.1.1+dfsg-3_s390x.deb 2d96c022925739afe0450079a1a0dc9279da7587 27412 libkmc-dev_3.1.1+dfsg-3_s390x.deb Checksums-Sha256: c7ba0e9e58ca91c33f784c2fefddb5756b1afad17d061499f5eb70ff54af647d 14413432 kmc-dbgsym_3.1.1+dfsg-3_s390x.deb 9ef01a68d36c166dbbb3126856746723eb1c9335d8852d30e0f99344428845e1 663648 kmc_3.1.1+dfsg-3_s390x.deb b96f1cfcf89080301f5ce6d0e29058a4095acf24fdedda1ea723115f3224a8df 27412 libkmc-dev_3.1.1+dfsg-3_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 17 Aug 2021 00:12:07 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.3.8), asciidoctor (= 2.0.12-2), autoconf (= 2.69-14), automake (= 1:1.16.4-1), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 11.1), base-passwd (= 3.5.51), bash (= 5.1-3+b1), binutils (= 2.37-4), binutils-common (= 2.37-4), binutils-x86-64-linux-gnu (= 2.37-4), bsdextrautils (= 2.36.1-8), bsdutils (= 1:2.36.1-8), build-essential (= 12.9), bzip2 (= 1.0.8-4), ca-certificates (= 20210119), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.2.1-6), d-shlibs (= 0.99), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.77), debhelper (= 13.3.4), debian-archive-keyring (= 2021.1.1), debianutils (= 4.11.2), dh-autoreconf (= 20), dh-exec (= 0.23.4), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.2.1-6), gcc (= 4:10.2.1-1), gcc-10 (= 10.2.1-6), gcc-10-base (= 10.2.1-6), gcc-11-base (= 11.2.0-2), gettext (= 0.21-4), gettext-base (= 0.21-4), gpgv (= 2.2.27-2), grep (= 3.6-1), groff-base (= 1.22.4-6), gzip (= 1.10-4), help2man (= 1.48.4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10), libapt-pkg6.0 (= 2.3.8), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.2.0-2), libatomic1 (= 11.2.0-2), libattr1 (= 1:2.4.48-6), libaudit-common (= 1:3.0.5-1), libaudit1 (= 1:3.0.5-1), libbinutils (= 2.37-4), libblkid1 (= 2.36.1-8), libbsd0 (= 0.11.3-1), libbz2-1.0 (= 1.0.8-4), libbz2-dev (= 1.0.8-4), libc-bin (= 2.31-13), libc-dev-bin (= 2.31-13), libc6 (= 2.31-13), libc6-dev (= 2.31-13), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 11.2.0-2), libcom-err2 (= 1.46.2-2), libcrypt-dev (= 1:4.4.18-5), libcrypt1 (= 1:4.4.18-5), libctf-nobfd0 (= 2.37-4), libctf0 (= 2.37-4), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.260), libdebhelper-perl (= 13.3.4), libdpkg-perl (= 1.20.9), libedit2 (= 3.1-20210714-1), libelf1 (= 0.185-2), libffi7 (= 3.3-6), libfile-stripnondeterminism-perl (= 1.12.0-1), libgcc-10-dev (= 10.2.1-6), libgcc-s1 (= 11.2.0-2), libgcrypt20 (= 1.8.7-6), libgdbm-compat4 (= 1.19-2), libgdbm6 (= 1.19-2), libgmp10 (= 2:6.2.1+dfsg-1), libgnutls30 (= 3.7.1-5), libgomp1 (= 11.2.0-2), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-6), libhogweed6 (= 3.7.3-1), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.23-1), libitm1 (= 11.2.0-2), libk5crypto3 (= 1.18.3-6), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-6), libkrb5support0 (= 1.18.3-6), liblocale-gettext-perl (= 1.07-4+b1), liblsan0 (= 11.2.0-2), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmd0 (= 1.0.3-3), libmount1 (= 2.36.1-8), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.7.3-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.4.0-9), libpam-modules-bin (= 1.4.0-9), libpam-runtime (= 1.4.0-9), libpam0g (= 1.4.0-9), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-5), libpipeline1 (= 1.5.3-1), libquadmath0 (= 11.2.0-2), libruby2.7 (= 2.7.4-1), libseccomp2 (= 2.5.1-1), libselinux1 (= 3.1-3), libsemanage-common (= 3.1-1), libsemanage1 (= 3.1-1+b2), libsepol1 (= 3.1-1), libsigsegv2 (= 2.13-1), libsimde-dev (= 0.7.2-4), libsmartcols1 (= 2.36.1-8), libssl1.1 (= 1.1.1k-1), libstdc++-10-dev (= 10.2.1-6), libstdc++6 (= 