sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | lambda-align 1.0.3-5 (arm64) Tue, 21 May 2019 18:08:08 +0000 | +==============================================================================+ Package: lambda-align Version: 1.0.3-5 Source Version: 1.0.3-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-58a594e3-d25e-4b6b-9e24-de1a7bdeb5e3' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [247 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-21-0819.58.pdiff [1151 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-21-1419.31.pdiff [8423 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-05-21-1419.31.pdiff [8423 B] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-21-0819.58.pdiff [2183 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-21-1419.31.pdiff [8078 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-05-21-1419.31.pdiff [8078 B] Get:8 http://debian.oregonstate.edu/debian unstable/main arm64 Packages [8118 kB] Fetched 8441 kB in 2s (4283 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: e2fsprogs libcom-err2 libext2fs2 libss2 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 985 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://debian.oregonstate.edu/debian unstable/main amd64 libext2fs2 amd64 1.45.1-3 [246 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 e2fsprogs amd64 1.45.1-3 [595 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libcom-err2 amd64 1.45.1-3 [69.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libss2 amd64 1.45.1-3 [74.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 985 kB in 0s (17.2 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../libext2fs2_1.45.1-3_amd64.deb ... Unpacking libext2fs2:amd64 (1.45.1-3) over (1.45.1-2) ... Setting up libext2fs2:amd64 (1.45.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.45.1-3_amd64.deb ... Unpacking e2fsprogs (1.45.1-3) over (1.45.1-2) ... Preparing to unpack .../libcom-err2_1.45.1-3_amd64.deb ... Unpacking libcom-err2:amd64 (1.45.1-3) over (1.45.1-2) ... Preparing to unpack .../libss2_1.45.1-3_amd64.deb ... Unpacking libss2:amd64 (1.45.1-3) over (1.45.1-2) ... Setting up libcom-err2:amd64 (1.45.1-3) ... Setting up libss2:amd64 (1.45.1-3) ... Setting up e2fsprogs (1.45.1-3) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'lambda-align' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lambda-align.git Please use: git clone https://salsa.debian.org/med-team/lambda-align.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 333 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (dsc) [2154 B] Get:2 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (tar) [323 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main lambda-align 1.0.3-5 (diff) [8000 B] Fetched 333 kB in 0s (7200 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/lambda-align-cm1u1Q/lambda-align-1.0.3' with '<>' I: NOTICE: Log filtering will replace 'build/lambda-align-cm1u1Q' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-Oq54qZ/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Oq54qZ/apt_archive ./ Sources [362 B] Get:5 copy:/<>/resolver-Oq54qZ/apt_archive ./ Packages [451 B] Fetched 1770 B in 0s (98.7 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-arm64-cross libgcc1-dbg-arm64-cross libgomp1-dbg-arm64-cross libitm1-dbg-arm64-cross libatomic1-dbg-arm64-cross libasan5-dbg-arm64-cross liblsan0-dbg-arm64-cross libtsan0-dbg-arm64-cross libubsan1-dbg-arm64-cross libmpx2-dbg-arm64-cross libquadmath0-dbg-arm64-cross manpages-dev autoconf automake libtool flex bison gdb-aarch64-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-aarch64-linux-gnu cpp-8-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 dpkg-cross file g++-8-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-8-aarch64-linux-gnu gcc-8-aarch64-linux-gnu-base gcc-8-cross-base gcc-aarch64-linux-gnu libasan5-arm64-cross libatomic1-arm64-cross libc6-arm64-cross libc6-dev-arm64-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-arm64-cross libgcc1-arm64-cross libgomp1-arm64-cross libicu63 libio-string-perl libitm1-arm64-cross liblocale-gettext-perl liblsan0-arm64-cross libmagic-mgc libmagic1 libstdc++-8-dev-arm64-cross libstdc++6-arm64-cross libtsan0-arm64-cross libubsan1-arm64-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-arm64-cross sbuild-build-depends-core-dummy:arm64 sensible-utils ucf 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 161 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-aarch64-linux-gnu amd64 2.31.1-16 [2905 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu-base amd64 8.3.0-7cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-aarch64-linux-gnu amd64 8.3.0-7cross1 [6241 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-aarch64-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-arm64-cross all 2.28-10cross2 [1312 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-arm64-cross all 1:8.3.0-7cross1 [34.