sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | kmc 3.2.4+dfsg-1 (arm64) Sun, 18 Feb 2024 09:44:35 +0000 | +==============================================================================+ Package: kmc Version: 3.2.4+dfsg-1 Source Version: 3.2.4+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-9ccd3fb6-2691-4a74-893b-0db9307bd70d' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-8aKOwK/resolver-pPzaJ5' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-02-18-0813.19-F-2024-02-18-0211.19.pdiff [46.1 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-02-18-0813.19-F-2024-02-18-0211.19.pdiff [35.4 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-02-18-0813.19-F-2024-02-18-0211.19.pdiff [46.1 kB] Get:6 http://localhost:3142/debian sid/main arm64 Packages [9622 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-02-18-0813.19-F-2024-02-18-0211.19.pdiff [35.4 kB] Fetched 10.0 MB in 3s (3716 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'kmc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/kmc.git Please use: git clone https://salsa.debian.org/med-team/kmc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 445 kB of source archives. Get:1 http://localhost:3142/debian sid/main kmc 3.2.4+dfsg-1 (dsc) [2234 B] Get:2 http://localhost:3142/debian sid/main kmc 3.2.4+dfsg-1 (tar) [409 kB] Get:3 http://localhost:3142/debian sid/main kmc 3.2.4+dfsg-1 (diff) [33.9 kB] Fetched 445 kB in 0s (9155 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/kmc-8aKOwK/kmc-3.2.4+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/kmc-8aKOwK' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev, debhelper, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [796 B] Get:5 copy:/<>/apt_archive ./ Packages [839 B] Fetched 2244 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: asciidoctor autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils ca-certificates cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-cross-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libncurses6 libnsl-dev:arm64 libnsl2:arm64 libpipeline1 libruby libruby3.1 libsimde-dev libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-0-2 libyaml-perl linux-libc-dev-arm64-cross m4 man-db openssl po-debconf rake ruby ruby-asciidoctor ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 krb5-doc:arm64 krb5-user:arm64 libstdc++-11-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl ri ruby-dev bundler Recommended packages: curl | wget | lynx bzip2-doc:arm64 libidn2-0:arm64 libarchive-cpio-perl krb5-locales:arm64 libgpm2 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl zip fonts-lato libjs-jquery The following NEW packages will be installed: asciidoctor autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils ca-certificates cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-cross-base gcc-14-base:arm64 gcc-14-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbsd0 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libedit2 libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libncurses6 libnsl-dev:arm64 libnsl2:arm64 libpipeline1 libruby libruby3.1 libsimde-dev libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-0-2 libyaml-perl linux-libc-dev-arm64-cross m4 man-db openssl po-debconf rake ruby ruby-asciidoctor ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 128 newly installed, 0 to remove and 0 not upgraded. Need to get 109 MB of archives. After this operation, 455 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [960 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6+b1 [15.2 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.1.5-1 [1241 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20240203 [158 kB] Get:6 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2+b1 [314 kB] Get:7 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2+b1 [105 kB] Get:8 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2+b1 [43.1 kB] Get:9 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get:10 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:11 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3 [1180 kB] Get:12 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.3-6 [89.4 kB] Get:13 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1+b2 [38.1 kB] Get:14 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.0-3 [1401 kB] Get:15 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:16 http://localhost:3142/debian sid/main amd64 rubygems-integration all 1.18 [6704 B] Get:17 http://localhost:3142/debian sid/main amd64 rake all 13.0.6-3 [83.9 kB] Get:18 http://localhost:3142/debian sid/main amd64 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 ruby-webrick all 1.8.1-1 [51.4 kB] Get:20 http://localhost:3142/debian sid/main amd64 ruby-xmlrpc all 0.3.2-2 [24.4 kB] Get:21 http://localhost:3142/debian sid/main amd64 libruby amd64 1:3.1 [4972 B] Get:22 http://localhost:3142/debian sid/main amd64 ruby-sdbm amd64 1.0.0-5+b2 [15.5 kB] Get:23 http://localhost:3142/debian sid/main amd64 libbsd0 amd64 0.11.8-1 [125 kB] Get:24 http://localhost:3142/debian sid/main amd64 libedit2 amd64 3.1-20230828-1 [93.1 kB] Get:25 http://localhost:3142/debian sid/main amd64 libncurses6 amd64 6.4+20240113-1 [104 kB] Get:26 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libruby3.1 amd64 3.1.2-8 [5401 kB] Get:28 http://localhost:3142/debian sid/main amd64 ruby3.1 amd64 3.1.2-8 [663 kB] Get:29 http://localhost:3142/debian sid/main amd64 ruby-rubygems all 3.4.20-1 [309 kB] Get:30 http://localhost:3142/debian sid/main amd64 ruby amd64 1:3.1 [5868 B] Get:31 http://localhost:3142/debian sid/main amd64 ruby-asciidoctor all 2.0.20-1 [212 kB] Get:32 http://localhost:3142/debian sid/main amd64 asciidoctor all 2.0.20-1 [87.7 kB] Get:33 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:34 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:35 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:36 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:37 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-14 [496 kB] Get:38 http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.42-2 [3375 kB] Get:39 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu-base amd64 13.2.0-12cross1 [42.7 kB] Get:40 http://localhost:3142/debian sid/main amd64 cpp-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [9774 kB] Get:41 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:13.2.0-7 [4724 B] Get:42 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:43 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB] Get:44 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB] Get:45 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.37-12cross1 [1006 kB] Get:46 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 14-20240127-1cross1 [43.7 kB] Get:47 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 14-20240127-1cross1 [116 kB] Get:48 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 14-20240127-1cross1 [23.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 14-20240127-1cross1 [9360 B] Get:50 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 14-20240127-1cross1 [2561 kB] Get:51 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 14-20240127-1cross1 [1155 kB] Get:52 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 14-20240127-1cross1 [2367 kB] Get:53 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 14-20240127-1cross1 [588 kB] Get:54 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 14-20240127-1cross1 [1034 kB] Get:55 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 14-20240127-1cross1 [1386 kB] Get:56 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-arm64-cross all 13.2.0-12cross1 [2231 kB] Get:57 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [18.8 MB] Get:58 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:13.2.0-7 [1444 B] Get:59 http://localhost:3142/debian sid/main amd64 linux-libc-dev-arm64-cross all 6.5.8-1cross1 [1990 kB] Get:60 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.37-12cross1 [1427 kB] Get:61 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-arm64-cross all 13.2.0-12cross1 [2142 kB] Get:62 http://localhost:3142/debian sid/main amd64 g++-13-aarch64-linux-gnu amd64 13.2.0-12cross1 [10.7 MB] Get:63 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:13.2.0-7 [1200 B] Get:64 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:65 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:66 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:67 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:68 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:70 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:71 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b2 [313 kB] Get:72 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:73 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:74 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:75 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:76 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:77 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:78 