sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley

+==============================================================================+
| kraken2 2.1.3-1 (armhf)                      Sat, 13 Apr 2024 18:30:08 +0000 |
+==============================================================================+

Package: kraken2
Version: 2.1.3-1
Source Version: 2.1.3-1
Distribution: unstable
Machine Architecture: amd64
Host Architecture: armhf
Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-a9321cef-c653-4104-a596-4e0915d1e204' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/kraken2-znQlC6/resolver-YJyjv3' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://localhost:3142/debian sid InRelease [198 kB]
Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB]
Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB]
Get:4 http://localhost:3142/debian sid/main Sources T-2024-04-13-1404.47-F-2024-04-13-0205.51.pdiff [15.2 kB]
Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-04-13-1404.47-F-2024-04-13-0205.51.pdiff [23.9 kB]
Get:4 http://localhost:3142/debian sid/main Sources T-2024-04-13-1404.47-F-2024-04-13-0205.51.pdiff [15.2 kB]
Get:6 http://localhost:3142/debian sid/main armhf Packages [9446 kB]
Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-04-13-1404.47-F-2024-04-13-0205.51.pdiff [23.9 kB]
Fetched 9811 kB in 3s (3373 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'kraken2' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/kraken2.git
Please use:
git clone https://salsa.debian.org/med-team/kraken2.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 560 kB of source archives.
Get:1 http://localhost:3142/debian sid/main kraken2 2.1.3-1 (dsc) [1973 B]
Get:2 http://localhost:3142/debian sid/main kraken2 2.1.3-1 (tar) [219 kB]
Get:3 http://localhost:3142/debian sid/main kraken2 2.1.3-1 (diff) [339 kB]
Fetched 560 kB in 1s (422 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/kraken2-znQlC6/kraken2-2.1.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/kraken2-znQlC6' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf
Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-armhf:amd64, libc-dev:armhf, libstdc++-dev:armhf
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [726 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [769 B]
Fetched 2104 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
Execute external solver...
The following packages were automatically installed and are no longer required:
  mount tzdata
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf
  bsdextrautils cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf
  cross-config crossbuild-essential-armhf debhelper dh-autoreconf
  dh-strip-nondeterminism dpkg-cross dwz fakeroot file
  g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf
  gcc-13-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf-base gcc-13-base:armhf
  gcc-13-cross-base gcc-14-base:armhf gcc-14-cross-base
  gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf
  libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf
  libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl
  libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl
  libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armhf
  libgcc-13-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross
  libgomp1:armhf libgomp1-armhf-cross libicu72 libio-string-perl
  liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1
  libstdc++-13-dev:armhf libstdc++-13-dev-armhf-cross libstdc++6:armhf
  libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf
  libubsan1-armhf-cross libuchardet0 libxml-libxml-perl
  libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
  libxml-simple-perl libxml2 libyaml-perl m4 man-db po-debconf sensible-utils
  ucf zlib1g:armhf zlib1g-dev:armhf
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales
  cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex
  bison gdb-arm-linux-gnueabihf gcc-doc gettext-doc libasprintf-dev
  libgettextpo-dev groff glibc-doc:armhf libc-l10n:armhf locales:armhf
  libnss-nis:armhf libnss-nisplus:armhf manpages-dev:armhf
  libstdc++-13-doc:armhf libtool-doc gfortran | fortran95-compiler gcj-jdk
  libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx libidn2-0:armhf libarchive-cpio-perl libltdl-dev
  libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev binutils-arm-linux-gnueabihf
  bsdextrautils cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf
  cross-config crossbuild-essential-armhf debhelper dh-autoreconf
  dh-strip-nondeterminism dpkg-cross dwz fakeroot file
  g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf
  gcc-13-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf-base gcc-13-base:armhf
  gcc-13-cross-base gcc-14-base:armhf gcc-14-cross-base
  gcc-arm-linux-gnueabihf gettext gettext-base groff-base intltool-debian
  libarchive-zip-perl libasan8:armhf libasan8-armhf-cross libatomic1:armhf
  libatomic1-armhf-cross libc6:armhf libc6-armhf-cross libc6-dev:armhf
  libc6-dev-armhf-cross libconfig-auto-perl libconfig-inifiles-perl
  libcrypt-dev:armhf libcrypt1:armhf libdebhelper-perl
  libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl
  libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:armhf
  libgcc-13-dev-armhf-cross libgcc-s1:armhf libgcc-s1-armhf-cross
  libgomp1:armhf libgomp1-armhf-cross libicu72 libio-string-perl
  liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1
  libstdc++-13-dev:armhf libstdc++-13-dev-armhf-cross libstdc++6:armhf
  libstdc++6-armhf-cross libsub-override-perl libtool libubsan1:armhf
  libubsan1-armhf-cross libuchardet0 libxml-libxml-perl
  libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl
  libxml-simple-perl libxml2 libyaml-perl m4 man-db po-debconf
  sbuild-build-depends-main-dummy:armhf sensible-utils ucf zlib1g:armhf
  zlib1g-dev:armhf
0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded.
Need to get 82.1 MB of archives.
After this operation, 315 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [928 B]
Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-7 [15.0 kB]
Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.22 [22.4 kB]
Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB]
Get:5 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB]
Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB]
Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-14+b1 [161 kB]
Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB]
Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB]
Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40-5 [92.1 kB]
Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB]
Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.1-1 [1411 kB]
Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB]
Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB]
Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB]
Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-14 [496 kB]
Get:19 http://localhost:3142/debian sid/main amd64 binutils-arm-linux-gnueabihf amd64 2.42-4 [3216 kB]
Get:20 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabihf-base amd64 13.2.0-12cross1 [42.6 kB]
Get:21 http://localhost:3142/debian sid/main amd64 cpp-13-arm-linux-gnueabihf amd64 13.2.0-12cross1 [9286 kB]
Get:22 http://localhost:3142/debian sid/main amd64 cpp-arm-linux-gnueabihf amd64 4:13.2.0-7 [4732 B]
Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB]
Get:24 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB]
Get:25 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB]
Get:26 http://localhost:3142/debian sid/main amd64 libc6-armhf-cross all 2.37-12cross1 [868 kB]
Get:27 http://localhost:3142/debian sid/main amd64 libgcc-s1-armhf-cross all 14-20240127-1cross1 [36.9 kB]
Get:28 http://localhost:3142/debian sid/main amd64 libgomp1-armhf-cross all 14-20240127-1cross1 [108 kB]
Get:29 http://localhost:3142/debian sid/main amd64 libatomic1-armhf-cross all 14-20240127-1cross1 [6768 B]
Get:30 http://localhost:3142/debian sid/main amd64 libasan8-armhf-cross all 14-20240127-1cross1 [2567 kB]
Get:31 http://localhost:3142/debian sid/main amd64 libstdc++6-armhf-cross all 14-20240127-1cross1 [560 kB]
Get:32 http://localhost:3142/debian sid/main amd64 libubsan1-armhf-cross all 14-20240127-1cross1 [1036 kB]
Get:33 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-armhf-cross all 13.2.0-12cross1 [783 kB]
Get:34 http://localhost:3142/debian sid/main amd64 gcc-13-arm-linux-gnueabihf amd64 13.2.0-12cross1 [17.8 MB]
Get:35 http://localhost:3142/debian sid/main amd64 gcc-arm-linux-gnueabihf amd64 4:13.2.0-7 [1452 B]
Get:36 http://localhost:3142/debian sid/main amd64 libc6-dev-armhf-cross all 2.37-12cross1 [1265 kB]
Get:37 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-armhf-cross all 13.2.0-12cross1 [2216 kB]
Get:38 http://localhost:3142/debian sid/main amd64 g++-13-arm-linux-gnueabihf amd64 13.2.0-12cross1 [10.2 MB]
Get:39 http://localhost:3142/debian sid/main amd64 g++-arm-linux-gnueabihf amd64 4:13.2.0-7 [1204 B]
Get:40 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB]
Get:41 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB]
Get:42 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB]
Get:43 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB]
Get:44 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB]
Get:45 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB]
Get:46 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB]
Get:47 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b3 [313 kB]
Get:48 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB]
Get:49 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.31-1 [64.8 kB]
Get:50 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB]