11.2.0-2), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.9-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2+20201114-2), libtirpc-common (= 1.3.1-1), libtirpc-dev (= 1.3.1-1), libtirpc3 (= 1.3.1-1), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-2), libubsan1 (= 11.2.0-2), libuchardet0 (= 0.0.7-1), libudev1 (= 247.9-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-8), libxml2 (= 2.9.10+dfsg-6.7), libxxhash0 (= 0.8.0-2), libyaml-0-2 (= 0.2.2-1), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.10.46-4), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), openssl (= 1.1.1k-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-7), perl (= 5.32.1-5), perl-base (= 5.32.1-5), perl-modules-5.32 (= 5.32.1-5), po-debconf (= 1.0.21+nmu1), rake (= 13.0.3-1), ruby (= 1:2.7+2), ruby-asciidoctor (= 2.0.12-2), ruby-minitest (= 5.13.0-1), ruby-net-telnet (= 0.1.1-2), ruby-power-assert (= 1.1.7-2), ruby-rubygems (= 3.2.5-2), ruby-test-unit (= 3.3.9-1), ruby-xmlrpc (= 0.3.0-2), ruby2.7 (= 2.7.4-1), rubygems-integration (= 1.18), sed (= 4.7-1), sensible-utils (= 0.0.14), sysvinit-utils (= 2.96-7), tar (= 1.34+dfsg-1), util-linux (= 2.36.1-8), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1611319402" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kmc-dbgsym_3.1.1+dfsg-3_s390x.deb --------------------------------- new Debian package, version 2.0. size 14413432 bytes: control archive=696 bytes. 448 bytes, 12 lines control 397 bytes, 4 lines md5sums Package: kmc-dbgsym Source: kmc Version: 3.1.1+dfsg-3 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 14909 Depends: kmc (= 3.1.1+dfsg-3) Section: debug Priority: optional Description: debug symbols for kmc Build-Ids: 37f97e7fe5ee8bae96d2303b7accb33508072091 95e3c8138d535cc8aa4d7e0f31dcfe0100183304 eda5e7d09c3ed58f83afd68fbeab25e0034a79ee drwxr-xr-x root/root 0 2021-01-22 12:43 ./ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.build-id/37/ -rw-r--r-- root/root 6185112 2021-01-22 12:43 ./usr/lib/debug/.build-id/37/f97e7fe5ee8bae96d2303b7accb33508072091.debug drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.build-id/95/ -rw-r--r-- root/root 124920 2021-01-22 12:43 ./usr/lib/debug/.build-id/95/e3c8138d535cc8aa4d7e0f31dcfe0100183304.debug drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.build-id/ed/ -rw-r--r-- root/root 8835864 2021-01-22 12:43 ./usr/lib/debug/.build-id/ed/a5e7d09c3ed58f83afd68fbeab25e0034a79ee.debug drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 104752 2021-01-22 12:43 ./usr/lib/debug/.dwz/s390x-linux-gnu/kmc.debug drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-01-22 12:43 ./usr/share/doc/kmc-dbgsym -> kmc kmc_3.1.1+dfsg-3_s390x.deb -------------------------- new Debian package, version 2.0. size 663648 bytes: control archive=1744 bytes. 1622 bytes, 32 lines control 1316 bytes, 19 lines md5sums Package: kmc Version: 3.1.1+dfsg-3 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 3552 Depends: libbz2-1.0, libc6 (>= 2.4), libgcc-s1 (>= 3.0), libstdc++6 (>= 6), zlib1g (>= 1:1.2.6) Built-Using: simde (= 0.7.2-4) Section: science Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: count kmers in genomic sequences The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . Building de Bruijn graphs is a commonly used approach for genome assembly with data from second-generation sequencing. Unfortunately, sequencing errors (frequent in practice) result in huge memory requirements for de Bruijn graphs, as well as long build time. One of the popular approaches to handle this problem is filtering the input reads in such a way that unique k-mers (very likely obtained as a result of an error) are discarded. . Thus, KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows one to use KMC even on rather typical personal computers. When run on high-end servers (what is necessary for KMC competitors) it outperforms them in both memory requirements and speed of computation. The disk space necessary for computation is in order of the size of input data (usually it is smaller). drwxr-xr-x root/root 0 2021-01-22 12:43 ./ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/bin/ -rwxr-xr-x root/root 2169184 2021-01-22 12:43 ./usr/bin/kmc -rwxr-xr-x root/root 55832 2021-01-22 12:43 ./usr/bin/kmc_dump -rwxr-xr-x root/root 1379952 2021-01-22 12:43 ./usr/bin/kmc_tools drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/doc/kmc/ -rw-r--r-- root/root 66 2021-01-22 09:33 ./usr/share/doc/kmc/TODO.Debian -rw-r--r-- root/root 1867 2021-01-22 12:43 ./usr/share/doc/kmc/changelog.Debian.gz -rw-r--r-- root/root 1211 2021-01-22 09:33 ./usr/share/doc/kmc/copyright drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/man/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/man/man1/ -rw-r--r-- root/root 369 2021-01-22 12:43 ./usr/share/man/man1/kmc.1.gz -rw-r--r-- root/root 416 2021-01-22 12:43 ./usr/share/man/man1/kmc_dump.1.gz -rw-r--r-- root/root 837 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-compact.1.gz -rw-r--r-- root/root 1320 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-complex.1.gz -rw-r--r-- root/root 1015 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz -rw-r--r-- root/root 864 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-dump.1.gz -rw-r--r-- root/root 1031 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-filter.1.gz -rw-r--r-- root/root 828 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-histogram.1.gz -rw-r--r-- root/root 973 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-intersect.1.gz -rw-r--r-- root/root 976 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz -rw-r--r-- root/root 884 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-sort.1.gz -rw-r--r-- root/root 952 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools-union.1.gz -rw-r--r-- root/root 1206 2021-01-22 12:43 ./usr/share/man/man1/kmc_tools.1.gz libkmc-dev_3.1.1+dfsg-3_s390x.deb --------------------------------- new Debian package, version 2.0. size 27412 bytes: control archive=964 bytes. 648 bytes, 18 lines control 515 bytes, 8 lines md5sums Package: libkmc-dev Source: kmc Version: 3.1.1+dfsg-3 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 106 Built-Using: simde (= 0.7.2-4) Section: libdevel Priority: optional Homepage: http://sun.aei.polsl.pl/kmc Description: library to access KMC k-mer count files The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . This package contains the C++ library headers for accessing kmc's output file format. drwxr-xr-x root/root 0 2021-01-22 12:43 ./ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/include/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/include/kmc/ -rw-r--r-- root/root 5972 2019-05-28 10:32 ./usr/include/kmc/kmc_file.h -rw-r--r-- root/root 19422 2019-05-28 10:32 ./usr/include/kmc/kmer_api.h -rw-r--r-- root/root 1018 2019-05-28 10:32 ./usr/include/kmc/kmer_defs.h -rw-r--r-- root/root 4892 2019-05-28 10:32 ./usr/include/kmc/mmer.h -rw-r--r-- root/root 87 2019-05-28 10:32 ./usr/include/kmc/stdafx.h drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/lib/s390x-linux-gnu/ -rw-r--r-- root/root 61262 2021-01-22 12:43 ./usr/lib/s390x-linux-gnu/libkmc.a drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-01-22 12:43 ./usr/share/doc/libkmc-dev/ -rw-r--r-- root/root 1867 2021-01-22 12:43 ./usr/share/doc/libkmc-dev/changelog.Debian.gz -rw-r--r-- root/root 1211 2021-01-22 09:33 ./usr/share/doc/libkmc-dev/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. 