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:79 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.10 [3484 B] Get:80 http://localhost:3142/debian sid/main amd64 d-shlibs all 0.106 [10.9 kB] Get:81 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.13 [85.0 kB] Get:82 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:83 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:84 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:85 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get:86 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:87 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:88 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.190-1+b1 [176 kB] Get:89 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:90 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get:91 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:92 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:93 http://localhost:3142/debian sid/main amd64 debhelper all 13.13 [889 kB] Get:94 http://localhost:3142/debian sid/main arm64 gcc-11-base arm64 11.4.0-7 [40.3 kB] Get:95 http://localhost:3142/debian sid/main arm64 gcc-14-base arm64 14-20240201-3 [42.4 kB] Get:96 http://localhost:3142/debian sid/main amd64 help2man amd64 1.49.3 [198 kB] Get:97 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 14-20240201-3 [43.7 kB] Get:98 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.37-15 [2318 kB] Get:99 http://localhost:3142/debian sid/main arm64 libasan6 arm64 11.4.0-7 [1951 kB] Get:100 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 14-20240201-3 [9968 B] Get:101 http://localhost:3142/debian sid/main arm64 libbz2-1.0 arm64 1.0.8-5+b2 [38.1 kB] Get:102 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.36-4 [90.5 kB] Get:103 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-4 [121 kB] Get:104 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.20.1-5+b1 [32.8 kB] Get:105 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.47.0-2+b1 [19.9 kB] Get:106 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.20.1-5+b1 [80.1 kB] Get:107 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get:108 http://localhost:3142/debian sid/main arm64 libssl3 arm64 3.1.5-1 [1838 kB] Get:109 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.20.1-5+b1 [315 kB] Get:110 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.20.1-5+b1 [124 kB] Get:111 http://localhost:3142/debian sid/main arm64 libtirpc3 arm64 1.3.4+ds-1 [77.9 kB] Get:112 http://localhost:3142/debian sid/main arm64 libnsl2 arm64 1.3.0-3 [37.5 kB] Get:113 http://localhost:3142/debian sid/main arm64 libtirpc-dev arm64 1.3.4+ds-1 [192 kB] Get:114 http://localhost:3142/debian sid/main arm64 libnsl-dev arm64 1.3.0-3 [66.3 kB] Get:115 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.37-15 [1433 kB] Get:116 http://localhost:3142/debian sid/main arm64 libbz2-dev arm64 1.0.8-5+b2 [31.7 kB] Get:117 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 14-20240201-3 [122 kB] Get:118 http://localhost:3142/debian sid/main arm64 libitm1 arm64 14-20240201-3 [23.6 kB] Get:119 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 14-20240201-3 [1156 kB] Get:120 http://localhost:3142/debian sid/main arm64 libtsan0 arm64 11.4.0-7 [1957 kB] Get:121 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 14-20240201-3 [636 kB] Get:122 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 14-20240201-3 [1034 kB] Get:123 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 14-20240201-3 [1435 kB] Get:124 http://localhost:3142/debian sid/main arm64 libgcc-11-dev arm64 11.4.0-7 [935 kB] Get:125 http://localhost:3142/debian sid/main amd64 libsimde-dev all 0.7.6-1 [384 kB] Get:126 http://localhost:3142/debian sid/main arm64 libstdc++-11-dev arm64 11.4.0-7 [1942 kB] Get:127 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.3.dfsg-3+b1 [83.9 kB] Get:128 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3+b1 [916 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 109 MB in 1s (171 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 16278 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.1.5-1_amd64.deb ... Unpacking openssl (3.1.5-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2+b1) ... 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Unpacking libstdc++-11-dev:arm64 (11.4.0-7) ... Selecting previously unselected package zlib1g:arm64. Preparing to unpack .../125-zlib1g_1%3a1.3.dfsg-3+b1_arm64.deb ... Unpacking zlib1g:arm64 (1:1.3.dfsg-3+b1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../126-zlib1g-dev_1%3a1.3.dfsg-3+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3+b1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:arm64. Preparing to unpack .../127-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libpipeline1:amd64 (1.5.7-1+b2) ... Setting up libsimde-dev (0.7.6-1) ... Setting up gcc-11-base:arm64 (11.4.0-7) ... Setting up libfile-which-perl (1.27-2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up gcc-14-base:arm64 (14-20240201-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libdebhelper-perl (13.13) ... Setting up libmagic1:amd64 (1:5.45-2+b1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up binutils-aarch64-linux-gnu (2.42-2) ... Setting up gcc-14-cross-base (14-20240127-1cross1) ... Setting up file (1:5.45-2+b1) ... Setting up libyaml-perl (1.31-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up libncurses6:amd64 (6.4+20240113-1) ... Setting up gcc-13-cross-base (13.2.0-12cross1) ... Setting up ruby-net-telnet (0.2.0-1) ... Setting up libc6-arm64-cross (2.37-12cross1) ... Setting up autopoint (0.21-14) ... Setting up d-shlibs (0.106) ... Setting up libitm1-arm64-cross (14-20240127-1cross1) ... Setting up autoconf (2.71-3) ... Setting up linux-libc-dev-arm64-cross (6.5.8-1cross1) ... Setting up ruby-webrick (1.8.1-1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up gcc-13-aarch64-linux-gnu-base:amd64 (13.2.0-12cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up openssl (3.1.5-1) ... Setting up libbsd0:amd64 (0.11.8-1) ... Setting up libelf1:amd64 (0.190-1+b1) ... Setting up ruby-xmlrpc (0.3.2-2) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-6+b1) ... Setting up libgcc-s1-arm64-cross (14-20240127-1cross1) ... Setting up libatomic1-arm64-cross (14-20240127-1cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblsan0-arm64-cross (14-20240127-1cross1) ... Setting up libgomp1-arm64-cross (14-20240127-1cross1) ... Setting up gettext (0.21-14+b1) ... Setting up cpp-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:amd64 (3.1-20230828-1) ... Setting up libhwasan0-arm64-cross (14-20240127-1cross1) ... Setting up libc6-dev-arm64-cross (2.37-12cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libstdc++6-arm64-cross (14-20240127-1cross1) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up cpp-aarch64-linux-gnu (4:13.2.0-7) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libasan8-arm64-cross (14-20240127-1cross1) ... Setting up libtsan2-arm64-cross (14-20240127-1cross1) ... Setting up libubsan1-arm64-cross (14-20240127-1cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up rubygems-integration (1.18) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-arm64-cross (13.2.0-12cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.13) ... Setting up gcc-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up libstdc++-13-dev-arm64-cross (13.2.0-12cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-13-aarch64-linux-gnu (13.2.0-12cross1) ... Setting up gcc-aarch64-linux-gnu (4:13.2.0-7) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-aarch64-linux-gnu (4:13.2.0-7) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-arm64 (12.10) ... Setting up libruby:amd64 (1:3.1) ... Setting up libgcc-s1:arm64 (14-20240201-3) ... Setting up libc6:arm64 (2.37-15) ... Setting up libhwasan0:arm64 (14-20240201-3) ... Setting up libbz2-1.0:arm64 (1.0.8-5+b2) ... Setting up libstdc++6:arm64 (14-20240201-3) ... Setting up liblsan0:arm64 (14-20240201-3) ... Setting up libitm1:arm64 (14-20240201-3) ... Setting up libtsan0:arm64 (11.4.0-7) ... Setting up ruby-sdbm:amd64 (1.0.0-5+b2) ... Setting up libruby3.1:amd64 (3.1.2-8) ... Setting up libkeyutils1:arm64 (1.6.3-3) ... Setting up libssl3:arm64 (3.1.5-1) ... Setting up zlib1g:arm64 (1:1.3.dfsg-3+b1) ... Setting up libcrypt1:arm64 (1:4.4.36-4) ... Setting up libcom-err2:arm64 (1.47.0-2+b1) ... Setting up libgomp1:arm64 (14-20240201-3) ... Setting up libasan6:arm64 (11.4.0-7) ... Setting up libkrb5support0:arm64 (1.20.1-5+b1) ... Setting up libatomic1:arm64 (14-20240201-3) ... Setting up libk5crypto3:arm64 (1.20.1-5+b1) ... Setting up libubsan1:arm64 (14-20240201-3) ... Setting up libgcc-11-dev:arm64 (11.4.0-7) ... Setting up ruby3.1 (3.1.2-8) ... Setting up libcrypt-dev:arm64 (1:4.4.36-4) ... Setting up libkrb5-3:arm64 (1.20.1-5+b1) ... Setting up ruby (1:3.1) ... Setting up ruby-asciidoctor (2.0.20-1) ... Setting up rake (13.0.6-3) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-5+b1) ... Setting up asciidoctor (2.0.20-1) ... Setting up libtirpc3:arm64 (1.3.4+ds-1) ... Setting up ruby-rubygems (3.4.20-1) ... Setting up libtirpc-dev:arm64 (1.3.4+ds-1) ... Setting up libnsl2:arm64 (1.3.0-3) ... Setting up libnsl-dev:arm64 (1.3.0-3) ... Setting up libc6-dev:arm64 (2.37-15) ... Setting up libbz2-dev:arm64 (1.0.8-5+b2) ... Setting up libstdc++-11-dev:arm64 (11.4.0-7) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3+b1) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64) Toolchain package versions: binutils_2.42-2 dpkg-dev_1.22.4 g++-11_11.4.0-7 g++-13_13.2.0-13 gcc-11_11.4.0-7 gcc-13_13.2.0-13 libc6-dev_2.37-15 libstdc++-11-dev_11.4.0-7 libstdc++-13-dev_13.2.0-13 libstdc++-13-dev-arm64-cross_13.2.0-12cross1 libstdc++6_14-20240201-3 libstdc++6-arm64-cross_14-20240127-1cross1 linux-libc-dev_6.6.15-2 Package versions: adduser_3.137 apt_2.7.11 asciidoctor_2.0.20-1 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-2 binutils-aarch64-linux-gnu_2.42-2 binutils-common_2.42-2 binutils-x86-64-linux-gnu_2.42-2 bsdextrautils_2.39.3-6 bsdutils_1:2.39.3-6 build-essential_12.10 bzip2_1.0.8-5+b2 ca-certificates_20240203 coreutils_9.4-3+b1 cpp_4:13.2.0-7 cpp-11_11.4.0-7 cpp-13_13.2.0-13 cpp-13-aarch64-linux-gnu_13.2.0-12cross1 cpp-13-x86-64-linux-gnu_13.2.0-13 cpp-aarch64-linux-gnu_4:13.2.0-7 cpp-x86-64-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-arm64_12.10 d-shlibs_0.106 dash_0.5.12-6 debconf_1.5.86 debhelper_13.13 debian-archive-keyring_2023.4 debianutils_5.16 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.4 dpkg-cross_2.6.20 dpkg-dev_1.22.4 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.33-1 file_1:5.45-2+b1 findutils_4.9.0-5 g++_4:13.2.0-7 g++-11_11.4.0-7 g++-13_13.2.0-13 g++-13-aarch64-linux-gnu_13.2.0-12cross1 g++-13-x86-64-linux-gnu_13.2.0-13 g++-aarch64-linux-gnu_4:13.2.0-7 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-11_11.4.0-7 gcc-11-base_11.4.0-7 gcc-12-base_12.3.0-14 gcc-13_13.2.0-13 gcc-13-aarch64-linux-gnu_13.2.0-12cross1 gcc-13-aarch64-linux-gnu-base_13.2.0-12cross1 gcc-13-base_13.2.0-13 gcc-13-cross-base_13.2.0-12cross1 gcc-13-x86-64-linux-gnu_13.2.0-13 gcc-14-base_14-20240201-3 gcc-14-cross-base_14-20240127-1cross1 gcc-9-base_9.5.0-5 gcc-aarch64-linux-gnu_4:13.2.0-7 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-1.1+b1 grep_3.11-4 groff-base_1.23.0-3 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libapt-pkg6.0_2.7.11 libarchive-zip-perl_1.68-1 libasan6_11.4.0-7 libasan8_14-20240201-3 libasan8-arm64-cross_14-20240127-1cross1 libatomic1_14-20240201-3 libatomic1-arm64-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2 libaudit1_1:3.1.2-2 libbinutils_2.42-2 libblkid1_2.39.3-6 libbsd0_0.11.8-1 libbz2-1.0_1.0.8-5+b2 libbz2-dev_1.0.8-5+b2 libc-bin_2.37-15 libc-dev-bin_2.37-15 libc6_2.37-15 libc6-arm64-cross_2.37-12cross1 libc6-dev_2.37-15 libc6-dev-arm64-cross_2.37-12cross1 libcap-ng0_0.8.4-2 libcap2_1:2.66-5 libcc1-0_14-20240201-3 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-2 libctf0_2.42-2 libdb5.3_5.3.28+dfsg2-4+b1 libdebconfclient0_0.271 libdebhelper-perl_13.13 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.4 libedit2_3.1-20230828-1 libelf1_0.190-1+b1 libext2fs2_1.47.0-2+b1 libfakeroot_1.33-1 libffi8_3.4.4-2 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.4.0-7 libgcc-13-dev_13.2.0-13 libgcc-13-dev-arm64-cross_13.2.0-12cross1 libgcc-s1_14-20240201-3 libgcc-s1-arm64-cross_14-20240127-1cross1 libgcrypt20_1.10.3-2 libgdbm-compat4_1.23-5+b1 libgdbm6_1.23-5+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30_3.8.3-1 libgomp1_14-20240201-3 libgomp1-arm64-cross_14-20240127-1cross1 libgpg-error0_1.47-3 libgprofng0_2.42-2 libgssapi-krb5-2_1.20.1-5+b1 libhogweed6_3.9.1-2 libhwasan0_14-20240201-3 libhwasan0-arm64-cross_14-20240127-1cross1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14-20240201-3 libitm1-arm64-cross_14-20240127-1cross1 libjansson4_2.14-2+b2 libk5crypto3_1.20.1-5+b1 libkeyutils1_1.6.3-3 libkrb5-3_1.20.1-5+b1 libkrb5support0_1.20.1-5+b1 liblocale-gettext-perl_1.07-6+b1 liblsan0_14-20240201-3 liblsan0-arm64-cross_14-20240127-1cross1 liblz4-1_1.9.4-1+b2 liblzma5_5.4.5-0.3 libmagic-mgc_1:5.45-2+b1 libmagic1_1:5.45-2+b1 libmd0_1.1.0-2 libmount1_2.39.3-6 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1 libncurses6_6.4+20240113-1 libnettle8_3.9.1-2 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.3-4 libpam-modules_1.5.2-9.1+b1 libpam-modules-bin_1.5.2-9.1+b1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1+b1 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.38_5.38.2-3 libpipeline1_1.5.7-1+b2 libquadmath0_14-20240201-3 libruby_1:3.1 libruby3.1_3.1.2-8 libseccomp2_2.5.5-1 libselinux1_3.5-2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b2 libsepol2_3.5-2 libsframe1_2.42-2 libsimde-dev_0.7.6-1 libsmartcols1_2.39.3-6 libss2_1.47.0-2+b1 libssl3_3.1.5-1 libstdc++-11-dev_11.4.0-7 libstdc++-13-dev_13.2.0-13 libstdc++-13-dev-arm64-cross_13.2.0-12cross1 libstdc++6_14-20240201-3 libstdc++6-arm64-cross_14-20240127-1cross1 libsub-override-perl_0.10-1 libsystemd0_255.3-2 libtasn1-6_4.19.0-3+b2 libtext-glob-perl_0.11-3 libtinfo6_6.4+20240113-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-7 libtsan2_14-20240201-3 libtsan2-arm64-cross_14-20240127-1cross1 libubsan1_14-20240201-3 libubsan1-arm64-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_255.3-2 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.3-6 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b2 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxxhash0_0.8.2-2+b1 libyaml-0-2_0.2.5-1 libyaml-perl_1.31-1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.6.15-2 linux-libc-dev-arm64-cross_6.5.8-1cross1 login_1:4.13+dfsg1-3+b1 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-3 mawk_1.3.4.20240123-1 mount_2.39.3-6 ncurses-base_6.4+20240113-1 ncurses-bin_6.4+20240113-1 openssl_3.1.5-1 passwd_1:4.13+dfsg1-3+b1 patch_2.7.6-7 perl_5.38.2-3 perl-base_5.38.2-3 perl-modules-5.34_5.34.0-5 perl-modules-5.38_5.38.2-3 po-debconf_1.0.21+nmu1 rake_13.0.6-3 rpcsvc-proto_1.4.3-1 ruby_1:3.1 ruby-asciidoctor_2.0.20-1 ruby-net-telnet_0.2.0-1 ruby-rubygems_3.4.20-1 ruby-sdbm_1.0.0-5+b2 ruby-webrick_1.8.1-1 ruby-xmlrpc_0.3.2-2 ruby3.1_3.1.2-8 rubygems-integration_1.18 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.08-6 tar_1.35+dfsg-3 tzdata_2024a-1 ucf_3.0043+nmu1 usrmerge_39 util-linux_2.39.3-6 util-linux-extra_2.39.3-6 xz-utils_5.4.5-0.3 zlib1g_1:1.3.dfsg-3+b1 zlib1g-dev_1:1.3.dfsg-3+b1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: kmc Binary: kmc, libkmc-dev Architecture: any Version: 3.2.4+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Jorge Soares , Sascha Steinbiss , Kevin Murray , Étienne Mollier Homepage: https://sun.aei.polsl.pl/kmc Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/kmc Vcs-Git: https://salsa.debian.org/med-team/kmc.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, help2man, asciidoctor, d-shlibs, libsimde-dev, debhelper Package-List: kmc deb science optional arch=any libkmc-dev deb libdevel optional arch=any Checksums-Sha1: 9c02956aeb8f9534ba9911c79ec9457e9e70c897 408640 kmc_3.2.4+dfsg.orig.tar.xz 48ef15ed4f22a2613367b8635927affcdc08b7b6 33888 kmc_3.2.4+dfsg-1.debian.tar.xz Checksums-Sha256: c3c662ed458eefe75d718a8b9c7c2d1c46853a5215694202e9e7f044eae70859 408640 kmc_3.2.4+dfsg.orig.tar.xz ee1347f791fac3abe653cd2dc9094a0683002a1eca7fc27a51d03e54ce6b6ac0 33888 kmc_3.2.4+dfsg-1.debian.tar.xz Files: d158fcb576dfb86b7746b6b54aadcfa6 408640 kmc_3.2.4+dfsg.orig.tar.xz 89dc9336e6f2b933f3f23a3b5e7e1542 33888 kmc_3.2.4+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEWzS6WqtVB+kDQm6F6NN64vCfSHIFAmXQvVsACgkQ6NN64vCf SHLSFw//amGp5aW8uZL6hrntmiJX+m2JqsYR3PpX07JqMGndcZkNxPwqZOBJYQKv MmOTBGue4r/pjux6faqTgJhq5ia6UP1n9726fJ83zuTRcqrcFRlq+eIZltHT1aJc c6XzpnWpYDfketOg/9UZzBILM9w6ZPtT0IIWjdbxxN7/+5FWDR8PWCKycne0HjOt 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from debian/patches/series dpkg-source: info: applying use-shared-libs dpkg-source: info: applying makefile.patch dpkg-source: info: applying 0005-Add-static-library-target-to-makefile.patch dpkg-source: info: applying disable-python-bindings.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying simde dpkg-source: info: applying support-mixed-march.patch dpkg-source: info: applying gcc-13.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.AgR0BkNxck/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-9ccd3fb6-2691-4a74-893b-0db9307bd70d SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package kmc dpkg-buildpackage: info: source version 3.2.4+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' make[1]: git: No such file or directory rm -f kmc_core/*.o rm -f kmc_api/*.o rm -f kmc_dump/*.o rm -f kmc_tools/*.o rm -f py_kmc_api/*.o rm -f py_kmc_api/*.so rm -rf bin rm -rf include rm -f libkmc.a make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars debian/files rm -fr -- debian/kmc/ debian/tmp/ debian/libkmc-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[2]: Entering directory '/<>' make[2]: git: No such file or directory aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_CLI/kmc.cpp -o kmc_CLI/kmc.o kmc_CLI/kmc.cpp: In function ‘bool parse_parameters(int, char**, Params&)’: kmc_CLI/kmc.cpp:267:36: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<__cxx11::basic_string*, vector<__cxx11::basic_string > >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 267 | std::random_shuffle(input_file_names.begin(), input_file_names.