Get:51 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB]
Get:52 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB]
Get:53 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB]
Get:54 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB]
Get:55 http://localhost:3142/debian sid/main amd64 crossbuild-essential-armhf all 12.10 [3484 B]
Get:56 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB]
Get:57 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB]
Get:58 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB]
Get:59 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get:60 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.10-1 [10.6 kB]
Get:61 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:62 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:63 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB]
Get:64 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get:65 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-14+b1 [1301 kB]
Get:66 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:67 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get:68 http://localhost:3142/debian sid/main amd64 debhelper all 13.15.3 [901 kB]
Get:69 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.34-1 [28.9 kB]
Get:70 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.34-1 [74.0 kB]
Get:71 http://localhost:3142/debian sid/main armhf gcc-13-base armhf 13.2.0-23 [44.5 kB]
Get:72 http://localhost:3142/debian sid/main armhf gcc-14-base armhf 14-20240330-1 [43.2 kB]
Get:73 http://localhost:3142/debian sid/main armhf libgcc-s1 armhf 14-20240330-1 [36.8 kB]
Get:74 http://localhost:3142/debian sid/main armhf libc6 armhf 2.37-17 [2134 kB]
Get:75 http://localhost:3142/debian sid/main armhf libasan8 armhf 14-20240330-1 [2578 kB]
Get:76 http://localhost:3142/debian sid/main armhf libatomic1 armhf 14-20240330-1 [7044 B]
Get:77 http://localhost:3142/debian sid/main armhf libcrypt1 armhf 1:4.4.36-4 [96.1 kB]
Get:78 http://localhost:3142/debian sid/main armhf libcrypt-dev armhf 1:4.4.36-4 [125 kB]
Get:79 http://localhost:3142/debian sid/main armhf libc6-dev armhf 2.37-17 [1270 kB]
Get:80 http://localhost:3142/debian sid/main armhf libgomp1 armhf 14-20240330-1 [111 kB]
Get:81 http://localhost:3142/debian sid/main armhf libstdc++6 armhf 14-20240330-1 [607 kB]
Get:82 http://localhost:3142/debian sid/main armhf libubsan1 armhf 14-20240330-1 [1037 kB]
Get:83 http://localhost:3142/debian sid/main armhf libgcc-13-dev armhf 13.2.0-23 [781 kB]
Get:84 http://localhost:3142/debian sid/main armhf libstdc++-13-dev armhf 13.2.0-23 [2263 kB]
Get:85 http://localhost:3142/debian sid/main armhf zlib1g armhf 1:1.3.dfsg-3.1 [74.4 kB]
Get:86 http://localhost:3142/debian sid/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1 [904 kB]
debconf: delaying package configuration, since apt-utils is not installed
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update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
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Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Setting up cpp-arm-linux-gnueabihf (4:13.2.0-7) ...
Setting up libasan8-armhf-cross (14-20240127-1cross1) ...
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Setting up man-db (2.12.1-1) ...
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Setting up libxml-sax-perl (1.02+dfsg-3) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
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Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
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Setting up libconfig-auto-perl (0.44-2) ...
Setting up libdebian-dpkgcross-perl (2.6.20) ...
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Setting up libc6:armhf (2.37-17) ...
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Setting up zlib1g:armhf (1:1.3.dfsg-3.1) ...
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Setting up libgomp1:armhf (14-20240330-1) ...
Setting up libatomic1:armhf (14-20240330-1) ...
Setting up libubsan1:armhf (14-20240330-1) ...
Setting up libgcc-13-dev:armhf (13.2.0-23) ...
Setting up libcrypt-dev:armhf (1:4.4.36-4) ...
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Setting up libstdc++-13-dev:armhf (13.2.0-23) ...
Setting up zlib1g-dev:armhf (1:1.3.dfsg-3.1) ...
Setting up sbuild-build-depends-main-dummy:armhf (0.invalid.0) ...
Processing triggers for libc-bin (2.37-17) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64)
Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-23 gcc-13_13.2.0-23 libc6-dev_2.37-17 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-armhf-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-armhf-cross_14-20240127-1cross1 linux-libc-dev_6.7.9-2
Package versions: adduser_3.137 apt_2.9.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-4 binutils-arm-linux-gnueabihf_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40-5 bsdutils_1:2.40-5 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-23 cpp-13-arm-linux-gnueabihf_13.2.0-12cross1 cpp-13-x86-64-linux-gnu_13.2.0-23 cpp-arm-linux-gnueabihf_4:13.2.0-7 cpp-x86-64-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-armhf_12.10 dash_0.5.12-6 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.6 dpkg-cross_2.6.20 dpkg-dev_1.22.6 dwz_0.15-1+b1 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-5 g++_4:13.2.0-7 g++-13_13.2.0-23 g++-13-arm-linux-gnueabihf_13.2.0-12cross1 g++-13-x86-64-linux-gnu_13.2.0-23 g++-arm-linux-gnueabihf_4:13.2.0-7 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-23 gcc-13-arm-linux-gnueabihf_13.2.0-12cross1 gcc-13-arm-linux-gnueabihf-base_13.2.0-12cross1 gcc-13-base_13.2.0-23 gcc-13-cross-base_13.2.0-12cross1 gcc-13-x86-64-linux-gnu_13.2.0-23 gcc-14-base_14-20240330-1 gcc-14-cross-base_14-20240127-1cross1 gcc-arm-linux-gnueabihf_4:13.2.0-7 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-3 grep_3.11-4 groff-base_1.23.0-3+b1 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libapt-pkg6.0t64_2.9.0 libarchive-zip-perl_1.68-1 libasan8_14-20240330-1 libasan8-armhf-cross_14-20240127-1cross1 libatomic1_14-20240330-1 libatomic1-armhf-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libbinutils_2.42-4 libblkid1_2.40-5 libbz2-1.0_1.0.8-5.1 libc-bin_2.37-17 libc-dev-bin_2.37-17 libc6_2.37-17 libc6-armhf-cross_2.37-12cross1 libc6-dev_2.37-17 libc6-dev-armhf-cross_2.37-12cross1 libcap-ng0_0.8.4-2 libcap2_1:2.66-5 libcc1-0_14-20240330-1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libdb5.3t64_5.3.28+dfsg2-6 libdebconfclient0_0.271+b3 libdebhelper-perl_13.15.3 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.6 libelf1t64_0.191-1+b1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-23 libgcc-13-dev-armhf-cross_13.2.0-12cross1 libgcc-s1_14-20240330-1 libgcc-s1-armhf-cross_14-20240127-1cross1 libgcrypt20_1.10.3-2 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-2 libgomp1_14-20240330-1 libgomp1-armhf-cross_14-20240127-1cross1 libgpg-error0_1.47-3 libgprofng0_2.42-4 libhogweed6t64_3.9.1-2.2 libhwasan0_14-20240330-1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14-20240330-1 libjansson4_2.14-2+b2 liblocale-gettext-perl_1.07-7 liblsan0_14-20240330-1 liblz4-1_1.9.4-2 liblzma5_5.6.1+really5.4.5-1 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40-5 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnettle8t64_3.9.1-2.2 libp11-kit0_0.25.3-4 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0t64_1.5.3-4 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-3.2+b2 libpipeline1_1.5.7-2 libquadmath0_14-20240330-1 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsemanage-common_3.5-1 libsemanage2_3.5-1+b3 libsepol2_3.5-2 libsframe1_2.42-4 libsmartcols1_2.40-5 libssl3t64_3.2.1-3 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-armhf-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-armhf-cross_14-20240127-1cross1 libsub-override-perl_0.10-1 libsystemd0_255.4-1+b1 libtasn1-6_4.19.0-3+b2 libtinfo6_6.4+20240113-1 libtool_2.4.7-7 libtsan2_14-20240330-1 libubsan1_14-20240330-1 libubsan1-armhf-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_255.4-1+b1 libunistring5_1.2-1 libuuid1_2.40-5 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b3 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.7.9-2 login_1:4.13+dfsg1-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 mount_2.40-5 ncurses-base_6.4+20240113-1 ncurses-bin_6.4+20240113-1 passwd_1:4.13+dfsg1-4 patch_2.7.6-7 perl_5.38.2-3.2+b2 perl-base_5.38.2-3.2+b2 perl-modules-5.38_5.38.2-3.2 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.08-7 tar_1.35+dfsg-3 tzdata_2024a-2 ucf_3.0043+nmu1 usr-is-merged_39 util-linux_2.40-5 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1 zlib1g-dev_1:1.3.dfsg-3.1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: kraken2
Binary: kraken2
Architecture: any
Version: 2.1.3-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Homepage: https://www.ccb.jhu.edu/software/kraken2/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/kraken2
Vcs-Git: https://salsa.debian.org/med-team/kraken2.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), zlib1g-dev
Package-List:
 kraken2 deb science optional arch=any
Checksums-Sha1:
 a9cbabfde878a430afaa0cf5a51208ec50b89e32 218851 kraken2_2.1.3.orig.tar.gz
 dc6fa5becaea153b63c28b88be9aa6863c3e692f 339032 kraken2_2.1.3-1.debian.tar.xz
Checksums-Sha256:
 5269fa14adfb02e38c2da2e605e909a432d76c680d73e2e0e80e27ccd04d7c69 218851 kraken2_2.1.3.orig.tar.gz
 41f69194a839041aa03e49541173db09bf8a48bf85254196fd58b2b556bd9b65 339032 kraken2_2.1.3-1.debian.tar.xz
Files:
 25c1fa9393013929ed395647ed5d1e03 218851 kraken2_2.1.3.orig.tar.gz
 5b37eaf3f373c1086ddf1db83ec3d14d 339032 kraken2_2.1.3-1.debian.tar.xz