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-arm64-cross all 8.3.0-7cross1 [66.2 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-arm64-cross all 8.3.0-7cross1 [23.6 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-arm64-cross all 8.3.0-7cross1 [8624 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-arm64-cross all 8.3.0-7cross1 [325 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-arm64-cross all 8.3.0-7cross1 [322 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-arm64-cross all 8.3.0-7cross1 [117 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-arm64-cross all 8.3.0-7cross1 [255 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-arm64-cross all 8.3.0-7cross1 [110 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-arm64-cross all 8.3.0-7cross1 [835 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-aarch64-linux-gnu amd64 8.3.0-7cross1 [6677 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-aarch64-linux-gnu amd64 4:8.3.0-1 [1456 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-arm64-cross all 4.19.28-2cross2 [1225 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-arm64-cross all 2.28-10cross2 [2323 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-arm64-cross all 8.3.0-7cross1 [1484 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-aarch64-linux-gnu amd64 8.3.0-7cross1 [6813 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 g++-aarch64-linux-gnu amd64 4:8.3.0-1 [1176 B] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-arm64 all 12.6 [6572 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (54.9 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11942 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Preparing to unpack .../31-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../32-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../33-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../34-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../35-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../36-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../37-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../38-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../39-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../40-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../41-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../42-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../43-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../44-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-arm64. Preparing to unpack .../45-crossbuild-essential-arm64_12.6_all.deb ... Unpacking crossbuild-essential-arm64 (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:arm64. Preparing to unpack .../46-sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-7cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up binutils-aarch64-linux-gnu (2.31.1-16) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up gcc-8-aarch64-linux-gnu-base:amd64 (8.3.0-7cross1) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up libc6-arm64-cross (2.28-10cross2) ... Setting up cpp-8-aarch64-linux-gnu (8.3.0-7cross1) ... Setting up libitm1-arm64-cross (8.3.0-7cross1) ... Setting up linux-libc-dev-arm64-cross (4.19.28-2cross2) ... Setting up sensible-utils (0.0.12) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libatomic1-arm64-cross (8.3.0-7cross1) ... Setting up libgcc1-arm64-cross (1:8.3.0-7cross1) ... Setting up libgomp1-arm64-cross (8.3.0-7cross1) ... Setting up libc6-dev-arm64-cross (2.28-10cross2) ... Setting up libstdc++6-arm64-cross (8.3.0-7cross1) ... Setting up cpp-aarch64-linux-gnu (4:8.3.0-1) ... Setting up ucf (3.0038+nmu1) ... Setting up liblsan0-arm64-cross (8.3.0-7cross1) ... Setting up libubsan1-arm64-cross (8.3.0-7cross1) ... Setting up libtsan0-arm64-cross (8.3.0-7cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-arm64-cross (8.3.0-7cross1) ... Setting up libgcc-8-dev-arm64-cross (8.3.0-7cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-8-aarch64-linux-gnu (8.3.0-7cross1) ... Setting up libstdc++-8-dev-arm64-cross (8.3.0-7cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-aarch64-linux-gnu (4:8.3.0-1) ... Setting up g++-8-aarch64-linux-gnu (8.3.0-7cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up g++-aarch64-linux-gnu (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-arm64 (12.6) ... Setting up sbuild-build-depends-core-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-Oq54qZ/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Oq54qZ/apt_archive ./ Sources [484 B] Get:5 copy:/<>/resolver-Oq54qZ/apt_archive ./ Packages [569 B] Fetched 2016 B in 0s (109 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:arm64 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:arm64. (Reading database ... 