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from kmc_CLI/kmc.cpp:6: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/mem_disk_file.cpp -o kmc_core/mem_disk_file.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/rev_byte.cpp -o kmc_core/rev_byte.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/bkb_writer.cpp -o kmc_core/bkb_writer.o In file included from kmc_core/params.h:16, from kmc_core/bkb_writer.h:14, from kmc_core/bkb_writer.cpp:11: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/params.h:14: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/cpu_info.cpp -o kmc_core/cpu_info.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/bkb_reader.cpp -o kmc_core/bkb_reader.o In file included from kmc_core/params.h:16, from kmc_core/bkb_reader.h:15, from kmc_core/bkb_reader.cpp:11: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/params.h:14: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/fastq_reader.cpp -o kmc_core/fastq_reader.o In file included from kmc_core/params.h:16, from kmc_core/fastq_reader.h:15, from kmc_core/fastq_reader.cpp:12: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from kmc_core/fastq_reader.cpp:10: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/timer.cpp -o kmc_core/timer.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/develop.cpp -o kmc_core/develop.o In file included from kmc_core/params.h:16, from kmc_core/develop.cpp:3: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/develop.h:4, from kmc_core/develop.cpp:2: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kb_completer.cpp -o kmc_core/kb_completer.o In file included from kmc_core/params.h:16, from kmc_core/kb_completer.h:14, from kmc_core/kb_completer.cpp:12: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from kmc_core/kb_completer.cpp:10: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kb_storer.cpp -o kmc_core/kb_storer.o In file included from kmc_core/params.h:16, from kmc_core/kb_storer.h:15, from kmc_core/kb_storer.cpp:12: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from kmc_core/kb_storer.cpp:10: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kmer.cpp -o kmc_core/kmer.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/splitter.cpp -o kmc_core/splitter.o In file included from kmc_core/params.h:16, from kmc_core/kb_collector.h:15, from kmc_core/splitter.h:16, from kmc_core/splitter.cpp:11: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/splitter.h:14: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kb_collector.cpp -o kmc_core/kb_collector.o In file included from kmc_core/params.h:16, from kmc_core/kb_collector.h:15, from kmc_core/kb_collector.cpp:11: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/kb_collector.h:14: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kmc_runner.cpp -o kmc_core/kmc_runner.o In file included from kmc_core/params.h:16, from kmc_core/kmc.h:15, from kmc_core/kmc_runner.cpp:12: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from /usr/aarch64-linux-gnu/include/c++/13/ext/algorithm:63, from kmc_core/defs.h:112, from kmc_core/kmc.h:14: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ In file included from kmc_core/params.h:17: kmc_core/s_mapper.h: In member function ‘void CSignatureMapper::InitKMC(const std::string&)’: kmc_core/s_mapper.h:62:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 62 | fread(&kmc_version, sizeof(uint32), 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_core/s_mapper.h:72:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 72 | fread(&header_offset, sizeof(uint32_t), 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_core/s_mapper.h:76:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 76 | fread(&lut_prefix_len, sizeof(uint32_t), 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_core/s_mapper.h:77:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 77 | fread(&sig_len, sizeof(uint32_t), 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_core/s_mapper.h:106:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 106 | fread(raw, 1, 4, file); | ~~~~~^~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/raduls_sse2.cpp -o kmc_core/raduls_sse2.o In file included from kmc_core/raduls_sse2.cpp:20: kmc_core/raduls_impl.h:766:2: warning: #warning "building raduls radix sort for neon" [-Wcpp] 766 | #warning "building raduls radix sort for neon" | ^~~~~~~ In file included from kmc_core/first_dispatch.h:13, from kmc_core/raduls_impl.h:24: kmc_core/queues.h: In member function ‘void CBinDesc::init_random()’: kmc_core/queues.h:593:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 593 | random_shuffle(random_bins.begin(), random_bins.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/c++/13/algorithm:61, from kmc_core/raduls_impl.h:19: /usr/aarch64-linux-gnu/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_api/mmer.cpp -o kmc_api/mmer.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_api/kmc_file.cpp -o kmc_api/kmc_file.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_api/kmer_api.cpp -o kmc_api/kmer_api.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_core/kff_writer.cpp -o kmc_core/kff_writer.o mkdir -p include cp kmc_core/kmc_runner.h include/kmc_runner.h mkdir -p bin ar rcs bin/libkmc_core.a kmc_core/mem_disk_file.o kmc_core/rev_byte.o kmc_core/bkb_writer.o kmc_core/cpu_info.o kmc_core/bkb_reader.o kmc_core/fastq_reader.o kmc_core/timer.o kmc_core/develop.o kmc_core/kb_completer.o kmc_core/kb_storer.o kmc_core/kmer.o kmc_core/splitter.o kmc_core/kb_collector.o kmc_core/kmc_runner.o kmc_core/raduls_sse2.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o kmc_core/kff_writer.o mkdir -p bin aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -Wl,-z,relro -Wl,-z,now -lm -O3 -std=c++14 -lz -o bin/kmc kmc_CLI/kmc.o bin/libkmc_core.a -lz aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_dump/nc_utils.cpp -o kmc_dump/nc_utils.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_dump/kmc_dump.cpp -o kmc_dump/kmc_dump.o mkdir -p bin aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -Wl,-z,relro -Wl,-z,now -lm -O3 -std=c++14 -lz -o bin/kmc_dump kmc_dump/nc_utils.o kmc_dump/kmc_dump.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/kmer_file_header.cpp -o kmc_tools/kmer_file_header.o kmc_tools/kmer_file_header.cpp: In member function ‘bool CKmerFileHeader::is_kff_file(std::string&)’: kmc_tools/kmer_file_header.cpp:117:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 117 | fread(marker_start, 1, 3, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kmer_file_header.cpp:120:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | fread(marker_end, 1, 3, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/kmc_tools.cpp -o kmc_tools/kmc_tools.o In file included from kmc_tools/db_reader_factory.h:8, from kmc_tools/expression_node.h:19, from kmc_tools/parser.h:14, from kmc_tools/kmc_tools.cpp:17: kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 8]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from kmc_tools/kmc_tools.cpp:16: kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 8]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 7]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 7]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 6]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 6]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 5]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 5]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 4]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 4]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 3]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 3]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 2]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 2]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_db_reader.h: In member function ‘bool CKFFDbReaderSeq::reload_buff() [with unsigned int SIZE = 1]’: kmc_tools/kff_db_reader.h:1377:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1377 | fread(buff, 1, buff_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In member function ‘void CKmerCheck::get_lower_upper(uint64, CKmer&, uint64&, uint64&) [with unsigned int SIZE = 1]’: kmc_tools/check_kmer.h:97:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:101:38: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:131:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 131 | fread(&prefix_array, sizeof(uint32), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:136:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lower, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h:137:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(&upper, sizeof(uint64), 1, prefix_file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:53:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 53 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/check_kmer.h: In lambda function: kmc_tools/check_kmer.h:273:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | fread(tmp, 1, record_size, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/nc_utils.cpp -o kmc_tools/nc_utils.