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gpgv: Signature made Tue Nov 28 19:25:57 2023 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./kraken2_2.1.3-1.dsc: no acceptable signature found
dpkg-source: info: extracting kraken2 in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking kraken2_2.1.3.orig.tar.gz
dpkg-source: info: unpacking kraken2_2.1.3-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_install.patch
dpkg-source: info: applying hardening+debug_options.patch
dpkg-source: info: applying fix_reading_fasta.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
CONFIG_SITE=/etc/dpkg-cross/cross-config.armhf
DEB_BUILD_OPTIONS=nocheck
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=C.UTF-8
LOGNAME=crossqa
OLDPWD=/home/crossqa
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SBUILD_CONFIG=/tmp/tmp.7xSYmpASC1/sbuild.conf
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=crossqa
SCHROOT_SESSION_ID=sid-amd64-sbuild-a9321cef-c653-4104-a596-4e0915d1e204
SCHROOT_UID=1000
SCHROOT_USER=crossqa
SHELL=/bin/sh
USER=crossqa
XDG_SESSION_CLASS=user

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -aarmhf -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1
dpkg-buildpackage: info: source package kraken2
dpkg-buildpackage: info: source version 2.1.3-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-architecture: warning: specified GNU system type arm-linux-gnueabihf does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean  --sourcedirectory=src
   dh_auto_clean -O--sourcedirectory=src
	cd src && make -j1 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
rm -f *.o estimate_capacity build_db classify dump_table lookup_accession_numbers k2mask
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
   dh_autoreconf_clean -O--sourcedirectory=src
   dh_clean -O--sourcedirectory=src
 debian/rules binary-arch
dh binary-arch  --sourcedirectory=src
   dh_update_autotools_config -a -O--sourcedirectory=src
   dh_autoreconf -a -O--sourcedirectory=src
   dh_auto_configure -a -O--sourcedirectory=src
   dh_auto_build -a -O--sourcedirectory=src
	cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=arm-linux-gnueabihf-pkg-config CXX=arm-linux-gnueabihf-g\+\+ CC=arm-linux-gnueabihf-gcc
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o estimate_capacity.o estimate_capacity.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o seqreader.o seqreader.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o mmscanner.o mmscanner.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72,
                 from /usr/arm-linux-gnueabihf/include/c++/13/queue:63,
                 from kraken2_headers.h:15,
                 from mmscanner.h:10,
                 from mmscanner.cc:7:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const kraken2::MinimizerData&}; _Tp = kraken2::MinimizerData; _Alloc = std::allocator<kraken2::MinimizerData>]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<kraken2::MinimizerData>::iterator’ changed in GCC 7.1
  445 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = kraken2::MinimizerData; _Alloc = std::allocator<kraken2::MinimizerData>]’,
    inlined from ‘uint64_t* kraken2::MinimizerScanner::NextMinimizer()’ at mmscanner.cc:167:21:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<kraken2::MinimizerData*, std::vector<kraken2::MinimizerData> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o omp_hack.o omp_hack.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o utilities.o utilities.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o estimate_capacity estimate_capacity.o seqreader.o mmscanner.o omp_hack.o utilities.o -Wl,-z,relro -Wl,-z,now
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o build_db.o build_db.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:61,
                 from /usr/arm-linux-gnueabihf/include/c++/13/algorithm:61,
                 from kraken2_headers.h:1,
                 from build_db.cc:7:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1812 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1918 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1932 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72,
                 from /usr/arm-linux-gnueabihf/include/c++/13/queue:63,
                 from kraken2_headers.h:15:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
  445 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
    inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4861:18,
    inlined from ‘_Z15ProcessSequenceRK7OptionsRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyRN7kraken216CompactHashTableERKNSA_8TaxonomyE._omp_fn.1’ at build_db.cc:361:11:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’,
    inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:31,
    inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4861:18,
    inlined from ‘_Z15ProcessSequenceRK7OptionsRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyRN7kraken216CompactHashTableERKNSA_8TaxonomyE._omp_fn.1’ at build_db.cc:361:11:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1859 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1864 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
    inlined from ‘_Z15ProcessSequenceRK7OptionsRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEyRN7kraken216CompactHashTableERKNSA_8TaxonomyE._omp_fn.1’ at build_db.cc:360:37:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o mmap_file.o mmap_file.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o compact_hash.o compact_hash.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o taxonomy.o taxonomy.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/map:62,
                 from kraken2_headers.h:14,
                 from mmap_file.h:10,
                 from taxonomy.h:10,
                 from taxonomy.cc:7:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
In file included from /usr/arm-linux-gnueabihf/include/c++/13/map:63:
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::MarkNode(uint64_t)’ at taxonomy.cc:119:30:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘kraken2::NCBITaxonomy::NCBITaxonomy(std::string, std::string)’ at taxonomy.cc:69:24:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’,
    inlined from ‘kraken2::NCBITaxonomy::NCBITaxonomy(std::string, std::string)’ at taxonomy.cc:70:25:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::__cxx11::basic_string<char>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’,
    inlined from ‘kraken2::NCBITaxonomy::NCBITaxonomy(std::string, std::string)’ at taxonomy.cc:71:22:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::__cxx11::basic_string<char>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’,
    inlined from ‘kraken2::NCBITaxonomy::NCBITaxonomy(std::string, std::string)’ at taxonomy.cc:105:30:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:144:20:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = long long unsigned int; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:138:22:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:145:20:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  532 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  533 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:155:37:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:158:67:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = long long unsigned int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:158:69:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::__cxx11::basic_string<char>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:160:64:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Tp = long long unsigned int; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:160:66:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:163:59:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::__cxx11::basic_string<char>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’,
    inlined from ‘void kraken2::NCBITaxonomy::ConvertToKrakenTaxonomy(const char*)’ at taxonomy.cc:172:45:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
  513 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o build_db build_db.o mmap_file.o compact_hash.o taxonomy.o seqreader.o mmscanner.o omp_hack.o utilities.o -Wl,-z,relro -Wl,-z,now
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o classify.o classify.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:61,
                 from /usr/arm-linux-gnueabihf/include/c++/13/algorithm:61,
                 from kraken2_headers.h:1,
                 from classify.cc:7:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<OutputData*, vector<OutputData> >; _Distance = int; _Tp = OutputData; _Compare = __gnu_cxx::__ops::_Iter_comp_val<ProcessFiles(const char*, const char*, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, OutputStreamData&, kraken2::taxon_counters_t&)::<lambda(const OutputData&, const OutputData&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:135:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<OutputData*, std::vector<OutputData> >’ changed in GCC 7.1