15222 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:arm64 (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 12~), libseqan2-dev, cmake, zlib1g-dev, libbz2-dev, openssl dpkg-deb: building package 'sbuild-build-depends-lambda-align-dummy' in '/<>/resolver-Oq54qZ/apt_archive/sbuild-build-depends-lambda-align-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lambda-align-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Oq54qZ/apt_archive ./ Sources [670 B] Get:5 copy:/<>/resolver-Oq54qZ/apt_archive ./ Packages [746 B] Fetched 2379 B in 0s (124 kB/s) Reading package lists... Reading package lists... Install lambda-align build dependencies (apt-based resolver) ------------------------------------------------------------ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libatomic1:arm64 libbsd0 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-dev:arm64 libcroco3 libcurl4 libelf1 libexpat1 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libglib2.0-0 libgomp1:arm64 libgssapi-krb5-2 libitm1:arm64 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblsan0:arm64 libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libsigsegv2 libssh2-1 libssl1.1 libstdc++-8-dev:arm64 libstdc++6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 libuv1 linux-libc-dev:arm64 lsb-base m4 man-db openssl po-debconf procps zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip glibc-doc:arm64 libc-l10n:arm64 locales:arm64 manpages-dev:arm64 krb5-doc krb5-user libstdc++-8-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser ca-certificates libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:arm64 libidn2-0:arm64 ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:arm64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan5:arm64 libatomic1:arm64 libbsd0 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-dev:arm64 libcroco3 libcurl4 libelf1 libexpat1 libfile-stripnondeterminism-perl libgcc-8-dev:arm64 libgcc1:arm64 libglib2.0-0 libgomp1:arm64 libgssapi-krb5-2 libitm1:arm64 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblsan0:arm64 libncurses6 libnghttp2-14 libpipeline1 libprocps7 libpsl5 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libseqan2-dev libsigsegv2 libssh2-1 libssl1.1 libstdc++-8-dev:arm64 libstdc++6:arm64 libtool libtsan0:arm64 libubsan1:arm64 libuchardet0 libuv1 linux-libc-dev:arm64 lsb-base m4 man-db openssl po-debconf procps sbuild-build-depends-lambda-align-dummy:arm64 zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. Need to get 31.3 MB of archives. After this operation, 145 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ sbuild-build-depends-lambda-align-dummy 0.invalid.0 [904 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.3.3-4 [314 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5support0 amd64 1.17-2 [65.6 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libk5crypto3 amd64 1.17-2 [121 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-2 [1530 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libkrb5-3 amd64 1.17-2 [368 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-2 [158 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1 [69.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1 [106 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3 [224 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.37.0-1 [83.3 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.64.0-3 [331 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.6-1 [105 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.24.1-1 [110 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main arm64 gcc-8-base arm64 8.3.0-7 [191 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc1 arm64 1:8.3.0-7 [34.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main arm64 libc6 arm64 2.28-10 [2521 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++6 arm64 8.3.0-7 [363 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main arm64 libasan5 arm64 8.3.0-7 [327 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main arm64 libatomic1 arm64 8.3.0-7 [8804 B] Get:60 http://debian.oregonstate.edu/debian unstable/main arm64 libbz2-1.0 arm64 1.0.6-9 [45.3 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main arm64 linux-libc-dev arm64 4.19.37-3 [1164 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main arm64 libc6-dev arm64 2.28-10 [2324 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main arm64 libbz2-dev arm64 1.0.6-9 [30.9 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main arm64 libgomp1 arm64 8.3.0-7 [67.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main arm64 libitm1 arm64 8.3.0-7 [24.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main arm64 liblsan0 arm64 8.3.0-7 [118 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main arm64 libtsan0 arm64 8.3.0-7 [262 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main arm64 libubsan1 arm64 8.3.0-7 [111 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main arm64 libgcc-8-dev arm64 8.3.0-7 [829 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libseqan2-dev all 2.4.0+dfsg-11 [1220 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main arm64 libstdc++-8-dev arm64 8.3.0-7 [1501 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 openssl amd64 1.1.1b-2 [840 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g arm64 1:1.2.11.dfsg-1 [89.3 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1 [210 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 31.3 MB in 1s (61.6 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15222 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libncurses6:amd64. 