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/parameters_parser.cpp -o kmc_tools/parameters_parser.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/parser.cpp -o kmc_tools/parser.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/tokenizer.cpp -o kmc_tools/tokenizer.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/fastq_filter.cpp -o kmc_tools/fastq_filter.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/fastq_reader.cpp -o kmc_tools/fastq_reader.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/fastq_writer.cpp -o kmc_tools/fastq_writer.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/percent_progress.cpp -o kmc_tools/percent_progress.o aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -c kmc_tools/kff_info_reader.cpp -o kmc_tools/kff_info_reader.o kmc_tools/kff_info_reader.cpp: In constructor ‘CKFFInfoReader::CKFFInfoReader(const std::string&)’: kmc_tools/kff_info_reader.cpp:35:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 35 | fread(marker, 1, 3, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:40:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 40 | fread(marker, 1, 3, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:46:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 46 | fread(footer_size_str, 1, 12, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:55:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:62:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 62 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:68:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 68 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:77:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 77 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:90:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 90 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:93:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 93 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:97:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:100:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 100 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:106:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 106 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:112:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 112 | fread(tmp.data(), 1, sizeof(free_size), file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:117:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 117 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:137:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 137 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:142:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 142 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:151:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 151 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:155:30: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:162:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 162 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:174:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 174 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:183:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 183 | fread(tmp.data(), 1, 1, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp: In member function ‘void CKFFInfoReader::ReadVariableSection()’: kmc_tools/kff_info_reader.cpp:208:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 208 | fread(tmp.data(), 1, sizeof(uint64_t), file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:215:22: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 215 | fread(tmp.data(), 1, sizeof(uint64_t), file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp: In member function ‘void CKFFInfoReader::ReadRawSection()’: kmc_tools/kff_info_reader.cpp:254:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 254 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp: In member function ‘void CKFFInfoReader::ReadMinimizerSection()’: kmc_tools/kff_info_reader.cpp:289:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | fread(data_section.minimizer.data(), 1, minimizer_bytes, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ kmc_tools/kff_info_reader.cpp:291:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 291 | fread(tmp.data(), 1, 8, file); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p bin aarch64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -fsigned-char -std=c++14 -Wl,-z,relro -Wl,-z,now -lm -O3 -std=c++14 -lz -o bin/kmc_tools kmc_tools/kmer_file_header.o kmc_tools/kmc_tools.o kmc_tools/nc_utils.o kmc_tools/parameters_parser.o kmc_tools/parser.o kmc_tools/tokenizer.o kmc_tools/fastq_filter.o kmc_tools/fastq_reader.o kmc_tools/fastq_writer.o kmc_tools/percent_progress.o kmc_tools/kff_info_reader.o kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o kmc_core/kff_writer.o -lz ar rcs libkmc.a kmc_api/mmer.o kmc_api/kmc_file.o kmc_api/kmer_api.o ranlib libkmc.a make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/kmc.substvars debian/libkmc-dev.substvars rm -fr -- debian/.debhelper/generated/kmc/ debian/kmc/ debian/tmp/ debian/.debhelper/generated/libkmc-dev/ debian/libkmc-dev/ dh_auto_install -a install -m0755 -d /<>/kmc-3.2.4\+dfsg/debian/tmp dh_install -a install -m0755 -d debian/kmc/usr/bin cp --reflink=auto -a ./bin/kmc ./bin/kmc_dump ./bin/kmc_tools debian/kmc/usr/bin/ install -m0755 -d debian/libkmc-dev/usr/include/kmc cp --reflink=auto -a ./kmc_api/kmc_file.h ./kmc_api/kmer_api.h ./kmc_api/kmer_defs.h ./kmc_api/mmer.h debian/libkmc-dev/usr/include/kmc/ install -m0755 -d debian/libkmc-dev/usr/lib/aarch64-linux-gnu cp --reflink=auto -a ./bin/libkmc_core.a ./libkmc.a debian/libkmc-dev/usr/lib/aarch64-linux-gnu/ dh_installdocs -a install -m0755 -d debian/kmc/usr/share/doc/kmc install -p -m0644 debian/TODO debian/kmc/usr/share/doc/kmc/TODO.Debian install -p -m0644 debian/copyright debian/kmc/usr/share/doc/kmc/copyright install -m0755 -d debian/libkmc-dev/usr/share/doc/libkmc-dev install -p -m0644 debian/copyright debian/libkmc-dev/usr/share/doc/libkmc-dev/copyright dh_installchangelogs -a install -m0755 -d debian/kmc/usr/share/doc/kmc install -p -m0644 debian/.debhelper/generated/kmc/dh_installchangelogs.dch.trimmed debian/kmc/usr/share/doc/kmc/changelog.Debian install -m0755 -d debian/libkmc-dev/usr/share/doc/libkmc-dev install -p -m0644 debian/.debhelper/generated/libkmc-dev/dh_installchangelogs.dch.trimmed debian/libkmc-dev/usr/share/doc/libkmc-dev/changelog.Debian rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>' mkdir -p /<>/debian/man /<>/debian/usage_to_man Creating manpages Manpage creation complete Manpage creation complete asciidoctor -a docdate='' -b manpage /<>/debian/man_src/*.adoc cp /<>/debian/man_src/*.? /<>/debian/man dh_installman -- install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./man/kmc.1 debian/kmc/usr/share/man/man1/kmc.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./man/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_dump.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 install -m0755 -d debian/kmc/usr/share/man/man1/ install -p -m0644 ./debian/man/kmc_tools.1 debian/kmc/usr/share/man/man1/kmc_tools.1 man-recode --to-code UTF-8 --suffix .dh-new debian/kmc/usr/share/man/man1/kmc.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools.1 mv debian/kmc/usr/share/man/man1/kmc.1.dh-new debian/kmc/usr/share/man/man1/kmc.1 mv debian/kmc/usr/share/man/man1/kmc_dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_dump.1 mv debian/kmc/usr/share/man/man1/kmc_tools-compact.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-compact.1 mv debian/kmc/usr/share/man/man1/kmc_tools-complex.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-complex.1 mv debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 mv debian/kmc/usr/share/man/man1/kmc_tools-dump.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-dump.1 mv debian/kmc/usr/share/man/man1/kmc_tools-filter.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-filter.1 mv debian/kmc/usr/share/man/man1/kmc_tools-histogram.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 mv debian/kmc/usr/share/man/man1/kmc_tools-intersect.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 mv debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 mv debian/kmc/usr/share/man/man1/kmc_tools-sort.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-sort.1 mv debian/kmc/usr/share/man/man1/kmc_tools-union.