  135 |     __push_heap(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<OutputData*, vector<OutputData> >; _Distance = int; _Tp = OutputData; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ProcessFiles(const char*, const char*, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, OutputStreamData&, kraken2::taxon_counters_t&)::<lambda(const OutputData&, const OutputData&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<OutputData*, std::vector<OutputData> >’ changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:72,
                 from /usr/arm-linux-gnueabihf/include/c++/13/queue:63,
                 from kraken2_headers.h:15:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
  445 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const OutputData&}; _Tp = OutputData; _Alloc = std::allocator<OutputData>]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<OutputData>::iterator’ changed in GCC 7.1
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
    inlined from ‘kraken2::taxid_t ClassifySequence(kraken2::Sequence&, kraken2::Sequence&, std::ostringstream&, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, kraken2::MinimizerScanner&, std::vector<long long unsigned int>&, kraken2::taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&, kraken2::taxon_counters_t&)’ at classify.cc:564:23:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
    inlined from ‘kraken2::taxid_t ClassifySequence(kraken2::Sequence&, kraken2::Sequence&, std::ostringstream&, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, kraken2::MinimizerScanner&, std::vector<long long unsigned int>&, kraken2::taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&, kraken2::taxon_counters_t&)’ at classify.cc:567:23:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’,
    inlined from ‘kraken2::taxid_t ClassifySequence(kraken2::Sequence&, kraken2::Sequence&, std::ostringstream&, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, kraken2::MinimizerScanner&, std::vector<long long unsigned int>&, kraken2::taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&, kraken2::taxon_counters_t&)’ at classify.cc:570:21:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OutputData; _Alloc = std::allocator<OutputData>]’,
    inlined from ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = OutputData; _Sequence = std::vector<OutputData>; _Compare = ProcessFiles(const char*, const char*, kraken2::KeyValueStore*, kraken2::Taxonomy&, kraken2::IndexOptions&, Options&, ClassificationStats&, OutputStreamData&, kraken2::taxon_counters_t&)::<lambda(const OutputData&, const OutputData&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_queue.h:740:13,
    inlined from ‘_Z12ProcessFilesPKcS0_PN7kraken213KeyValueStoreERNS1_8TaxonomyERNS1_12IndexOptionsER7OptionsR19ClassificationStatsR16OutputStreamDataRSt13unordered_mapIyNS1_10ReadCountsI20HyperLogLogPlusMinusIyEEESt4hashIyESt8equal_toIyESaISt4pairIKySI_EEE._omp_fn.0’ at classify.cc:373:26:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<OutputData*, std::vector<OutputData> >’ changed in GCC 7.1
 1289 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o reports.o reports.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/algorithm:61,
                 from kraken2_headers.h:1,
                 from reports.h:12,
                 from reports.cc:7:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1812 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:61:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1918 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1932 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)’ at reports.cc:92:9:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)> >]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:31,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::MpaReportDFS(taxid_t, std::ofstream&, bool, Taxonomy&, taxon_counts_t&, std::vector<std::__cxx11::basic_string<char> >&)’ at reports.cc:92:9:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1859 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1864 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1812 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1918 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1932 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h: In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1854 |     __final_insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1854:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1859 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1864 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:181:14:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1950 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:181:14,
    inlined from ‘void kraken2::ReportKrakenStyle(std::string, bool, bool, Taxonomy&, taxon_counters_t&, uint64_t, uint64_t)’ at reports.cc:209:18:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1950 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:181:14,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:187:22,
    inlined from ‘void kraken2::ReportKrakenStyle(std::string, bool, bool, Taxonomy&, taxon_counters_t&, uint64_t, uint64_t)’ at reports.cc:209:18:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1950 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)> >]’,
    inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)::<lambda(const uint64_t&, const uint64_t&)>]’ at /usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:4894:18,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:181:14,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:187:22,
    inlined from ‘void kraken2::KrakenReportDFS(uint32_t, std::ofstream&, bool, bool, Taxonomy&, taxon_counters_t&, taxon_counters_t&, uint64_t, char, int, int)’ at reports.cc:187:22,
    inlined from ‘void kraken2::ReportKrakenStyle(std::string, bool, bool, Taxonomy&, taxon_counters_t&, uint64_t, uint64_t)’ at reports.cc:209:18:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1947 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1948 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1949 |                                 __comp);
      |                                 ~~~~~~~
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_algo.h:1950:38: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
 1950 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o hyperloglogplus.o hyperloglogplus.cc
In file included from /usr/arm-linux-gnueabihf/include/c++/13/vector:66,
                 from /usr/arm-linux-gnueabihf/include/c++/13/queue:63,
                 from kraken2_headers.h:15,
                 from hyperloglogplus.h:16,
                 from hyperloglogplus.cc:8:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h: In function ‘std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
/usr/arm-linux-gnueabihf/include/c++/13/bits/stl_vector.h:675:7: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
  675 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from hyperloglogplus.cc:20:
hyperloglogplus-bias.h: In function ‘void __static_initialization_and_destruction_0()’:
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:64:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   64 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
hyperloglogplus-bias.h:97:1: note: parameter passing for argument of type ‘std::initializer_list<double>’ changed in GCC 7.1
   97 | };
      | ^
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o aa_translate.o aa_translate.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o classify classify.o reports.o hyperloglogplus.o mmap_file.o compact_hash.o taxonomy.o seqreader.o mmscanner.o omp_hack.o aa_translate.o utilities.o -Wl,-z,relro -Wl,-z,now
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o dump_table.o dump_table.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o dump_table dump_table.o mmap_file.o compact_hash.o omp_hack.o taxonomy.o reports.o hyperloglogplus.o -Wl,-z,relro -Wl,-z,now
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o lookup_accession_numbers.o lookup_accession_numbers.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o lookup_accession_numbers lookup_accession_numbers.o mmap_file.o omp_hack.o utilities.o -Wl,-z,relro -Wl,-z,now
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2  -c -o k2mask.o k2mask.cc
arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o k2mask k2mask.o seqreader.o -lz -pthread
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=src" was omitted due to "DEB_BUILD_OPTIONS=nocheck"
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--sourcedirectory=src
   dh_prep -a -O--sourcedirectory=src
   dh_installdirs -a -O--sourcedirectory=src
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -- KRAKEN2_DIR=/<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2
	cd src && make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/kraken2 AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" KRAKEN2_DIR=/<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
cp estimate_capacity build_db classify dump_table lookup_accession_numbers k2mask "/<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/"
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
./install_kraken2.sh /<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
cp estimate_capacity build_db classify dump_table lookup_accession_numbers k2mask "/<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/"
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'

Kraken 2 installation complete.