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Setting up autotools-dev (20180224.1) ... Setting up libuv1:amd64 (1.24.1-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:arm64 (8.3.0-7) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libk5crypto3:amd64 (1.17-2) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-1) ... Setting up librhash0:amd64 (1.3.8-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:amd64 (1.17-2) ... Setting up openssl (1.1.1b-2) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-2) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libcurl4:amd64 (7.64.0-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.13.4-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:arm64 (2.28-10) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libc6-dev:arm64 (2.28-10) ... Setting up libbz2-1.0:arm64 (1.0.6-9) ... Setting up libitm1:arm64 (8.3.0-7) ... Setting up libbz2-dev:arm64 (1.0.6-9) ... Setting up libgcc1:arm64 (1:8.3.0-7) ... Setting up debhelper (12.1.1) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-1) ... Setting up libgomp1:arm64 (8.3.0-7) ... Setting up libatomic1:arm64 (8.3.0-7) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1) ... Setting up libstdc++6:arm64 (8.3.0-7) ... Setting up liblsan0:arm64 (8.3.0-7) ... Setting up libtsan0:arm64 (8.3.0-7) ... Setting up libasan5:arm64 (8.3.0-7) ... Setting up libubsan1:arm64 (8.3.0-7) ... Setting up libgcc-8-dev:arm64 (8.3.0-7) ... Setting up libstdc++-8-dev:arm64 (8.3.0-7) ... Setting up sbuild-build-depends-lambda-align-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-arm64-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-arm64-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-3 Package versions: adduser_3.118 apt_1.8.1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-aarch64-linux-gnu_2.31.1-16 binutils-common_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 cmake_3.13.4-1 cmake-data_3.13.4-1 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-aarch64-linux-gnu_8.3.0-7cross1 cpp-aarch64-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-arm64_12.6 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.6 dpkg-cross_2.6.15-2 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.1-3 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-aarch64-linux-gnu_8.3.0-7cross1 g++-aarch64-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-aarch64-linux-gnu_8.3.0-7cross1 gcc-8-aarch64-linux-gnu-base_8.3.0-7cross1 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-aarch64-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.1 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-4 libasan5_8.3.0-7 libasan5-arm64-cross_8.3.0-7cross1 libatomic1_8.3.0-7 libatomic1-arm64-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-arm64-cross_2.28-10cross2 libc6-dev_2.28-10 libc6-dev-arm64-cross_2.28-10cross2 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.1-3 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcurl4_7.64.0-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.6 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.45.1-3 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-7 libgcc-8-dev-arm64-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-arm64-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-3 libgomp1_8.3.0-7 libgomp1-arm64-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libgssapi-krb5-2_1.17-2 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 libitm1-arm64-cross_8.3.0-7cross1 libjsoncpp1_1.7.4-3 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkrb5-3_1.17-2 libkrb5support0_1.17-2 libldap-2.4-2_2.4.47+dfsg-3 libldap-common_2.4.47+dfsg-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblsan0-arm64-cross_8.3.0-7cross1 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnghttp2-14_1.37.0-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libquadmath0_8.3.0-7 librhash0_1.3.8-1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libseqan2-dev_2.4.0+dfsg-11 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.1-3 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1b-2 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-arm64-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-arm64-cross_8.3.0-7cross1 libsystemd0_241-4 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libtsan0-arm64-cross_8.3.0-7cross1 libubsan1_8.3.0-7 libubsan1-arm64-cross_8.3.0-7cross1 libuchardet0_0.0.6-3 libudev1_241-4 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libuv1_1.24.1-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-3 linux-libc-dev-arm64-cross_4.19.28-2cross2 login_1:4.5-1.1 lsb-base_10.2019051400 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 openssl_1.1.1b-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 procps_2:3.3.15-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-lambda-align-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jan 22 10:22:34 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./lambda-align_1.0.3-5.dsc dpkg-source: info: extracting lambda-align in /<> dpkg-source: info: unpacking lambda-align_1.0.3.orig.tar.gz dpkg-source: info: unpacking lambda-align_1.0.3-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying set-seqan-cmake-dir.patch dpkg-source: info: applying force-link-rt-pthread.