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools-union.1 mv debian/kmc/usr/share/man/man1/kmc_tools.1.dh-new debian/kmc/usr/share/man/man1/kmc_tools.1 chmod 0644 -- debian/kmc/usr/share/man/man1/kmc.1 debian/kmc/usr/share/man/man1/kmc_dump.1 debian/kmc/usr/share/man/man1/kmc_tools-compact.1 debian/kmc/usr/share/man/man1/kmc_tools-complex.1 debian/kmc/usr/share/man/man1/kmc_tools-counters_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-dump.1 debian/kmc/usr/share/man/man1/kmc_tools-filter.1 debian/kmc/usr/share/man/man1/kmc_tools-histogram.1 debian/kmc/usr/share/man/man1/kmc_tools-intersect.1 debian/kmc/usr/share/man/man1/kmc_tools-kmers_subtract.1 debian/kmc/usr/share/man/man1/kmc_tools-sort.1 debian/kmc/usr/share/man/man1/kmc_tools-union.1 debian/kmc/usr/share/man/man1/kmc_tools.1 make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/kmc chmod a-x usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 gzip -9nf usr/share/doc/kmc/changelog.Debian usr/share/man/man1/kmc.1 usr/share/man/man1/kmc_dump.1 usr/share/man/man1/kmc_tools-compact.1 usr/share/man/man1/kmc_tools-complex.1 usr/share/man/man1/kmc_tools-counters_subtract.1 usr/share/man/man1/kmc_tools-dump.1 usr/share/man/man1/kmc_tools-filter.1 usr/share/man/man1/kmc_tools-histogram.1 usr/share/man/man1/kmc_tools-intersect.1 usr/share/man/man1/kmc_tools-kmers_subtract.1 usr/share/man/man1/kmc_tools-sort.1 usr/share/man/man1/kmc_tools-union.1 usr/share/man/man1/kmc_tools.1 cd '/<>' cd debian/libkmc-dev chmod a-x usr/share/doc/libkmc-dev/changelog.Debian gzip -9nf usr/share/doc/libkmc-dev/changelog.Debian cd '/<>' dh_fixperms -a find debian/kmc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/kmc/usr/share/doc -type f -a -true -a ! -regex 'debian/kmc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/kmc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/kmc/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libkmc-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libkmc-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libkmc-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libkmc-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libkmc-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_dwz -a install -m0755 -d debian/kmc/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/kmc/usr/lib/debug/.dwz/aarch64-linux-gnu/kmc.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/kmc.debug -- debian/kmc/usr/bin/kmc debian/kmc/usr/bin/kmc_dump debian/kmc/usr/bin/kmc_tools aarch64-linux-gnu-objcopy --compress-debug-sections debian/kmc/usr/lib/debug/.dwz/aarch64-linux-gnu/kmc.debug chmod 0644 -- debian/kmc/usr/lib/debug/.dwz/aarch64-linux-gnu/kmc.debug dh_strip -a install -m0755 -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/4d aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/4d/0684169f14f6fbe9ffefad01e8dc2fe76ff3e3.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/4d/0684169f14f6fbe9ffefad01e8dc2fe76ff3e3.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/4d/0684169f14f6fbe9ffefad01e8dc2fe76ff3e3.debug debian/kmc/usr/bin/kmc install -m0755 -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_tools debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/cf977f857637597690169394a81e7df1f110a7.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/cf977f857637597690169394a81e7df1f110a7.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_tools aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/cf977f857637597690169394a81e7df1f110a7.debug debian/kmc/usr/bin/kmc_tools install -m0755 -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/kmc/usr/bin/kmc_dump debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/7e09144456b2a7e35d63eef0520a2626b81db8.debug chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/7e09144456b2a7e35d63eef0520a2626b81db8.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/kmc/usr/bin/kmc_dump aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.build-id/18/7e09144456b2a7e35d63eef0520a2626b81db8.debug debian/kmc/usr/bin/kmc_dump install -m0755 -d debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/kmc/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/kmc/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/kmc/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/kmc/usr/lib/debug install -m0755 -d debian/.debhelper/kmc/dbgsym-root/usr/share/doc ln -s kmc debian/.debhelper/kmc/dbgsym-root/usr/share/doc/kmc-dbgsym install -m0755 -d debian/.debhelper/kmc aarch64-linux-gnu-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libkmc-dev/usr/lib/aarch64-linux-gnu/libkmc.a aarch64-linux-gnu-strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libkmc-dev/usr/lib/aarch64-linux-gnu/libkmc_core.a dh_makeshlibs -a rm -f debian/kmc/DEBIAN/shlibs rm -f debian/libkmc-dev/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/kmc/DEBIAN dpkg-shlibdeps -Tdebian/kmc.substvars debian/kmc/usr/bin/kmc debian/kmc/usr/bin/kmc_tools debian/kmc/usr/bin/kmc_dump dh_installdeb -a install -m0755 -d debian/kmc/DEBIAN install -m0755 -d debian/libkmc-dev/DEBIAN rm -f debian/kmc.debhelper.log debian/libkmc-dev.debhelper.log debian/rules override_dh_gencontrol make[1]: Entering directory '/<>' dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.7.6-1), " install -m0755 -d debian/kmc/DEBIAN echo misc:Depends= >> debian/kmc.substvars echo misc:Pre-Depends= >> debian/kmc.substvars install -m0755 -d debian/.debhelper/kmc/dbgsym-root/DEBIAN dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/.debhelper/kmc/dbgsym-root "-Vsimde:Built-Using=simde (= 0.7.6-1), " -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=kmc-dbgsym "-DDepends=kmc (= \${binary:Version})" "-DDescription=debug symbols for kmc" "-DBuild-Ids=187e09144456b2a7e35d63eef0520a2626b81db8 18cf977f857637597690169394a81e7df1f110a7 4d0684169f14f6fbe9ffefad01e8dc2fe76ff3e3" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/control dpkg-gencontrol -pkmc -ldebian/changelog -Tdebian/kmc.substvars -Pdebian/kmc "-Vsimde:Built-Using=simde (= 0.7.6-1), " chmod 0644 -- debian/kmc/DEBIAN/control install -m0755 -d debian/libkmc-dev/DEBIAN echo misc:Depends= >> debian/libkmc-dev.substvars echo misc:Pre-Depends= >> debian/libkmc-dev.substvars dpkg-gencontrol -plibkmc-dev -ldebian/changelog -Tdebian/libkmc-dev.substvars -Pdebian/libkmc-dev "-Vsimde:Built-Using=simde (= 0.7.6-1), " dpkg-gencontrol: warning: Depends field of package libkmc-dev: substitution variable ${shlibs:Depends} used, but is not defined chmod 0644 -- debian/libkmc-dev/DEBIAN/control make[1]: Leaving directory '/<>' dh_md5sums -a install -m0755 -d debian/kmc/DEBIAN cd debian/kmc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/kmc/DEBIAN/md5sums install -m0755 -d debian/.debhelper/kmc/dbgsym-root/DEBIAN cd debian/.debhelper/kmc/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/kmc/dbgsym-root/DEBIAN/md5sums install -m0755 -d debian/libkmc-dev/DEBIAN cd debian/libkmc-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libkmc-dev/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/kmc .. dpkg-deb: building package 'kmc' in '../kmc_3.2.4+dfsg-1_arm64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/kmc/dbgsym-root .. dpkg-deb: building package 'kmc-dbgsym' in '../kmc-dbgsym_3.2.4+dfsg-1_arm64.deb'. dpkg-deb --root-owner-group --build debian/libkmc-dev .. dpkg-deb: building package 'libkmc-dev' in '../libkmc-dev_3.2.4+dfsg-1_arm64.deb'. dpkg-genbuildinfo --build=any -O../kmc_3.2.4+dfsg-1_arm64.buildinfo dpkg-genchanges --build=any -O../kmc_3.2.4+dfsg-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-02-18T09:49:48Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ kmc_3.2.4+dfsg-1_arm64.changes: ------------------------------- Format: 1.8 Date: Sat, 17 Feb 2024 15:01:25 +0100 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Built-For-Profiles: cross nocheck Architecture: arm64 Version: 3.2.4+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: kmc - count kmers in genomic sequences libkmc-dev - library to access KMC k-mer count files Changes: kmc (3.2.4+dfsg-1) unstable; urgency=medium . * New upstream version. Checksums-Sha1: 3d7cd16f6e6344dc0e1102d07b4f016b72bc058f 17324148 kmc-dbgsym_3.2.4+dfsg-1_arm64.deb 9f77e4419ee49c5681ba96cd8f4cc39c646746b3 7015 kmc_3.2.4+dfsg-1_arm64.buildinfo c0ec941acf95f8228745e056827ed0c8eb948e04 841816 kmc_3.2.4+dfsg-1_arm64.deb 11f422eb9c60f88b5e49d2cc93a3f7f9afe5116e 574764 libkmc-dev_3.2.4+dfsg-1_arm64.deb Checksums-Sha256: 63409e93c24d566c2c7012e09cfc3e6b588508f89725b3bb0ba6e5dba69c7eaf 17324148 kmc-dbgsym_3.2.4+dfsg-1_arm64.deb 62656ec3e102c2196801c490b2b1bcbf8073c52f47729c9da6eec1d6e02bc9f8 7015 kmc_3.2.4+dfsg-1_arm64.buildinfo ee792a4b1b426e142036b4d5e6930e93c50ec315363beb119cd2e520f8858f1d 841816 kmc_3.2.4+dfsg-1_arm64.deb 843c03ffbb05a09bf8aaaafd77f790d51abad9114ef9eb6e7de6a2f687ee4759 574764 libkmc-dev_3.2.4+dfsg-1_arm64.deb Files: 1f971491a03a809a057fb000a79450f9 17324148 debug optional kmc-dbgsym_3.2.4+dfsg-1_arm64.deb 40a5415dd33e5b195b19c1656e5e0af2 7015 science optional kmc_3.2.4+dfsg-1_arm64.buildinfo 29574badeb24ec83b2b919967ceeb2a9 841816 science optional kmc_3.2.4+dfsg-1_arm64.deb 867bf278ef13f22ec48a800f852cfd78 574764 libdevel optional libkmc-dev_3.2.4+dfsg-1_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: kmc Binary: kmc