To make things easier for you, you may want to copy/symlink the following
files into a directory in your PATH:
  /<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/kraken2
  /<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/kraken2-build
  /<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/kraken2-inspect
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
    sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--sourcedirectory=src
   dh_installchangelogs -a -O--sourcedirectory=src
   dh_installman -a -O--sourcedirectory=src
   dh_installsystemduser -a -O--sourcedirectory=src
   dh_perl -a -O--sourcedirectory=src
   debian/rules override_dh_link
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_link
for file in /<<PKGBUILDDIR>>/debian/kraken2/usr/lib/kraken2/kraken* ; do \
    if ! echo ${file} | grep -q '\.pm$' ; then \
	ln -s ../lib/kraken2/`basename ${file}` /<<PKGBUILDDIR>>/debian/kraken2/usr/bin/`basename ${file}` ; \
    fi \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_strip_nondeterminism -a -O--sourcedirectory=src
   dh_compress -a -O--sourcedirectory=src
   dh_fixperms -a -O--sourcedirectory=src
   dh_missing -a -O--sourcedirectory=src
   dh_dwz -a -O--sourcedirectory=src
   dh_strip -a -O--sourcedirectory=src
   dh_makeshlibs -a -O--sourcedirectory=src
   dh_shlibdeps -a -O--sourcedirectory=src
dpkg-shlibdeps: warning: debian/kraken2/usr/lib/kraken2/dump_table contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kraken2/usr/lib/kraken2/classify contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/kraken2/usr/lib/kraken2/k2mask contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
   dh_installdeb -a -O--sourcedirectory=src
   dh_gencontrol -a -O--sourcedirectory=src
dpkg-gencontrol: warning: package kraken2: substitution variable ${perl:Depends} unused, but is defined
dpkg-gencontrol: warning: package kraken2: substitution variable ${perl:Depends} unused, but is defined
   dh_md5sums -a -O--sourcedirectory=src
   dh_builddeb -a -O--sourcedirectory=src
dpkg-deb: building package 'kraken2' in '../kraken2_2.1.3-1_armhf.deb'.
dpkg-deb: building package 'kraken2-dbgsym' in '../kraken2-dbgsym_2.1.3-1_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../kraken2_2.1.3-1_armhf.buildinfo
 dpkg-genchanges --build=any -O../kraken2_2.1.3-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-04-13T18:31:04Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


kraken2_2.1.3-1_armhf.changes:
------------------------------

Format: 1.8
Date: Tue, 28 Nov 2023 20:23:52 +0100
Source: kraken2
Binary: kraken2 kraken2-dbgsym
Built-For-Profiles: cross nocheck
Architecture: armhf
Version: 2.1.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 kraken2    - taxonomic classification system using exact k-mer matches
Changes:
 kraken2 (2.1.3-1) unstable; urgency=medium
 .
   * New upstream version
   * Standards-Version: 4.6.2 (routine-update)
   * Build-Depends: zlib1g-dev
   * Depends: python3
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Files:
 cec2e55370dee8f5c185a53b261904df 2291964 debug optional kraken2-dbgsym_2.1.3-1_armhf.deb
 a1fb01829a97b1f10f5622a93b626840 5132 science optional kraken2_2.1.3-1_armhf.buildinfo
 7a6c98057c2043694f926495b4507e37 845048 science optional kraken2_2.1.3-1_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: kraken2
Binary: kraken2 kraken2-dbgsym
Architecture: armhf
Version: 2.1.3-1
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 7863d5b17b3ffcbcb01d7e2f1ed659bc3c83a5ec7225fe1ab56b53f129979e58 845048 kraken2_2.1.3-1_armhf.deb
Build-Origin: Debian
Build-Architecture: amd64
Build-Date: Sat, 13 Apr 2024 18:31:04 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
 merged-usr-via-aliased-dirs
Installed-Build-Depends:
 autoconf (= 2.71-3),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-14),
 autotools-dev (= 20220109.1),
 base-files (= 13),
 base-passwd (= 3.6.3),
 bash (= 5.2.21-2),
 binutils (= 2.42-4),
 binutils-common (= 2.42-4),
 binutils-x86-64-linux-gnu (= 2.42-4),
 bsdextrautils (= 2.40-5),
 bsdutils (= 1:2.40-5),
 build-essential (= 12.10),
 bzip2 (= 1.0.8-5.1),
 coreutils (= 9.4-3.1),
 cpp (= 4:13.2.0-7),
 cpp-13 (= 13.2.0-23),
 cpp-13-x86-64-linux-gnu (= 13.2.0-23),
 cpp-x86-64-linux-gnu (= 4:13.2.0-7),
 dash (= 0.5.12-6),
 debconf (= 1.5.86),
 debhelper (= 13.15.3),
 debianutils (= 5.17),
 dh-autoreconf (= 20),
 dh-strip-nondeterminism (= 1.13.1-1),
 diffutils (= 1:3.10-1),
 dpkg (= 1.22.6),
 dpkg-dev (= 1.22.6),
 dwz (= 0.15-1+b1),
 file (= 1:5.45-3),
 findutils (= 4.9.0-5),
 g++ (= 4:13.2.0-7),
 g++-13 (= 13.2.0-23),
 g++-13-x86-64-linux-gnu (= 13.2.0-23),
 g++-x86-64-linux-gnu (= 4:13.2.0-7),
 gcc (= 4:13.2.0-7),
 gcc-13 (= 13.2.0-23),
 gcc-13-base (= 13.2.0-23),
 gcc-13-x86-64-linux-gnu (= 13.2.0-23),
 gcc-14-base (= 14-20240330-1),
 gcc-x86-64-linux-gnu (= 4:13.2.0-7),
 gettext (= 0.21-14+b1),
 gettext-base (= 0.21-14+b1),
 grep (= 3.11-4),
 groff-base (= 1.23.0-3+b1),
 gzip (= 1.12-1.1),
 hostname (= 3.23+nmu2),
 init-system-helpers (= 1.66),
 intltool-debian (= 0.35.0+20060710.6),
 libacl1 (= 2.3.2-1),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 14-20240330-1),
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 libattr1 (= 1:2.5.2-1),
 libaudit-common (= 1:3.1.2-2.1),
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 libbinutils (= 2.42-4),
 libblkid1 (= 2.40-5),
 libbz2-1.0 (= 1.0.8-5.1),
 libc-bin (= 2.37-17),
 libc-dev-bin (= 2.37-17),
 libc6 (= 2.37-17),
 libc6-dev (= 2.37-17),
 libcap-ng0 (= 0.8.4-2),
 libcap2 (= 1:2.66-5),
 libcc1-0 (= 14-20240330-1),
 libcrypt-dev (= 1:4.4.36-4),
 libcrypt1 (= 1:4.4.36-4),
 libctf-nobfd0 (= 2.42-4),
 libctf0 (= 2.42-4),
 libdb5.3t64 (= 5.3.28+dfsg2-6),
 libdebconfclient0 (= 0.271+b3),
 libdebhelper-perl (= 13.15.3),
 libdpkg-perl (= 1.22.6),
 libelf1t64 (= 0.191-1+b1),
 libfile-stripnondeterminism-perl (= 1.13.1-1),
 libgcc-13-dev (= 13.2.0-23),
 libgcc-s1 (= 14-20240330-1),
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 libgdbm6t64 (= 1.23-5.1+b1),
 libgmp10 (= 2:6.3.0+dfsg-2+b1),
 libgomp1 (= 14-20240330-1),
 libgpg-error0 (= 1.47-3),
 libgprofng0 (= 2.42-4),
 libhwasan0 (= 14-20240330-1),
 libicu72 (= 72.1-4+b1),
 libisl23 (= 0.26-3+b2),
 libitm1 (= 14-20240330-1),
 libjansson4 (= 2.14-2+b2),
 liblsan0 (= 14-20240330-1),
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 liblzma5 (= 5.6.1+really5.4.5-1),
 libmagic-mgc (= 1:5.45-3),
 libmagic1t64 (= 1:5.45-3),
 libmd0 (= 1.1.0-2),
 libmount1 (= 2.40-5),
 libmpc3 (= 1.3.1-1+b2),
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 libpcre2-8-0 (= 10.42-4+b1),
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 login (= 1:4.13+dfsg1-4),
 m4 (= 1.4.19-4),
 make (= 4.3-4.1),
 man-db (= 2.12.1-1),
 mawk (= 1.3.4.20240123-1),
 ncurses-base (= 6.4+20240113-1),
 ncurses-bin (= 6.4+20240113-1),
 patch (= 2.7.6-7),
 perl (= 5.38.2-3.2+b2),
 perl-base (= 5.38.2-3.2+b2),
 perl-modules-5.38 (= 5.38.2-3.2),
 po-debconf (= 1.0.21+nmu1),
 rpcsvc-proto (= 1.4.3-1),
 sed (= 4.9-2),
 sensible-utils (= 0.0.22),
 sysvinit-utils (= 3.08-7),
 tar (= 1.35+dfsg-3),
 usr-is-merged (= 39),
 util-linux (= 2.40-5),
 xz-utils (= 5.6.1+really5.4.5-1),
 zlib1g (= 1:1.3.dfsg-3.1),
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Environment:
 DEB_BUILD_OPTIONS="nocheck parallel=1"
 DEB_BUILD_PROFILES="cross nocheck"
 LANG="en_US.UTF-8"
 LC_ALL="C.UTF-8"
 LC_COLLATE="C.UTF-8"
 SOURCE_DATE_EPOCH="1701199432"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