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-58a594e3-d25e-4b6b-9e24-de1a7bdeb5e3 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package lambda-align dpkg-buildpackage: info: source version 1.0.3-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --builddirectory=build debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f *.1 dh_auto_clean -- make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--builddirectory=build dh_clean -O--builddirectory=build debian/rules build-arch dh build-arch --builddirectory=build dh_update_autotools_config -a -O--builddirectory=build dh_autoreconf -a -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=aarch64 -DCMAKE_C_COMPILER=aarch64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=aarch64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/aarch64-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/aarch64-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DLAMBDA_NATIVE_BUILD=OFF -DLAMBDA_MMAPPED_DB=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo .. Compiler Detection -- The CXX compiler identification is GNU 8.3.0 -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- Check for working CXX compiler: /usr/bin/aarch64-linux-gnu-g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done Dependency detection -- These dependencies where found: OPENMP TRUE -fopenmp ZLIB TRUE 1.2.11 BZIP2 TRUE 1.0.6 SEQAN TRUE 2.4.0 -- The requirements where met. Build configuration -- LAMBDA version is: 1.0.2 -- The following options are selected for the build: LAMBDA_FASTBUILD OFF LAMBDA_LINGAPS_OPT OFF LAMBDA_MMAPPED_DB ON LAMBDA_NATIVE_BUILD OFF LAMBDA_STATIC_BUILD OFF -- Run 'cmake -LH' to get a comment on each option. -- Remove CMakeCache.txt and re-run cmake with -DOPTIONNAME=ON|OFF to change an option. -- CMAKE_BUILD_TYPE is not "Release", your binaries will be slow. Setting up unit tests -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/build make[1]: Leaving directory '/<>' dh_auto_build -a -O--builddirectory=build cd build && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[1]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles /<>/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= Scanning dependencies of target lambda_indexer make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/<>/build' [ 25%] Building CXX object src/CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o cd /<>/build/src && /usr/bin/aarch64-linux-gnu-g++ -DCMAKE_BUILD_TYPE=\"RelWithDebInfo\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -o CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -c /<>/src/lambda_indexer.cpp In file included from /<>/src/misc.hpp:34, from /<>/src/lambda_indexer.hpp:35, from /<>/src/lambda_indexer.cpp:31: /<>/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] setDate(parser, __DATE__); ^~~~~~~~ /<>/src/options.hpp: In function 'void getCwd(TString&) [with TString = std::__cxx11::basic_string]': /<>/src/options.hpp:173:11: warning: ignoring return value of 'char* getcwd(char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] getcwd(cwd, 1000); ~~~~~~^~~~~~~~~~~ [ 50%] Linking CXX executable ../bin/lambda_indexer cd /<>/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda_indexer.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda_indexer.dir/lambda_indexer.cpp.o -o ../bin/lambda_indexer -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread make[3]: Leaving directory '/<>/build' [ 50%] Built target lambda_indexer make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= Scanning dependencies of target lambda make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Entering directory '/<>/build' [ 75%] Building CXX object src/CMakeFiles/lambda.dir/lambda.cpp.o cd /<>/build/src && /usr/bin/aarch64-linux-gnu-g++ -DCMAKE_BUILD_TYPE=\"RelWithDebInfo\" -DLAMBDA_MMAPPED_DB=1 -DSEQAN_APP_VERSION=\"1.0.2\" -DSEQAN_DATE=\"\" -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP="1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER" -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"\" -DSEQAN_VERSION_STRING=\"2.4.0\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -o CMakeFiles/lambda.dir/lambda.cpp.o -c /<>/src/lambda.cpp In file included from /<>/src/lambda.cpp:32: /<>/src/options.hpp:323:21: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] setDate(parser, __DATE__); ^~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)0, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)0]' /<>/src/lambda.cpp:168:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score >; seqan::BlastProgram p = (seqan::BlastProgram)0; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:145:106: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)0>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' /<>/src/lambda.cpp:147:107: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)0]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)1, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)1]' /<>/src/lambda.cpp:175:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)1; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)2, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)2]' /<>/src/lambda.cpp:180:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)2; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)3, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)3]' /<>/src/lambda.cpp:186:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)3; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:219:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::IndexSa<>, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::IndexSa<>; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:316:35: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp: In instantiation of 'int computeBlastMatch(TBlastMatch&, const typename TLocalHolder::TMatch&, TLocalHolder&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >; typename TLocalHolder::TMatch = Match > > >]': /<>/src/lambda.hpp:1513:45: required from 'int iterateMatches(TLocalHolder&) [with TLocalHolder = LocalDataHolder > >, seqan::FMIndex, seqan::Tag, (seqan::BlastProgram)4, (seqan::BlastTabularSpec)1>, seqan::Tag >]' /<>/src/lambda.cpp:462:33: required from 'int realMain(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TIndexSpec = seqan::FMIndex; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; TOutFormat = seqan::Tag; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:323:36: required from 'int argConv4(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&, const TScoreExtension&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; TScoreExtension = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:266:24: required from 'int argConv3(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&, const TRedAlph&) [with TOutFormat = seqan::Tag; TRedAlph = seqan::SimpleType > >; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:221:28: required from 'int argConv2(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&, const seqan::BlastProgramSelector

&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1; seqan::BlastProgram p = (seqan::BlastProgram)4]' /<>/src/lambda.cpp:191:28: required from 'int argConv1(const LambdaOptions&, const TOutFormat&, const seqan::BlastTabularSpecSelector&) [with TOutFormat = seqan::Tag; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' /<>/src/lambda.cpp:149:104: required from here /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:34: /<>/src/lambda.hpp:1282:22: warning: 'double seqan::computeEValue(TBlastMatch&, seqan::BlastIOContext&) [with TBlastMatch = seqan::BlastMatch, seqan::Alloc<> >, seqan::InfixSegment>, seqan::Tag >, seqan::Gaps, seqan::MMap<> >, seqan::InfixSegment>, seqan::Tag >, unsigned int, seqan::Segment >, seqan::InfixSegment>, seqan::Segment >, seqan::InfixSegment>, std::vector >, seqan::String > >; TScore = seqan::Score, seqan::ScoreSpecSelectable> >; seqan::BlastProgram p = (seqan::BlastProgram)4; seqan::BlastTabularSpec h = (seqan::BlastTabularSpec)1]' is deprecated: Use the interface with an explicit query length parameter instead (use the record's member). [-Wdeprecated-declarations] computeEValue(bm, context(lH.gH.outfile)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/seqan/blast.h:64, from /<>/src/output.hpp:25, from /<>/src/lambda.cpp:31: /usr/include/seqan/blast/blast_statistics.h:1176:1: note: declared here computeEValue(TBlastMatch & match, ^~~~~~~~~~~~~ In file included from /<>/src/lambda.cpp:32: /<>/src/options.hpp: In function 'void getCwd(TString&) [with TString = std::__cxx11::basic_string]': /<>/src/options.hpp:173:11: warning: ignoring return value of 'char* getcwd(char*, size_t)', declared with attribute warn_unused_result [-Wunused-result] getcwd(cwd, 1000); ~~~~~~^~~~~~~~~~~ [100%] Linking CXX executable ../bin/lambda cd /<>/build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/lambda.dir/link.txt --verbose=1 /usr/bin/aarch64-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fno-omit-frame-pointer -fopenmp -Wno-vla -flto=32 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--whole-archive -lpthread -Wl,--no-whole-archive -rdynamic CMakeFiles/lambda.dir/lambda.cpp.o -o ../bin/lambda -lrt -lz -lbz2 -lrt -lpthread -lz -lbz2 -lpthread make[3]: Leaving directory '/<>/build' [100%] Built target lambda make[2]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[1]: Leaving directory '/<>/build' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --builddirectory=build dh_testroot -a -O--builddirectory=build dh_prep -a -O--builddirectory=build dh_auto_install -a -O--builddirectory=build cd build && make -j1 install DESTDIR=/<>/debian/lambda-align AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles /<>/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda_indexer.