kmc-dbgsym libkmc-dev Architecture: arm64 Version: 3.2.4+dfsg-1 Checksums-Md5: 1f971491a03a809a057fb000a79450f9 17324148 kmc-dbgsym_3.2.4+dfsg-1_arm64.deb 29574badeb24ec83b2b919967ceeb2a9 841816 kmc_3.2.4+dfsg-1_arm64.deb 867bf278ef13f22ec48a800f852cfd78 574764 libkmc-dev_3.2.4+dfsg-1_arm64.deb Checksums-Sha1: 3d7cd16f6e6344dc0e1102d07b4f016b72bc058f 17324148 kmc-dbgsym_3.2.4+dfsg-1_arm64.deb c0ec941acf95f8228745e056827ed0c8eb948e04 841816 kmc_3.2.4+dfsg-1_arm64.deb 11f422eb9c60f88b5e49d2cc93a3f7f9afe5116e 574764 libkmc-dev_3.2.4+dfsg-1_arm64.deb Checksums-Sha256: 63409e93c24d566c2c7012e09cfc3e6b588508f89725b3bb0ba6e5dba69c7eaf 17324148 kmc-dbgsym_3.2.4+dfsg-1_arm64.deb ee792a4b1b426e142036b4d5e6930e93c50ec315363beb119cd2e520f8858f1d 841816 kmc_3.2.4+dfsg-1_arm64.deb 843c03ffbb05a09bf8aaaafd77f790d51abad9114ef9eb6e7de6a2f687ee4759 574764 libkmc-dev_3.2.4+dfsg-1_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 18 Feb 2024 09:49:48 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: adduser (= 3.137), apt (= 2.7.11), asciidoctor (= 2.0.20-1), autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.3), bash (= 5.2.21-2), binutils (= 2.42-2), binutils-common (= 2.42-2), binutils-x86-64-linux-gnu (= 2.42-2), bsdextrautils (= 2.39.3-6), bsdutils (= 1:2.39.3-6), build-essential (= 12.10), bzip2 (= 1.0.8-5+b2), ca-certificates (= 20240203), coreutils (= 9.4-3+b1), cpp (= 4:13.2.0-7), cpp-11 (= 11.4.0-7), cpp-13 (= 13.2.0-13), cpp-13-x86-64-linux-gnu (= 13.2.0-13), cpp-x86-64-linux-gnu (= 4:13.2.0-7), d-shlibs (= 0.106), dash (= 0.5.12-6), debconf (= 1.5.86), debhelper (= 13.13), debian-archive-keyring (= 2023.4), debianutils (= 5.16), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.4), dpkg-dev (= 1.22.4), dwz (= 0.15-1), file (= 1:5.45-2+b1), findutils (= 4.9.0-5), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-13), g++-13-x86-64-linux-gnu (= 13.2.0-13), g++-x86-64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-11 (= 11.4.0-7), gcc-11-base (= 11.4.0-7), gcc-13 (= 13.2.0-13), gcc-13-base (= 13.2.0-13), gcc-13-x86-64-linux-gnu (= 13.2.0-13), gcc-14-base (= 14-20240201-3), gcc-x86-64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), gpgv (= 2.2.40-1.1+b1), grep (= 3.11-4), groff-base (= 1.23.0-3), gzip (= 1.12-1), help2man (= 1.49.3), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-1), libapt-pkg6.0 (= 2.7.11), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.4.0-7), libasan8 (= 14-20240201-3), libatomic1 (= 14-20240201-3), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2), libaudit1 (= 1:3.1.2-2), libbinutils (= 2.42-2), libblkid1 (= 2.39.3-6), libbsd0 (= 0.11.8-1), libbz2-1.0 (= 1.0.8-5+b2), libbz2-dev (= 1.0.8-5+b2), libc-bin (= 2.37-15), libc-dev-bin (= 2.37-15), libc6 (= 2.37-15), libc6-dev (= 2.37-15), libcap-ng0 (= 0.8.4-2), libcap2 (= 1:2.66-5), libcc1-0 (= 14-20240201-3), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-2), libctf0 (= 2.42-2), libdb5.3 (= 5.3.28+dfsg2-4+b1), libdebconfclient0 (= 0.271), libdebhelper-perl (= 13.13), libdpkg-perl (= 1.22.4), libedit2 (= 3.1-20230828-1), libelf1 (= 0.190-1+b1), libffi8 (= 3.4.4-2), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.4.0-7), libgcc-13-dev (= 13.2.0-13), libgcc-s1 (= 14-20240201-3), libgcrypt20 (= 1.10.3-2), libgdbm-compat4 (= 1.23-5+b1), libgdbm6 (= 1.23-5+b1), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30 (= 3.8.3-1), libgomp1 (= 14-20240201-3), libgpg-error0 (= 1.47-3), libgprofng0 (= 2.42-2), libgssapi-krb5-2 (= 1.20.1-5+b1), libhogweed6 (= 3.9.1-2), libhwasan0 (= 14-20240201-3), libicu72 (= 72.1-4+b1), libidn2-0 (= 2.3.7-2), libisl23 (= 0.26-3+b2), libitm1 (= 14-20240201-3), libjansson4 (= 2.14-2+b2), libk5crypto3 (= 1.20.1-5+b1), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.20.1-5+b1), libkrb5support0 (= 1.20.1-5+b1), liblocale-gettext-perl (= 1.07-6+b1), liblsan0 (= 14-20240201-3), liblz4-1 (= 1.9.4-1+b2), liblzma5 (= 5.4.5-0.3), libmagic-mgc (= 1:5.45-2+b1), libmagic1 (= 1:5.45-2+b1), libmd0 (= 1.1.0-2), libmount1 (= 2.39.3-6), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1), libncurses6 (= 6.4+20240113-1), libnettle8 (= 3.9.1-2), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.25.3-4), libpam-modules (= 1.5.2-9.1+b1), libpam-modules-bin (= 1.5.2-9.1+b1), libpam-runtime (= 1.5.2-9.1), libpam0g (= 1.5.2-9.1+b1), libpcre2-8-0 (= 10.42-4), libperl5.38 (= 5.38.2-3), libpipeline1 (= 1.5.7-1+b2), libquadmath0 (= 14-20240201-3), libruby (= 1:3.1), libruby3.1 (= 3.1.2-8), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2), libsemanage-common (= 3.5-1), libsemanage2 (= 3.5-1+b2), libsepol2 (= 3.5-2), libsframe1 (= 2.42-2), libsimde-dev (= 0.7.6-1), libsmartcols1 (= 2.39.3-6), libssl3 (= 3.1.5-1), libstdc++-13-dev (= 13.2.0-13), libstdc++6 (= 14-20240201-3), libsub-override-perl (= 0.10-1), libsystemd0 (= 255.3-2), libtasn1-6 (= 4.19.0-3+b2), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20240113-1), libtirpc-common (= 1.3.4+ds-1), libtirpc-dev (= 1.3.4+ds-1), libtirpc3 (= 1.3.4+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-7), libtsan2 (= 14-20240201-3), libubsan1 (= 14-20240201-3), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 255.3-2), libunistring5 (= 1.1-2), libuuid1 (= 2.39.3-6), libxml2 (= 2.9.14+dfsg-1.3+b2), libxxhash0 (= 0.8.2-2+b1), libyaml-0-2 (= 0.2.5-1), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.6.15-2), login (= 1:4.13+dfsg1-3+b1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.0-3), mawk (= 1.3.4.20240123-1), ncurses-base (= 6.4+20240113-1), ncurses-bin (= 6.4+20240113-1), openssl (= 3.1.5-1), passwd (= 1:4.13+dfsg1-3+b1), patch (= 2.7.6-7), perl (= 5.38.2-3), perl-base (= 5.38.2-3), perl-modules-5.38 (= 5.38.2-3), po-debconf (= 1.0.21+nmu1), rake (= 13.0.6-3), rpcsvc-proto (= 1.4.3-1), ruby (= 1:3.1), ruby-asciidoctor (= 2.0.20-1), ruby-net-telnet (= 0.2.0-1), ruby-rubygems (= 3.4.20-1), ruby-sdbm (= 1.0.0-5+b2), ruby-webrick (= 1.8.1-1), ruby-xmlrpc (= 0.3.2-2), ruby3.1 (= 3.1.2-8), rubygems-integration (= 1.18), sed (= 4.9-2), sensible-utils (= 0.0.22), sysvinit-utils (= 3.08-6), tar (= 1.35+dfsg-3), usrmerge (= 39), util-linux (= 2.39.3-6), xz-utils (= 5.4.5-0.3), zlib1g (= 1:1.3.dfsg-3+b1), zlib1g-dev (= 1:1.3.dfsg-3+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1708178485" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ kmc-dbgsym_3.2.4+dfsg-1_arm64.deb --------------------------------- new Debian package, version 2.0. size 17324148 bytes: control archive=696 bytes. 448 bytes, 12 lines control 399 bytes, 4 lines md5sums Package: kmc-dbgsym Source: kmc Version: 3.2.4+dfsg-1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 18043 Depends: kmc (= 3.2.4+dfsg-1) Section: debug Priority: optional Description: debug symbols for kmc Build-Ids: 187e09144456b2a7e35d63eef0520a2626b81db8 18cf977f857637597690169394a81e7df1f110a7 4d0684169f14f6fbe9ffefad01e8dc2fe76ff3e3 drwxr-xr-x root/root 0 2024-02-17 14:01 ./ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/.build-id/18/ -rw-r--r-- root/root 124144 2024-02-17 14:01 ./usr/lib/debug/.build-id/18/7e09144456b2a7e35d63eef0520a2626b81db8.debug -rw-r--r-- root/root 7280080 2024-02-17 14:01 ./usr/lib/debug/.build-id/18/cf977f857637597690169394a81e7df1f110a7.debug drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/.build-id/4d/ -rw-r--r-- root/root 10939008 2024-02-17 14:01 ./usr/lib/debug/.build-id/4d/0684169f14f6fbe9ffefad01e8dc2fe76ff3e3.debug drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 117512 2024-02-17 14:01 ./usr/lib/debug/.dwz/aarch64-linux-gnu/kmc.debug drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-02-17 14:01 ./usr/share/doc/kmc-dbgsym -> kmc kmc_3.2.4+dfsg-1_arm64.deb -------------------------- new Debian package, version 2.0. size 841816 bytes: control archive=1736 bytes. 