kraken2-dbgsym_2.1.3-1_armhf.deb
--------------------------------

 new Debian package, version 2.0.
 size 2291964 bytes: control archive=852 bytes.
     576 bytes,    12 lines      control
     723 bytes,     7 lines      md5sums
 Package: kraken2-dbgsym
 Source: kraken2
 Version: 2.1.3-1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 2399
 Depends: kraken2 (= 2.1.3-1)
 Section: debug
 Priority: optional
 Description: debug symbols for kraken2
 Build-Ids: 596d0782f9c23d35297f8b12dadb07d2cf954b4c 7bdc96762eca37044ea3c503792e5b1dc4024332 a468c3ff07803adb473f789f5c905df185537b62 b97a76b3a6976a696755757713e00c875af1b8c8 f220263761fec58136515674ade266c8b79bdceb f59bf8b22e433b1cbf51a77305407a84a0f81bb0

drwxr-xr-x root/root         0 2023-11-28 19:23 ./
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/59/
-rw-r--r-- root/root    715524 2023-11-28 19:23 ./usr/lib/debug/.build-id/59/6d0782f9c23d35297f8b12dadb07d2cf954b4c.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/7b/
-rw-r--r-- root/root    104512 2023-11-28 19:23 ./usr/lib/debug/.build-id/7b/dc96762eca37044ea3c503792e5b1dc4024332.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/a4/
-rw-r--r-- root/root    426500 2023-11-28 19:23 ./usr/lib/debug/.build-id/a4/68c3ff07803adb473f789f5c905df185537b62.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/b9/
-rw-r--r-- root/root    107236 2023-11-28 19:23 ./usr/lib/debug/.build-id/b9/7a76b3a6976a696755757713e00c875af1b8c8.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/f2/
-rw-r--r-- root/root    347324 2023-11-28 19:23 ./usr/lib/debug/.build-id/f2/20263761fec58136515674ade266c8b79bdceb.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.build-id/f5/
-rw-r--r-- root/root    455188 2023-11-28 19:23 ./usr/lib/debug/.build-id/f5/9bf8b22e433b1cbf51a77305407a84a0f81bb0.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root    278796 2023-11-28 19:23 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/kraken2.debug
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/
lrwxrwxrwx root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2-dbgsym -> kraken2


kraken2_2.1.3-1_armhf.deb
-------------------------

 new Debian package, version 2.0.
 size 845048 bytes: control archive=3096 bytes.
    2396 bytes,    41 lines      control
    4184 bytes,    56 lines      md5sums
 Package: kraken2
 Version: 2.1.3-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1741
 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgomp1 (>= 6), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6), python3, ncbi-blast+
 Section: science
 Priority: optional
 Homepage: https://www.ccb.jhu.edu/software/kraken2/
 Description: taxonomic classification system using exact k-mer matches
  Kraken 2 is the newest version of Kraken, a taxonomic classification
  system using exact k-mer matches to achieve high accuracy and fast
  classification speeds. This classifier matches each k-mer within a query
  sequence to the lowest common ancestor (LCA) of all genomes containing
  the given k-mer. The k-mer assignments inform the classification
  algorithm. [see: Kraken 1's Webpage for more details].
  .
  Kraken 2 provides significant improvements to Kraken 1, with faster
  database build times, smaller database sizes, and faster classification
  speeds. These improvements were achieved by the following updates to the
  Kraken classification program:
  .
   1. Storage of Minimizers: Instead of storing/querying entire k-mers,
      Kraken 2 stores minimizers (l-mers) of each k-mer. The length of
      each l-mer must be ≤ the k-mer length. Each k-mer is treated by
      Kraken 2 as if its LCA is the same as its minimizer's LCA.
   2. Introduction of Spaced Seeds: Kraken 2 also uses spaced seeds to
      store and query minimizers to improve classification accuracy.
   3. Database Structure: While Kraken 1 saved an indexed and sorted list
      of k-mer/LCA pairs, Kraken 2 uses a compact hash table. This hash
      table is a probabilistic data structure that allows for faster
      queries and lower memory requirements. However, this data structure
      does have a <1% chance of returning the incorrect LCA or returning
      an LCA for a non-inserted minimizer. Users can compensate for this
      possibility by using Kraken's confidence scoring thresholds.
   4. Protein Databases: Kraken 2 allows for databases built from amino
      acid sequences. When queried, Kraken 2 performs a six-frame
      translated search of the query sequences against the database.
   5. 16S Databases: Kraken 2 also provides support for databases not
      based on NCBI's taxonomy. Currently, these include the 16S
      databases: Greengenes, SILVA, and RDP.