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The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:s390x t1utils unzip 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. 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Preparing to unpack .../88-sbuild-build-depends-lintian-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40) ... Setting up libunicode-utf8-perl (0.62-1+b2) ... Setting up libmouse-perl (2.5.10-1+b1) ... Setting up libdata-messagepack-perl (1.01-2) ... Setting up libdynaloader-functions-perl (0.003-1.1) ... Setting up libtext-glob-perl (0.11-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.55-1) ... Setting up libclone-perl (0.45-1+b1) ... Setting up libsub-identify-perl (0.14-1+b3) ... Setting up libcpanel-json-xs-perl (4.25-1+b1) ... Setting up libdevel-size-perl (0.83-1+b2) ... Setting up unzip (6.0-26) ... Setting up libsqlite3-0:amd64 (3.34.1-3) ... Setting up libyaml-libyaml-perl (0.82+repack-1+b1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-1+b3) ... Setting up libassuan0:amd64 (2.5.4-1) ... Setting up libconfig-tiny-perl (2.26-1) ... Setting up libsereal-encoder-perl (4.018+ds-1+b1) ... Setting up liblist-utilsby-perl (0.11-1) ... Setting up libsub-install-perl (0.928-1.1) ... Setting up libnumber-compare-perl (0.03-1.1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004003-1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libfile-find-rule-perl (0.34-1) ... Setting up libipc-system-simple-perl (1.30-1) ... Setting up libnet-domain-tld-perl (1.75-1.1) ... Setting up lzip (1.22-3) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.62-1+b3) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up liblist-moreutils-xs-perl (0.430-2) ... Setting up libparams-util-perl (1.102-1+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl (3.5.8-1+b1) ... Setting up libsub-exporter-progressive-perl (0.001013-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl (0.59-2+b1) ... Setting up libpath-tiny-perl (0.118-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libaliased-perl (0.34-1.1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b7) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1.1) ... Setting up libtext-levenshteinxs-perl (0.03-4+b8) ... Setting up libperlio-gzip-perl (0.19-1+b7) ... Setting up readline-common (8.1-2) ... Setting up libhtml-html5-entities-perl (0.004-1.1) ... Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.6-1) ... Setting up liburi-perl (5.08-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:amd64 (8.1-2) ... Setting up libtype-tiny-perl (1.012002-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.12-1+b1) ... Setting up libexception-class-perl (1.44-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up gpgconf (2.2.27-2) ... Setting up gpg (2.2.27-2) ... Setting up libsub-exporter-perl (0.987-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libmoox-aliases-perl (0.001006-1.1) ... Setting up libb-hooks-endofscope-perl (0.24-1.1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.104.0) ... Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.31-13) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 268148 Build-Time: 302 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 38 Job: kmc_3.1.1+dfsg-3 Lintian: pass Machine Architecture: amd64 Package: kmc Package-Time: 354 Source-Version: 3.1.1+dfsg-3 Space: 268148 Status: successful Version: 3.1.1+dfsg-3 -------------------------------------------------------------------------------- Finished at 2021-08-17T00:12:07Z Build needed 00:05:54, 268148k disk space