1615 bytes, 32 lines control 1316 bytes, 19 lines md5sums Package: kmc Version: 3.2.4+dfsg-1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 4012 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6) Built-Using: simde (= 0.7.6-1) Section: science Priority: optional Homepage: https://sun.aei.polsl.pl/kmc Description: count kmers in genomic sequences The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . Building de Bruijn graphs is a commonly used approach for genome assembly with data from second-generation sequencing. Unfortunately, sequencing errors (frequent in practice) result in huge memory requirements for de Bruijn graphs, as well as long build time. One of the popular approaches to handle this problem is filtering the input reads in such a way that unique k-mers (very likely obtained as a result of an error) are discarded. . Thus, KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows one to use KMC even on rather typical personal computers. When run on high-end servers (what is necessary for KMC competitors) it outperforms them in both memory requirements and speed of computation. The disk space necessary for computation is in order of the size of input data (usually it is smaller). drwxr-xr-x root/root 0 2024-02-17 14:01 ./ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/bin/ -rwxr-xr-x root/root 2366128 2024-02-17 14:01 ./usr/bin/kmc -rwxr-xr-x root/root 68064 2024-02-17 14:01 ./usr/bin/kmc_dump -rwxr-xr-x root/root 1642096 2024-02-17 14:01 ./usr/bin/kmc_tools drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/doc/kmc/ -rw-r--r-- root/root 66 2024-02-17 13:56 ./usr/share/doc/kmc/TODO.Debian -rw-r--r-- root/root 1846 2024-02-17 14:01 ./usr/share/doc/kmc/changelog.Debian.gz -rw-r--r-- root/root 1185 2024-02-17 13:56 ./usr/share/doc/kmc/copyright drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/man/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/man/man1/ -rw-r--r-- root/root 531 2024-02-17 14:01 ./usr/share/man/man1/kmc.1.gz -rw-r--r-- root/root 424 2024-02-17 14:01 ./usr/share/man/man1/kmc_dump.1.gz -rw-r--r-- root/root 835 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-compact.1.gz -rw-r--r-- root/root 1320 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-complex.1.gz -rw-r--r-- root/root 1012 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-counters_subtract.1.gz -rw-r--r-- root/root 862 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-dump.1.gz -rw-r--r-- root/root 1028 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-filter.1.gz -rw-r--r-- root/root 824 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-histogram.1.gz -rw-r--r-- root/root 970 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-intersect.1.gz -rw-r--r-- root/root 972 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-kmers_subtract.1.gz -rw-r--r-- root/root 880 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-sort.1.gz -rw-r--r-- root/root 950 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools-union.1.gz -rw-r--r-- root/root 1205 2024-02-17 14:01 ./usr/share/man/man1/kmc_tools.1.gz libkmc-dev_3.2.4+dfsg-1_arm64.deb --------------------------------- new Debian package, version 2.0. size 574764 bytes: control archive=980 bytes. 667 bytes, 19 lines control 532 bytes, 8 lines md5sums Package: libkmc-dev Source: kmc Version: 3.2.4+dfsg-1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 5790 Built-Using: simde (= 0.7.6-1) Section: libdevel Priority: optional Multi-Arch: same Homepage: https://sun.aei.polsl.pl/kmc Description: library to access KMC k-mer count files The kmc software is designed for counting k-mers (sequences of consecutive k symbols) in a set of reads. K-mer counting is important for many bioinformatics applications, e.g. developing de Bruijn graph assemblers. . This package contains the C++ library headers for accessing kmc's output file format. drwxr-xr-x root/root 0 2024-02-17 14:01 ./ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/include/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/include/kmc/ -rw-r--r-- root/root 7665 2024-02-09 08:32 ./usr/include/kmc/kmc_file.h -rw-r--r-- root/root 19441 2024-02-09 08:32 ./usr/include/kmc/kmer_api.h -rw-r--r-- root/root 986 2024-02-09 08:32 ./usr/include/kmc/kmer_defs.h -rw-r--r-- root/root 5086 2024-02-09 08:32 ./usr/include/kmc/mmer.h drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 58634 2024-02-17 14:01 ./usr/lib/aarch64-linux-gnu/libkmc.a -rw-r--r-- root/root 5820878 2024-02-17 14:01 ./usr/lib/aarch64-linux-gnu/libkmc_core.a drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-02-17 14:01 ./usr/share/doc/libkmc-dev/ -rw-r--r-- root/root 1847 2024-02-17 14:01 ./usr/share/doc/libkmc-dev/changelog.Debian.gz -rw-r--r-- root/root 1185 2024-02-17 13:56 ./usr/share/doc/libkmc-dev/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1378 B] Get:5 copy:/<>/apt_archive ./ Packages [1457 B] Fetched 3450 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-libyaml-perl lintian lzop netbase patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-libyaml-perl lintian lzop netbase patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 123 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After this operation, 48.7 MB of additional disk space will be used. 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http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.76-1 [183 kB] Get:77 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:78 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:79 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:80 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:81 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:82 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:83 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.14-1 [38.5 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2+b1 [54.8 kB] Get:87 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2+b1 [35.6 kB] Get:88 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:89 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:90 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:92 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:94 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b4 [143 kB] Get:95 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:96 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3+b1 [11.2 kB] Get:97 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1+b1 [12.5 kB] Get:98 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:99 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:100 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b2 [17.5 kB] Get:101 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b1 [11.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1+b1 [42.2 kB] Get:103 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:104 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b1 [99.2 kB] Get:105 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b1 [102 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:107 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.39-1+b1 [57.5 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1+b1 [27.1 kB] Get:109 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b2 [24.7 kB] Get:110 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b2 [8704 B] Get:111 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b1 [13.0 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b3 [174 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b2 [72.7 kB] Get:115 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2+b1 [20.3 kB] Get:116 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.18-1 [114 kB] Get:117 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.89+ds-1 [34.7 kB] Get:118 http://localhost:3142/debian sid/main amd64 plzip amd64 1.11-1 [63.9 kB] Get:119 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:120 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:121 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:123 http://localhost:3142/debian sid/main amd64 lintian all 2.117.0 [1052 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.1 MB in 0s (98.7 MB/s) Selecting previously unselected package netbase. (Reading database ... 26441 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-3_all.deb ... Unpacking readline-common (8.2-3) ... Selecting previously unselected package diffstat. Preparing to unpack .../002-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../003-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../004-libreadline8_8.2-3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-3) ... Selecting previously unselected package gpgconf. Preparing to unpack .../005-gpgconf_2.2.40-1.1+b1_amd64.deb ... Unpacking gpgconf (2.2.40-1.1+b1) ... Selecting previously unselected package libsqlite3-0:amd64. 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Selecting previously unselected package lintian. Preparing to unpack .../121-lintian_2.117.0_all.deb ... Unpacking lintian (2.117.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:arm64. Preparing to unpack .../122-sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b3) ... Setting up liblz1:amd64 (1.14-1) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b2) ... Setting up plzip (1.11-1) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2+b1) ... Setting up libmouse-perl (2.5.10-1+b4) ... 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Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1+b1) ... Setting up gpgconf (2.2.40-1.1+b1) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up gpg (2.2.40-1.1+b1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b2) ... Setting up libcgi-pm-perl (4.61-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.76-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.18-1) ... Setting up liblwp-protocol-https-perl (6.13-1) ... Setting up lintian (2.117.0) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 338412 Build-Time: 286 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 15 Job: kmc_3.2.4+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: kmc Package-Time: 313 Source-Version: 3.2.4+dfsg-1 Space: 338412 Status: successful Version: 3.2.4+dfsg-1 -------------------------------------------------------------------------------- Finished at 2024-02-18T09:49:48Z Build needed 00:05:13, 338412k disk space