drwxr-xr-x root/root         0 2023-11-28 19:23 ./
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/bin/
lrwxrwxrwx root/root         0 2023-11-28 19:23 ./usr/bin/kraken2 -> ../lib/kraken2/kraken2
lrwxrwxrwx root/root         0 2023-11-28 19:23 ./usr/bin/kraken2-build -> ../lib/kraken2/kraken2-build
lrwxrwxrwx root/root         0 2023-11-28 19:23 ./usr/bin/kraken2-inspect -> ../lib/kraken2/kraken2-inspect
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/lib/kraken2/
-rwxr-xr-x root/root       959 2023-11-28 19:23 ./usr/lib/kraken2/16S_gg_installation.sh
-rwxr-xr-x root/root       956 2023-11-28 19:23 ./usr/lib/kraken2/16S_rdp_installation.sh
-rwxr-xr-x root/root      1193 2023-11-28 19:23 ./usr/lib/kraken2/16S_silva_installation.sh
-rwxr-xr-x root/root       947 2023-11-28 19:23 ./usr/lib/kraken2/add_to_library.sh
-rwxr-xr-x root/root     71316 2023-11-28 19:23 ./usr/lib/kraken2/build_db
-rwxr-xr-x root/root      2434 2023-11-28 19:23 ./usr/lib/kraken2/build_gg_taxonomy.pl
-rwxr-xr-x root/root      4654 2023-11-28 19:23 ./usr/lib/kraken2/build_kraken2_db.sh
-rwxr-xr-x root/root      2187 2023-11-28 19:23 ./usr/lib/kraken2/build_rdp_taxonomy.pl
-rwxr-xr-x root/root      1265 2023-11-28 19:23 ./usr/lib/kraken2/build_silva_taxonomy.pl
-rwxr-xr-x root/root    161428 2023-11-28 19:23 ./usr/lib/kraken2/classify
-rwxr-xr-x root/root       583 2023-11-28 19:23 ./usr/lib/kraken2/clean_db.sh
-rwxr-xr-x root/root      1273 2023-11-28 19:23 ./usr/lib/kraken2/cp_into_tempfile.pl
-rwxr-xr-x root/root      4497 2023-11-28 19:23 ./usr/lib/kraken2/download_genomic_library.sh
-rwxr-xr-x root/root      1760 2023-11-28 19:23 ./usr/lib/kraken2/download_taxonomy.sh
-rwxr-xr-x root/root    128660 2023-11-28 19:23 ./usr/lib/kraken2/dump_table
-rwxr-xr-x root/root     22108 2023-11-28 19:23 ./usr/lib/kraken2/estimate_capacity
-rwxr-xr-x root/root     77187 2023-11-28 19:23 ./usr/lib/kraken2/k2
-rwxr-xr-x root/root     47820 2023-11-28 19:23 ./usr/lib/kraken2/k2mask
-rwxr-xr-x root/root      8136 2023-11-28 19:23 ./usr/lib/kraken2/kraken2
-rwxr-xr-x root/root     10930 2023-11-28 19:23 ./usr/lib/kraken2/kraken2-build
-rwxr-xr-x root/root      2698 2023-11-28 19:23 ./usr/lib/kraken2/kraken2-inspect
-rw-r--r-- root/root      2803 2023-11-28 19:23 ./usr/lib/kraken2/kraken2lib.pm
-rwxr-xr-x root/root     22108 2023-11-28 19:23 ./usr/lib/kraken2/lookup_accession_numbers
-rwxr-xr-x root/root      1776 2023-11-28 19:23 ./usr/lib/kraken2/lookup_accession_numbers.pl
-rwxr-xr-x root/root      3879 2023-11-28 19:23 ./usr/lib/kraken2/make_seqid2taxid_map.pl
-rwxr-xr-x root/root      1209 2023-11-28 19:23 ./usr/lib/kraken2/mask_low_complexity.sh
-rwxr-xr-x root/root      6406 2023-11-28 19:23 ./usr/lib/kraken2/rsync_from_ncbi.pl
-rwxr-xr-x root/root      1655 2023-11-28 19:23 ./usr/lib/kraken2/scan_fasta_file.pl
-rwxr-xr-x root/root      1596 2023-11-28 19:23 ./usr/lib/kraken2/standard_installation.sh
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc-base/
-rw-r--r-- root/root      2282 2023-11-28 19:23 ./usr/share/doc-base/kraken2.kraken2
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/
-rw-r--r-- root/root       261 2023-11-28 19:23 ./usr/share/doc/kraken2/README.test
-rw-r--r-- root/root       627 2023-11-28 19:23 ./usr/share/doc/kraken2/changelog.Debian.gz
-rw-r--r-- root/root      2699 2023-06-07 00:25 ./usr/share/doc/kraken2/changelog.gz
-rw-r--r-- root/root      1012 2023-11-28 19:23 ./usr/share/doc/kraken2/copyright
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/html/
-rw-r--r-- root/root     48468 2023-06-07 00:25 ./usr/share/doc/kraken2/html/MANUAL.html
-rw-r--r-- root/root       188 2023-11-28 19:23 ./usr/share/doc/kraken2/html/bar-bg.png
-rw-r--r-- root/root       111 2023-06-07 00:25 ./usr/share/doc/kraken2/html/head.html
lrwxrwxrwx root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/html/index.html -> MANUAL.html
-rw-r--r-- root/root       727 2023-06-07 00:25 ./usr/share/doc/kraken2/html/kraken.css
-rw-r--r-- root/root       194 2023-06-07 00:25 ./usr/share/doc/kraken2/html/top.html
-rw-r--r-- root/root       710 2023-11-28 19:23 ./usr/share/doc/kraken2/run-unit-test
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/
-rw-r--r-- root/root      1776 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/Acartia_tonsa.fasta
-rw-r--r-- root/root      1578 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/Acinetobacter_phage.fasta.gz
-rw-r--r-- root/root       237 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test.fa
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/
-rw-r--r-- root/root      1834 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/citation.dmp
-rw-r--r-- root/root    807186 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/delnodes.dmp.gz
-rw-r--r-- root/root       442 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/division.dmp
-rw-r--r-- root/root      2335 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/gc.prt.gz
-rw-r--r-- root/root       779 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/gencode.dmp.gz
-rw-r--r-- root/root        34 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/gi_taxid_nucl.dmp
-rw-r--r-- root/root    261119 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/merged.dmp.gz
-rw-r--r-- root/root       870 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/names.dmp
-rw-r--r-- root/root       834 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/nodes.dmp
-rw-r--r-- root/root      2652 2023-11-28 19:23 ./usr/share/doc/kraken2/test_data/test_db/taxonomy/readme.txt
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/man/
drwxr-xr-x root/root         0 2023-11-28 19:23 ./usr/share/man/man1/
-rw-r--r-- root/root      1131 2023-11-28 19:23 ./usr/share/man/man1/kraken2-build.1.gz
-rw-r--r-- root/root       535 2023-11-28 19:23 ./usr/share/man/man1/kraken2-inspect.1.gz
-rw-r--r-- root/root       945 2023-11-28 19:23 ./usr/share/man/man1/kraken2.1.gz