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda_indexer.dir/build.make src/CMakeFiles/lambda_indexer.dir/build make[3]: Entering directory '/<>/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda_indexer.dir/build'. make[3]: Leaving directory '/<>/build' [ 50%] Built target lambda_indexer make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/depend make[3]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/src /<>/build /<>/build/src /<>/build/src/CMakeFiles/lambda.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/build' make -f src/CMakeFiles/lambda.dir/build.make src/CMakeFiles/lambda.dir/build make[3]: Entering directory '/<>/build' make[3]: Nothing to be done for 'src/CMakeFiles/lambda.dir/build'. make[3]: Leaving directory '/<>/build' [100%] Built target lambda make[2]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/build' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /<>/debian/lambda-align/usr/bin/lambda -- Installing: /<>/debian/lambda-align/usr/bin/lambda_indexer -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE-BSD.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/LICENSE-GPL3.rst -- Installing: /<>/debian/lambda-align/usr/share/doc/lambda/README.rst make[1]: Leaving directory '/<>/build' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install find debian -name "LICENSE*.rst" -delete make[1]: Leaving directory '/<>' dh_installdocs -a -O--builddirectory=build dh_installchangelogs -a -O--builddirectory=build debian/rules override_dh_installman make[1]: Entering directory '/<>' ./build/bin/lambda --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda.1 /bin/sh: 1: ./build/bin/lambda: Exec format error ./build/bin/lambda_indexer --export-help man \ | sed -r 's/(number of threads.*) Default:.*/\1/g' \ | sed -r 's/(defaults to working directory.*) Default:.*/\1/g' \ | sed -r 's/\(Git commit +\)//g' > lambda_indexer.1 /bin/sh: 1: ./build/bin/lambda_indexer: Exec format error dh_installman -- make[1]: Leaving directory '/<>' dh_installinit -a -O--builddirectory=build dh_installsystemduser -a -O--builddirectory=build dh_perl -a -O--builddirectory=build dh_link -a -O--builddirectory=build dh_strip_nondeterminism -a -O--builddirectory=build dh_compress -a -O--builddirectory=build dh_fixperms -a -O--builddirectory=build dh_missing -a -O--builddirectory=build dh_dwz -a -O--builddirectory=build dh_strip -a -O--builddirectory=build dh_makeshlibs -a -O--builddirectory=build dh_shlibdeps -a -O--builddirectory=build dh_installdeb -a -O--builddirectory=build dh_gencontrol -a -O--builddirectory=build dh_md5sums -a -O--builddirectory=build dh_builddeb -a -O--builddirectory=build dpkg-deb: building package 'lambda-align' in '../lambda-align_1.0.3-5_arm64.deb'. dpkg-deb: building package 'lambda-align-dbgsym' in '../lambda-align-dbgsym_1.0.3-5_arm64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../lambda-align_1.0.3-5_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-05-21T18:12:56Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-Oq54qZ/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lambda-align-dummy sbuild-build-depends-lintian-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ InRelease Get:2 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-Oq54qZ/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-Oq54qZ/apt_archive ./ Sources [792 B] Get:5 copy:/<>/resolver-Oq54qZ/apt_archive ./ Packages [861 B] Fetched 2616 B in 0s (139 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded. Need to get 6231 kB of archives. After this operation, 16.6 MB of additional disk space will be used. Get:1 copy:/<>/resolver-Oq54qZ/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.13.0 [1175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6231 kB in 0s (29.2 MB/s) Selecting previously unselected package netbase. (Reading database ... 21708 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-2_amd64.deb ... Unpacking gpgconf (2.2.13-2) ... Selecting previously unselected package libsqlite3-0:amd64. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ lambda-align_1.0.3-5_arm64.changes: ----------------------------------- Format: 1.8 Date: Tue, 22 Jan 2019 11:12:44 +0100 Source: lambda-align Binary: lambda-align lambda-align-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.0.3-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: lambda-align - Local Aligner for Massive Biological DatA Changes: lambda-align (1.0.3-5) unstable; urgency=medium . * Team upload. * Watch file reports only version 1 * Document choice of version 1 in README.Debian * debhelper 12 * CMAKE_BUILD_TYPE=RelWithDebInfo to get debug info Checksums-Sha1: 4b46897a305b1335d3656ad4bcd1556545bc3949 18922620 lambda-align-dbgsym_1.0.3-5_arm64.deb 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lambda-align