lintian
-------


Setup apt archive
-----------------

Merged Build-Depends: lintian:amd64
Filtered Build-Depends: lintian:amd64
dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-lintian-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [615 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [1308 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [1387 B]
Fetched 3310 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install lintian build dependencies (apt-based resolver)
-------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
Execute external solver...
The following packages were automatically installed and are no longer required:
  mount tzdata
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl
  libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl
  libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl
  libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl
  libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl
  libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl
  libemail-address-xs-perl libencode-locale-perl libexception-class-perl
  libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl
  libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl
  libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl
  libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libimport-into-perl
  libio-html-perl libio-interactive-perl libio-socket-ssl-perl
  libipc-run3-perl libipc-system-simple-perl libiterator-perl
  libiterator-util-perl libjson-maybexs-perl liblist-compare-perl
  liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl
  libmodule-implementation-perl libmodule-runtime-perl libmoo-perl
  libmoox-aliases-perl libmouse-perl libnamespace-clean-perl
  libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl
  libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl
  libnumber-compare-perl libpackage-stash-perl libparams-classify-perl
  libparams-util-perl libpath-tiny-perl libperlio-gzip-perl
  libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64
  libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl
  libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl
  libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
  libsub-install-perl libsub-name-perl libsub-quote-perl
  libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl
  libtext-levenshteinxs-perl libtext-markdown-discount-perl
  libtext-xslate-perl libtime-duration-perl libtime-moment-perl
  libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl
  libvariable-magic-perl libwww-mechanize-perl libwww-perl
  libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2
  libyaml-libyaml-perl lintian lzop netbase openssl patchutils
  perl-openssl-defaults plzip readline-common t1utils unzip
Suggested packages:
  isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl
  libscalar-number-perl libbareword-filehandles-perl libindirect-perl
  libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl
  libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc
  zip
Recommended packages:
  gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl
  liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl
  libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl
  libhttp-daemon-perl libmailtools-perl
The following NEW packages will be installed:
  ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl
  libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl
  libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl
  libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl
  libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl
  libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl
  libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl
  libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl
  libemail-address-xs-perl libencode-locale-perl libexception-class-perl
  libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl
  libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl
  libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl
  libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libimport-into-perl
  libio-html-perl libio-interactive-perl libio-socket-ssl-perl
  libipc-run3-perl libipc-system-simple-perl libiterator-perl
  libiterator-util-perl libjson-maybexs-perl liblist-compare-perl
  liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl
  liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl
  libmodule-implementation-perl libmodule-runtime-perl libmoo-perl
  libmoox-aliases-perl libmouse-perl libnamespace-clean-perl
  libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl
  libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl
  libnumber-compare-perl libpackage-stash-perl libparams-classify-perl
  libparams-util-perl libpath-tiny-perl libperlio-gzip-perl
  libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64
  libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl
  libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl
  libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
  libsub-install-perl libsub-name-perl libsub-quote-perl
  libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl
  libtext-levenshteinxs-perl libtext-markdown-discount-perl
  libtext-xslate-perl libtime-duration-perl libtime-moment-perl
  libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl
  libvariable-magic-perl libwww-mechanize-perl libwww-perl
  libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2
  libyaml-libyaml-perl lintian lzop netbase openssl patchutils
  perl-openssl-defaults plzip readline-common
  sbuild-build-depends-lintian-dummy:armhf t1utils unzip
0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded.
Need to get 13.7 MB of archives.
After this operation, 51.7 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B]
Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB]
Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-4 [69.3 kB]
Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.2.1-3 [1360 kB]
Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20240203 [158 kB]
Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.66-1 [34.0 kB]
Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB]
Get:8 http://localhost:3142/debian sid/main amd64 libreadline8t64 amd64 8.2-4 [167 kB]
Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-3 [565 kB]
Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.45.2-1 [895 kB]
Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-3 [950 kB]
Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.16.0-1 [2936 kB]
Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB]
Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b5 [66.9 kB]
Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b1 [10.6 kB]
Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2+b2 [15.1 kB]
Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b3 [22.4 kB]
Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.64-1 [44.7 kB]
Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB]
Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b3 [121 kB]
Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB]
Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.28-1 [98.6 kB]
Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.82-1 [98.9 kB]
Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.64-1 [217 kB]
Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B]
Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b3 [36.2 kB]
Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1+b2 [13.7 kB]
Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB]
Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-3 [24.0 kB]
Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB]
Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB]
Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB]
Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B]
Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1+b2 [128 kB]
Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB]
Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB]
Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB]
Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB]
Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.59-1 [43.6 kB]
Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b3 [32.5 kB]
Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB]
Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB]
Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB]
Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB]
Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b3 [98.1 kB]
Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB]
Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB]
Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b3 [24.3 kB]
Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b3 [29.3 kB]
Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB]
Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB]
Get:60 http://localhost:3142/debian sid/main amd64 libnumber-compare-perl all 0.03-3 [6332 B]
Get:61 http://localhost:3142/debian sid/main amd64 libtext-glob-perl all 0.11-3 [7676 B]
Get:62 http://localhost:3142/debian sid/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB]
Get:63 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get:64 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get:65 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get:66 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB]
Get:67 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB]
Get:68 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get:69 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.45-1 [82.0 kB]
Get:70 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB]
Get:71 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB]
Get:72 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB]
Get:73 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get:74 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get:75 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B]
Get:76 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.94-1+b1 [339 kB]
Get:77 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.085-1 [218 kB]
Get:78 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB]
Get:79 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get:80 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:81 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.77-1 [183 kB]
Get:82 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB]
Get:83 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get:84 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB]
Get:85 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB]
Get:86 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB]
Get:87 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB]
Get:88 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB]
Get:89 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB]
Get:90 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.14-1 [38.5 kB]
Get:91 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2+b1 [54.8 kB]
Get:92 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2+b1 [35.6 kB]
Get:93 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB]
Get:94 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get:95 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get:96 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB]
Get:97 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB]
Get:98 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B]
Get:99 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b5 [143 kB]
Get:100 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB]
Get:101 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3+b2 [11.2 kB]
Get:102 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1+b2 [12.5 kB]
Get:103 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get:104 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB]
Get:105 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b3 [17.5 kB]
Get:106 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b2 [11.4 kB]
Get:107 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1+b2 [42.2 kB]
Get:108 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB]
Get:109 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b2 [99.3 kB]
Get:110 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b2 [102 kB]
Get:111 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B]
Get:112 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.39-1+b2 [57.6 kB]
Get:113 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-2 [26.9 kB]
Get:114 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b3 [24.7 kB]
Get:115 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b3 [8700 B]
Get:116 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b2 [13.0 kB]
Get:117 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-2 [173 kB]
Get:118 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB]
Get:119 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b3 [72.8 kB]
Get:120 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2+b2 [20.2 kB]
Get:121 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.18-1 [114 kB]
Get:122 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB]
Get:123 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.89+ds-1+b1 [35.0 kB]
Get:124 http://localhost:3142/debian sid/main amd64 plzip amd64 1.11-1 [63.9 kB]
Get:125 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB]
Get:126 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB]
Get:127 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get:128 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB]
Get:129 http://localhost:3142/debian sid/main amd64 lintian all 2.117.0 [1052 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up libapt-pkg-perl (0.1.40+b5) ...
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Setting up plzip (1.11-1) ...
update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode
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Setting up libcpanel-json-xs-perl:amd64 (4.37-1+b2) ...
Setting up libhtml-tagset-perl (3.24-1) ...
Setting up libdevel-size-perl (0.83-2+b3) ...
Setting up unzip (6.0-28) ...
Setting up libsqlite3-0:amd64 (3.45.2-1) ...
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Setting up libyaml-libyaml-perl (0.89+ds-1+b1) ...
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Setting up libencode-locale-perl (1.05-3) ...
Setting up libassuan0:amd64 (2.5.6-1) ...
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Setting up liblist-utilsby-perl (0.12-2) ...
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Setting up lzop (1.04-2) ...
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Setting up libipc-run3-perl (0.049-1) ...
Setting up libregexp-wildcards-perl (1.05-3) ...
Setting up libaliased-perl (0.34-3) ...
Setting up netbase (6.4) ...
Setting up libstrictures-perl (2.000006-1) ...
Setting up libsub-quote-perl (2.006008-1) ...
Setting up libdevel-stacktrace-perl (2.0500-1) ...
Setting up libclass-xsaccessor-perl (1.19-4+b3) ...
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Setting up libterm-readkey-perl (2.38-2+b3) ...
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Setting up openssl (3.2.1-3) ...
Setting up libtext-levenshteinxs-perl (0.03-5+b3) ...
Setting up libperlio-gzip-perl (0.20-1+b3) ...
Setting up readline-common (8.2-4) ...
Setting up libhtml-html5-entities-perl (0.004-3) ...
Setting up libsereal-decoder-perl (5.004+ds-1+b2) ...
Setting up libmarkdown2:amd64 (2.2.7-2+b1) ...
Setting up liburi-perl (5.28-1) ...
Setting up iso-codes (4.16.0-1) ...
Setting up libnet-ipv6addr-perl (1.02-1) ...
Setting up libdata-validate-ip-perl (0.31-1) ...
Setting up libemail-address-xs-perl (1.05-1+b3) ...
Setting up libnet-ssleay-perl:amd64 (1.94-1+b1) ...
Setting up libhttp-date-perl (6.06-1) ...
Setting up libfile-basedir-perl (0.09-2) ...
Setting up libfile-listing-perl (6.16-1) ...
Setting up libnet-http-perl (6.23-1) ...
Setting up libtext-markdown-discount-perl (0.16-1+b2) ...
Setting up libexception-class-perl (1.45-1) ...
Setting up libdevel-callchecker-perl:amd64 (0.008-2+b2) ...
Setting up ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
146 added, 0 removed; done.
Setting up libdata-validate-uri-perl (0.07-3) ...
Setting up libdata-optlist-perl (0.114-1) ...
Setting up libreadline8t64:amd64 (8.2-4) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libhtml-parser-perl:amd64 (3.82-1) ...
Setting up gpgconf (2.2.40-3) ...
Setting up libio-socket-ssl-perl (2.085-1) ...
Setting up gpg (2.2.40-3) ...
Setting up libsub-exporter-perl (0.990-1) ...
Setting up libhttp-message-perl (6.45-1) ...
Setting up libhtml-form-perl (6.11-1) ...
Setting up libiterator-perl (0.03+ds1-2) ...
Setting up libhttp-negotiate-perl (6.01-2) ...
Setting up libiterator-util-perl (0.02+ds1-2) ...
Setting up libhttp-cookies-perl (6.11-1) ...
Setting up libhtml-tree-perl (5.07-3) ...
Setting up libparams-classify-perl:amd64 (0.015-2+b3) ...
Setting up libcgi-pm-perl (4.64-1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libconst-fast-perl (0.014-2) ...
Setting up libdata-dpath-perl (0.59-1) ...
Setting up libmodule-implementation-perl (0.09-2) ...
Setting up libpackage-stash-perl (0.40-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up liblist-someutils-perl (0.59-1) ...
Setting up libmoox-aliases-perl (0.001006-2) ...
Setting up libb-hooks-endofscope-perl (0.28-1) ...
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up libwww-perl (6.77-1) ...
Setting up libhtml-tokeparser-simple-perl (3.16-4) ...
Setting up libwww-mechanize-perl (2.18-1) ...
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up lintian (2.117.0) ...
Setting up sbuild-build-depends-lintian-dummy:armhf (0.invalid.0) ...
Processing triggers for libc-bin (2.37-17) ...
Processing triggers for man-db (2.12.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Running lintian...

I: Lintian run was successful.

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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: amd64
Build Profiles: cross nocheck
Build Type: any
Build-Space: 30196
Build-Time: 34
Distribution: unstable
Foreign Architectures: armhf
Host Architecture: armhf
Install-Time: 11
Job: kraken2_2.1.3-1
Lintian: pass
Machine Architecture: amd64
Package: kraken2
Package-Time: 56
Source-Version: 2.1.3-1
Space: 30196
Status: successful
Version: 2.1.3-1
--------------------------------------------------------------------------------
Finished at 2024-04-13T18:31:04Z
Build needed 00:00:56, 30196k disk space