Architecture: arm64 Version: 1.0.3-5 Checksums-Md5: c6385032c15711b5e5671914d88f3de0 18922620 lambda-align-dbgsym_1.0.3-5_arm64.deb 883c59857dacb587d5a00cfbb434aac5 903356 lambda-align_1.0.3-5_arm64.deb Checksums-Sha1: 4b46897a305b1335d3656ad4bcd1556545bc3949 18922620 lambda-align-dbgsym_1.0.3-5_arm64.deb 24cee47aafe14b9ecef1e7e03e2f219ac88fcd6c 903356 lambda-align_1.0.3-5_arm64.deb Checksums-Sha256: 352210f5596611109ba6ddece8d70f5cd4e59d621c0c582b3d58b8aeeeb38b62 18922620 lambda-align-dbgsym_1.0.3-5_arm64.deb 11b78137e5d32d184669372c3a60ee8035d826a97bd61cbd07969a31fdca43d2 903356 lambda-align_1.0.3-5_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 21 May 2019 18:12:55 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), 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libseqan2-dev (= 2.4.0+dfsg-11), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1b-2), libstdc++-8-dev (= 8.3.0-7), libstdc++6 (= 8.3.0-7), libsystemd0 (= 241-4), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-7), libubsan1 (= 8.3.0-7), libuchardet0 (= 0.0.6-3), libudev1 (= 241-4), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libuv1 (= 1.24.1-1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.37-3), login (= 1:4.5-1.1), lsb-base (= 10.2019051400), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), openssl (= 1.1.1b-2), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), procps (= 2:3.3.15-2), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1548151964" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ lambda-align-dbgsym_1.0.3-5_arm64.deb ------------------------------------- new Debian package, version 2.0. size 18922620 bytes: control archive=644 bytes. 433 bytes, 12 lines control 302 bytes, 3 lines md5sums Package: lambda-align-dbgsym Source: lambda-align Version: 1.0.3-5 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 21130 Depends: lambda-align (= 1.0.3-5) Section: debug Priority: optional Description: debug symbols for lambda-align Build-Ids: 6328d1462a9dd780f4e306a6063f4c96138984c0 7664d7b33c194f104475a685e3cea1c27b85b285 drwxr-xr-x root/root 0 2019-01-22 10:12 ./ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/63/ -rw-r--r-- root/root 6639600 2019-01-22 10:12 ./usr/lib/debug/.build-id/63/28d1462a9dd780f4e306a6063f4c96138984c0.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.build-id/76/ -rw-r--r-- root/root 14208048 2019-01-22 10:12 ./usr/lib/debug/.build-id/76/64d7b33c194f104475a685e3cea1c27b85b285.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 774560 2019-01-22 10:12 ./usr/lib/debug/.dwz/aarch64-linux-gnu/lambda-align.debug drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda-align-dbgsym -> lambda-align lambda-align_1.0.3-5_arm64.deb ------------------------------ new Debian package, version 2.0. size 903356 bytes: control archive=1004 bytes. 795 bytes, 16 lines control 540 bytes, 8 lines md5sums Package: lambda-align Version: 1.0.3-5 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3753 Depends: libbz2-1.0, libc6 (>= 2.17), libgcc1 (>= 1:3.3.1), libgomp1 (>= 4.9), libstdc++6 (>= 7), zlib1g (>= 1:1.1.4) Suggests: cwl-runner Section: science Priority: optional Homepage: https://seqan.github.io/lambda Description: Local Aligner for Massive Biological DatA Lambda is a local biosequence aligner optimized for many query sequences and searches in protein space. It is compatible to the de facto standard tool BLAST, but often outperforms the best currently available alternatives at reproducing BLAST’s results and is the fastest compared with the current state of the art at comparable levels of sensitivity. drwxr-xr-x root/root 0 2019-01-22 10:12 ./ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/bin/ -rwxr-xr-x root/root 2620960 2019-01-22 10:12 ./usr/bin/lambda -rwxr-xr-x root/root 1199560 2019-01-22 10:12 ./usr/bin/lambda_indexer drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda-align/ -rw-r--r-- root/root 375 2019-01-22 10:12 ./usr/share/doc/lambda-align/README.Debian -rw-r--r-- root/root 1336 2019-01-22 10:12 ./usr/share/doc/lambda-align/changelog.Debian.gz -rw-r--r-- root/root 2887 2019-01-22 10:12 ./usr/share/doc/lambda-align/copyright drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/doc/lambda/ -rw-r--r-- root/root 2236 2018-02-16 18:56 ./usr/share/doc/lambda/README.rst.gz drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-22 10:12 ./usr/share/man/man1/ -rw-r--r-- root/root 20 2019-01-22 10:12 ./usr/share/man/man1/lambda.1.gz -rw-r--r-- root/root 20 2019-01-22 10:12 ./usr/share/man/man1/lambda_indexer.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 375516 Build-Time: 248 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 27 Job: lambda-align_1.0.3-5 Lintian: pass Machine Architecture: amd64 Package: lambda-align Package-Time: 288 Source-Version: 1.0.3-5 Space: 375516 Status: successful Version: 1.0.3-5 -------------------------------------------------------------------------------- Finished at 2019-05-21T18:12:56Z Build needed 00:04:48, 375516k disk space